| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 3899722 | 106 (0.910) | 4 (0.040) | 4/240 | NT | 3.7% | coding (856/1170 nt) | yieL | putative xylanase |
| ? | NC_000913 | = 3899725 | 106 (0.950) | coding (853/1170 nt) | yieL | putative xylanase | |||||
| Rejected: Frequency below/above cutoff threshold. | |||||||||||
ACAACCACAGTAAAATTACGTAGTTGCTGGTTGATAGCTGCCGGATCGTTCAGTCGGGCCGCGACACCTTCATCCGGTACGGTTGTCGTGGTAACACCACTGAATGTGGCCAGCCAGCCAAAGCTTTCCAGATGATTCATTCCGGAAACCAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/3899571‑3899722‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑accagGCGCTGGTTTCCGGAATGAATCATCTGGAAAGCTTTGGCTGGCTGGCCACATTCAGTGGTGTTACCACGACAACCGTACCGGATGAAGGTGTCGCGGCCCGACTGAACGATCCGGCAGCTATCAACCAGCAACTACGTAATTTTACT < NC_000913/3899725‑3899579 ACAACCACAGTAAAATTACGTAGTTGCTGGTTGATAGCTGCCGGATCGTTCAGTCGGGCCGCGACACCTTCATCCGGTACGGTTGTCGTGGTAACACCACTGAATGTGGCCAGCCAGCCAAAGCTTTCCAGATGATACATTCCGGAAAC > 6:289761/1‑149 CAACCACAGTAAAATTACGTAGTTGCTGGTTGATAGCTGCCGGATCGTTCAGTCGGGCCGCGACACCTTCATCCGGTACGGTTGTCGTGGTAACACCACTGAATGTGGCCAGCCAGCCAAAGCTTTCCAGATGATTCATTCCGGAAACC < 4:521919/149‑1 AACCACAGTAAAATTACGTAGTTGCTGGTTGATAGCTGCCGGATCGTTCAGTCGGGCCGCGACACCTTCATCCGGTACGGTTGTCGTGGTAACACCACTGAATGTGGCCAGCCAGCCAAAGCTTTCCAGATGATTCATTCCGGAAACCA < 4:9575/149‑1 AACCACAGTAAAATTACGTAGTTGCTGGTTGATAGCTGCCGGATCGTTCAGTCGGGCCGCGACACCTTCATCCGGTACGGTTGTCGTGGTAACACCACTGAATGTGGCCAGCCAGCCAAAGCTTTCCAGATGATTCATTCCGGAAAC > 3:9575/1‑147 GATCGTTCAGTCGGGCCGCGACACCTTCATCCGGTACGGTTGTCGTGGTAACACCACTGAATGTGGCCAGCCAGCCAAAGCTTTCCAGATGATTCATTCCGGAAACCA < 3:375663/108‑1 GATCGTTCAGTCGGGCCGCGACACCTTCATCCGGTACGGTTGTCGTGGTAACACCACTGAATGTGGCCAGCCAGCCAAAGCTTTCCAGATGATTCATTCCGGAAACCA > 4:375663/1‑108 TCGTGGTAACACCACTGAATGTGGCCAGCCAGCCAAAGCTTTCCAGATGATTCATTCCGGAAACCAGGCGCTGGTTTCCGGAATGAATCATCTGGAAAGCTTTGGCTGGCTGGCCACCGTCAGg > 6:490186/1‑123 ACTGAATGTGGCCAGCCAGCCAAAGCTTTCCAGATGATTCATTCCGGAAACCAGCGCCTGGTTTCCGGAATGAATCATCTGGAAAGCTTTGGCTGGCTGGCCACATTCAGTGGTGTTGCCACGA > 5:490186/1‑124 ATTCATTCCGGAAACCAGCGCCTGGTTTCCGGAATGAATCATCTGGAAAGCTTTGGCTGGCTGGCCACATTCAGTGGTGTTACCACGACAACCGTACCG < 8:207293/99‑1 ATTCATTCCGGAAACCAGCGCCTGGTTTCCGGAATGAATCATCTGGAAAGCTTTGGCTGGCTGGCCACATTCAGTGGTGTTACCACGACAACCGTACCG > 7:207293/1‑99 CAGGCGCTGGTTTCCGGAATGAATCATCTGGAAAGCTTTGGCTGGCTGGCCACATTCAGTGGTGTTACCACGACAACCGTACCGGATGAAGGTGTCGCGGCCCGACTGAACGATCCGGCAGCTATCAACCAGCAACTACGTAATTTTgc > 1:251431/1‑147 CAGGCGCTGGTTTCCGGAATGAATCATCTGGAAAGCTTTGGCTGGCTGGCCACATTCAGTGGTGTTACCACGACAACCGTACCGGATGAAGGTGTCGCGGCCCGACTGAACGATCCGGCAGCTATCAACCAGCAACTACGTAATTTTAC > 3:452005/1‑149 CAGGCGCTGGTTTCCGGAATGAATCATCTGGAAAGCTTTGGCTGGCTGGCCACATTCAGTGGTGTTACCACGACAACCGTACCGGATGAAGGTGTCGCGGCCCGACTGAACGATCCGGCAGCTATCAACCAGCAACTACGTAATTTTAC < 2:94581/149‑1 CAGGCGCTGGTTTCCGGAATGAATCATCTGGAAAGCTTTGGCTGGCTGGCCACATTCAGTGGTGTTACCACGACAACCGTACCGGATGAAGGTGTCGC > 7:397092/1‑98 CAGGCGCTGGTTTCCGGAATGAATCATCTGGAAAGCTTTGGCTGGCTGGCCACATTCAGTGGTGTTACCACGACAACCGTACCGGATGAAGGTGTCGC < 8:397092/98‑1 AGGCGCTGGTTTCCGGAATGAATCATCTGGAAAGCTTTGGCTGGCTGGCCACATTCAGTGGTGTTACCACGACAACCGTACCGGATGAAGGTGTCGCGGCCCGACTGAACGATCCGGCAGCTATCAACCAGCAACTACGTAATTTTACT > 3:82861/1‑149 AGGCGCTGGTTTCCGGAATGAATCATCTGGAAAGCTTTGGCTGGCTGGCCACATTCAGTGGTGTTACCACGACAACCGTACCGGATGAAGGTGTCGCGGCCCGACTGAACGATCCGGCAGCTATCAACCAGCAACTACGTAATTTTACT < 7:340853/149‑1 AGGCGCTGGTTTCCGGAATGAATCATCTGGAAAGCTTTGGCTGGCTGGCCACATTCAGTGGTGTTACCACGACAACCGTACCGGATGAAGGTGTCGCGGCCCGACTGAACGATCCGGCAGCTATCAACCAGCAACTACGTAATTTTACT < 1:12349/149‑1 ACAACCACAGTAAAATTACGTAGTTGCTGGTTGATAGCTGCCGGATCGTTCAGTCGGGCCGCGACACCTTCATCCGGTACGGTTGTCGTGGTAACACCACTGAATGTGGCCAGCCAGCCAAAGCTTTCCAGATGATTCATTCCGGAAACCAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/3899571‑3899722‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑accagGCGCTGGTTTCCGGAATGAATCATCTGGAAAGCTTTGGCTGGCTGGCCACATTCAGTGGTGTTACCACGACAACCGTACCGGATGAAGGTGTCGCGGCCCGACTGAACGATCCGGCAGCTATCAACCAGCAACTACGTAATTTTACT < NC_000913/3899725‑3899579 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |