| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 1,602,734 | C→G | 5.8% | A415A (GCC→GCG) | lsrA → | autoinducer 2 import ATP‑binding protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 1,602,734 | 0 | C | G | 5.8% | 235.1 / 5.5 | 69 | A415A (GCC→GCG) | lsrA | autoinducer 2 import ATP‑binding protein |
| Reads supporting (aligned to +/- strand): ref base C (34/31); new base G (2/2); total (36/33) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 5.25e-01 | |||||||||||
TCATAACCTTCGTGGATTCTGGGCGAAAACCGCGAAAGATAATGCCACCCTGGAACGTTATCGTCGGGCGCTGAATATTAAATTCAACCAACCGGAACAAGCTGCACGGACATTATCCGGTGGCAACCAGCAAAAAATCCTCATTGCCAAATGCTTGGAAGCTTCGCCGCAAGTATTGATTGTCGATGAGCCGACGCGCGGCGTGGATGTCTCGGCCCGTAATGATATCTACCAGCTGTTGCGCAGCATCGCCGCACAAAATGTGGCTGTGCTGCTTATCTCCTCCGACCT > NC_000913/1602587‑1602877 | tCATAACCTTCGTGGATTCTGGGTGAAAACCGCGAAAGATAATGCCACCCTGGAACGTTATCGTCGGGCGCTGAATATTAAATTCAACCAACCGGAACAAGCTACACGGACATTATCCGGTGGCAACCAGCAAAAAATCCTCATTGcc > 3:161949/1‑148 (MQ=255) aTAACCTTCGTGGATTCTGGGCGAAAACCGCGAAAGATAATGCCACCCTGGAACGTTATCGTCGGGCGCTGAATATTAAATTCAACCAACCGGAACAAGCTGCACGGACATTATCCGGTGGCAACCAGCAAAAAATCCTCATTGCCaaa > 7:12399/1‑149 (MQ=255) aTAACCTTCGTGGATTCTGGGCGAAAACCGCGAAAGATAATGCCACCCTGGAACGTTATCGTCGGGCGCTGAATATTAAATTCAACCAACCGGAACAAGCTGCACGGACATTATCCGGTGGCAACCAGCAAAAAATCCTCATTGCCaaa > 5:114533/1‑149 (MQ=255) aCCTTCGTGGATTCTGGGCGAAAACCGCGAAAGATAATGCCACCCTGGAACGTTATCGTCGGGCGCTGAATATTAAATTCAACCAACCGGAACAAGCTGCACGGACATTATCCGGTGGCAACCAGCAAAAAATCCTCATTGCCAAATg < 6:8131/148‑1 (MQ=255) cTTCGTGGATTCTGGGTGAAAACCGCGAAAGATAATGCCACCCTGGAACGTTATCGTCGGGCGCTGAATATTAAATTCAACCAACCGGAACAAGCTGCACGGACATTATCCGGTGGCAACCAGCAAAAAATCCTCATTGCCAAATGCtt < 8:33689/149‑1 (MQ=255) gTGGATTCTGGGCGAAAACCGCGAAAGATAATGCCACCCTGGAACGTTATCGTCGGGCGCTGAATATTAAATTCAACCAACCGGAACAAGCTGCACGGACATTATCCGGTGGCAACCAGCAAAAAATCCTCATTGCCAAATGCTTGGaa < 4:129400/149‑1 (MQ=255) gTGGATTCTGGGCGAAAACCGCGAAAGATAATGCCACCCTGGAACGTTATCGTCGGGCGCTGAATATTAAATTCAACCAACCGGAACAAGCTGCACGGACATTATCCGGTGGCAACCAGCAAAAAATCCTCATTGCCAAATGCTTGGaa < 5:86516/149‑1 (MQ=255) tGGATTCTGGGCGAAAACCGCGAAAGATAATGCCACCCTGGAACGTTATCGTCGGGCGCTGAATATTAAATTCAACCAACCGGAACAAGCTGCACGGACATTATCCGGTGGCAACCAGCAAAAAATCCTCATTGCGAAATGCTTGGAAg > 3:307985/1‑149 (MQ=255) ggATTCTGGGCGAAAACCGCGAAAGATAATGCCACCCTGGAACGTTATCGTCGGGCGCTGAATATTAAATTCAACCAACCGGAACAAGCTGCACGGACATTATCCGGTGGCAACCAGCAAAAAATCCTCATTGCCAAATGCTTGGAAGc > 7:208069/1‑149 (MQ=255) ggATTCTGGGCGAAAACCGCGAAAGATAATGCCACCCTGGAACGTTATCGTCGGGCGCTGAATATTAAATTCAACCAACCGGAACAAGCTGCACGGACATTATCCGGTGGCAACAAGCAAAAAATCCTCATTGCCAAATGCTTGGAAGc > 2:277487/1‑149 (MQ=255) cGAAAACCGCGAAAGATAATGCCACCCTGGAACGTTATCGTCGGGCGCTGAATATTAAATTCAACCAACCGGAACAAGCTGCACGGACATTATCCGGTGGCAACCAGCAAAAAATCCTCATTGCGAAATGCTTGGAAGCTTCGCCGCaa < 4:307985/149‑1 (MQ=255) cGAAAACCGCGAAAGATAATGCCACCCTGGAACGTTATCGTCGGGCGCTGAATATTAAATTCAACCAACCGGAACAAGCTGCACGGACATTATCCGGTGGCAACCAGCAAAAAATCCTCATTGCCAAATGCTTGGAAGCTTCGCCGCaa < 8:208069/149‑1 (MQ=255) aaaCCGCGAAAGATAATGCCACCCTGGAACGTTATCGTCGGGCGCTGAATAATAAATTCAACCAACCGGAACAAGCTGCACGGACATTATCCGGTGGAAACCAGCAAAAAATCCTCATTGCCAAATGCTTGGAAGCTTCGCCGCAAGTa > 7:377652/1‑149 (MQ=255) aCCGCGAAAGATAATGCCACCCTGGAACGTTATCGTCGGGCGCTGAATATTAAATTCAACCAACCGGAACAAGCTGCACGGACATTATCCGGTGGCAACCAGCAAAAAATCCTCATTGCCAAATGCTTGGAAGCTTCGCCGCAAGTatt < 6:400800/149‑1 (MQ=255) gcgAAAGATAATGCCACCCTGGAACGTTATCGTCGGGCGCTGAATATTAAATTCAACCAACCGGAACCAGCTGCACGGACATTATCCGGTGGCAACCAGCAAAAAATCCTCATTGCCAAATGCTTGGAAGCTTCGCCGCAAGTcttgat < 2:126056/149‑1 (MQ=255) gcgAAAGATAATGCCACCCTGGAACGTTATCGTCGGGCGCTGAATATTAAATTCAACCAACCGGAACAAGCTGCACGGACATTATCCGGTGGCAACCAGCAAAAAATCCTCATTGCGAAATGCTTGGAAGCTTCGCCGCAAGTattgat > 7:166272/1‑149 (MQ=255) cgAAAGATAATGCCACCCTGGAACGTTATCGTCGGGCGCTGAATATTAAATTCAACCAACCGGAACAAGCTGCACGGACATTATCCGGTGGCAACCAGCAAAAAATCCTCATTGCCAAATGCTTGGAAGCTTCGCCGCAAGTattgatt > 2:38875/1‑149 (MQ=255) gAAAGATAATGCCACCCTGGAACGTTATCGTCGGGCGCTGAATATTAAATTCAACCAACCGGAACAAGCTGCACGGACATTATCCGGTGGCAACCAGCAAAAAATCCTCATTGCCAAATGCTTGGAAGCTTCGCCGCAAGTattgattg < 2:405822/149‑1 (MQ=255) aaGATAATGCCACCCTGGAACGTTATCGTCGGGCGCTGAATATTAAATTCAACCAACCGGAACAAGCTGCACGGACATTATCCGGTGGCAACCAGCAAAAAATCCTCATTGCCAAATGCTTGGAAGCTTCGCCGCAAGTATTGATTGTc < 8:307469/149‑1 (MQ=255) gCCACCCTGGAACGTTATCGTCGGGCGCTGAATATTAAATTCAACCAACCGGAACAAGCTGCACGGACATTATCCGGTGGCAACCAGCAAAAAATCCTCATTGCCAAATGCTTGGAAGCTTCGCCGCaa < 3:363594/129‑1 (MQ=255) gCCACCCTGGAACGTTATCGTCGGGCGCTGAATATTAAATTCAACCAACCGGAACAAGCTGCACGGACATTATCCGGTGGCAACCAGCAAAAAATCCTCATTGCCAAATGCTTGGAAGCTTCGCCGCaa > 4:363594/1‑129 (MQ=255) cACCCTGGAACGTTATCGTCGGGCGCTGAATATTAAATTCAACCAACCGGAACAAGCTGCACGGACATTATCCGGTGGCAACCAGCAAAAAATCCTCATTGCCAAATGCTTGGAAGCTTCGCCGCAAGTATTGATTGTCGATGAGCCGa > 6:401519/1‑149 (MQ=255) ccTGGAACGTTATCGTCGGGCGCTGAATATTAAATTCAACCAACCGGAACAAGCTGCACGGACATTATCCGGTGGCAACCAGCAAAAAATCCTCATTGCCAAATGCTTGGAAGCTTCGCCGCAAGTATTGATTGTCGATGAGCCGAcgc < 8:193303/149‑1 (MQ=255) tGGAACGTTATCGTCGGGCGCTGAATATTAAATTCAACCAACCGGAACAAGCTGCACGGACATTATCCGGTGGCAACCAGCAAAAAATCCTCATTGCCAAATGCTTgg > 8:341590/1‑108 (MQ=255) tGGAACGTTATCGTCGGGCGCTGAATATTAAATTCAACCAACCGGAACAAGCTGCACGGACATTATCCGGTGGCAACCAGCAAAAAATCCTCATTGCCAAATGCTTgg < 7:341590/108‑1 (MQ=255) gTTATCGTCGGGCGCTGAATATTAAATTCAACCAACCGGAACAAGCTGCACGGACATTATCCGGTGGCAACCAGCAAAAAATCCTCATTGCCAAATGCTTg > 8:129348/1‑101 (MQ=255) gTTATCGTCGGGCGCTGAATATTAAATTCAACCAACCGGAACAAGCTGCACGGACATTATCCGGTGGCAACCAGCAAAAAATCCTCATTGCCAAATGCTTg < 7:129348/101‑1 (MQ=255) gTTATCGTCGGGCGCTGAATATTAAATTCAACCAACCGGAACAAGCTGCACGGACATTATCCGGTGGCAACCAGCAAAAAATCCTCATTGCCAAATGCTTGGAAGCTTCGACGCAAGTATTGATTGTCGATGAGCCGACGCGCGCCGTg > 1:404945/1‑149 (MQ=255) gggCGCTGAATATTAAATTCAACCAACCGGAACAAGCTGCACGGACATTATCCGGTGGCAACCAGCAAAAAATCCTCATTGCCAAATGCTTGGAAGCTTCGCCGCAAGTATTGATTGTCGATGAGCCGACGCGCGGCGTGGATGTCTCg < 5:23571/149‑1 (MQ=255) gcTGAATATTAAATTCAACCAACCGGAACAAGCTGCACGGACATTATCCGGTGGCAACCAGCAAAAAATCCTCATTGCCAAATGCTTGGAAGCTTCGCCGCAAGTATTGATTGTCGATGAGCCGACGCGCGGCGTGGATGTCTCGGccc < 4:353778/149‑1 (MQ=255) aaTTTTAAATTCAACCAACCGGATCAAGCTGCACTGACATTATCCGGTGGCAACCAGCAAAAAATCCTCATTGCCAAATGCTTGGAAGCTTCGCCGCAAGTATTGATTGTCGATGAGCCGAcgcgcg < 4:98550/127‑1 (MQ=255) aaTATTAAATTCAACCAACCGGAACAAGCTGCACGGACATTATCCGGTGGCAACCAGCAAAAAATCCTCATTGCCAAATGCTTGGAAGCTTCGCCGCAAGTATTGATTGTCGATGAGCCGACGCGCGGCGTGGATGTCTCGGCCCGTaa > 7:300615/1‑149 (MQ=255) aaTATTAAATTCAACCAACCGGAACAAGCTGCACGGACATTATCCGCTGTCAACCAGCAAAAAATACTCATTGCCAAATGCTTGGAAGCTTCGCCGCAAGTAATGATTGTCCATGAGCCGAcgcgcg > 3:98550/1‑127 (MQ=255) tatTAAATTCAACCAACCGGAACAAGCTGCACGGACATTATCCGGTGGCAACCAGCAAAAAATCCTCATTGCCAAATGCTTGGAAGCTTCGCCGCAAGTATTGATTGTCGATGAGCCGACGCGCGGCGTGGATGTCTCGGCCCGTAAt > 8:99538/1‑148 (MQ=255) atTAAATTCAACCAACCGGAACAAGCTGCACGGACATTATCCGGTGGCAACCAGCAAAAAATCCTCATTGCCAAATGCTTGGAAGCTTCGCCGCaa > 3:134514/1‑96 (MQ=255) atTAAATTCAACCAACCGGAACAAGCTGCACGGACATTATCCGGTGGCAACCAGCAAAAAATCCTCATTGCCAAATGCTTGGAAGCTTCGCCGCaa < 4:134514/96‑1 (MQ=255) ttAAATTCAACCAACCGGAACAAGCTGCACGGACATTATCCGGTGGCAACCAGCAAAAAATCCTCATTGCCAAATGCTTGGAAGCTTCGCCGCAAGTATTGATTGTCGATGAGCCGACGCGCGGCGTGGATGTCTCGGCCCGTAATGa < 6:114533/148‑1 (MQ=255) aaaTTCAACCAACCGGAACAAGCTGCACGGACATTATCCGGTGGCAACCAGCAAAAAATCCTCATTGCCAAATGCTTGGAAGCTTCGCCGCAAGTATTGATTGTCGATGAGCCGACGCGCGGCGTGGATGTCTCGGCCCGTAATGatat > 7:83345/1‑149 (MQ=255) aaTTCAACCAACCGGAACAAGCTGCACGGACATTATCCGGTGGCAACCAGCAAAAAATCCTCATTGCCAAATGCTTGGAAGCTTCGCCGCAAGTATTGATTGTCGATGAGCCGACGCGCGGCGTGGATGTCTCGGCCCGTAATGatat < 2:254768/148‑1 (MQ=255) ccaaccGGAACAAGCTGCACGGACATTATCCGGTGGCAACCAGCAAAAAATCCTCATTGCCAAATGCTTGGAAGCTTCGCCGCAAGTATTGATTGTCGATGAGCCGACGCGCGGCGTGGATGTCTCGGCCCGTAATGATATCTACCAGc < 1:277487/149‑1 (MQ=255) caaccGGAACAAGCTGCACGGACATTATCCGGTGGCAACCAGCAAAAAATCCTCATTGCGAAATGCTTGGAAGCTTCGCCGCAAGTATTGATTGTCGATGAGCCGACGCGCGGCGTGGATGTCTCGGCCCGTAATGATATCTACCAGCt < 8:166272/149‑1 (MQ=255) aaccGGAACAAGCTGCACGGACATTATCCGGTGGCAACCAGCAAAAAATCCTCATTGCCAAATGCTTGGAAGCTTCGCCGCAAGTATTGATTGTCGATGAGCCGACGCGCGGCGTGGATGTCTCGGCCCGTAATGATATCTACCAGCTg > 4:172210/1‑149 (MQ=255) gCTGCACGGACATTATCCGGTGGCAACCAGCAAAAAATCCTCATTGCCAAATGCTTGGAAGCTTCGCCGCAAGTATTGATTGTCGATGAGCCGACGCGCGGCGTGGATGTCTCGGCCCGTAATg > 5:114670/1‑124 (MQ=255) gCTGCACGGACATTATCCGGTGGCAACCAGCAAAAAATCCTCATTGCCAAATGCTTGGAAGCTTCGCCGCAAGTATTGATTGTCGATGAGCCGACGCGCGGCGTGGATGTCTCGGCCCGTAATg < 6:114670/124‑1 (MQ=255) gCTGCACGGACATTATCCGGTGGCAACCAGCAAAAAATCCTCATTGCCAAATGCTTGGAAGCTTCGCCGCAAGTATTGATTGTCGATGAGCCGACGCGCGGCGTGGATGTCTCGGCCCGTAATGATATCTACCAGCTGTTGCGCAGCAt > 7:196396/1‑149 (MQ=255) cTGCACGGACATTATCCGGTGGCAACCAGCAAAAAATCCTCATTGCCAAATGCTTGGAAGCTTCGCCGCAAGTATTGATTGTCGATGAGCCGACGCGCGGCGTGGAGGGCTCGGCCCGTAATGATATCTACCAGCTGTTGCGCAGCATc < 3:6858/149‑1 (MQ=255) aCGGACATTATCCGGTGGCAACCAGCAAAAAATCCTCATTGCCAAATGCTTGGAAGCTTCGCCGCAAGTATTGATTGTCGATGAGCCGACGCGCGGCGTGGATGTCTCGGCCCGTAATGATATCTACCAGCTGTTGCGCAGCATcgccg > 1:52897/1‑149 (MQ=255) aCGGACATTATCCGGTGGCAACCAGCAAAAAATCCTCATTGCCAAATGCTTGGAAGCTTCGCCGCAAGTATTGATTGTCGATGAGCCGACGCGCGGCGTGGATGTCTCGGCCCGTAATGATATCTACCAGCTGTTGCGCAGCATcgccg > 7:247264/1‑149 (MQ=255) ggACATTATCCGGTGGCAACCAGCAAAAAATCCTCATTGCCAAATGCTTGGAAGCTTCGCCGCAAGTATTGATTGTCGATGAGCCGACGCTCGGCGTGGATGTCTCGGCCCGTAATGATATCTACCAGCTGTTGCGCAGCATCGCCGca > 1:345826/1‑149 (MQ=255) ggACATTATCCGGTGGCAACCAGCAAAAAATCCTCATTGCCAAATGCTTGGAAGCTTCGCCGCAAGTATTGATTGTCGATGAGCCGACGCGCGGCGTGGATGTCTCGGCCCGTAATGATATCTACCAGCTGTTGCGCAGCATCGCCGca > 7:323446/1‑149 (MQ=255) ggACATTATCCGGTGGCAACCAGCAAAAAATCCTCATAGCCAAAAGCTTGGAAGCTTCGACGCAAGAATTGATTGTCGATGAGCCGACGCTCGGCGTGGATGTCTCGGCCCGTAATCATATATACCAGATGTTGCCCAGCATACCCGca > 3:132394/1‑149 (MQ=255) ttATCCGGTGGCAACCAGCAAAAAATCCTCATTGCCAAATGCTTGGAAGCTTCGCCGCAAGTATTGATTGTCGATCAGCCGACGCGCGGCGTGGATGTCTCGGCCCGTAATGATATCTACCAGCTGTTGCGCAGCATCGCCGCACaaaa > 3:110310/1‑149 (MQ=255) tCCGGTGGCAACCAGCAAAAAATCCTCATTGCCAAATGCTTGGAAGCTTCGCCGCAAGTATTGATTGTCGATGAGCCGACGCGCGGCGTGGATGTCTCGGCCCGTAATGATATCTACCAGCTGTTGCGCAGCATCGCCGCACAAAAtgt < 8:247264/149‑1 (MQ=255) tCCGGTGGCAACCAGCAAAAAATCCTCATTGCCAAATGCTTGGAAGCTTCGCCGCAAGTATTGATTGTCGATGAGCCGACGCGCGGCGTGGATGTCTCGGCCCGTAATGATATCTACCAGCTGTTGCGCAGCATCGCCGCACAAAAtgt < 3:172210/149‑1 (MQ=255) cGGTGGCAACCAGCAAAAAATCCTCATTGCCAAATGCTTGGAAGCTTCGCCGCAAGTATTGATTGTCGATGCGCCGACGCGCGGCGTGGATGTCTCGGCCCGTAATGATATCTACCAGCTGTTGCGCAGCATCGCCGCACAAAATGTgg > 3:361114/1‑149 (MQ=255) cGGTGGCAACCAGCAAAAAATCCTCATTGCCAAATGCTTGGAAGCTTCGCCGCAAGTATTGATTGTCGATGAGCCGACGCGCGGCGTGGATGTCTCGGCCCGTAATGATATCTACCAGCTGTTGCGCAGCATCGCCGCACAAAATGTgg < 1:38875/149‑1 (MQ=255) gTGGCAACCAGCAAAAAATCCTCATTGCCAAATGCTTGGAAGCTTCGCCGCAAGTATTGATTGTCGATGAGCCGACGCGCGGCGTGGATGTCTCGGCCCGTAATGATATCTACCAGCTGTTGCGCAGCATCGCCGCACAAAATGTGGCt < 8:30079/149‑1 (MQ=255) gTGGCAACCAGCAAAAAATCCTCATTGCCAAATGCTTGGAAGCTTCGCCGCAAGTATTGATTGTCGATGAGCCGACGCGCGGCGTGGATGTCTCGGCCCGTAATGATATCTACCAGCTGTTGCGCAGCATCGCCGCACAAAATGTGGCt > 7:30079/1‑149 (MQ=255) gCAACCAGCAAAAAATCCTCATTGCCAAATGCTTGGAAGCTTCGCCGCAAGTATTGATTGTCGATGAGCCGACGCGCGGCGTGGATGTCTCGGCCCGTAATGATATCTACCAGCTGTTGCGCAGCATCGCCGCACAAAATGTGGCtgtg < 8:323446/149‑1 (MQ=255) gCAACCAGCAAAAAATCCTCATTGCCAAATGCTTGGAAGCTTCGCCGCAAGTATTGATTGTCGATGAGCCGACGCGCGGCGTGGATGTCTCGGCCCGTAATGATATCTACCAGCTGTTGCGCAGCATCGCCGCACAAAATGTGGCtgtg < 5:401519/149‑1 (MQ=255) aaCCAGCAAAAAATCCTCATTGCCAAATGCTTGGAAGCTTCGCCGCAAGTATTGATTGTCGATGAGCCGACGCGCGGCGTGGATGTCTCGGCCCGTAATGATATCTACCAGCTGTTGCGCAGCATCGCCGCACAAAATGTGGCTGtgct > 2:252384/1‑149 (MQ=255) aaaaaaTCCTCATTGCCAAATGCTTGGAAGCTTCGCCGCAAGTATTGATTGTCGATGAGCCGACGCGCGGCGTGGATGTCTCGGCCCGTAATGATATCTACCAGCTGTTGCGCAGCATCGCCGCACAAAATGTGGCTGTGCTGCTTAtc > 8:2881/1‑149 (MQ=255) aaaaaaTCCTCATTGCCAAATGCTTGGAAGCTTCGCCGCAAGTATTGATTGTCGATGAGCCGACGCGCGGCGTGGATGTCTCGGCCCGTAATGATATCTACCAGCTGTTGCGCAGCATCGCCGCACAAAATGTGGCTGTGCTGCTTAt > 4:251764/1‑148 (MQ=255) aaaaaTCCTCATTGCCAAATGCTTGGAAGCTTCGCCGCAAGTATTGATTGTCGATGAGCCGACGCGCGGCGTGGATGTCTCGGCCCGTAATGATATCTACCAGCTGTTGCgca > 5:253235/1‑113 (MQ=255) aaaaaTCCTCATTGCCAAATGCTTGGAAGCTTCGCCGCAAGTATTGATTGTCGATGAGCCGACGCGCGGCGTGGATGTCTCGGCCCGTAATGATATCTACCAGCTGTTGCgca < 6:253235/113‑1 (MQ=255) tCATTGCCAAATGCTTGGAAGCTTCGCCGCAAGTATTGATTGTCGATGAGCCGACGCGCGGCGTGGATGTCTCGGCCCGTAATGATATCTACCAGCTGTTGCGCAGGATCGCCGCACAAAATGTGGCTGTGCTGCTTATCTCCTCCGAc > 1:95675/1‑149 (MQ=255) aTTGCCAAATGCTTGGAAGCTTCGCCGCAAGTATTGATTGTCGATGAGCCGACGCGCGGCGTGGATGTCTCGGCCCGTAATGATATCTACCAGCTGTTGCGCAGCATCGCCGCACAAAATGTGGCTGTGCTGCTTATCTCCTCCGACCt < 4:161949/149‑1 (MQ=255) aTTGCCAAATGCTTGGAAGCTTCGCCGCAAGTATTGATTGTCGATGAGCCGACGCGCGGCGTGGATGTCTCGGCCCGTAATGATATCTACCAGCTGTTGCGCAGCATCGCCGCACAAAATGTGGCTGTGCTGCTTATCTCCTCCGACCt > 4:98091/1‑149 (MQ=255) tGCCAAATGCTTGGAAGCTTCGCCGCAAGTATTGATTGTCGATGAGCCGACGCGCGGCGTGGATGTCTCGGCCCGTAATGATATCTACCAGCTGtt < 1:72458/96‑1 (MQ=255) tGCCAAATGCTTGGAAGCTTCGCCGCAAGTATTGATTGTCGATGAGCCGACGCGCGGCGTGGATGTCTCGGCCCGTAATGATATCTACCAGCTGtt > 2:72458/1‑96 (MQ=255) | TCATAACCTTCGTGGATTCTGGGCGAAAACCGCGAAAGATAATGCCACCCTGGAACGTTATCGTCGGGCGCTGAATATTAAATTCAACCAACCGGAACAAGCTGCACGGACATTATCCGGTGGCAACCAGCAAAAAATCCTCATTGCCAAATGCTTGGAAGCTTCGCCGCAAGTATTGATTGTCGATGAGCCGACGCGCGGCGTGGATGTCTCGGCCCGTAATGATATCTACCAGCTGTTGCGCAGCATCGCCGCACAAAATGTGGCTGTGCTGCTTATCTCCTCCGACCT > NC_000913/1602587‑1602877 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |