Predicted mutation
evidence seq id position mutation freq annotation gene description
RA NC_000913 1,231,594 G→C 7.3% V137L (GTG→CTG)  umuC → translesion error‑prone DNA polymerase V subunit; DNA polymerase activity

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009131,231,5940GC 7.3% 261.8 / 9.1 79V137L (GTG→CTG) umuCtranslesion error‑prone DNA polymerase V subunit; DNA polymerase activity
Reads supporting (aligned to +/- strand):  ref base G (32/40);  new base C (3/3);  total (35/44)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.26e-01

TGGAAGAGCTATCGCCCCGCGTCGAGATTTACAGTATTGATGAGGCATTCTGCGATCTGACAGGTGTGCGTAATTGTCGCGATCTGACTGATTTTGGCAGAGAAATTCGCGCAACGGTGCTACAACGTACCCATCTTACTGTTGGTGTGGG‑GATCGCCCAGACCAAAACGCTGGCTAAGCTTGCCAATCATGCGGCAAAAAAATGGCAGCGGCAGACGGGTGGGGTGGTGGATTTATCAAATCTGGAACGCCAGCGTAAATTAATGTCTGCTCTCCCCGTGGATGACGTCTGGGG  >  NC_000913/1231448‑1231742
                                                                                                                                                  |                                                                                                                                                     
tGGAAGAGCTATCGCCCCGCGTCGAGAATTCCAGTATTGATGAGGCATTCTGCGATCTGACAGGTGTGCTGAATTGTCGCGATCTGACTGATTTTGTCAGAGAAATTCGAGAAACTGTGCTAGATCGTACCCATCATACTTTTGTtgtg                                                                                                                                                     >  1:280276/1‑149 (MQ=255)
  gAAGAGCTATCGCCCCGCGTCGAGATTTACAGTATTGATGAGGCATTCTGCGATCTGACAGGTGTGCGTAATTGTCGCGATCTGACTGATTTTGGCAGAGAAATTCGCGCAACGGTGCTACAACGTACCCATCTTACTGTTGGTGTggg                                                                                                                                                   <  7:279736/149‑1 (MQ=255)
  gAAGAGCTATCGCCCCGCGTCGAGATTTACAGTATTGATGAGGCATTCTGCGATCTGACAGGTGTGCGTAATTGTCGCGATCTGACTGATTTTGGCAGAGAAATTCGCGCAACGGTGCTACAACGTACCCATCTTACTGTTGGTGTggg                                                                                                                                                   >  7:219964/1‑149 (MQ=255)
  gAAGAGCTATCGCCCCGCGTCGAGATTTACAGTATTGATGAGGCATTCTGCGATCTGACAGGTGTGCGTAATTGTCGCGATCTGACTGATTTTGGCAGAGAAATTCGCGCAACGGTGCTACAACGTACCCATCTTACTGTTGGTGTgg                                                                                                                                                    <  5:192872/148‑1 (MQ=255)
     gagCTATCGCCCCGCGTCGAGATTTACAGTATTGATGAGGCATTCTGCGATCTGACAGGTGTGCGTAATTGTCGCGATCTGACTGATTTTGGCAGAGAAATTCGCGCAACGGTGCTACAACGTACCCATCTTACTGTTGGTGTGGG‑GAt                                                                                                                                               <  1:46389/149‑1 (MQ=255)
     gagCTATCGCCCCGCGTCGAGATTTACAGTATTGATGAGGCATTCTGCGATCTGACAGGTGTGCGTAATTGTCGCGATCTGACTGATTTTGGCAGAGAAATTCGCGCAACGGTGCTACAACGTACCCATCTTACTGTTGGTGTGGG‑GAt                                                                                                                                               >  2:46389/1‑149 (MQ=255)
         tATCGCCCCGCGTCGAGATTTACAGTATTGATGAGGCATTCTGCGATCTGACAGGTGTGCGTAATTGTCGCGATCTGACTGATTTTGGCAGAGAAATTCGCGCAACGGTGCTACAACGTACCCATCTTACTGTTGGTGTGGG‑GATCGcc                                                                                                                                           >  7:214804/1‑149 (MQ=255)
          aTCGCCACGCGACGAGATTTACACTATTGATGAGCCATTCTGCGATCTGACAGGTGTGCGTAATTGTCGCGATCTGACTGATTTTGGCAGAGAAATTCGCGCAACGGTGCTACAACGTACCCATCTTACTGTTCGTGTGGG‑GATCGcc                                                                                                                                           >  2:403380/1‑148 (MQ=255)
           tCGCCCCGCGTCGAGATTTACAGTATTGATGAGGCATTCTGCGATCTGACAGGTGTGCGTAATTGTCGCGATCTGACTGATTTTGGCAGAGAAATTCGCGCAACGGTGCTACAACGTACCCATCTTACTGTTGGTGTGGG‑GATCGcc                                                                                                                                           >  3:80409/1‑147 (MQ=255)
           gcGCCCCGCGTCGAGATTTACAGTATTGATGAGGCATTCTTCGATCTGCCAGGGGGGCGTAATTGTCGCGATCTGACTGATTTTGGCAGAGAAATTCGCGCAACGGTGCTACACCGTACCCATCTTACTGTTGGTGTGGG‑GATCGCCCa                                                                                                                                         <  8:80841/148‑1 (MQ=255)
              ccccGCGTCGAGATTTACAGTATTGATGAGGCATTCTGCGATCTGACAGGTGTGCGTAATTGTCGCGATCTGACTGATTTTGGCAGAGAAATTCGCGCAACGGTGCTACAACGTACCCATCTTACTGTTGGTGTGGG‑GATCGCCCAGAc                                                                                                                                      >  5:136041/1‑149 (MQ=255)
               cccGCGTCGAGATTTACAGTATTGATGAGGCATTCTGCGATCTGACAGGTGTGCGTAATTGTCGCGATCTGACTGATTTTGGCAGAGAAATTCGCGCAACGGTGCTACAACGTACCCATCTTACTGTTGGTGTGGG‑TATCGCCCAGAc                                                                                                                                      >  6:53141/1‑148 (MQ=255)
                ccGCGTCGAGATTTACAGTATTGATGAGGCATTCTGCGATCTGACAGGTGTGCGTAATTGTCGCGATCTGACTGATTTTGGCAGAGAAATTCGCGCAACGGTGCTACAACGTACCCATCTTACTGTTGgtgt                                                                                                                                                      >  1:84784/1‑132 (MQ=255)
                ccGCGTCGAGATTTACAGTATTGATGAGGCATTCTGCGATCTGACAGGTGTGCGTAATTGTCGCGATCTGACTGATTTTGGCAGAGAAATTCGCGCAACGGTGCTACAACGTACCCATCTTACTGTTGgtgt                                                                                                                                                      <  2:84784/132‑1 (MQ=255)
                ccGCGTCGAGATTTACAGTATTGATGAGGCATTCTGCGATCTGACAGGTGTGCGTAATTGTCGCGATCTGACTGATTTTGGCAGAGAAATTCGCGCAACGGTGCTACAACGTACCCATCTTACTGTTGGTGTGGG‑GATCGCCCAGAcc                                                                                                                                     >  5:76340/1‑148 (MQ=255)
                   cgTCGAGATTTACAGTATTGATGAGGCATTCTGCGATCTGACAGGTGTGCGTAATTGTCGCGATCTGACTGATTTTGGCAGAGAAATTCGCGCAACGGTGCTACAACGTACCCATCTTACTGTTGGTCTGGGCGATC‑CCCACACCaaca                                                                                                                                 <  3:171118/149‑3 (MQ=255)
                     tCGAGATTTACAGTATTGATGAGGCATTCTGCGATCTGACAGGTGTGCGTAATTGTCGCGATCTGACTGATTTTGGCAGAGAAATTCGCGCAACGGTGCTACAACGTACCCATCTTACTGTTGGTGTGGG‑GATCGCCCAGACCAAAACg                                                                                                                               >  3:87088/1‑149 (MQ=255)
                        agaTTTACAGTATTGATGAGGCATTCTGCGATCTGACAGGTGTGCGTAATTGTCGCGATCTGACTGATTTTGGCAGAGAAATTCGCGCAACGGTGCTACAACGTACCCATCTTACTGTTGGTGTGGG‑GATCGCCCAGACCAAAACGCTg                                                                                                                            <  7:95693/149‑1 (MQ=255)
                         gaTTTACAGTATTGATGAGGCTTTCTGCGATCTGACAGGTGTGCGTTATTGTCGCGATCTGACTGATTTTGGCAGAGAAATTCGCGCAACGGTGCTACAACGTACCCATCTTACTGTTGGTGTGGG‑GATCGCCCAGACCAAAACGCTg                                                                                                                            <  6:365762/148‑1 (MQ=255)
                             tACAGTATTGATGAGGCATTCTGCGATCTGACAGGTGTGCGTAATTGTCGCGATCTGACTGATTTTGGCAGAGAAATTCGCGCAACGGTGCTACAACGTACCCATCTTACTGTTGGTCTGGGCGATC‑CCCACACCaaca                                                                                                                                 >  8:109343/1‑137 (MQ=255)
                             tACAGTATTGATGAGGCATTCTGCGATCTGACAGGTGTGCGTAATTGTCGCGATCTGACTGATTTTGGCAGAGAAATTCGCGCAACGGTGCTACAACGTACCCATCTTACTGTTGGTCTGGGCGATC‑CCCACACCaaca                                                                                                                                 <  7:109343/139‑3 (MQ=255)
                              aCAGTATTGATGCGGCATTCTGCGATCTGACAGGGGTGCGTAATTGTCGCGATCTGACTGATTTTGGCAGAGAAATTCGCGCAACGGTGCTACAACGTACCCATCTTACTGTTGGTGTGGG‑GATCGCCCAGACCAAAACGCTGGCTaa                                                                                                                       <  1:273691/148‑1 (MQ=255)
                                 gTATTGATGAGGCATTCTGCGAGCTGACAGGTGTGCGTAATTGTCGCGATCTGACTGATTTTGGCAGAGAAATTCGCGCAACGGTGCTACAACGTACCCATCTTACTGTTGGTGTGGG‑GATCGCCCAGACCAAAACGCTGGCTAAGCtt                                                                                                                   <  8:212420/149‑1 (MQ=255)
                                          aGGCATTCTGCGATCTGACAGGTGTGCGTAATTGTCGCGATCTGACTGATTTTGGCAGAGAAATTCGCGCAACGGTGCTACAACGTACCCATCTTACTGTTGGTGTGGG‑GATCGCCCAGACCAAAACGCTGGCTAAGCTTGCCAATCa                                                                                                           <  2:250418/148‑1 (MQ=255)
                                          aGGCATTCTGCGATCTGACAGGTGTGCGTAATTGTCGCGATCTGACTGATTTTGGCAGAGAAATTCGCGCAACGGTGCTACAACGTACCCATCTTACTGTTGGTGTGGG‑GATCGCCCAGACCAAAACGCTGGCTAAGCTTGCCAATCa                                                                                                           <  8:182337/148‑1 (MQ=255)
                                          aGGCATTCTGCGATCTGACAGGTGTGCGTAATTGTCGCGATCTGACTGATTTTGGCAGAGAAATTCGCGCAACGGTGCTACAACGTACCCATCTTACTGTTGGTGTGGG‑GATCGCCCAGACCAAAACGCTGGCTAAGCTTGCCAATCa                                                                                                           <  6:76340/148‑1 (MQ=255)
                                           ggCATTCTGCGATCTGACATGTGTGCGTAATTGTCGCGATCTGACTGATTTTGTCAGAGAAATTCGCGCAACGGTGCTACAACGTACCCATCTTACTGTTGGTGTGGG‑GATCGCCCAGACCAAAACGCTGGCTAAGCTTGCCAATCATg                                                                                                         <  8:1206/149‑1 (MQ=255)
                                           ggCATTCTGCGATCTGACAGGTGTGCGTAATTGTCGCGATCTGACTGATTTTGGCAGAGAAATTCGCGCAACGGTGCTACAACGTACCCATCTTACTGTTGGTCTGGGCGATC‑CCCACACCaacag                                                                                                                                >  3:55894/1‑123 (MQ=255)
                                           ggCATTCTGCGATCTGACAGGTGTGCGTAATTGTCGCGATCTGACTGATTTTGGCAGAGAAATTCGCGCAACGGTGCTACAACGTACCCATCTTACTGTTGGTCTGGGCGATC‑CCCACACCaacag                                                                                                                                <  4:55894/126‑4 (MQ=255)
                                            gCATTCTGCGATCTGACAGGTGTGCGTAATTGTCGCGATCTGACTGATTTTGGCAGAGAAATTCGCGCAACGGTGCTACATCGTACCCATCTTACTGTTGGTGTGGG‑GATCGCCCAGACCAAAACGCTGGCTAAGCTTGCCAATCATGc                                                                                                        <  2:346421/149‑1 (MQ=255)
                                            gCATTCTGCGATCTGACAGGTGTGCGTAATTGTCGCGATCTGACTGATTTTGGCAGAGAAATTCGCGCAACGGTGCTACAACGTACCCATCTTACTGTTGGTGTGGG‑GATCGCCCAGACCAAAACGCTGGCTAAGCTTGCCAATCATGc                                                                                                        >  3:21940/1‑149 (MQ=255)
                                             cATTCTGCGATCTGACAGGTGTGCGTAATTGTCGCGATCTGACTGATTTTGGCAGAGAAATTCGCGCAACTGTGCTACAACGTACCCATCTTACTGTTGGTGTGGG‑GATCGCCCAGACCAAAACGCTGGCTAAGCTTGCCAATCATGCg                                                                                                       <  1:253696/149‑1 (MQ=255)
                                               ttCTGCGATCTGACAGGTGTGCGTAATTGTCGCGATCTGACTGATTTTGGCAGAGAAATTCGCGCAACGGTGCTACAACGTACCCATCTTACTGTTGGTGTGGG‑GATCGCCCAGACCAAAACGCTGGCTAAGCTTGCCAATc                                                                                                            <  3:59393/142‑1 (MQ=255)
                                               ttCTGCGATCTGACAGGTGTGCGTAATTGTCGCGATCTGACTGATTTTGGCAGAGAAATTCGCGCAACGGTGCTACAACGTACCCATCTTACTGTTGGTGTGGG‑GATCGCCCAGACCAAAACGCTGGCTAAGCTTGCCAATc                                                                                                            >  4:59393/1‑142 (MQ=255)
                                               ttCTGCGATCTGACAGGTGTGCGTAATTGTCGCGATCTGACTGATTTTGGCAGAGAAATTCGCGCAACGGTGCTACAACGTACCCATCTTACTGTTGGTGTGGG‑GATCGCCCAGACCAAAACGCTGGCTAAGCTTGCCAATCa                                                                                                           >  4:81772/1‑143 (MQ=255)
                                               ttCTGCGATCTGACAGGTGTGCGTAATTGTCGCGATCTGACTGATTTTGGCAGAGAAATTCGCGCAACGGTGCTACAACGTACCCATCTTACTGTTGGTGTGGG‑GATCGCCCAGACCAAAACGCTGGCTAAGCTTGCCAATCa                                                                                                           <  3:81772/143‑1 (MQ=255)
                                                 cTGCGATCTGACAGGTGTGCGTAATTGTCGCGATCTGACTGATTTTGGCAGAGAAATTCGCGCAACGGTGCTACAACGTACCCATCTTACTGTTGGTGTGGG‑GATCGCCCAGACCAAAACGCTGGCTAAGCTTGCCAATCATGCGGCa                                                                                                    >  2:271203/1‑148 (MQ=255)
                                                  tGCGATCTGACAGGTGTGCGTAATTGTCGCGATCTGACTGATTTTGGCAGAGAAATTCGCGCAACGGTGCTACAACGTACCCATCTTACTGTTGGTGTGGG‑GATCGCCCAGACCAAAACGCTGGCTAAGCTTGCCAATCATGCGGCaa                                                                                                   >  6:207271/1‑148 (MQ=255)
                                                      aTCTGACAGGTGTGCGTAATTGTCGCGATCTGACTGATTTTGGCAGAGAAATTCGCGCAACGGTGCTACAACGTACCCATCTTACTGTTGGTGTGGG‑GATCGCCCAGACCAAAACGCTGGCTAAGCTTGCCAATCATGCGGCaaaaaaa                                                                                              >  2:300577/1‑149 (MQ=255)
                                                           aCAGGTGTGCGTAATTGTCGCGATCTGACTGATTTTGGCAGAGAAATTCGCGCAACGGTGCTACAACGTACCCATCTTACTGTTGGTGTGGG‑GATCGCCCAGACCAAAACGCTGGCTAAGCTTGCCAATCATGCGGCaaaaaaa                                                                                              <  8:339729/144‑1 (MQ=255)
                                                           aCAGGTGTGCGTAATTGTCGCGATCTGACTGATTTTGGCAGAGAAATTCGCGCAACGGTGCTACAACGTACCCATCTTACTGTTGGTGTGGG‑GATCGCCCAGACCAAAACGCTGGCTAAGCTTGCCAATCATGCGGCaaaaaaa                                                                                              <  3:266965/144‑1 (MQ=255)
                                                           aCAGGTGTGCGTAATTGTCGCGATCTGACTGATTTTGGCAGAGAAATTCGCGCAACGGTGCTACAACGTACCCATCTTACTGTTGGTGTGGG‑GATCGCCCAGACCAAAACGCTGGCTAAGCTTGCCAATCATGCGGCAAAAAAAt                                                                                             <  6:323158/145‑1 (MQ=255)
                                                           aCAGGTGTGCGTAATTGTCGCGATCTGACTGATTTTGGCAGAGAAATTCGCGCAACGGTGCTACAACGTACCCATCTTACTGTTGGTGTGGG‑GATCGCCCAGACCAAAACGCTGGCTAAGCTTGCCAATCATGCGGCAAAAAAATg                                                                                            <  5:207271/146‑1 (MQ=255)
                                                           aCAGGTGTGCGTAATTGTCGCGATCTGACTGATTTTGGCAGAGAAATTCGCGCAACGGTGCTACAACGTACCCATCTTACTGTTGGTGTGGG‑GATCGCCCAGACCAAAACGCTGGCTAAGCTTGCCAATCATGCGGCAAAAAAATGGCa                                                                                         <  1:300577/149‑1 (MQ=255)
                                                            cAGGTGTGCGTAATTGTCGCGATCTGACTGATTTTGGCAGAGAAATTCGCGCAACGGTGCTACAACGTACCCATCTTACTGTTGGTGTGGG‑GATCGCCCAGACCAAAACGCTGGCTAAGCTTGCCAATCATGCGGCAAAAAAATGGCAg                                                                                        <  1:403380/149‑1 (MQ=255)
                                                             aGGTGTGCGTAATTGTCGCGATCTGACTGATTTTGGCAGAGAAATTCGCGCAACGGTGCTACAACGTACCCATCTTACTGTTGGTGTGGG‑GATCGCCCAGACCAAAACGCTGGCTAAGCTTGCCAATCATGCGGCAAAAAAATGGCAGc                                                                                       <  8:219964/149‑1 (MQ=255)
                                                                  tgCGTAATTGTCGCGATCTGACTGATTTTGGCAGAGAAATTCGCGCAACGGTGCTACAACGTACCCATCTTACTGTTGGTGTGGG‑GATCGCCCAGACCAAAACGCTGGCTAAGCTTGCCAATCa                                                                                                           >  6:344899/1‑124 (MQ=255)
                                                                  tgCGTAATTGTCGCGATCTGACTGATTTTGGCAGAGAAATTCGCGCAACGGTGCTACAACGTACCCATCTTACTGTTGGTGTGGG‑GATCGCCCAGACCAAAACGCTGGCTAAGCTTGCCAATCa                                                                                                           <  5:344899/124‑1 (MQ=255)
                                                                  tgCGTAATTGTCGCGATCTGACTGATTTTGGCAGAGAAATTCGCGCAACGGTGCTACAACGTACCCATCTTACTGTTGGTGTGGG‑GATCGCCCAGACCAAAACGCTGGCTAAGCTTGCCAATCATGCGGCAAAAAAATGGCAGCGGCAg                                                                                  >  5:271007/1‑149 (MQ=255)
                                                                    cGTAATTGTCGCGATCTGACTGATTTTGGCAGAGAAATTCGCGCAACGGTGCTACAACGTACCCATCTTACTGTTGGTGTGGG‑GATCGCCCAGACCAAAACGCTGGCTAAGCTTGCCAATCATGCGGCAAAAAAATGGCAGCGGCAGAc                                                                                >  8:318620/1‑149 (MQ=255)
                                                                      tAATTGTCGCGATCTGACTGATTTTGGCAGAGAAATTCGCGCAACGGTGCTACAACGTACCCATCTTACTGTTGGTGTGGG‑GATCGCCCAGACCAAAACGCTGGCTAAGCTTGCCAATCATGCGGCAAAAAAATGGCAGCGGCAGACgg                                                                              >  8:353210/1‑149 (MQ=255)
                                                                        aTTGTCGCGATCTGACTGATTTTGGCAGAGAAATTCGCGCAACGGTGCTACAACGTACCCATCTTACTGTTGGTGTGGG‑GATCGCCCAGACCAAAACGCTGGCTAAGCTTGCCAATCATGCGGCAAAAAAATGGCAGCGGCAGACgggt                                                                            <  8:214804/149‑1 (MQ=255)
                                                                         ttGTCGCGATCTGACTGATTTTGGCAGAGAAATTCGCGCAACGGTGCTACAACGTACCCATCTTACTGTTGGTGTGGG‑GATCGCCCAGACCAAAACGCTGGCTAAGCTTGCCAATCATGCGGCAAAAAAATGGCAGCGGCAGACgggtg                                                                           <  2:189970/149‑1 (MQ=255)
                                                                            tCGCGATCTGACTGATTTTGGCAGAGAAATTCGCGCAACGGTGCTACAACGTACCCATCTTACTGTTGGTGTGGG‑GATCGCCCAGACCAAAACGCTGGCTAAGCTTGCCAATCATGCGGCAAAAAAATGGCAGCGGCAGACgggtggg                                                                         <  4:21940/148‑1 (MQ=255)
                                                                            tCGCGATCTGACTGATTTTGGCAGAGAAATTCGCGCAACGGTGCTACAACGTACCCATCTTACTGTTGGTGTGGG‑GATCGCCCAGACCAAAACGCTGGCTAAGCTTGCCAATCATGCGGCAAAAAAATGGCAGCGGCAGACgggtggg                                                                         <  7:44717/148‑1 (MQ=255)
                                                                              gcgATCTGACTGATTTTGGCAGAGAAATTCGCGCAACGGTGCTACAACGTACCCATCTTACTGTTGGTGTGGG‑GATCGCCCAGACCaa                                                                                                                                   <  8:352234/88‑1 (MQ=255)
                                                                              gcgATCTGACTGATTTTGGCAGAGAAATTCGCGCAACGGTGCTACAACGTACCCATCTTACTGTTGGTGTGGG‑GATCGCCCAGACCaa                                                                                                                                   >  7:352234/1‑88 (MQ=255)
                                                                                    tgactgaTTTTGGCAGAGAAATTCGCGCAACGGTGCTACAACGTACCCATCTTACTGTTGGTGTGGG‑GATCGCCCACACAAAAACGCAGGCTAAGCTACCCAATCATGCGGCAAAAAAATGGAAGCGGCATACGGCTGGGGATGTGGAt                                                                >  3:44575/1‑149 (MQ=255)
                                                                                      actgaTTTTGGCAGAGAAATTCGCGCAACGGTGCTACAACGTACCCATCTTACTGTTGGTGTGGG‑GATCGCCCAGACCAAAACGCTGGCTAAGCTTGCCAATCATGCGGCAAAAAAATGGCAGCGGCAGACGGGTGGGGTGGTGGAttt                                                              <  4:80409/149‑1 (MQ=255)
                                                                                      actgaTTTTGGCAGAGAAATTCGCGCAACGGTGCTACAACGTACCCATCTTACTGGTGGTGTGGG‑GATCGCCCAGACCAAAACGCTGGCTAAGCTTGCCAATCATGCGGCAAAAAAATGGCAGCGGCAGACGGGTGGGGTGGTGGa                                                                 <  6:134577/146‑1 (MQ=255)
                                                                                               ggCAGAGAAATTCGCGCAACGGTGCTACAACGTACCCATCTTACTGTTGGTGTGGG‑TATCGCCCAGACCAAAACGCTGGCTAAGGTTGCCAATCATGCGGCAAAAAAATGGCAGCGGCAGACGGGTGGGGTGGTGGATTTATCAAATc                                                      <  5:53141/148‑1 (MQ=255)
                                                                                               ggCAGAGAAATTCGCGCAACGGTGCTACAACGTACCCATCTTACTGTTGGTGTGGG‑GATCGCCCAGACCAAAACGCTGGCAAAGCTTGCCAATAATGCGGCAAAAAAATGGCATCGGCAGACGGGTGGGTTGGTGGATTTATCAAAtat                                                     >  6:280627/1‑147 (MQ=255)
                                                                                                gCAGAGAAATTCGCGCAACGGTGCTACAACGTACCCATCTTACTGTTGGTGTGGG‑GATCGCCCAGACCAAAACGCTGGCTAAGCTTGCCAATCATGCGGCAAAAAAATGGCAGCGGCAGACGGGTGGGGTGGTGGATTTATCAAATCt                                                     <  6:136041/148‑1 (MQ=255)
                                                                                                 cAGAGAAATTCGCGCAACGGTGCTACAACGTACCCATCTTACTGTTGGTGTGGG‑GATCGCCCAGACCAAAACGCTGGCTAAGCTTGCCAATCATGCGGCAAAAAAATGGCAGCGGCAGACGGGTGGGGTGGTGGATTTATCAAATCTg                                                    >  2:403057/1‑148 (MQ=255)
                                                                                                  agagAAATTCGCGCAACGGTGCTACAACGTACCCATCTTACTGTTGGTGTGGG‑GATCGCCCAGACCAAAACGCTGGCTAAGCTTGCCAATCATGCGGCAAAAAAATGGCAGCGGCAGACGGGTGGggtggt                                                                    >  2:75700/1‑131 (MQ=255)
                                                                                                  agagAAATTCGCGCAACGGTGCTACAACGTACCCATCTTACTGTTGGTGTGGG‑GATCGCCCAGACCAAAACGCTGGCTAAGCTTGCCAATCATGCGGCAAAAAAATGGCAGCGGCAGACGGGTGGggtggt                                                                    <  1:75700/131‑1 (MQ=255)
                                                                                                   gagaAATTCGCGCAACGGTGCTACAACGTACCCATCTTACTGTTGGTGTGGG‑GATCGCCCAGACCAAAACGCTGGCTAAGCTTGCCAATCATGCGGCAAAAAAATGGCAGCGGCAGACGGGTGGGGTGGTGGATTTATCAAATCTGGaa                                                 >  3:10828/1‑149 (MQ=255)
                                                                                                        aTTCGCGCAACGGTGCTACATGGTACGCATCTTAATGTTTGTTTGGG‑GATCGCACAGACCAAATCGCGTGCTATGATTGCCATTCATGCGGCAAAAAAATGGCAGCGGCAGACGGGTGGGGTTGTGGATTTATGATATCTGGAACGCCa                                            <  4:44575/149‑1 (MQ=255)
                                                                                                        aTTCGCGCAACGGTGCTACAACGTACCCATCTTACTGTTGGTGTGGG‑GATCGCCCAGCCCAAAACGCTGGCTAAGCTTGCCAATCATGCGGCAAAAAAATGGCAGCGGCAGACGGGTGGGGTGGTGGATTTATCAAATCTGGAACGc                                              >  8:336709/1‑147 (MQ=255)
                                                                                                              gcAACGGTGCTACAACGTACCCATCTTACTGTTGGTGTGGG‑GATCGCCCAGACCAAAACGCTGGCTAAGCTTGCCAATCATGCGGCAAAAAAATGGCAGCGGCAGACGGGTGGGGTGGTGGATTTATCAAATCTGGAACGCCAGCGTa                                       >  2:50471/1‑148 (MQ=255)
                                                                                                                 aCGGTGCTACAACGTACCCATCTTACTGTTGGTGTGGG‑GATCGCCCAGACCAAAACGCTGGCTAAGCTTGCCAATCATGCGGAAAAAAAATGGCAGCGGCAGACGGGTGGGGTGGTGGATTTATCAAATCTGGAACGCCAGCGTAAAt                                    >  1:294980/1‑148 (MQ=255)
                                                                                                                   ggTGCTACCACGTATCCATCTTACTGTTGGTGTGGG‑GATCGCCCAGACCAAAACGCTGGCTAAGCTTGCCAATCATGCGGCAAAAAAATGGCAGCGGCAGACGGGTGGGGTGGTGGATTTATCAAATCTGGAACGCCAGCGTAAATTaa                                 <  5:183375/149‑1 (MQ=255)
                                                                                                                    gTGCTACAACGAACCCATCTTACTGTTGGTGTGGG‑GATCGCCCAGACCAAAACGCTGGCTAAGCTTGCCAATCATGCGGCAAAAAAATGGCAGCGGCAGACGGGTGGGGTGGTGGATTTATCAAATCTGGAACGCCAGCGTAAATTAAt                                <  3:9531/149‑1 (MQ=255)
                                                                                                                     tGCTACAACGTACCCATCTTACTGTTGGTGTGGG‑GATCGCCCAGACCAAAACGCTGGCTAAGCTTGCCAATCATGCGGCAAAAAAATGGCAGCGGCAGACGGGTGGGGTGGTGGATTTATCAAATCTGGAACGCCAGCGTAAATTAATg                               >  6:403056/1‑149 (MQ=255)
                                                                                                                                    aTCTTACAGTTGGTCTGGG‑GATATACCACACCAAACCTCTGGCTAAGCTTGAAAATCATGCGGCAAAAAAATGGCAGCGGCAGACGGGTGGCGAGGTGTATTTATCAAATCTCTAACGCCAGCGTAAATTAATTTATGCTCACCCAGTg                >  2:279478/1‑149 (MQ=255)
                                                                                                                                     tcataatGTTGGTGTGGC‑GATCGCCCAGACCAAAACGCAGGCTAAGCTTGCCAATCATTCGGCAAAAAAATGGCAGCGGCAGACGGGTGTGGTGGTGGATTTATCAAATCTGTAACGCCAGCGTAAATTAATGTCTGCTCTCCCCGTgg               <  2:294980/143‑1 (MQ=255)
                                                                                                                                     tCTTACTGTTGGTGTGGG‑GATCGCCCAGACCAAAACGCTGGCTAAGCTTGCCAATCATGCGGCAAAAAAATGGCAGCGGCAGACGGGTGGGGTGGTGGATTTATCAAATCTGGAACGCCAGCGTAAATTAATGTCTGCTCTCCCCGTg                >  7:71572/1‑148 (MQ=255)
                                                                                                                                     tCTTACTGTTGGTGTGGG‑GATCGCCCAGACCAAAACGCTGGCTAAGCTTGCCAATCATGCGGCAAAAAAATGGCAGCGGCAGACGGGTGGGGTGGTGGATTTATCAAATCTGGAACGCCAGCGTAAATTAATGTCTGCTCTCCCCGTg                >  7:54113/1‑148 (MQ=255)
                                                                                                                                         aCTGTTGGTGTGGG‑GATCGCCCAGACCAAAACGCTGGCTAAGCTTGCCAATCATGCGGCAAAAAAATGGCAGCGGCAGACGGGTGGGGTGGTGGATTTATCAAATCTGGAACGCCAGCGTAAATTAATGTCTGCTCTCCCCGTGGa              <  7:353210/146‑1 (MQ=255)
                                                                                                                                          cTGTTGGTGTGGG‑GATCGCCCAGACCAAAACGCTGGCTAAGCTTGCCAATCATGCGGCAAAAAAATGGCAGCGGCAGACGGGTGGGGTGGTGGATTTATCAAATCTGGAACGCCAGCGTAAATTAATGTCTGCTCTCCCCGTGGATGa           <  8:71572/148‑1 (MQ=255)
                                                                                                                                             ttGGTGTGGG‑GATCGCCCAGACCAAAACGCTGGCTAAGCTTGCCAATCATGCGGCAAAAAAATGGCAGCGGCAGACGGGTGGGGTGGTGGATTTATCAAATCTGGAACGCCAGCGTAAATTAATGTCTGCTCTCCCCGTGGATGACGTc       >  7:64604/1‑149 (MQ=255)
                                                                                                                                             ttGGTGTGGG‑GATCGCCCAGACCAAAACGCTGGCTAAGCTTGCCAATCATGCGGCAAAAAAATGGCAGCGGCAGACGGGTGGGGTGGTGGATTTATCAAATCTGGAACGCCAGCGTAAATTAATGTCTGCTCTCCCCGTGGATGACGTc       <  7:318620/149‑1 (MQ=255)
                                                                                                                                                 tgtgGG‑GATCGCCCAGACCAAAACGCTGGCTAAGCTTGCCAATCATGCGGCAAAAAAATGGCAGCGGCAGACGGGTGGGGTGGTGGAtt                                                               <  2:40264/89‑1 (MQ=255)
                                                                                                                                                 tgtgGG‑GATCGCCCAGACCAAAACGCTGGCTAAGCTTGCCAATCATGCGGCAAAAAAATGGCAGCGGCAGACGGGTGGGGTGGTGGAtt                                                               >  1:40264/1‑89 (MQ=255)
                                                                                                                                                  gtgGG‑GATCGCCCAGACCAAAACGCTGGCTAAGCTTGCCAATCATGCGGCAAAAACATGGCAGCGGCAGCCGGGTGGGGTGGTGGATTTATCAAATCTGGAACGCCAGCGTAAATTAATGTCTGCTCTCGCCGTGGAGGCCGTCTgggg  >  4:145798/1‑149 (MQ=255)
                                                                                                                                                  gtgGG‑GATCGCCCAGACCAAAACGCTGGCTAAGCTTGCCAATCATGCGGCAAAAAAATGGCAGCGGCAGACGGGTGGGGTGGTGGATTTATCAAATCTGGAACGCCAGCGTAAATTAATGTCTGCTCTCCCCGTGGATGACGTCTgggg  >  1:401229/1‑149 (MQ=255)
                                                                                                                                                  |                                                                                                                                                     
TGGAAGAGCTATCGCCCCGCGTCGAGATTTACAGTATTGATGAGGCATTCTGCGATCTGACAGGTGTGCGTAATTGTCGCGATCTGACTGATTTTGGCAGAGAAATTCGCGCAACGGTGCTACAACGTACCCATCTTACTGTTGGTGTGGG‑GATCGCCCAGACCAAAACGCTGGCTAAGCTTGCCAATCATGCGGCAAAAAAATGGCAGCGGCAGACGGGTGGGGTGGTGGATTTATCAAATCTGGAACGCCAGCGTAAATTAATGTCTGCTCTCCCCGTGGATGACGTCTGGGG  >  NC_000913/1231448‑1231742

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑