New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 2683325 =138 (1.180)3 (0.030) 3/234 NT 2.3% coding (463/1194 nt) yphH putative DNA‑binding transcriptional regulator
?NC_000913 2683372 = 124 (1.140)coding (510/1194 nt) yphH putative DNA‑binding transcriptional regulator
Rejected: Frequency below/above cutoff threshold.

Only 100 of 164 total aligned reads displayed.

GGTGAATTTGAGTATTTACAGATTGATGCACCGACGCCGCAGGCGCTGCTGTCCGAAATCGAAAAATGCTGGCATCGCCACCGTAAATTGTGGCCGGACCATACCATCAACCTGGCGTTGGCAATCCACGGTCAGGTTGATCCTGTGACCGGCGTGTCGCAAACCATGCCGCAAGCGCCGTGGACAACGCCGGTGGAGGTGAAATATCTGCTGGAAGAGAAGCTCGGCATTCGGGTGATGGTCGATAATGACTGCGTGATGCTGGCGCTGGCGGAGAAATGGCAAAATAATTCGCA  >  NC_000913/2683178‑2683473
                                                                                                                                                   |                                                                                                                                                    
gagccaatgccgtaatcaacgttgatcacgcagaaatcccgttcctgcgaattattttgccatttctccgccagcgccagcatcacgcagtcattatcgaccatcacccgaatgccgagcttctcttccagcagatatttcacctccAc                                                                                                                                                     <  4:15936‑M1/2‑1 (MQ=255)
 gTGAATTTGAGTATTTACAGATTGATGCACCGACGCCGCAGGCGCTGCTGTCCGAAATCGAAAAATGCTGGCATCGCCACCGTAAATTGTGGCCGGACCATACCATCAACCTGGCGTTGGCAATCCACGGTCAGGTTGATCCTGTGAcc                                                                                                                                                    >  7:99750/1‑149 (MQ=255)
  gccaatgccgtaatcaacgttgatcacgcagaaatcccgttcctgcgaattattttgccatttctccgccagcgccagcatcacgcagtcattatcgaccatcacccgaatgccgagcttctcttccagcagatatttcacctccACCg                                                                                                                                                   <  5:535980‑M1/4‑1 (MQ=255)
     aTTTGAGTATTTACAGATTGATGCACCGACGCCGCAGGCGCTGCTGTCCGAAATCGAAAAATGCTGGCATCGCCACCGTAAATTGTGGCCGGACCATACCATCAACCTGGCGTTGGCAATCCACGGTCAGGTTGATCCTGTGACCGGCg                                                                                                                                                <  7:378146/149‑1 (MQ=255)
       ttGAGTATTTACAGATTGATGCACCGACGCCGCAGGCGCTGCTGTCCGAAATCGAAAAATGCTGGCATCGCCACCGTAAATTGTGGCCGGACCATACCATCAACCTGGCGTTGGCAATCCACGGTCAGGTTGATCCTGTGACCGGCgtg                                                                                                                                              >  4:28560/1‑149 (MQ=255)
         gAGTATTTACAGATTGATGCACCGACGCCGCAGGCGCTGCTGTCCGAAATCGAAAAATGCTGGCATCGCCACCGTAAATTGTGGCCGGACCATACCATCAACCTGGCGTTGGCAATCCACGGTCAGGTTGATCCTGTGACCGGCgtgt                                                                                                                                             <  2:354979/148‑1 (MQ=255)
          aGTATTTACAGATTGATGCACCGACGCCGCAGGCGCTGCTGTCCGAAATCGAAAAATGCTGGCATCGCCACCGTAAATTGTGGCCGGACCATACCATCAACCTGGCGTTGGCAATCCACGGTCAGGTTGATCCTGTGACCGGCGTGTc                                                                                                                                            <  1:140634/148‑1 (MQ=255)
          aGTATTTACAGATTGATGCACCGACGCCGCAGGCGCTGCTGTCCGAAATCGAAAAATGCTGGCATCGCCACCGTAAATTGTGGCCGGACCATACCATCAACCTGGCGTTGGCAATCCACGGTCAGGTTGATCCTGTGACCGGCGTGTc                                                                                                                                            <  3:455324/148‑1 (MQ=255)
           gTATTTACAGATTGATGCACCGACGCCGCAGGCGCTGCTGTCCGAAATCGAAAAATGCTGGCATCGCCACCGTAAATTGTGGCCGGACCATACCATCAACCTGGCGTTGGCAATCCACGGTCAGGTTGATCCTGTGACCGGCGTGTCg                                                                                                                                           >  7:335259/1‑148 (MQ=255)
              tttACAGATTGATGCACCGACGCCGCAGGCGCTGCTGTCCGAAATCGAAAAATGCTGGCATCGCCACCGTAAATTGTGGCCGGACCATACCATCAACCTGGCGTTGGCAATCCACGGTCAGGTTGATCCTGTGACCGGCGTGTCGCaaa                                                                                                                                       >  2:344333/1‑149 (MQ=255)
                  cAGATTGATGCACCGACGCCGCAGGCGCTGCTGTCCGAAATCGAAAAATGCTGGCATCGCCACCGTAAATTGTGGCCGGACCATACCATCAACCTGGCGTTGGCAATCCACGGTCAGGTTGATCCTGTGACCGGCGTGTCGCAAACCa                                                                                                                                    <  8:284356/148‑1 (MQ=255)
                    gATTGATGCACCGACGCCGCAGGCGCTGCTGTCCGAAATCGAAAAATGCTGGCATCGCCACCGTAAATTGTGGCCGGACCATACCATCAACCTGGCGTTGGCAATCCACGGTCAGGTTGATCCTGTGACCGGCGTGTCGCAAACCATGc                                                                                                                                 <  3:378046/149‑1 (MQ=255)
                         aTGCACCGACGCCGCAGGCGCTGCTGTCCGAAATCGAAAAATGCTGGCATCGCCACCGTAAATTGTGTCCGGACCATACCATCAACCTGGCGTTGGCAATCCACGGTCAGGTTGATCCTGTGACCGGCGTGTCGCAAACCATGCCGCaa                                                                                                                            <  3:337794/149‑1 (MQ=255)
                              ccGACGCCGCAGGCGCTGCTGTCCGAAATCGAAAAATGCTGGCATCGCCACCGTAAATTGTGGCCGGACCATACCATCAACCTGGCGTTGGCAATCCACGGTCAGGTTGATCCTGTGAc                                                                                                                                                     <  1:313369/119‑1 (MQ=255)
                              ccGACGCCGCAGGCGCTGCTGTCCGAAATCGAAAAATGCTGGCATCGCCACCGTAAATTGTGGCCGGACCATACCATCAACCTGGCGTTGGCAATCCACGGTCAGGTTGATCCTGTGAc                                                                                                                                                     >  2:313369/1‑119 (MQ=255)
                              ccGACGCCGCAGGCGCTGCTGTCCGAAATCGAAAAATGCTGGCATCGCCACCGTAAATTGTGGCCGGACCATACCATCAACCTGGCGTTGGCAATCCACGGTCAGGTTGATCCTGTGACCGGCGTGTCGCAAACCATGCCGCAAGCGcc                                                                                                                       >  6:535980/1‑149 (MQ=255)
                                 aCGCCGCAGGCGCTGCTGTCCGAAATCGAAAAATGCTGGCATCGCCACCGTAAATTGTGGCCGGACCATACCATCAACCTGGCGTTGGCAATCCACGGTCAGGTTGATCCTGTGACCGGCGTGTCGCAAACCATGCCGCAAGCGCCATg                                                                                                                    >  2:57997/1‑149 (MQ=255)
                                  cgccgcAGGCGCTGCTGTCCGAAATCGAAAAATGCTGGCATCGCCACCGTAAATTGTGGCCGGACCATACCATCAACCTGGCGTTGGCAATCCACGGTCAGGTTGATCCCGTGACCGGCGTGTCGCaaa                                                                                                                                       <  8:21182/129‑1 (MQ=255)
                                      gcAGGCGCTGCTGTCCGAAATCGAAAAATGCTGGCATCGCCACCGTAAATTGTGGCCGGACCATACCATCAACCTGGCGTTGGCAATCCACGGTCAGGTTGATCCTGTGACCGGCGTGTGGCAAACCATGCCGCAAGCGCCGTGGACaa                                                                                                               >  8:146744/1‑149 (MQ=255)
                                            ctgcgaattattttgccatttctccgccagcgccagcatcacgcagtcattatcgaccatcacccgaatgccgagcttctcttccagcagatatttcacctccACCGGCGTGTCGCAAACCATGCCGCAAGCGCCGTGGACAACGCCgg                                                                                                         >  8:91574‑M1/104‑149 (MQ=255)
                                                 tgTCCGAAATCGAAAAATGCTGGCATCGCCACCGTAAATTGTGGCCGGACCATACCATCAACCTGGCGTTGGCAATCCACGGTCAGGTTGATCCTGTGACCGGCGTGTCGCAAACCATGCCGCAAGCGCCGTGGACAACGCCGGt                                                                                                        <  5:101687/145‑1 (MQ=255)
                                                   tCCGAAATCGAAAAATGCTGGCATCGCCACCGTAAATTGTGGCCGGACCATACCATCAACCTGGCGTTGGCAATCCACGGTCAGGTTGATCCTGTGACCGGCGTGTCGCAAACCATGCCGCAAGCGCCGTGGACaa                                                                                                               >  8:407924/1‑136 (MQ=255)
                                                   tCCGAAATCGAAAAATGCTGGCATCGCCACCGTAAATTGTGGCCGGACCATACCATCAACCTGGCGTTGGCAATCCACGGTCAGGTTGATCCTGTGACCGGCGTGTCGCAAACCATGCCGCAAGCGCCGTGGACAACGCCGGTGGAg                                                                                                    <  1:95361/147‑1 (MQ=255)
                                                     cGAAATCGAAAAATGCTGGCATCGCCACCGTAAATTGTGGCCGGACCATACCATCAACCTGGCGTTGGCAATCCACGGTCAGGTTGATCCTGTGACCGGCGTGTCGCAAACCATGCCGCAAGCGCCGTGGACAACGCCGGTGGAGGTGa                                                                                                <  4:476705/149‑1 (MQ=255)
                                                     cGAAATCGAAAAATGCTGGCATCGCCACCGTAAATTGTGGCCGGACCATACCATCAACCTGGCGTTGGCAATCCACGGTCAGGTTGATCCTGTGACCGGCGTGTCGCAAACCATGCCGCAAGCGCCGTGGACAACGCCGGTGGAGGTGa                                                                                                <  3:31714/149‑1 (MQ=255)
                                                      gAAATCGAAAAATGCTGGCATCGCCACCGTAAATTGTGGCCGGACCATACCATCAACCTGGCGTTGGCAATCCACGGTCAGGTTGATCCTGTGACCGGCGTGTCGCAAACCATGCCGCAAGCGCCGTGGACAACGCCGGTGGAGGTGa                                                                                                >  3:52861/1‑148 (MQ=255)
                                                      gAAATCGAAAAATGCTGGCATCGCCACCGTAAATTGTGGCCGGACCATACCATCAACCTGGCGTTGGCAATCCACGGTCAGGTTGATCCTGTGACCGGCGTGTCGCAAACCATGCCGCAAGCGCCGTGGACAACGCCGGTGGAGGTGa                                                                                                >  7:507047/1‑148 (MQ=255)
                                                       aaaTCGAAAAATGCTGGCATCGCCACCGTAAATTGTGGCCGGACCATACCATCAACCTGGCGTTGGCAATCCACGGTCAGGTTGATCCTGTGACCGGCGTGTCGCAAACCATGCCGCAAGCGCCGTGGACAACGCCGGTGGAGGTGaaa                                                                                              >  8:322454/1‑149 (MQ=255)
                                                             aaaaaTGCTGGCATCGCCACCGTAAATTGTGGCCGGACCATACCATCAACCTGGCGTTGGCAATCCACGGTCAGGTTGATCCTGTGACCGGCGTGTCGCAAACCATGCCGCAAGCGCCGTGGACAACGCCGGTGGAGGTGAAATATctg                                                                                        <  5:317371/149‑1 (MQ=255)
                                                              aaaaTGCTGGCATCGCCACCGTAAATTGTGGCCGGACCATACCATCAACCTGGCGTTGGCAATCCACGGTCAGGTTGATCCTGTGACCGGCGTGTCGCAAACCATGCCGCaa                                                                                                                            >  8:352073/1‑112 (MQ=255)
                                                                 aTGCTGGCATCGCCACCGTAAATTGTGGCCGGACCATACCATCAACCTGCCGTTGGCAATCCACGCTCAGGTTGATCCTGTGACCGGCGTGTCGCAAACCATGCCGCAAGCGCCGTGGACAACTCCGGTGGAGGTGAAATATCTGCTgg                                                                                    <  6:257699/149‑1 (MQ=255)
                                                                     tGGCATCGCCACCGTAAATTGTGGCCGGACCATACCATCAACCTGGCGTTGGCAATCCACGGTCAGGTTGATCCTGTGACCGGCGTGTCGCaaa                                                                                                                                       >  6:107956/1‑94 (MQ=255)
                                                                        cATCGCCACCGTAAATTGTGGCCGGACCATACCATCAACCTGGCGTTGGCAATCCACGGTCAGGTTGATCCTGTGACCGGCGTGTCGCAAACCATGCCGCAAGCGCCGTGGACAACGCCGGTGGAGGTGAAATATCTGCTGGAAGAGaa                                                                             <  3:28560/149‑1 (MQ=255)
                                                                          tCGCCACCGTAAATTGTGGCCGGACCATACCATCAACCTGGCGTTGGCAATCCACGGTCAGGTTGATCCTGTGACCGGCGTGTCGCAAACCATGCCGCAAGCGCCGTGGACAACGCCGGTGGAGGTGAAATATCTGCTGGAAGAGAAg                                                                            >  8:363524/1‑148 (MQ=255)
                                                                            gCCACCGTAAATTGTGGCCGGACCATACCATCAACCTGGCGTTGGCAATCCACGGTCAGGTTGATCCTGTGACCGGCGTGTCGCAAACCATGCCGCAAGCGCCGTGGACAACGCCGGTGGAGGTGAAATATCTGCTGGAAGAGAAGCTc                                                                         <  8:53705/149‑1 (MQ=255)
                                                                            gCCACCGTAAATTGTGGCCGGACCATACCATCAACCTGGCGTTGGCAATCCACGGTCAGGTTGATCCTGTGACCGGCGTGTCGCAAACCATGCCGCAAGCGCCGTGGACAACGCCGGTGGAGGTGAAATATCTGCTGGAAGAGAAGCTc                                                                         >  1:488100/1‑149 (MQ=255)
                                                                            gCCACCGTAAATTGTGGCCGGACCATACCATCAACCTGGCGTTGGCAATCCACGGTCAGGTTGATCCTGTGACCGGCGTGTCGCAAACCATGCCGCAAGCGCCGTGGACAACGCCGGTGGAGGTGAAATATCTGCTGGAAGAGAAGCTc                                                                         >  3:15936/1‑149 (MQ=255)
                                                                             ccACCGTAAATTGTGGCCGGACCATACCATCAACCTGGCGTTGGCAATCCACGGTCAGGTTGATCCTGTGACCGGCGTGTCGCAAACCATGCCGCAAGCGCCGTGGACAACGCCGGTGGAGGTGAAATATCTGCTGGAAGAGAAGCTCg                                                                        <  7:304510/149‑1 (MQ=255)
                                                                               aCCGTAAATTGTGGCCGGACCATACCATCAACCTGGCGTTGGCAATCCACGGTCAGGTTGATCCTGTGACCGGCGTGTCGCAAACCATGCCGCAAGCGCCGTGGACAACGCCGGTGGAGGTGAAATATCTGCTGGAAGAGAAGCTCgg                                                                       >  8:453920/1‑148 (MQ=255)
                                                                                catcacgcagtcattatcgaccatcacccgaatgccgagcttctcttccagcagatatttcacctccACCGGCGTGTCGCAAACCATGCCGCAAGCGCCGTGGACAACGCCg                                                                                                          >  2:78280‑M1/68‑112 (MQ=255)
                                                                                  gTAAATTGTGGCCGGACCATACCATCAACCTGGCGTTGGCAATCCACGGTCAGGTTGATCCTGTGACCGGc                                                                                                                                                 >  7:260323/1‑71 (MQ=255)
                                                                                   tAAATTGTGGCCGGACCATACCATCAACCTGGCGTTGGCAATCCACGGTCAGGTTGATCCTGTGACCGGCGTGTCGCAAACCATGCCGCAAGCGCCGTGGACAACGCCGGTGGAGGTGAAATATCTGCTGGAAGAGAAGCTCGGCATTc                                                                  >  6:4106/1‑149 (MQ=255)
                                                                                   tAAATTGTGGCCGGACCATACCATCAACCTGGCGTTGGCAATCCACGGTCAGGTTGATCCTGTGACCGGCGTGTCGCAAACCATGCCGCAAGCGCCGTGGACAACGCCGGTGGAGGTGAAATATCTGCTGGAAGAGAAGCTCGGCATTc                                                                  >  6:365617/1‑149 (MQ=255)
                                                                                     aaTTGTGGCCTGACCATACCATCAACCTTGCGTTGGCAATCCACGGTCAGGTTGATCCTGTGACCGGCGTGTCGCAAACCATGCCGCAAGCGCCGTGGACAACGCCGGTGGAGGTGAAATATCTGCTGGAAGAGAAGCTCGGCATTCgg                                                                <  2:542976/149‑1 (MQ=255)
                                                                                          tgGCCGGACCATACCATCAACCTGGCGTTGGCAATCCACGGTCAGGTTGATCCTGTGACCGGCGTGTCGCAAACCATGCCGCAAGCGCCGTGGACAACGCCGGTGGAGGTGAAATATCTGCTGGAAGAGAAGCTCGGCATTCGGGTGa                                                            <  7:363524/148‑1 (MQ=255)
                                                                                               ggACCATACCATCAACCTGGCGTTGGCAATCCACGGTCAGGTTGATCCTGTGACCGGCGTGTCGCAAACCATGCCGCAAGCGCCGTGGACAACGCCGGTGGAGGTGAAATATCTGCTGGAAGAGAAGCTCGGCATTCGGGTGATGGTCg                                                      <  3:263663/149‑1 (MQ=255)
                                                                                                gACCATACCATCAACCTGGCGTTGGCAATCCACGGTCAGGTTGATCCTGTGACCGGCGTGTCGCAAACCATGCCGCAAGCGCCGTGGACAACGCCGGTGGAGGTGAAATATCTGCTGGAAGAGAAGCTCGGCATTCGGGTGATGGTCGa                                                     <  7:322454/149‑1 (MQ=255)
                                                                                                gACCATACCATCAACCTGGCGTTGGCAATCCACGGTCAGGTTGATCCTGTGACCGGCGTGTCGCAAACCATGCCGCAAGCGCCGTGGACAACGCCGGTGGAGGTGAAATATCTGCTGGAAGAGAAGCTCGGCATTCGGGTGATGGTCGa                                                     <  3:107241/149‑1 (MQ=255)
                                                                                                  ccataccatCAACCTGGCGTTGGCAATCCACGGTCAGGTTGATCCTGTGACCGGCGTGTCGCAAACCATGCCGCAAGCGCCGTGGACAACGCCGGTGGAGGTGAAATATCTGCTGGAAGAGAAGCTCGGCATTCGGGTGATGGTCGATa                                                   <  1:218811/149‑1 (MQ=255)
                                                                                                   cataccatCAACCTGGCGTTGGCAATCCACGGTCAGGTTGATCCTGTGACCGGCGTGTCGCAAACCATGCCGCAAGCGCCGTGGACAACGCCGGTGGAGGTGAAATATCTGCTGGAAGAGAAGCTCGGCATTCGGGTGATGGTCGATaa                                                  <  1:333652/149‑1 (MQ=255)
                                                                                                    ataccatCAACCTGGCGTTGGCAATCCACGGTCAGGTTGATCCTGTGACCGGCGTGTCGCAAACCATGCCGCAAGCGCCGTGGACAACGCCGGTGGAGGTGAAATATCTGCTGGAAGATAAGCTCGGCATTCGGGTGATGGTCGATAAt                                                 <  2:488100/149‑1 (MQ=255)
                                                                                                    ataccatCAACCTGGCGTTGGCAATCCACGGTCAGGTTGATCCTGTGACCGGCGTGTCGCAAACCATGCCGCAAGCGCCGTGGACAACGCCGGTGGAGGTGAAATATCTGCTGGAAGAGAAGCTCGGCATTCGGGTGATGGTCGATAAt                                                 <  7:127548/149‑1 (MQ=255)
                                                                                                     taccatCAACCTGGCGTTGGCAATCCACGGTCAGGTTGATCCTGTGACCGGCGTGTCGCAAACCATGCCGCAAGCGCCGTGGACAACGCCGGTGGAGGTGAAATATCTGCTGGAAGAGAAGCTCGGCATTCGGGTg                                                             <  6:221019/136‑1 (MQ=255)
                                                                                                      accatCAACCTGGCGTTGGCAATCCACGGTCAGGTTGATCCTGTGACCGGCGTGTCGCAAACCATGCCGCAAGCGCCGTGGACAACGCCGGTGGAGGTGAAATATCTGCTGGAAGAGAAGCTCGGCATTCGGGTGATGGTCGATAATGa                                               >  4:478619/1‑149 (MQ=255)
                                                                                                       ccatCAACCTGGCGTTGGCAATCCACGGTCAGGTTGATCCTGTGACCGGCGTGTCGCAAACCATGCCGCAAGCGCCGTGGACAACGCCGGTGGAGGTGAAATATCTGCTGGAAGAGAAGCTCGGCATTCGGGTGATGGTCGATAATGa                                               <  8:507047/148‑1 (MQ=255)
                                                                                                        catCAACCTGGCGTTGGCAATCCCCGGTCAGGTTGATCCTGTGACCGGCGTGTCGCAAACCATGCCGCAAGCGCCGTGGACAACGCCGGTGGAGGTGAAATATCTGCTGGAAGAGAAGCTCGGCATTCGGGTGATGGTCGATAATGACt                                             >  7:4798/1‑149 (MQ=255)
                                                                                                        catCAACCTGGCGTTGGCAATCCACGGTCAGGTTGATCCTGTGACCGGCGTGTCGCAAACCATGCCGCAAGCGCCGTGGACAACGCCGGTGGAGGTGAAATATCTGCTGGAAGAGAAGCTCGGCATTCGGGTGATGGTCGATAATGACt                                             >  8:446256/1‑149 (MQ=255)
                                                                                                        catCAACCTGGCGTTGGCAATCCACGGTCAGGTTGATCCTGTGACCGGCGTGACGCAAACCATGCCGCAAGCGCCGTGGACAACGCCGGTGGAGGTGAAATATCTGCTGGAAGAGAAGCTCGGCATTCGGGTGATGGTCGATAATGACt                                             >  5:57695/1‑149 (MQ=255)
                                                                                                         atCAACCTGGCGTTGGCAATCCACGGTCAGGTTGATCCTGTGACCGGCGTGTCGCAAACCATGCCGCAAGCGCCGTGGACAACGCCGGTGGAGGTGAAATATCTGCTGGAAGAGAAGCTCGGCATTCGGGTGATGGTCGATAATGACTg                                            >  5:403574/1‑149 (MQ=255)
                                                                                                          tCAACCTGGCGTTGGCAATCCACGGTCAGGTTGATCCTGTGACCGGCGTGTCGCAAACCATGCCGCAAGCGCCGTGGACAACGCCGGTGGAGGTGAAATATCTGCTGGAAGAGAAGCTCGGc                                                                      >  1:18381/1‑122 (MQ=255)
                                                                                                          tCAACCTGGCGTTGGCAATCCACGGTCAGGTTGATCCTGTGACCGGCGTGTCGCAAACCATGCCGCAAGCGCCGTGGACAACGCCGGTGGAGGTGAAATATCTGCTGGAAGAGAAGCTCGGc                                                                      <  2:18381/122‑1 (MQ=255)
                                                                                                          tCAACCTGGCGTTGGCAATCCACGGTCAGGTTGATCCTGTGACCGGCGTGTCGCAAACCATGCCGCAAGCGCCGTGGACAACGCCGGTGGAGGTGAAATATCTGCTGGAAGAGAAGCTCGGCATTCGGGTGATGGTCGATAATGACTGc                                           >  2:16214/1‑149 (MQ=255)
                                                                                                          tCAACCTGGCGTTGGCAATCCACGGTCAGGTTGATCCTGTGACCGGCGTGTCGCAAACCATGCCGCAAGCGCCGTGGACAACGCCGGTGGAGGTGAAATATCTGCTGGAAGAGAAGCTCGGCATTCGGGTGATGGTCGATAATGACTGc                                           >  5:256390/1‑149 (MQ=255)
                                                                                                           cAACCTGGCGTTGGCAATCCACGGTCAGGTTGATCCTGTGACCGGCGTGTCGCAAACCATGCCGCAAGCGCCGTGGACAACGCCGGTGGAGGTGAAATATCTGCTGGAAGAGAAGCTCGGCATTCGGGTGATGGt                                                        <  3:441118/135‑1 (MQ=255)
                                                                                                           cAACCTGGCGTTGGCAATCCACGGTCAGGTTGATCCTGTGACCGGCGTGTCGCAAACCATGCCGCAAGCGCCGTGGACAACGCCGGTGGAGGTGAAATATCTGCTGGAAGAGAAGCTCGGCATTCGGGTGATGGt                                                        >  4:441118/1‑135 (MQ=255)
                                                                                                             aCCTGGCGTTGGCAATCCACGGTCAGGTTGATCCTGTGACCGGCGTGTCGCAAACCATGCCGCAAGCGCCGTGGACAACGCCGGTgg                                                                                                      >  1:256002/1‑87 (MQ=255)
                                                                                                             aCCTGGCGTTGGCAATCCACGGTCAGGTTGATCCTGTGACCGGCGTGTCGCAAACCATGCCGCAAGCGCCGTGGACAACGCCGGTgg                                                                                                      <  2:256002/87‑1 (MQ=255)
                                                                                                              ccTGGCGTTGGCAATCCACGGTCAGGTTGATCCTGTGACCGGCGTGTCGCAAACCATGCCGCAAGCGCCGTTGACAACGCCTGTGGAGGTGAAATATCTGCTGGAAGAGAAGCTCGGCATTCGGGTGATGGTCGATAATGACTGCGTGa                                       <  1:16214/149‑1 (MQ=255)
                                                                                                               cTGGCGTTGGCAATCCACGGTCAGGTTGATCCTGTGACCGGCGTGTCGCAAACCATGCCGCAAGCGCCGTGGACAACGCCGGTGGAGGTGAAATATCTGCTGGAAGAGAAGCTCGGCATTCggg                                                               <  5:448480/124‑1 (MQ=255)
                                                                                                               cTGGCGTTGGCAATCCACGGTCAGGTTGATCCTGTGACCGGCGTGTCGCAAACCATGCCGCAAGCGCCGTGGACAACGCCGGTGGAGGTGAAATATCTGCTGGAAGAGAAGCTCGGCATTCggg                                                               >  6:448480/1‑124 (MQ=255)
                                                                                                                tGGCGTTGGCAATCCACGGTCAGGTTGATCCTGTGACCGGCGTGTCGCAAACCATGCCGCAAGCGCCGTGGACAACGCCGGTGGAGGTGAAATATCTGCTGGAAGAGAAGCTCGGCATTCGGGTGATGGTCGATAATGACTGCGTGATg                                     >  6:483065/1‑149 (MQ=255)
                                                                                                                 ggCGTTGGCAATCCACGGTCAGGTTGATCCTGTGACCGGCGTGTCGCAAACCATGCCGCAAGCGCCGTGGACAACGCCGGTGGAGGTGAAATATCTGCTGGAAGAGAAGCTCGGCATTCGGGTGATGGTCGATa                                                   >  5:145142/1‑134 (MQ=255)
                                                                                                                     ttGGCAATCCACGGTCAGGTTGATCCTGTGACCGGCGTGTCGCAAACCATGCCGCAAGCGCCGTGGACAACGCCGGTGGAGGTGAAATATCTGCTGGAAgaga                                                                              >  4:356203/1‑103 (MQ=255)
                                                                                                                     ttGGCAATCCACGGTCAGGTTGATCCTGTGACCGGCGTGTCGCAAACCATGCCGCAAGCGCCGTGGACAACGCCGGTGGAGGTGAAATATCTGCTGGAAgaga                                                                              <  3:356203/103‑1 (MQ=255)
                                                                                                                     ttGGCAATCCACGGTCAGGTTGATCCTGTGACCGGCGTGTCGCAAACCATGCCGCAAGCGCCGTGGACAACGCCGGTGGAGGTGAAATATCTGCTGGAAGAGAAGCTCGGCATTCGGGTGATGGTCGATAATGACTGCGTGa                                       <  2:374943/142‑1 (MQ=255)
                                                                                                                       ggCAATCCACGGTCAGGTTGATCCTGTGACCGGCGTGTCGCAAACCATGCCGCAAGCGCCGTGGACAACGCCGGTGGAGGTGAAATATCTGCTGGAAGAGAAGCTCGGCATTCGGGTGATGGTCGATAATGACTGCGTGATgctggcgc                              >  7:206055/1‑149 (MQ=255)
                                                                                                                        gCAATCCACGGTCAGGTTGATCCTGTGACCGGCGTGTCGCAAACCATGCCGCAAGCGCCGTGGACAACGCCGGTGGAGGTGAAATATCTGCTGGAAGAGAAGCTCGGCATTCGGGt                                                              >  1:67718/1‑116 (MQ=255)
                                                                                                                           aTCCACGGTCAGGTTGATCCTGTGACCGGCGTGTCGCAAACCATGCCGCAAGCGCCGTGGATAACGCCGGTGGAGGTGAAATATCTGCTGGAAGAGAAGCTCGGCATTCGGGTGATGGTCGATAATGACTGc                                           >  7:429400/1‑132 (MQ=255)
                                                                                                                             ccACGGTCAGGTTGATCCTGTGACCGGCGTGTCGCAAACCATGCCGCAAGCGCCGTGGACAACGCCGGTGGAGGTGAAATATCTGCTGGAAGAGAAGCTCGGCATTCGGGTGATGGTCGATAATGACTGCGTGATGctggcgctggcg                         >  6:252088/1‑148 (MQ=255)
                                                                                                                              cACGGTCAGGTTGATCCTGTGACCGGCGTGTCGCAAACCATGCCGCAAGCGCCGTGGACAACGCCGGTGGAGGTGAAATATCTGCTGGAAGAGAAGCTCGGCATTCGGGTGATGGTCGATAATGACTGCGTGATGCTGGCGCTGGCGga                       <  8:25441/149‑1 (MQ=255)
                                                                                                                                   tCAGGTTGATCCTGTGACCGGCGTGTCGCAAACCATGCCGCAAGCGCCGTGGACAACGCCGGTGGAGGTGAAATATCTGCTGGAAGAGAAGCTCGGCATTCGGGTGATGGTCGATAATGACTGCGTGATGCTGGCGCTGGCGGAGAAAt                  <  7:453920/149‑1 (MQ=255)
                                                                                                                                   tCAGGTTGATCCTGTGACCGGCGTGTCGCAAACCATGCCGCAAGCGCCGTGGACAACGCCGGTGGAGGTGAAATATCTGCTGGAAGAGAAGCTCGGCATTCGGGTGATGGTCGATAATGACTGCGTGATGCTGGCGCTGGCGGAGAAAt                  >  3:488364/1‑149 (MQ=255)
                                                                                                                                   tCAGGTTGATCCTGTGACCGGCGTGTCGCAAACCATGCCGCAAGCGCCGTGGACAACGCCGGTGGAGGTGAAATATCTGCTGGAAGAGAAGCTCGGCATTCGGGTGATGGTCGATAATGACTGCGTGATGCTGGCGCTGGCGGAGAAAt                  >  5:210054/1‑149 (MQ=255)
                                                                                                                                       gTTGATCCTGTGACCGGCGTGTCGCAAACCATGCCGCAAGCGCCGTGGACAACGCCGGTGGAGGTGAAATATCTGCTGGAAGAGAAGCTCGGCATTCGGGt                                                              <  6:352855/101‑1 (MQ=255)
                                                                                                                                       gTTGATCCTGTGACCGGCGTGTCGCAAACCATGCCGCAAGCGCCGTGGACAACGCCGGTGGAGGTGAAATATCTGCTGGAAGAGAAGCTCGGCATTCGGGt                                                              >  5:352855/1‑101 (MQ=255)
                                                                                                                                       gTTGATCCTGTGACCGGCGTGTCGCAAACCATGCCGCAAGCGCCGTGGACAACGCCGGTGGAGGTGAAATATCTGCTGGAAGAGAAGCTCGGCATTCGGGTGATGGTCGATAATGACTGCGTGa                                       <  7:155810/124‑1 (MQ=255)
                                                                                                                                       gTTGATCCTGTGACCGGCGTGTCGCAAACCATGCCGCAAGCGCCGTGGACAACGCCGGTGGAGGTGAAATATCTGCTGGAAGAGAAGCTCGGCATTCGGGTGATGGTCGATAATGACTGCGTGATGCTGGCGCTGGCGGAGAAAt                  >  1:505905/1‑145 (MQ=255)
                                                                                                                                       gTTGATCCTGTGACCGGCGTGTCGCAAACCATGCCGCAAGCGCCGTGGACAACGCCGGTGGAGGTGAAATATCTGCTGGAAGAGAAGCTCGGCATTCGGGTGATGGTCGATAATGACTGCGTGATGCTGGCGCTGGCGGAGAAAt                  <  2:505905/145‑1 (MQ=255)
                                                                                                                                       gTTGATCCTGTGACCGGCGTGTCGCAAACCATGCCGCAAGCGCCGTGGACAACGCAGGTGGAGGTGAAATATCTGCTGGAAGAGAAGCTCGGCATTCGGGTGATGGTCGATAATGAGGGCGTGATGCTGGCGCTGGCGGAGTAATGGc               >  1:77998/1‑148 (MQ=255)
                                                                                                                                          gATCCTGTGACCGGCGTGTCGCAAACCATGCCGCAAGCGCCGTGGACAACGCCGGTGGAGGTGAAATATCTGCTGGAAGAGAAGCTCGGCATTCGGGTGATGGTCGATAATGACTGCGTGATgctg                                  >  2:526788/1‑126 (MQ=255)
                                                                                                                                          gATCCTGTGACCGGCGTGTCGCAAACCATGCCGCAAGCGCCGTGGACAACGCCGGTGGAGGTGAAATATCTGCTGGAAGAGAAGCTCGGCATTCGGGTGATGGTCGATAATGACTGCGTGATgctg                                  <  1:526788/126‑1 (MQ=255)
                                                                                                                                          gATCCTGTGACCGGCGTGTCGCAAACCATGCCGCAAGCGCCGTGGACAACGCCGGTGGAGGTGAAATATCTGCTGGAAGAGAAGCTCGGCATTCGGGTGATGGTCGATAATGACTGCGTGATGCTGGCGCTGGCGGAGaaa                   <  5:366731/141‑1 (MQ=255)
                                                                                                                                            tCCTGTGACCGGCGTGTCGCAAACCATGCCGCAAGCGCCGTGGACAACGCCGGTGGAGGTGAAATATctg                                                                                        <  8:270955/70‑1 (MQ=255)
                                                                                                                                            tCCTGTGACCGGCGTGTCGCAAACCATGCCGCAAGCGCCGTGGACAACGCCGGTGGAGGTGAAATATctg                                                                                        >  7:270955/1‑70 (MQ=255)
                                                                                                                                              cTGTGACCGGCGTGTCGCAAACCATGCCGCAAGCGCCGTGGACAACGCCGGTGGAGGTGAAATATCTGCTGGAAGAGAAGCTCGGCATTCGGGTGATGGTCGATAATGACTGCGTGATGCTGGCGCTGGCGGAGAAATGGCAAaataat       >  7:224928/1‑149 (MQ=255)
                                                                                                                                                gtgACCGGCGTGTCGCAAACCATGCCGCAAGCGCCGTGGACAACGCCGGTGGAGGTGAAATATCTGCTGGAAGAGAAGCt                                                                          >  7:549426/1‑80 (MQ=255)
                                                                                                                                                gtgACCGGCGTGTCGCAAACCATGCCGCAAGCGCCGTGGACAACGCCGGTGGAGGTGAAATATCTGCTGGAAGAGAAGCt                                                                          <  8:549426/80‑1 (MQ=255)
                                                                                                                                                 tgACCGGCGTGTCGCAAACCATGCCGCAAGCGCCGTGGACAACGCCGGTGGAGGTGAAATATCTGCTGGAAGAGAAGCTCGGCATTCgg                                                                <  2:263602/89‑1 (MQ=255)
                                                                                                                                                 tgACCGGCGTGTCGCAAACCATGCCGCAAGCGCCGTGGACAACGCCGGTGGAGGTGAAATATCTGCTGGAAGAGAAGCTCGGCATTCGGGTGATGGTCGATAATGACTGCGTGATGCTGGCGCTGGCGGAGAAATGGCAAAATAATTc     <  6:403574/148‑1 (MQ=255)
                                                                                                                                                 tgACCGGCGTGTCGCAAACCATGCCGCAAGCGCCGTGGACAACGCCGGTGGAGGTGAAATATCTGCTGGAAGAGAAGCTCGGCATTCGGGTGATGGTCGATAATGACTGCGTGATGCTGGCGCTGGCGGAGAAATGGCAAAATAATTCg    <  1:359553/149‑1 (MQ=255)
                                                                                                                                                   |                                                                                                                                                    
GGTGAATTTGAGTATTTACAGATTGATGCACCGACGCCGCAGGCGCTGCTGTCCGAAATCGAAAAATGCTGGCATCGCCACCGTAAATTGTGGCCGGACCATACCATCAACCTGGCGTTGGCAATCCACGGTCAGGTTGATCCTGTGACCGGCGTGTCGCAAACCATGCCGCAAGCGCCGTGGACAACGCCGGTGGAGGTGAAATATCTGCTGGAAGAGAAGCTCGGCATTCGGGTGATGGTCGATAATGACTGCGTGATGCTGGCGCTGGCGGAGAAATGGCAAAATAATTCGCA  >  NC_000913/2683178‑2683473

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.