Predicted mutation
evidence seq id position mutation freq annotation gene description
RA NC_000913 1,662,350 C→T 100% P599S (CCC→TCC)  ynfF → S‑ and N‑oxide reductase, A subunit, periplasmic

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009131,662,3500CT100.0% 273.4 / ‑6.7 82P599S (CCC→TCC) ynfFS‑ and N‑oxide reductase, A subunit, periplasmic
Reads supporting (aligned to +/- strand):  ref base C (0/0);  major base T (43/38);  minor base G (0/1);  total (43/39)
Rejected as polymorphism: E-value score below prediction cutoff.
Rejected as polymorphism: Frequency below/above cutoff threshold.
Rejected as polymorphism: Variant not supported by required number of reads on each strand.

TGAACGCAAACCCATCTACTGGATGCTGAGTGAAGTCGCCAAACGCTTAGGACCAGACGTTTATCAAACCTTTACTGAAGGTCGCAGTCAGCATGAATGGATCAAATATCTCCATGCGAAAACGAAGGAACGTAACCCTGAGATGCCCGACTACGAGGAGATGAAAACGACCGGGATCTTTAAGAAAAAATGCCCGGAAGAACACTACGTCGCTTTCCGCGCATTCCGTGAAGATCCACAGGCAAACCCGTTGAAAACACCTTCGGGGAAAATCGAAATTTATTCTGAA  >  NC_000913/1662205‑1662493
                                                                                                                                                 |                                                                                                                                               
tGAACGCAAACCCATCTACTGGATGCTGAGTGAAGTCGCCAAACGCTTAGGACCAGACGTTTATCAAACCTTTACTGAAGGTCGCAGTCAGCATGAATGGATCAAATATCTCCATGCGAAAACGAAGGAACGTAACCCTGAGATGtcc                                                                                                                                               <  4:384313/148‑1 (MQ=255)
tGAACGCAAACCCATCTACTGGATGCTGAGTGAAGTCGCCAAACGCTTAGGACCAGACGTTTATCAAACCTTTACTGAAGGTCGCAGTCAGCATGAATGGATCAAATATCTCCATGCGAAAACGAAGGAACGTAACCCTGAGATGtcc                                                                                                                                               <  4:162381/148‑1 (MQ=255)
    cGCAAACCCATCTACTGGATGCTGAGTGAAGTCGCCAAACGCTTAGGACCAGACGTTTATCAAACCTTTACTGAAGGTCGCAGTCAGCATGAATGGATCAAATATCTCCATGCGAAAACGAAGGAACGTAACCCTGAGATGTCCGACTa                                                                                                                                          >  8:293185/1‑149 (MQ=255)
    cGCAAACCCATCTACTGGATGCTGAGTGAAGTCGCCAAACGCTTAGGACCAGACGTTTATCAAACCTTTACTGAAGGTCGCAGTCAGCATGAATGGATCAAATATCTCCATGCGAAAACGAAGGAACGTAACCCTGAGATGTCCGACTa                                                                                                                                          <  2:221491/149‑1 (MQ=255)
       aaaCCCATCTCCTGGATGCTGAGAGAAGTCGCCAAAAGCTTAGGACCAGACGTTTATCAAACCTTTACTGAAGGTCGCATTCAGCATGAATGGATCAAATATCTCCATTCGAAAACGAAGGAACGTAACCCTGAGATGTCCGACttc                                                                                                                                         >  5:112727/1‑145 (MQ=255)
        taCCCATCTACTGGATGCTGAGTGAAGTCGCCAAACGCTTAGGACCAGACGTTTATCAAACCTTTACTGAAGGTCGCAGTGAGCATGAATGGATCAAATATCTCCATGCGAAAAGGAAGGAAAGTAACCCTGAGATGTCCGACTACgag                                                                                                                                      <  5:326650/148‑1 (MQ=255)
          cccATCTACTGGATGCTGAGTGAAGTCGCCAAACGCTTAGGACCAGACGTTTATCAAACCTTTACTGAAGGTCGCAGTCAGCATGAATGGATCAAATATCTCCATGCGAAAACGAAGGAACGTAACCCTGAGATGTCCGACTACgagga                                                                                                                                    <  6:271607/149‑1 (MQ=255)
          cccATCTACTGGATGCTGAGTGAAGGCGCCAAACGCTGAGGACCAGACGTTTATCAAACCTTTACTGAAGGTCGCAGGCAGCATGAATGGATCAAATATCTCCATGCGAAAACGACGGAACGTAACCCTGAGATGGCCGACTACgagga                                                                                                                                    <  6:271609/149‑1 (MQ=255)
             aTCTACTGGATGCTGAGTGAAGTCGCCAAACGCTTAGGACCAGACGTTTATCAAACCTTTACTGAAGGTCGCAGTCAGCATGAATGGATCAAATATCTCCATGCGAAAACGAAGGAACGTAACCCTGAGATGTCCGACTACGAGGAGAt                                                                                                                                 <  8:258044/149‑1 (MQ=255)
             aTCTACTGGATGCTGAGTGAAGTCGCCAAACGCTTAGGACCAGACGTTTATCAAACCTTTACTGAAGGTCGCAGTCAGCATGAATGGATCAAATATCTCCATGCGAAAACGAAGGAACGTAACCCTGAGATGTCCGACTACGAGGAGAt                                                                                                                                 <  7:200315/149‑1 (MQ=255)
              tCTACTGGATGCTGAGTGAAGTCGCCAAACGCTTAGGACCAGACGTTTATCAAACCTTTACTGAAGGTCGCAGTCAGCATGAATGGATCAAATATCTCCATGCGAAAACGAAGGAACGTAACCCTGAGATGTCCGACTACGAGGAGAt                                                                                                                                 >  1:122462/1‑148 (MQ=255)
              tCTACTGGATGCTGAGTGAAGTCGCCAAACGCTTAGGACCAGACGTTTATCAAACCTTTACTGAAGGTCGCAGTCAGCATGAATGGATCAAATATCTCCATGCGAAAACGAAGGAACGTAACCCTGAGATGTCCGACTACGAGGAGAt                                                                                                                                 >  4:127827/1‑148 (MQ=255)
                   tGGATGCTGAGTGAAGTCGCCAAACGCTTAGGACCAGACGTTTATCAAACCTTTACTGAAGGTCGCAGTCAGCATGAATGGATCAAATATCTCCATGCGAAAACGAAGGAACGTAACCCTGAGATGTCCGACTAc                                                                                                                                         >  5:305287/1‑135 (MQ=255)
                   tGGATGCTGAGTGAAGTCGCCAAACGCTTAGGACCAGACGTTTATCAAACCTTTACTGAAGGTCGCAGTCAGCATGAATGGATCAAATATCTCCATGCGAAAACGAAGGAACGTAACCCTGAGATGTCCGACTAc                                                                                                                                         <  6:305287/135‑1 (MQ=255)
                      aTGCTGAGTGAAGTCGCCAAACGCTTAGGACCAGACGTTTATCAAACCTTTACTGAAGGTCGCAGTCAGCATGAATGGATCAAATATCTCCATGCGAAAACGAAGGAACGTAACCCTGAGATGTCCGACTACGAGGAGATGAAAACGAc                                                                                                                        <  8:121131/149‑1 (MQ=255)
                         cTGAGTGAAGTCGCCAAACGCTTAGGACCAGACGTTTATCAAACCTTTACTGAAGGTCGCAGTCAGCATGAATGGATCAAATATCTCCATGCGAAAACGAAGGAACGTAACCCTGAGATGTCCGACTACGAGGAGATGAAAACGACCgg                                                                                                                     <  5:103118/149‑1 (MQ=255)
                          tGAGTGAAGTCGCCAAACGCTTAGGACCAGACGTTTATCAAACCTTTACTGAAGGTCGCAGTCAGCATGAATGGATCAAATATCTCCATGCGAAAACGAAGGAACGTAACCCTGAGATGTCCGACTACGAGGAGATGAAAACGACCgg                                                                                                                     >  3:28070/1‑148 (MQ=255)
                          tGAGTGAAGTCGCCAAACGCTTAGGACCAGACGTTTATCAAACCTTTACTGAAGGTCGCAGTCAGCATGAATGGATCAAATATCTCCATGCGAAAACGAAGGAACGTAACCCTGAGATGTCCGACTACGAGGAGATGAAAACGACCgg                                                                                                                     >  8:116668/1‑148 (MQ=255)
                                  gTCGCCAAACGCTTAGGACCAGACGTTTATCAAACCTTTACTGAAGGTCGCAGTCAGCATGAATGGATCAAATATCTCCATGCGAAAACGAAGGAACGTAACCCTGAGATGTCCGACTACGAGGAGATGAAAACGACCGGGATCTTTaa                                                                                                            <  3:18920/149‑1 (MQ=255)
                                       cAAACGCTTAGGACCAGACGTTTATCAAACCTTTACTGAAGGTCGCAGTCAGCATGAATGGATCAAATATCTCTATGCGAAAACGAAGGAACGTAACCCTGAGATGTCCGACTACGAGGAGATGAAAACGACCGGGATCTTTAAGaaaa                                                                                                       <  1:167292/149‑1 (MQ=255)
                                       cAAACGCTTAGGACAAGACGTTTATCAAACCTTTACTGAAGGTCGCAGTCAGCATGAATGGATCAAATATCTCCATTCGAAAACGAAGGAACGTAACCCTGAGATGTCCTACTACTAGGAGATGAAAACGACCGTGATATTTAAGaaa                                                                                                        >  5:101270/1‑148 (MQ=255)
                                          acgagtAGGACCAGACGTTTATCAACCCGTTACTGAAGGTCGCCGTCAGCATGAATGGATAAAATATCTCCATTCGAAAACGTAGGAACGTTACCCTGTGATGTCGGACTACGAGGAGATGAATTCGACTTGGATCTTTAAGAAAAAAt                                                                                                    <  6:112727/144‑1 (MQ=255)
                                             cTTAGGACCAGACGTTTATCAAACCTTTACTGAAGGTCGCAGTCAGCATGAATGGATCAAATATCTCCATGCGAAAACGAAGGAACGTAACCCTGAGATGTCCGACTACGAGGAGATGAAAACGACCGGGATCTTTAAGAAAAAATGcc                                                                                                 >  6:136417/1‑149 (MQ=255)
                                              ttAGGACCAGACGTTTATCAAACCTTTACTGAAGGTCGCAGTAAGAATGAATGGATCAAATATGTCCATGCGAAAACGAAGGAACGTAACCCTGAGATGTCCGACTACGAGGAGATCAAAACGACCGGGATCTTTAAGAAAAAATGccc                                                                                                >  6:157535/1‑149 (MQ=255)
                                                aGGACCAGACGTTTATCAAACCTTTACTGAAGGTCGCAGTCAGCATTAATGGATCAAATATCTCCATGCGAAAACGAAGGAACGTAACCCTGAGATGTCCGACTACGAGGCGATGAAAACGACCGGGATCTTTAAGAAAAAATGccc                                                                                                <  6:320615/147‑1 (MQ=255)
                                                  gACCAGACGTTTATCAAACCTTTACTGAAGGTCGCAGTCAGCATGAATGGATCAAATATCTCCATGCGAAAACGAAGGAACGTAACCCTGAGATGTCCGACTACGAGGAGATGAAAACGACCGGGATCTTTAAGAAAAAATGCCCgg                                                                                              >  1:129423/1‑147 (MQ=255)
                                                  gACCAGACGTTTATCAAACCTTTACTGAAGGTCGCAGTCAGCATGAATGGATCAAATATCTCCATGCGAAAACGAAGGAACGTAACCCTGAGATGTCCGACTACGAGGAGATGAAAACGACCGGGATCTTTAAGAAAAAATGCCCGgaa                                                                                            <  4:28070/149‑1 (MQ=255)
                                                   tacataagTTTATCAAAACTTTACTGAAGGTCTAAGTCAGCATGAATGGATCAAATATATCCATGCTAAAACGAAGGAACGTAACCCTGAGATGTCCGACTAAGAGTAGATGAAAACGACAGGGATCTTTAAGAAAAAATGACCGgaag                                                                                           <  6:101270/142‑1 (MQ=255)
                                                   aCCAGACGTTTATCAAACCTTTACTGAAGGTCGCAGTCAGCATGAATGGATCAAATATCTCCATGCGAAAACGAAGGAACGTAACCCTGAGATGTCCGACTACGAGGAGATGAAAACGACCGGGATCTTTAAGAAAAAATGCCCGgaag                                                                                           <  5:220498/149‑1 (MQ=255)
                                                     cAGACGTTTATCAAACCTTTACTGAAGGTCGCAGTCAGCATGAATGGATCAAATATCTCCATGCGAAAACGAAGGAACGTAACCCTGAGATGTCCGACTACGAGGAGATGAAAACGACCGGGATCTTTa                                                                                                             >  4:88531/1‑129 (MQ=255)
                                                     cAGACGTTTATCAAACCTTTACTGAAGGTCGCAGTCAGCATGAATGGATCAAATATCTCCATGCGAAAACGAAGGAACGTAACCCTGAGATGTCCGACTACGAGGAGATGAAAACGACCGGGATCTTTa                                                                                                             <  3:88531/129‑1 (MQ=255)
                                                     cAGACGTTTATCAAACCTTTACTGAAGGTCGCAGTCAGCATGAATGGATCAAATATCTCCATGCGAAAACGAAGGAACGTAACCCTGAGATGTCCGACTACGAGGAGATGAAAACGACCGGGATCTTTAAGAAAAAATGCCCGgaagaa                                                                                         >  8:209433/1‑149 (MQ=255)
                                                        aCGTTTATCAAACCTTTACTGAAGGTCGCAGTCAGCATGAATGGATCAAATATCTCCATGCGAAAACGAAGGAACGTAACCCTGAGATGTCCGACTACGAGGAGATGAAAACGACCGGGATCTTTAAGAAAAAATGCCCGGAAGAacac                                                                                      >  5:208812/1‑149 (MQ=255)
                                                          gTTTATCAAACCTTTACTGAAGGTCGCAGTCAGCATGAATGGATCAAATATCTCCATGCGAAAACGAAGGAACGTAACCCTGAGATGTCCGACTACGAGGAGATGAAAACGACCGGGATCTTTAAGAAAAAATGCCCGGAAGATCACTa                                                                                    >  3:32431/1‑149 (MQ=255)
                                                          gTTTATCAAACCTTTACTGAAGGTCGCAGTCAGCATGAATGGATCAAATATCTCCATGCGAAAACGAAGGAACGTAACCCTGAGATGTCCGACTACGAGGAGATGAAAACGACCGGGATCTTTAAGAAAAAATGCCCGGAAGAACACTa                                                                                    <  3:127827/149‑1 (MQ=255)
                                                                  aaCCTTTACTGAAGGTCGCAGTCAGCATGAATGGATCAAATATCTCCATGCGAAAACGAAGGAACGTAACCCTGAGATGTCCGACTACGAGGAGATGAAAACGACCGGGATCTTTAAGAAAAAATGCCCGGAAGAACACTACGTCGCtt                                                                            >  8:27014/1‑149 (MQ=255)
                                                                     cTTTACTGAAGGTCGCAGTCAGCATGAATGGATCAAATATCTCCAGGCGAAAACGAAGGAACGTAACCCTGAGATGTCCGACTACGCGGAGATGAAAACGACCGGGATCTTTAAGAAAAAATGCCCGGAAGCACACTACGTCGCTTTcc                                                                         >  5:331024/1‑149 (MQ=255)
                                                                        tACTGAAGGTCGCAGTCAGCATGAATGGATCAAATATCTCCATGCGAAAACGAAGGAACGTAACCCTGAGATGTCCGACTACGAGGAGATGAAAACGACCGGGATCTTTAAGAAAAAATGCCCGGAAGAACACTACGTCGCTTTCcgc                                                                       <  7:293185/148‑1 (MQ=255)
                                                                           tGAAGGTCGCAGTCAGCATGAATGGATCAAATATCTCCATGCGAAAACGAAGGAACGTAACCCTGAGATGTCCGACTACGAGGAGATGAAAACGACCGGGATCTTTAAGAAAAAATGCCCGGAAGAACACTACGTCGCTTTCCGCGCa                                                                    >  3:24258/1‑148 (MQ=255)
                                                                                 tCGCAGTCAGCATGAATGGATCAAATATCTCCATGCGAAAACGAAGGAACGTAACCCTGAGATGTCCGACTACGAGGAGATGAAAACGACCGGGATCTTTAAGAAAAAATGCCCGGAAGAACACTACGTCGCTTTCCGCGCATTCCGTg                                                             <  3:50581/149‑1 (MQ=255)
                                                                                   gCAGTCAGCATGAATGGATCAAATATCTCCATGCGAAAACGAAGGAACGTAACCCTGAGATGTCCGACTACGAGGAGATGAAAACGACCGGGATCTTTAAGAAAAAATGCCCGGAAGAACACTACGTCGCTTTCCGCGCATTCCGTg                                                             >  3:380226/1‑147 (MQ=255)
                                                                                   gCAGTCAGCATGAATGGATCAAATATCTCCATGCGAAAACGAAGGAACGTAACCCTGAGATGTCCGACTACGAGGAGATGAAAACGACCGGGATCTTTAAGAAAAAATGCCCGGAAGAACACTACGTCGCTTTCCGCGCATTCCGTg                                                             >  7:46594/1‑147 (MQ=255)
                                                                                   gCAGTCAGCATGAATGGATCAAATATCTCCATGCGAAAACGAAGGAACGTAACCCTGAGATGTCCGACTACGAGGAGATGAAAACGACCGGGATCTTTAAGAAAAAATGCCCGGAAGAACACTACGTCGCTTTCCGCGCATTCCGTg                                                             >  5:295846/1‑147 (MQ=255)
                                                                                   gCAGTCAGCATGAATGGATCAAATATCTCCATGCGAAAACGAAGGAACGTAACCCTGAGATGTCCGACTACGAGGAGATGAAAACGACCGGGATCTTTAAGAAAAAATGCCCGGAAGAACACTACGTCGCTTTCCGCGCATTCCGTGa                                                            <  1:107529/148‑1 (MQ=255)
                                                                                   gCAGTCAGCATGAATGGATCAAATATCTCCATGCGAAAACGAAGGAACGTAACCCTGAGATGTCCGACTACGAGGAGATGAAAACGACCGGGATCTTTAAGAAAAAATGCCCGGAAGAACACTACGTCGCTTTCCGCGCATTCCGTGa                                                            <  1:54255/148‑1 (MQ=255)
                                                                                    cAGTCAGCATGAATGGATCAAATATCTCCATGCGAAAACGAAGGAACGTAACCCTGAGATGTCCGACTACGAGGAGATGAAAACGACCGGGATCTTTAAGAAAAAATGCCCGGAAGAACACTACGTCGCTTTCCGCGCATTCCGTg                                                             >  6:175166/1‑146 (MQ=255)
                                                                                     aGTCAGCATGAATGGATCAAATATCTCCATGCGAAAACGAAGGAACGTAACCCTGAGATGTCCGACTACGAGGAGATGAAAACGACCGGGATCTTTAAGAAAAAATGCCCGGAAGAACACTACGTCGCTTTCCGCGCATTCCGTGAAGa                                                         <  7:27014/149‑1 (MQ=255)
                                                                                      gTCAGCATGAATGGATCAAATATCTCCATGCGAAAACGAAGGAACGTCACCCTGAGATGTCCGACTACGAGGAGATGAAAACGACCGGGATCGTTAAGAAAAAATGCCGGGAAGCACACTACGTCGCGTTCCGCGCATTCCGTg                                                             >  8:318561/1‑144 (MQ=255)
                                                                                       tCAGCATGAATGGATCAAATATCTCCATGCGAAAACGAAGGAACGTAACCCTGAGATGTCCTACTACGAGGAGATGAAAACGACCGGGATCTTTAAGAAAAAATGCCCGTAAGAAAACTACGTCGCTTTCCGCGCATTCCGGGAAGATc                                                       >  6:394158/1‑149 (MQ=255)
                                                                                       tCAGCATGAATGGATCAAATATCTCCATGCGAAAACGAAGGAACGTAACCCTGAGATGTCCGACTACGAGGAGATGAAAACGACCGGGATCTTTAAGAAAAAATGCCCGGAAGAACACTACGTCGCTTTCCGCGCATTCCGTGAAGATc                                                       >  7:47334/1‑149 (MQ=255)
                                                                                       tCAGCATGAATGGATCAAATATCTCCATGCGAAAACGAAGGAACGTAACCCTGAGATGTCCGACTACGAGGAGATGAAAACGACCGGGATCTTTAAGAAAAAATGCCCGGAAGAACACTACGTCGCTTTCCGCGCATTCCGTGAAGATc                                                       >  8:292556/1‑149 (MQ=255)
                                                                                            aTGAATGGATCAAATATCTCCATGCGAAAACGAAGGAACGTAACCCTGAGATGTCCGa                                                                                                                                             <  6:239574/58‑1 (MQ=255)
                                                                                            aTGAATGGATCAAATATCTCCATGCGAAAACGAAGGAACGTAACCCTGAGATGTCCGa                                                                                                                                             >  5:239574/1‑58 (MQ=255)
                                                                                             tGAATGGATCAAATATCTCCATGCGAAAACGAAGGAACGTAACCCTGAGATGTCCGACTACGAGGAGATGAAAACGACCGGGATCTTTAAGAAAAAATGCCCGGAAGAACACTACGTCGCTTTCCGCGCATTCCGTGAAGATCCACAgg                                                 >  1:234611/1‑149 (MQ=255)
                                                                                              gAATGGATCAAATATCTCCATGCGAAAACGAAGGAACGTAACCCTGAGATGTCCGACTACGAGGAGATGAAAACGACCGGGATCTTTa                                                                                                             >  6:235331/1‑88 (MQ=255)
                                                                                              gAATGGATCAAATATCTCCATGCGAAAACGAAGGAACGTAACCCTGAGATGTCCGACTACGAGGAGATGAAAACGACCGGGATCTTTa                                                                                                             <  5:235331/88‑1 (MQ=255)
                                                                                              gAATGGATCAAATATCTCCATGCGAAAACGAAGGAACGTAACCCTGAGATGTCCGACTACGAGGAGATGAAAACGACCGGGATCTTTAAGAAAAAATGCCCGGAAGAACACTACGTCGCTTTCCGCGCATTCCGTGAAGATCCACAgg                                                 >  7:392467/1‑148 (MQ=255)
                                                                                                   gATCAAATATCTCCATGCGAAAACGAAGGAACGTAACCCTGAGATGTCCGACTACGAGGAGATGAAAACGACCGGGATCTTTAAGAAAAAATGCCCGGAAGAACACTACGTCGCTTTCCGCGCATTCCGTGAAGATCCACAGGCAAAc                                            <  7:209433/148‑1 (MQ=255)
                                                                                                     tCAAATATCTCCATGCGAAAACGAAGGAACGTAACCCTGAGATGTCCGACTACGAGGAGATGAAAACGACCGGGATCTTTAAGAAAAAATGCCCGGAAGAACACTACGTCGCTTTCCGCGCATTCCGTGAAGATCCACAGGCAAACCCg                                         >  5:105641/1‑149 (MQ=255)
                                                                                                       aaaTATCTCCATGCGAAAACGAAGGAACGTAACCCTGAGATGTCCGACTACGAGGAGATGAAAACGACCGGGATCTTTAAGAAAAACTGCCCGGAAGAACACTACGTCGCTTTCCGCGCATTCCGTGAAGATCCACAGGCAAACCCGt                                        <  1:326736/148‑1 (MQ=255)
                                                                                                       aaaTATCTCCATGCGAAAACGAAGGAACGTAACCCTGAGATGTCCGACTACGAGGAGATGAAAACGACCGGGATCTTTAAGAAAAAATGCCCGGAAGATCACTACGTCGCTTTCCGCGCATTCCGTGAAGATCCACAGGCAAACCCGtt                                       <  4:32431/149‑1 (MQ=255)
                                                                                                         atatCTCCATGCGAAAACGAAGGAACGTAACCCTGAGATGTCCGACTACGAGGAGATGAAAACGACCGGGATCTTTAAGAAAAAATGCCCGGAAGAACACTACGTCGCTTTCCGCGCATTCCGTGAAGATCCACAGGCAAACCCGTTg                                      >  4:6749/1‑148 (MQ=255)
                                                                                                          tatCTCCATGCCAAAACGAAGGAACGTAACCCTCAGATGTCAGACTACGAGGAGATGAAAACGACCGGGATCTTTAAGAAAAAATGCCCGGAAGAAAACTACGTCGCTTTCCGCGCATTCCGTTAAGATCCACAGGCAAACCCGTTGa                                     >  6:78305/1‑148 (MQ=255)
                                                                                                            tctcCATGCGAAAACGAAGGAACGTAACCCTGAGATGTCCGACTACGAGGAGATGAAAACGACCGGGATCTTTAAGAAAAAATGCCCGGAAGAACACTACGTCGCTTTCCGCGCATTCCGTGAATATCCACAGGCAAACCCGTTGaaa                                   <  2:122462/148‑1 (MQ=255)
                                                                                                            tctcCATGCGAAAACGAAGGAACGTAACCCTGAGATGTCCGACTACGAGGAGATGAAAACGACCGGGATCTTTAAGAAAAAATGCCCGGAAGAACACTACGTCGCTTTCCGCGCATTCCGTGAAGATCCACAGGCAAACCCGTTGaaa                                   >  1:420150/1‑148 (MQ=255)
                                                                                                            tctcCATGCGAAAACGAAGGAACGTAACCCTGAGATGTCCGACTACGAGGAGATGAAAACGACCGGGATCTTTAAGAAAAAATGCCCGGAAGAACACTACGTCGCTTTCCGCGCATTCCGTGAAGATCCACAGGCAAACCCGTTGaaa                                   <  6:208812/148‑1 (MQ=255)
                                                                                                              tcCATGCGAAAACGAAGGAACGTAACCCTGAGATGTCCGACTACGAGGAGATGAAAACGACCGGGATCTTTAAGAAAAAATGCCCGGAAGAaca                                                                                       >  4:41939/1‑94 (MQ=255)
                                                                                                              tcCATGCGAAAACGAAGGAACGTAACCCTGAGATGTCCGACTACGAGGAGATGAAAACGACCGGGATCTTTAAGAAAAAATGCCCGGAAGAaca                                                                                       <  3:41939/94‑1 (MQ=255)
                                                                                                               ccATGCGAAAACGAAGGAACGTAACCCTGAGATGTCCGACTACGAGGAGATGAAAACGACCGGGATCTTTAAGAAAAAATGCCCGGAAGAACACTACGTCGCTTTCCGCGCATTCCGTGAAGATCCACAGGCAAACCCGTTGAAAacac                               >  6:193241/1‑149 (MQ=255)
                                                                                                                cATGCGAAAACGAAGGAACGTAACCCTGAGATGTCCGACTACGAGGAGATGAAAACGACCGGGATCTTTAAGAAAAAATGCCCGGAAGAACACTACGTCGCTTTCCGCGCATTCCGTGAAGATCCACAGGCAAACCCGTTGaaaa                                  <  8:47334/145‑1 (MQ=255)
                                                                                                                 aTGCGAAAACGAAGGAACGTAACCCTGAGATGTCCGACTACGAGGAGATGAAAACGACCGGGATCTTTAAGAAAAAATGCCCGGAAGAACACTACGTCGCTTTCCGCGCATTCCGTGAAGATCCACAGGCAAACCCGTTGAAAACACCt                             <  6:295846/149‑1 (MQ=255)
                                                                                                                 aTGCGAAAACGAAGGAACGTAACCCTGAGATGTCCGACTACGAGGAGATGAAAACGACCGGGATCTTTAAGAAAAAATGCCCGGAAGAACACTACGTCGCTTTCCGCGCATTCCGTGAAGATCCACAGGCAAACCCGTTGAAAACACCt                             <  4:380226/149‑1 (MQ=255)
                                                                                                                    cGAAAACGAAGGAACGTAACCCTGAGATGTCCGACTACGAGGAGATGAAAACGACCGGGATCTTTAAGAAAAAATGCCCGGAAGAACACTACGTCGCTTTCCGCGCATTCCGTGAAGATCCACAGGCAAACCCGTTGAAAACACCTTCg                          >  1:316673/1‑149 (MQ=255)
                                                                                                                     gAAAACGAAGGAACGTAACCCTGAGATGTCCGACTACGAGGAGATGAAAACGACCGGGATCTTTAAGAAAAAATTCACGGAAGAACACTACGTCGCATTACGCGCATTCCGTGAAGAACCACAGGCAAACCCCTTGAAAACACCTTCgg                         >  6:121620/1‑149 (MQ=255)
                                                                                                                      aaaaCGAAGGAACGTAACCCTGAGATGTCCGACTACGAGGAGATGAAAACGACGGGGATCTTTAAGAAAAAATGCCCGGAAGAACACTACGTCGCTTTCCGCGCATTCCGTGAAGATCCACAGGCAAACCCGTTGAAAACACCTTCggg                        <  5:121620/149‑1 (MQ=255)
                                                                                                                       aaaCTAAGGAACGCAACCCTGCGATGTCCGACTACGTGGAGATTAAAACGACCGGGATCTTTAAGAAAAAATGCCCGGAAGAACACTACGTCGCTTTCCGAGCATTCCGTGAAGATCCACAGTCAAACCCGTTGAAAACACCTTCgg                         <  6:27973/147‑1 (MQ=255)
                                                                                                                        aaCGAAGGAACGTAACCCTGAGATGTCCGACTACGAGGAGATGAAAACGACCGGGATCTTTAAGAAAAAATGCCCGGAAGAACACTACGTCGCTTTCCGCGCATTCCGTGAAGATCCACAGGCAAACCCGTTGAAAACACCTTCgggg                       >  3:349775/1‑148 (MQ=255)
                                                                                                                             aGGAACGTAACCCTGAGATGTCCGACTACGAGGAGATGAAAACGACCGGGATCTTTAAGAAAAATGCCCGGAAGAACACTACGTCGCTTTCCGCGCATTCCGTGAAGATCCACAGGCAAACCCGTTGAAAACACCTTCGGGGAAAATc                 >  8:172333/1‑148 (MQ=255)
                                                                                                                                aaCGTAACCCTGAGATGTCCGACTACGAGGAGATGAAAACGACCGGGATCTTTAAGAAAAAATGCCCGGAAGAACACTACGTCGCTTTCCGCGCATTCCGTGAAGATCCACAGGCAAACCCGTTGAAAACACCTTCGGGGAAAATCGaa              <  7:116668/149‑1 (MQ=255)
                                                                                                                                  cGTAACGCTGAGATGTCCGACTACGAGGAGATGAAAACGACCGGGATCTTTAAGAAAAAATGCCCGGAAGAACACTACGTCGCTTTCCGCGCATTCCGTGAAGATCCACAGGCAAACCCGTTGAAACCACCTTCTGGGAAAATCGaatt            >  6:276981/1‑147 (MQ=255)
                                                                                                                                   gTAACCCTGAGATGTCCGACTACGAGGAGATGAAAACGACCGGGATCTTTAAGAAAAAATGCCCGGAAGAACACTACGTCGCTTTCCGCGCATTCCGTGAAGATCCACAGGCAAACCCGTTGAAAACACCTTCGGGGAAAATCGAAAtt           >  7:376086/1‑149 (MQ=255)
                                                                                                                                            agaTGTCCGACTACGAGGAGATGAAAACGACCGGGATCTTTAAGAAAAAATGCCCGGAAGAACACTACGTCGCTTTCCGCGCATTCCGTGAAGATCCACAGGCAAACCCGTTGAAAACACCTTCGGGGAAAATCGa               >  3:247354/1‑136 (MQ=255)
                                                                                                                                            agaTGTCCGACTACGAGGAGATGAAAACGACCGGGATCTTTAAGAAAAAATGCCCGGAAGAACACTACGTCGCTTTCCGCGCATTCCGTGAAGATCCACAGGCAAACCCGTTGAAAACACCTTCGGGGAAAATCGa               <  4:247354/136‑1 (MQ=255)
                                                                                                                                            agaTGTCCGACTACGAGGAGATGAAAACGACCGGGATCTTTAAGAAAAAATGCCCGGAAGAACACTACGTCGCTTTCCGCGCATTCCGTGAAGATCCACAGGCAAACCCGTTGAAAACACCTTCGGGGAAAATCGAAATTTATTCTGaa  <  8:392467/149‑1 (MQ=255)
                                                                                                                                                 |                                                                                                                                               
TGAACGCAAACCCATCTACTGGATGCTGAGTGAAGTCGCCAAACGCTTAGGACCAGACGTTTATCAAACCTTTACTGAAGGTCGCAGTCAGCATGAATGGATCAAATATCTCCATGCGAAAACGAAGGAACGTAACCCTGAGATGCCCGACTACGAGGAGATGAAAACGACCGGGATCTTTAAGAAAAAATGCCCGGAAGAACACTACGTCGCTTTCCGCGCATTCCGTGAAGATCCACAGGCAAACCCGTTGAAAACACCTTCGGGGAAAATCGAAATTTATTCTGAA  >  NC_000913/1662205‑1662493

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: