| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 4,270,523 | C→A | 100% | L96M (CTG→ATG) | yjbQ → | thiamine phosphate synthase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 4,270,523 | 0 | C | A | 98.2% | 384.5 / ‑2.2 | 111 | L96M (CTG→ATG) | yjbQ | thiamine phosphate synthase |
| Reads supporting (aligned to +/- strand): ref base C (0/0); major base A (61/48); minor base T (1/1); total (62/49) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 7.72e-01 | |||||||||||
| Rejected as polymorphism: E-value score below prediction cutoff. | |||||||||||
| Rejected as polymorphism: Frequency below/above cutoff threshold. | |||||||||||
| Rejected as polymorphism: Variant not supported by required number of reads on each strand. | |||||||||||
Only 100 of 115 total aligned reads displayed.
CCTCTCTGACACTTAATGAGAACTGCGATCCCACCGTACGCCACGACATGGAGCGTTTTTTCCTCCGCACCGTTCCCGACAACGGAAATTATGAGCATGACTATGAGGGAGCAGACGATATGCCTTCTCATATCAAATCCTCAATGCTGGGAACATCGCTTGTATTGCCGGTGCATAAAGGGCGTATTCAGACCGGCACCTGGCAAGGCATTTGGCTGGGGGAACATCGCATCCACGGCGGATCGCGTCGCATCATCGCGACACTACAAGGGGAGTAAAAAATGACCATTTC > NC_000913/4270377‑4270668 | ccTCTCTGACACTTAATGAGAACTGCGATCCCACCGTACGCCACGACATGGAGCGTTTTTTCCTCCGCACCGTTCCCGACAACGGAAATTATGAGCATGACTATGAGGGAGCAGACGATATGCCTTCTCATATCAAATCCTCAatgatg < 3:379150/149‑1 (MQ=255)ccTCTCTGACACTTAATGAGAACGGCGATCCCACCGTACGCCACGACATGGAGCGTTTTTTCCTCCGCACCGTTCCCGACAACGGAAATTATGAGCATGACTATGAGGGAGCAGACGATATGCCTTCTCATATCAAATCCTCAatgatg < 3:268089/149‑1 (MQ=255)ccTCTCTAACACTTAATGAGAACTGCGATCCCACCGTACGCCACGACATGGAGCGTTTTTTCCTCCGCACCGTTCCCGACAACGGAAATTATGAGCATGACTATGAGGGAGCAGACGATATGCCTTCTCATATCAAATCCTCAatgatg > 5:160362/1‑149 (MQ=255) ctctctAACACTTAATGAGAACTGCGATCCCACCGTACGCCACGACATGGAGCGTTTTTTCCTCCGCACCGTTCCCGACAACGGAAATTATGAGCATGACTATGAGGGAGCAGACGATATGCCTTCTCATATCAAATCCTCAATGATgg < 6:160362/149‑1 (MQ=255) tctctGACACTTAATGAGAACTGCGATCCCACCGTACGCCACGACATGGAGCGTTTTTTCCTCCGCACCGTTCCCGACAACGGAAATTATGAGCATGACTATGAGGGAGCAGACGATATGCCTTCTCATATCAAATCCTCAATGATgg > 5:173775/1‑148 (MQ=255) tctGACACTTAATGAGAACTGCGATCCCACCGTACGCCACGACATGGAGCGTTTTTTCCTCCGCACCGTTCCCGACAACGGAAATTATGAGCATGACTATGAGGGAGCAGACGATATGCCTTCTCATATCAAATCCTCAATGATggg < 7:212694/147‑1 (MQ=255) tctGACACTTAATGAGAACTGCGATCCCACCGTACGCCACGACATGGAGCGTTTTTTCCTCCGCACCGTTCCCGACAACGGAAATTATGAGCATGACTATGAGGGAGCAGACGATATGCCTTCTCATATCAAATCCTCAATGATGGGaa > 6:42789/1‑149 (MQ=255) tGACACTTAATGAGAACTGCGATCCCACCGTACGCCACGACATGGAGCGTTTTTTCCTCCGCACCGTTCCCGACAACGGAAATTATGAGCATGACTATGAGGGAGCAGACGATATGCCTTCTCATATCAAATCCTCAATGATGGGAACa > 1:127767/1‑149 (MQ=255) tGACACTTAATGAGAACTGCGATCCCACCGTACGCCACGACATGGAGCGTTTTTTCCTCCGCACCGTTCCCGACAACGGAAATTATGAGCATGACTATGAGGGAGCAGACGATATGCCTTCTCATATCAAATCCTCAATGATGGGAACa > 3:314926/1‑149 (MQ=255) acacTTAATGAGAACTGCGATCCCACCGTACGCCACGACATGGAGCGTTTTTTCCTCCGCACCGTTCCCGACAACGGAAATTATGAGCATGACTATGAGGGAGCAGACGATATGCCTTCTCATATCAAATCCTCAATGATGGGAACa < 8:46661/147‑1 (MQ=255) acTTAATGAGAACTGCGATCCCACCGTACGCCACGACATGGAGCGTTTTTTCCTCCGCACCGTTCCCGACAACGGAAATTATGAGCATGACTATGAGGGAGCAGACGATATGCCTTCTCATATCAAATCCTCAATGATGGGAACATCGc > 1:24201/1‑149 (MQ=255) ttAATGAGAACTGCGATCCCACCGTACGCCACGACATGGAGCGTTTTTTCCTCCGCACCGTTCCCGACAACGGAAATTATGAGCATGACTATGAGGGAGCAGACGATATGCCTTCTCATATCAAATCCTCAATGATGGGAACATCGCtt > 2:263729/1‑149 (MQ=255) aaTGAGAACTGCGATCCCACCGTACGCCACGACATGGAGCGTTTTTTCCTCCGCACCGTTCCCGACAACGGAAATTATGAGCATGACTATGAGGGAGCAGACGATATGCCTTCTCATATCAAATCCTCAATGATGGGAACATCGCtt < 2:127767/147‑1 (MQ=255) aCTGCGATCCCACCGTACGCCACGACATGGAGCGTTTTTTCCTCCGCACCGTTCCCGACAACGGAAATTATGAGCATGACTATGAGGGAGCAGACGATATGCCTTCTCATATCAAATCCTCAATGATGGGAACATCGCTTGTATTGCCg < 2:24201/149‑1 (MQ=255) tGCGATCCCACCGTACGCCACGACATGGAGCGTTTTTTCCTCCGCACCGTTCCCGACAACGGAAATTATGAGCATGACTATGAGGGAGCAGACGATATGCCTTCTCATATCAAATCCTCAATGATGGGAACATCGCTTGTATTGCCGGt > 8:361945/1‑149 (MQ=255) cGATCCCACCGTACGCCACGACATGGAGCGTTTTTTCCTCCGCACCGTTCCCGACAACGGAAATTATGAGCATGACTATGAGGGAGCAGACGATTTGCCTTCTCATATCAAATCCTCAATGATGGGAACATCGCTTGTATTGCCGGt < 2:360843/147‑1 (MQ=255) cGATCCCACCGTACGCCACGACATGGAGCGTTTTTTCCTCCGCACCGTTCCCGACAACGGAAATTATGAGCATGACTATGAGGGAGCAGACGATATGCCTTCTCATATCAAATCCTCAATGATGGGAACATCGCTTGTATTGCCGGTGc < 7:78175/149‑1 (MQ=255) aTCCCACCGTACGCCACGACATGGAGCGTTTTTTCCTCCGCACCGTTCCCGACAACGGAAATTATGAGCATGACTATGAGGGAGCAGACGATATGCCTTCTCATATCAAATCCTCAATGATGGGAACATCGCTTGTATTGCCGGTGCa > 5:125991/1‑148 (MQ=255) aCCGTACGCCACGACATGGAGCGTTTTTTCCTCCGCACCGTTCCCGACAACGGAAATTATGAGCATGACTATGAGGGAGCAGACGATATGCCTTCTCATATCAAATCCTCAATGATGGGAACATCGCTTGTATTGCCGGTGCATAAAgg < 7:235711/149‑1 (MQ=255) cGTACGCCACGACATGGAGCGTTTTTTCCTCCGCACCGTTCCCGACAACGGAAATTATGAGCATGACTATGAGGGAGCAGACGATATGCCTTCTCATATCAAATCCTCAATGATGGGAACATCGCTTGTATTGCCGGTGCATAAAGGGc < 4:363883/149‑1 (MQ=255) gCCACGACATGGAGCGTTTTTTCCTCCGCACCGTTCCCGACAACGGAAATTATGAGCATGACTATGAGGGAGCAGACGATATGCCTTCTCATATCAAATCCTCAATGATGGGAACATCGCTTGTATTGCCGGTGCATAAAGGGCGTAt > 8:228018/1‑148 (MQ=255) gCCACGACATGGAGCGTTTTTTCCTCCGCACCGTTCCCGACAACGGAAATTATGAGCATGACTATGAGGGAGCAGACGATATGCCTTCTCATATCAAATCCTCAATGATGGGAACATCGCTTGTATTGCCGGTGCATAAAGGGAGCAtt > 6:106815/1‑149 (MQ=255) cACGACATGGAGCGTTTTTTCCTCCGCACCGTTCCCGACAACGGAAATTATGAGCATGACTATGAGGGAGCAGACGATATGCCTTCTCATATCAAATCCTCAATGATGGGAACATCGCTTGTATTGCCGGTGCATAAAGGGCGTAtt > 4:67686/1‑147 (MQ=255) cACGACATGGAGCGTTTTTTCCTCCGCACCGTTCCCGACAACGGAAATTATGAGCATGACTATGAGGGAGCAGACGATATGCCTTCTCATATCAAATCCTCAATGATGGGAACATCGCTTGTATTGCCGGTGCATAAAGGGCGTATTCa < 3:67686/149‑1 (MQ=255) gACATGGAGCGTTTTTTCCTCCGCACCGTTCCCGACAACGGAAATTATGAGCATGACTTTGAGGGAGCAGACGATATGCCTTCTCATATCAAATCCTCAATGATGGGAACATCGCTTGTATTGCCGGTGCATaaa > 7:300540/1‑135 (MQ=255) gACATGGAGCGTTTTTTCCTCCGCACCGTTCCCGACAACGGAAATTATGAGCATGACTATGAGGGAGCAGACGATATGCCTTCTCATATCAAATCCTCAATGATGGGAACATCGCTTGTATTGCCGGTGCATaaa < 8:300540/135‑1 (MQ=255) gACATGGAGCGTTTTTTCCTCCGCACCGTTCCCGACAACGGAAATTATGAGCATGACTATGAGGGAGCAGACGATATGCCTTCTCATATCAAATCCTCAATGATGGGAACATCGCTTGTATTGCCGGTGCATAAAGGGCGTATTCAGAc < 1:263729/149‑1 (MQ=255) aTGGAGCGTTTTTTCCTCCGCACCGTTCCAGACAACGGAAATTATGAGCATGACTATGAGGGAGCAGACGATATGCCTTCTCATATCAAATCCTCAATGATGGGAACATCGCTTGTATTGCCGGTGCATAAAGGGCGTATTCAGAACgg > 1:198324/1‑149 (MQ=255) gAGCGTTTTTTCCTCCGCACCGTTCCCGACAACGGAAATTATGACCATGACTATGAGGTAGCAGACGATATGCCTTCTCATATCAAAACCACAATGATGGTAACCTCGCATGAATTGCACGTCAATAAAGGTCTTATTCAGACCGCCa > 4:224289/1‑148 (MQ=255) aGCGTTTTTTCCTCCGCACCGTTCCCGACAACGGAAATTATGAGCATGACTATGAGGGAGCAGACGATATGCCTTCTCATATCAAATCCTCAATGATGGGAACATCGCTTGTATTGCCGGTGCATAAAGGGCGTATTCAGACCGGCAcc > 8:366002/1‑149 (MQ=255) gCGTTTTTTCCTCCGCACCGTTCCCGACAACGGAAATTATGAGCATGACTATGAGGGAGCAGACGATATGCCTTCTCATATCAAATCCTCAATGATGGGAACATCGCTTGTATTGCCGGTGCATAAAGGGCGTATTCAGACCGGCACCt < 4:196001/149‑1 (MQ=255) cGTTTTTTCCTCCGCACCGTTCCCGACAACGGAAATTATGAGCATGACTATGAGGGAGCAGACGATATGCCTTCTCATATCAAATCCTCAATGTTGGGAACATCGCTTGTATTGCCGGTGCATaaa > 6:28616/1‑126 (MQ=255) cGTTTTTTCCTCCGCACCGTTCCCGACAACGGAAATTATGAGCATGACTATGAGGGAGCAGACGATATGCCTTCTCATATCAAATCCTCAATGTTGGGAACATCGCTTGTATTGCCGGTGCATaaa < 5:28616/126‑1 (MQ=255) ttttttCCTCCGCACCGTTCCCGACAACGGAAATTATGAGCATGACTATGAGGGAGCAGACGATATGCCTTCTCATATCAAATCCTCAATGATGGGAACATCGCTTGTATTGCCGGTGCATAAAGGGCGTATTCAGACCGGCACCTgg > 1:143345/1‑148 (MQ=255) tttCCTCCGCACCGTTCCCGACAACGGAAATTATGAGCATGACTATGAGGGAGCAGACGATATGCCTTCTCATATCAAATCCTCAATGATGGGAACATCGCTTGTATTGCCGGTGCATAAAGGGCGTATTCAGACCGGCACCTGGCaa < 7:366002/148‑1 (MQ=255) ctccGCACCGTTCCCGACAACGGAAATTATGAGCATGACTATGAGGGAGCAGACGATATGCCTTCTCATATCAAATCCTCAATGATGGGAACATCGCTTGTATTGCCGGTGCATAAAGGGCGTATTCAGACCGGCACCTGGCAAGGCAt > 7:129016/1‑149 (MQ=255) tccGCACCGTTCCCGACAACGGAAATTATGAGCATGACTATGAGGGAGCAGACGATATGCCTTCTCATATCAAATCCTCAATGATGGGAACATCGCTTGTATTGCCGGTGCATAAAGGGCGTATTCAGACCGGCACCTGGCAAGGCAtt > 7:418144/1‑149 (MQ=255) cACCGTTCCCGACAACGGAAATTATGAGCATGACTATGAGGGAGCAGACGATATGCCTTCTCATATCAAATCCTCAATGATGGGAACATCGCTTGTATTGCCGGTGCATAAAGGGCGTATTCAGACCGGCACCTGGCAAGGCATTTGGc < 6:173775/149‑1 (MQ=255) aCCGTTCCCGACAACGGAAATTATGAGCATGACTATGAGGGAGCAGACGATATGCCTTCTCATATCAAATCCTCAATGATGGGAACATCGCTTGTATTGc < 8:221826/100‑1 (MQ=255) aCCGTTCCCGACAACGGAAATTATGAGCATGACTATGAGGGAGCAGACGATATGCCTTCTCATATCAAATCCTCAATGATGGGAACATCGCTTGTATTGCCGGTGCATAAAGGGCGTATTCAGACCGGCACCTGGCAAGGCATTTGGCt < 7:163020/149‑1 (MQ=255) cGTTCCCGACAACGGAAATTATGAGCATGACTATGAGGGAGCAGACGATATGCCTTCTCATATCAAATCCTCAATGATGGGAACATCGCTTGTATTGCCGGTGCATAAAGGGCGTATTCAGACCGGCACCTGGCAAGGCATTTGGCTgg < 7:228018/149‑1 (MQ=255) gTTCCCGACAACGGAAATTATGAGCATGACTATGAGGGAGCAGACGATATGCCTTCTCATATCAAATCCTCAATGATGGGAACATCGCTTGTATTGCCGGTGCATAAAGGGCGTATTCAGACCGGCACCTGGCAAGGCATTTGGCTggg < 7:109704/149‑1 (MQ=255) gTTCCCGACAACGGAAATTATGAGCATGACTATGAGGGAGCAGACGATATGCCTTCTCATATCAAATCCTCAATGATGGGAACATCGCTTGTATTGCCGGTGCATAAAGGGCGTATTCAGACCGGCACCTGGCAAGGCATTTGGCTggg < 1:140443/149‑1 (MQ=255) gTTCCCGACAACGGAAATTATGAGCATGACTATGAGGGAGCAGACGATATGCCTTCTCATATCAAATCCTCAATGATGGGAACATCGCTTGTATTGCCGGTGCATAAAGGGCGTATTCAGACCGGCACCTGGCAAGGCATTTGGCTggg < 3:104026/149‑1 (MQ=255) cGACAACGGAAATTATGAGCATGACTATGAGGGAGCAGACGATATGCCTTCTCATATCAAATCCTCAATGATGGGAACATCGCTTGTATTGCCGGTGCATAAAGGGCGTATTCAGACCGGCACCTGGCAAGGCATTTGGCTGGGGGaa > 5:129990/1‑148 (MQ=255) cGACAACGGAAATTATGAGCATGACTATGAGGGAGCAGACGATATGCCTTCTCATATCAAATCCTCAATGATGGGAACATCGCTTGTATTGCCGGTGCATAAAGGGCGTATTCAGACCGGCACCTGGCAAGGCATTTGGCTGGGGGAAc < 5:42789/149‑1 (MQ=255) gACAACGGAAATTATGAGCATGACTATGAGGGAGCAGACGATATGCCTTCTCATATCAAATCCTCAATGATGGGAACATCGCTTGTATTGCCGGTGCATAAAGGGCGTATTCAGACCGGCACCTGGCAAGGCATTTGGCTGGGGGAACa < 4:141510/149‑1 (MQ=255) cGGAAATTATGAGCATGACTATGAGGGAGCAGACGATATGCCTTCTCATATCAAATCCTCAATGATGGGAACATCGCTTGTATTGCCGGTGCATAAAGGGCGTATTCAGACCGGCACCTGGCAAGGCATTTGGCTGGGGGAACATCGCa > 8:231909/1‑149 (MQ=255) cGGAAATTATGAGCATGACTATGAGGGAGCAGACGATATGCCTTCTCATATCAAATCCTCAATGATGGGAACATCGCTTGTATTGCCGGTGCATAAAGGGCGTATTCAGACCGGCACCTGGCAAGGCATTTGGCTGGGGGAACATCGCa > 2:60570/1‑149 (MQ=255) aaTTATGAGCATGACTATGAGGGAGCAGACGATATGCCTTCTCATATCAAATCCTCAATGATGGGAACATCGCTTGTATTGCCGGTGCATAAAGGGCGTATTCAGACCGGCACCTGGCAAGGCATTTGGCTGGGGGAACATCGCATCCa < 6:125991/149‑1 (MQ=255) aTTATGAGCATGACTATGAGGGAGCAGACGATATGCCTTCTCATATCAAATCCTCAATGATGGGAACATCGCTTGTATTGCCGGTGCATAAAGGGCGTATTCAGACCGGCACCTGGCAAGGCATTTGGCTGGGGGAACATCGCATCCAc > 5:221174/1‑149 (MQ=255) tGAGCATGACTATGATGGAGCAGACGATATGCCTTCTCATATCAAATCCTCAATGATGGGAAAATCGCTTGTATTGCCGGTGCATAAAGGGCGGAGTCAGACCGGCACCTGGCAAGGCATTTGGCTGGGGGAACATCGCATCCAcggc < 3:224289/148‑1 (MQ=255) tGAGCATGACTATGAGGGAGCAGACGATATGCCTTCTCATATCAAATCCTCAATGATGGGAACATCGCTTGTATTGCCGGTGCATAAAGGGCGTATTCAGACCGGCACCTGGCAAGGCATTTGGCTGGGGGAACATCGCATCCAcggcg > 4:285622/1‑149 (MQ=255) gAGCATGACTATGAGGGAGCAGACGATATGCCTTCTCATATCAAATCCTCAATGATGGGAACATCGCTTGTATTGCCGGTGCATAAAGGGCGTATTCAGACCGGCACCTGGCAAGGCATTTGGCTGGGGGAACATCGCATCCAcggcg > 3:351877/1‑148 (MQ=255) aGCATGACTATGAGGGAGCAGACGATATGCCTTCTCATATCAAATCCTCAATGATGGGAACATCGCTTGTATTGCCGGTGCATAAAGGGCGTATTCAGACCGGCACCTGGCAAGGCATTTGGCTGGGGGAACATCGCATCCACGGCGGa < 5:186224/149‑1 (MQ=255) aGCATGACTATGAGGGAGCAGACGATATGCCTTCTCATATCAAATCCTCAATGATGGGAACATCGCTTGTATTGCCGGTGCATAAAGGGCGTATTCAGACCGGCACCTGGCAAGGCATTTGGCTGGGGGAACATCGCATCCACGGCGGa < 2:143345/149‑1 (MQ=255) aGCAAGACTATGAGGGAGCAGACGATATGCCTTCTCATATCAAATCCTCAATGATGGGAACATCGCTTGTATTGCCGGTGCATAAAGGGCGTATTCAGACCGGCACCTGGCAAGGCAATTGGATAGGGGAACATCGCATCCAcggcgg > 5:348398/1‑148 (MQ=255) gCATGACTATGAGGGAGCAGACGATATGCCTTCTCATATCAAATCCTCAATGATGGGAACATCGCTTGTATTGCCGGTGCATAAAGGGCGTATTCAGACCGGCACCTGGCAAGGCATTTGGCTGGGGGAACATCGCATCCACGGCGGAt < 3:285622/149‑1 (MQ=255) aTGACTATGAGGGAGCAGACGATATGCCTTCTCATATCAAATCCTCAATGATGGGAACATCGCTTGTATTGCCGGTGCATAAAGGGCGTATTCAGACCGGCACCTGGCAAGGCATTTGGCTGGGGGAACATCGCATCCACGGCGGATcg > 7:37982/1‑149 (MQ=255) tGACTATGAGGGAGCAGACGATATGCCTTCTCATATCAAATCCTCAATGATGGGAACATCGCTTGTATTGCCGGTGCATAAAGGGCGTATTCAGCCCGGCACCTGGCAAGGCATTTGGCTGGGGGAACATCGCATCCACGGCGGATcgc > 8:59085/1‑149 (MQ=255) tGACTATGAGGGAGCAGACGATATGCCTTCTCATATCAAATCCTCAATGATGGGAACATCGCTTGTATTGCCGGTGCATAAAGGGCGTATTCAGACCGGCACCTGGCAAGGCATTTGGCTggg > 3:274594/1‑123 (MQ=255) tGACTATGAGGGAGCAGACGATATGCCTTCTCATATCAAATCCTCAATGATGGGAACATCGCTTGTATTGCCGGTGCATAAAGGGCGTATTCAGACCGGCACCTGGCAAGGCATTTGGCTggg < 4:274594/123‑1 (MQ=255) tGACTATGAGGGAGCAGACGATATGCCTTCTCATATAAAATCCTCAATGATGGGAACATCGCTTGTATTGCCGGTGCATAAAGGGCGTAATCAGACCGGCACCTGGAAATGCATTTGGCTGGGGTAACATCGCATCCACGGCGGATcgc > 6:362986/1‑149 (MQ=255) tATGAGGGAGCAGACGATATGCCTTCTCATATCAAATCCTCAATGATGGGAACATCGCTTGTATTGCCGGTGCATAAAGGGCGTATTCAGACCGGCACCTGGCAAGGCATTTGGCTGGGGGAACATCGCATCCACGGCGGATCGCGTCg > 2:80034/1‑149 (MQ=255) tATGAGGGAGCAGACGATATGCCTTCTCATATCAAATCCTCAATGATGGGAACATCGCTTGTATTGCCGGTGCATAAAGGGCGTATTCAGACCGGCACCTGGCAAGGCATTTGGCTGGGGGAACATCGCATCCACGGCGGATCGCGTCg > 3:355787/1‑149 (MQ=255) tATGAGGGAGCAGACGATATGCCTTCTCATATCAAATCCTCAATGATGGGAACATCGCTTGTATTGCCGGTGCATAAAGGGAGTATTCAGACCGGCACCTGGCAAGGCATTTGGCTGGGGGAACATCGCATCCACGGCGGATCGCGTCg > 6:113030/1‑149 (MQ=255) gAGGGAGCAGACGATATGCCTTCTCATATCAAATCCTCAATGATGGGAACATCGCTTGTATTGCCGGTGCATAAAGGGCGTATTCAGACCGGCACCTGGCAAGGCATTTGGCTGGGGGAACATCGCATCCACGGCGGATCGCGTCGcat > 3:311379/1‑149 (MQ=255) gggAGCAGACGATATGCCTTCTCATATCAAATCCTCAATGATGGGAACATCGCTTGTATTGCCGGTGCATAAAGGGCGTATTCAGACCGGCACCTGGCAAGGCATTTGGCTGGGGGAACATCGCATCCACGGCGGATCGCGTCGcatca > 1:297884/1‑149 (MQ=255) ggAGCAGACGATATGCCTTCTCATATCAAATCCTCAATGATGGGAAAATCGCTTGTATTGCCGGTGCATAAAGGGCGTTTTCAGACCGGCTCCTGGCAAGGCATTTGGCTGGGGGAACATCGCATCCACGGCGGATCGCGTCGcatcat < 5:362986/149‑1 (MQ=255) aGACGATATGCCTTCTCATATCAAATCCTCAATGATGGGAACATCGCTTGTATTGCCGGTGCATAAAGGGCGTATTCAGACCGGCACCTGGCAAGGCATTTGGCTGGGGGAACATCGCATCCACGGCGGATCGCGTCGCATCATCGCGa > 7:151324/1‑149 (MQ=255) aGACGATATGCCTTCTCATATCAAATCCTCAATGATGGGAACATCGCTTGTATTGCCGGTGCATAAAGGGCGTATTCAGACCGGCACCTGGCAAGGCATTTGGCTGGGGGAACATCGCATCCACGGCGGATCGCGTCGCATCATCGCGa > 8:251850/1‑149 (MQ=255) gACGATATGCCTTCTCATATCAAATCCTCAATGATGGGAACATCGCTTGTATTGCCGGTGCATAAAGGGCGTATTCAGACCGGCACCTGGCAAGGCATTTGTCTGGGGGAACATCGCATCAACGGCGGATCGCGTCGCATCATCGCGa > 5:320818/1‑148 (MQ=255) gACGATATGCCTTCTCATATCAAATCCTCAATGATGGGAACATCGCTTGTATTGCCGGTGCATAAAGGGCGTATTCAGACCGGCACCTGGCAAGGCATTTGGCTGGGGGAACATCGCATCCACGGCGGATCGCGTCGCATCATCGCGa > 1:239454/1‑148 (MQ=255) gATATGCCTTCTCATATCAAATCCTCAATGATGGGAACATCGCTTGTATTGCCGGTGCATAAAGGGCGTATTCAGACCGGCACCTGGCAAGGCATTTGGCTGGGGGAACATCGCATCCACGGCGGAGCGCGTCGCATCATCGCGACACt < 6:203759/149‑1 (MQ=255) tatGCCTTCTCATATCAAATCCTCAATGATGGGAACATCGCtt < 7:223539/43‑1 (MQ=255) tatGCCTTCTCATATCAAATCCTCAATGATGGGAACATCGCtt > 8:223539/1‑43 (MQ=255) tatGCCTTCTCATATCAAATCCTCAATGATGGGAACATCGCTTGTATTGCCGGTGCATAAAGGGCGTATTCAGACCGGCACCTGGCAAGGCATTTGGCTGGGGGAACATCGCATCCACGGCGGATCGCGTCGCATCATCGCGACACTAc < 6:129990/149‑1 (MQ=255) gCCTTCTCATATCAAATCCTCAATGATGGGAACATCGCTTGTATTGCCGGTGCATAAAGGGCGTATTCAGACCGGCACCTGGCAAGGCATTTGGCTGGGGGAACATCGCATCCACGGCGGATCGCGTCGCatcatc > 8:414194/1‑136 (MQ=255) gCCTTCTCATATCAAATCCTCAATGATGGGAACATCGCTTGTATTGCCGGTGCATAAAGGGCGTATTCAGACCGGCACCTGGCAAGGCATTTGGCTGGGGGAACATCGCATCCACGGCGGATCGCGTCGCatcatc < 7:414194/136‑1 (MQ=255) gCCTTCTCATATCAAATCCTCAATGATGGGAACATCGCTTGTATTGCCGGTGCATAAAGGGCGTATTCAGACCGGCACCTGGCAAGGCATTTGGCTGGGGGAACATCGCATCCACGGCGGATCGCGTCGCATCATCGCGACACTACAAg > 2:231907/1‑149 (MQ=255) ccTTCTCATATCAAATCCTCAATGATGGGAACATCGCTTGTATTGCCGGTGCATAAAGGGCGTATTCAGACCGGCACCTGGCAAGGCATTTGGCTGGGGGAACATCGCATCCACGGCGGATCGCGTCGCATCATCGCGACACTACAAgg < 7:33544/149‑1 (MQ=255) cTTCTCATATCAAATCCTCAATGATGGGAACATCGCTTGTATTGCCGGTGCATAAAGGGCGTATTCAGACCGGCACCTGGCAAGGCATTTGGCTGGGGGAACATCGCATCCACGGCGGATCGCGTCGCATCATCGCGACACTACAAggg > 8:58023/1‑149 (MQ=255) cTTCTCATATCAAATCCTCAATGATGGGAACATCGCTTGTATTGCCGGTGCATAAAGGGCGTATTCAGACCGGCACCTGGCAAGGCATTTGGCTGGGGGAACATCGCATCCACGGCGGATCGCGTCGCATCATCGCGACACTACAAggg < 2:297884/149‑1 (MQ=255) ttCTCATATCAAATCCTCAATGATGGGAACATCGCTTGTATTGCCGGTGCATAAAGGGCGTATTCAGACCGGCACCTGGCAAGGCATTTGGCTGGGGGAACATCGCATCCACGGCGGATCGCGTCGCATCATCGCGACACTACAAggg > 5:122398/1‑148 (MQ=255) ctcATATCAAATCCTCAATGATGGGAACATCGCTTGTATTGCCGGTGCATAAAGGGCGTATTCAGACCGGCACCTGGCAAGGCATTTGGCTGGGGGAACATCGCATCCACGGCGGATCGCGTCGCATCATCGCGACACTACAAgggg < 6:221174/147‑1 (MQ=255) tcATATCAAATCCTCAATGATGGGAACATCGCTTGTATTGCCGGTGCATAAAGGGCGTATTCAGACCGGCACCTGGCAAGGCATTTGGCTGGGGGAACATCGCATCCACGGCGGATCGCGTCGCATCATCGCGACACTACAAGGGGAg > 6:283007/1‑148 (MQ=255) atatCAAATCCTCAATGATGGGAACATCGCTTGTATTGCCGGTGCATAAAGGGCGTATTCAGACCGGCACCTGGCAAGGCATTTGGCTGGGGGAAGATCGCATCCACGGCGGATCGCGTCGCATCATCGCGACACTACAAGGGGAg < 3:161534/146‑1 (MQ=255) atatCAAATCCTCAATGATGGGAACATCGCTTGTATTGCCGGTGCATAAAGGGCGTATTCAGACCGGCACCTGGCAAGGCATTTGGCTGGGGGAACATCGCATCCACGGCGGATCGCGTCGCATCATCGCGACACTACAAGGGGAGTa > 4:109452/1‑148 (MQ=255) atatCAAATCCTCAATGATGGGAACATCGCTTGTATTGCCGGTGCATAAAGGGCGTATTCAGACCGGCACCTGGCAAGGCATTTGGCTGGGGGAACATCGCATCCACGGCGGATCGCGTCGCATCATCGCGACACTACAAGGGGAGTa > 6:225061/1‑148 (MQ=255) tCAAATCCTCAATGATGGGAACATCGCTTGTATTGCCGGTGCATAAAGGGCGTATTCAGACCGGCACCTGGCAAGGCATTTGGCTGGGGGAACATCGCATCCACGGCGGATCGCGt < 1:193269/116‑1 (MQ=255) cAAATCCTCAATGATGGGAACATCGCTTGTATTGCCGGTGCATAAAGGGCGTATTCAGACCGGCACCTGGCAAGGCATTTGGCTGGGGGAACATCGCATCCACGGCGGATCGCGTCGCATCATCGCGACACTACAAGGGGAGTaaaaaa > 8:114386/1‑149 (MQ=255) cAAATCCTCAATGATGGGAACATCGCTTGTATTGCCGGTGCATAAAGGGCGTATTCAGACCGGCACCTGGCAAGGCATTTGGCTGGGGGAACATCGCATCCACGGCGGATCGCGTCGCATCATCGAGACACTACAAGGGGAGTaaaaaa > 1:19047/1‑149 (MQ=255) aaaTCCTCAATGATGGGAACATCGCTTGTATTGCCGGTGCATAAAGGGCGTATTCAGACCGGCACCTGGCAAGGCATTTGGCTgg < 2:351128/85‑1 (MQ=255) aaaTCCTCAATGATGGGAACATCGCTTGTATTGCCGGTGCATAAAGGGCGTATTCAGACCGGCACCTGGCAAGGCATTTGGCTgg > 1:351128/1‑85 (MQ=255) aaaTCCTCAATGATGGGAACATCGCTTGTATTGCCGGTGCATAAAGGGCGTATTCAGACCGGCACCTGGCAAGGCATTTGGCTGGGGGAACATCGCATCCACGGCGGATCGCGTCGCATCATCGCGACACTACAAGGGGAGTaaaaaa < 8:151324/148‑1 (MQ=255) aaaTCCTCAATGATGGGAACATCGCTTGTATTGCCGGTGCATAAAGGGCGTATTCAGACCGGCACCTGGCAAGGCATTTGGCTGGGGGAACATCGCATCCACGGCGGATCGCGTCGCATCATCGCGACACTACAAGGGGAGTaaaaaa < 7:351240/148‑1 (MQ=255) tCAATGATGGGAACATCGCTTGTATTGCCGGTGCATAAAGGGCGTATTCAGACCGGCACCTGGCAAGGCATTTGGCTGGGGGAACATCGCATCCACGGCGGATCGCGTCGCATCATCGCGACACTACAAGGGGAGTAAAAAATGACCAt > 7:166010/1‑149 (MQ=255) tCAATGATGGGAACATCGCTTGTATTGCCGGTGCATAAAGGGCGTATTCAGACCGGCACCTGGCAAGGCATTTGGCTGGGGGAACATCGCATCCACGGCGGATCGCGTCGCATCATCGCGACACTACAAGGGGAGTAAAAAATGACCAt > 6:69883/1‑149 (MQ=255) tCAATGATGGGAACATCGCTTGTATTGCCGGTGCATAAAGGGCGTATTCAGACCGGCACCTGGCAAGGCATTTGGCTGGGGGAACATCGCATCCACGGCGGATCGCGTCGCATCATCGCGACACTACAAGGGGAGTAAAAAATGACCAt > 1:212976/1‑149 (MQ=255) atgatgGGAACATCGCTTGTATTGCCGGTGCATAAAGGGCGTATTCAGACCGGCACCTGGCAAGGCATTTGGCTGGGGGAACATCGCATCCACGGCGGATCGCGTCGCATCATCGCGACACTACAAGGGGAGTAAAAAATGACCATTTc > 7:79807/1‑149 (MQ=255) | CCTCTCTGACACTTAATGAGAACTGCGATCCCACCGTACGCCACGACATGGAGCGTTTTTTCCTCCGCACCGTTCCCGACAACGGAAATTATGAGCATGACTATGAGGGAGCAGACGATATGCCTTCTCATATCAAATCCTCAATGCTGGGAACATCGCTTGTATTGCCGGTGCATAAAGGGCGTATTCAGACCGGCACCTGGCAAGGCATTTGGCTGGGGGAACATCGCATCCACGGCGGATCGCGTCGCATCATCGCGACACTACAAGGGGAGTAAAAAATGACCATTTC > NC_000913/4270377‑4270668 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |