New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 100960231 (0.810)6 (0.170) 6/250 3.8 16.1% coding (1759/2109 nt) rlmL 23S rRNA m(2)G2445 and m(7)G2069 methyltransferases, SAM‑dependent
?NC_000913 = 1009624 33 (0.910)coding (1781/2109 nt) rlmL 23S rRNA m(2)G2445 and m(7)G2069 methyltransferases, SAM‑dependent
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

TTCTCTTATACCGGCAGCGCCACCGTGCATGCGGGATTAGGCGGTGCACGCAGCACCACCACCGTGGATATGTCGCGTACTTATCTGGAATGGGCAGAACGCAACCTGCGTCTGAATGGCCTGACCGGGCGTGCGCATCGCCTGATTCAGGCCGATTGCCTGGCGTGGCTGCGTGAGGCAAATGAACAGTTCGATCTGATCTTTATCGATCCGCCAACCTTCTCTAACTCAAAACGAATGGAAGATGCGTTTGATGTTCAGCGCGATCATCTGGCGCTGATG  >  NC_000913/1009479‑1009760
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ttCTCTTATACCGGCAGCGCCACCGTGCATGCGGGATTAGGCGGTGCACGCAGCACCACCACCGTGGATATGTCGCGTACTTATCTGGAATGGGCAGAACGCAACCTGCGTCTGAATGGCCTGACCGGGCGTGCGCATCGCCTGATTc                                                                                                                                        <  8:115139/148‑1 (MQ=255)
   tctTATACCGGCAGCGCCACCGTGCATGCGGGATTAGGCGGTGCACGCAGCACCACCACCGTGGATATGTCGCGTACTTATCTGGAATGGGCAGAACGCAACCTGCGTCTGAATGGCCTGACCGGGCGTGCGCATCGCCTGATTCAGGc                                                                                                                                    >  1:16105/1‑149 (MQ=255)
             gCAGCGCCACCGTGCATGCGGGATTAGGCGGTGCACGCAGCACCACCACCGTGGATATGTCGCGTACTTATCTGGAATGGGCAGAACGCAACCTGCGTCTGAATGGCCTGACCGGGCGTGCGCATCGCCTGATTCAGGCCGATTGCCTg                                                                                                                          <  5:106331/149‑1 (MQ=255)
                  gcCACCGTGCATGCGGGATTAGGCGGTGCACGCAGCACCACCACCGTGGATATGTCGCGTACTTATCTGGAATGGGCAGAACGCAACCTGCGTCTGAATGGCCTGACCGGGCGTGCGCATCGCCTGATTCAGGCCGATTGCCTGGCGTg                                                                                                                     >  2:83271/1‑149 (MQ=255)
                    cACCGTGCATGCGGGATTAGGCGGTGCACGCAGCACCACCACCGTGGATATGTCGCGTACTTATCTGGAATGGGCAGAACGCAACCTGCGTCTGAATGGCCTGACCGGGCGTGCGCATCGCCTGATTCAGGCCGATTGCCTGGCGTGGc                                                                                                                   >  7:7717/1‑149 (MQ=255)
                     aCCGTGCATGCGGGATTAGGCGGTGCACGCAGCACCACCACCGTGGATATGTCGCGTACTTATCTGGAATGGGCACAACGCAACCTGCGTCTGAATGGCCTGACCGGGCGTGCGCATCGCCTGATTCAGGCCGATTGCCTGGCGTGGCt                                                                                                                  >  1:43747/1‑149 (MQ=255)
                                gggATTAGGCGGTGCACGCAGCACCACCACCGTGGATATGTCGCGTACTTATCTGGAATGGGCAGAACGCAACCTGCGTCTGAATGGCCTGACCGGGCGTGCGCATCGCCTGATTCAGGCCGATTGCCTGGCGTGGCTGCGTGAGGCa                                                                                                        >  1:64899/1‑148 (MQ=255)
                                          ggTGCACGCAGCACCACCACCGTGGATATGTCGCGTACTTATCTGGAATGGGCAGAACGCAACCTGCGTCTGAATGGCCTGACCGGGCGTGCGCATCGCCTGATTCAGGCCGATTGCCTGGCGTGGCTGCGTGAGGCAAATGAACAGtt                                                                                             <  2:43747/149‑1 (MQ=255)
                                           gTGCACGCAGCACCACCACCGTGGATATGTCGCGTACTTATCTGGAATGGGCAGAACGCAACCTGCGTCTGAATGGCCTGACCGGGCGTGCGCATCGCCTGATTCAGGCCGATTGCCTGGCGTGGCTGCGTGAGGCAAATGAACAGTTc                                                                                            <  6:170412/149‑1 (MQ=255)
                                            tGCACGCAGCACCACCACCGTGGATATGTCGCGTACTTATCTGGAATGGGCAGAACGCAACCTGCGTCTGAATGGCCTGACCGGGCGTGCGCATCGCCTGATTCAGGCCGATTGCCTGGCGTGGCTGCGt                                                                                                              <  6:87972/130‑1 (MQ=255)
                                            tGCACGCAGCACCACCACCGTGGATATGTCGCGTACTTATCTGGAATGGGCAGAACGCAACCTGCGTCTGAATGGCCTGACCGGGCGTGCGCATCGCCTGATTCAGGCCGATTGCCTGGCGTGGCTGCGt                                                                                                              >  5:87972/1‑130 (MQ=255)
                                                        caccaccGTGGATATGTCGCGTACTTATCTGGAATGGGCAGAACGCAACCTGCGTCTGAATGGCCTGACCGGGCGTGCGCATCGCCTGATTCAGGCCGATTGCCTGGCGTGGCTGCGTGAGGCAAATGAACAGTTCGATCTGATCTTTa                                                                               <  1:83271/149‑1 (MQ=255)
                                                                          gcgTACTTATCTGGAATGGGCAGAACGCAACCTGCGTCTGAATGGCCTGACCGGGCGTGCGCATCGCCTGATTCAGGCCGATTGCCTGGCGTGGCTGCGTGAGGCAAATGaa                                                                                                  >  3:106371/1‑112 (MQ=255)
                                                                          gcgTACTTATCTGGAATGGGCAGAACGCAACCTGCGTCTGAATGGCCTGACCGGGCGTGCGCATCGCCTGATTCAGGCCGATTGCCTGGCGTGGCTGCGTGAGGCAAATGaa                                                                                                  <  4:106371/112‑1 (MQ=255)
                                                                              aCTTATCTGGAATGGGCAGAACGCAACCTGCGTCTGAATGGCCTGACCGGGCGTGCGCATCGCCTGATTCAGGCCGATTGCCTGGCGTGGCTGCGTGAGGCAAATGAACAGTTCGATCTGATCTTTATCGATCCGCCAACCTTCTCTaa                                                         >  5:56902/1‑149 (MQ=255)
                                                                                ttATCTGGAATGGGCAGAACGCAACCTGCGTCTGAATGGCCTGACCGGGCGTGCGCATCGCCTGATTCAGGCCGATTGCCTGGCGTGGCTGCGTGAGGCAAATGAACAGTTCGATCTGATCTTTATCGATCCGCCAAc                                                                  >  6:28062/1‑138 (MQ=255)
                                                                                ttATCTGGAATGGGCAGAACGCAACCTGCGTCTGAATGGCCTGACCGGGCGTGCGCATCGCCTGATTCAGGCCGATTGCCTGGCGTGGCTGCGTGAGGCAAATGAACAGTTCGATCTGATCTTTATCGATCCGCCAAc                                                                  <  5:28062/138‑1 (MQ=255)
                                                                                  aTCTGGAATGGGCAGAACGCAACCTGCGTCTGAATGGCCTGACCGGGCGTGCGCATCGCCTGATTCAGGCCGATTGCCTGGCGTGGCTGCGTGAGGCAAATGAACAGTTCGATCTGATCTTTATCGATCCGCCAACCTTCTCTAACt                                                       <  6:56902/147‑1 (MQ=255)
                                                                                               aGAACGCAACCTGCGTCTGAATGGCCTGACCGGGCGTGCGCATCGCCTGATTCAGGCCGATTGCCTGGCGTGGCTGCGTGAGGCAAATGAACAGTTCGATCTGATCTTTATCGATCCGCCAACCTTCTCTAACTCAAAACGAATg                                            <  7:57822/145‑1 (MQ=255)
                                                                                               aGAACGCAACCTGCGTCTGAATGGCCTGACCGGGCGTGCGCATCGCCTGATTCAGGCCGATTGCCTGGCGTGGCTGCGTGAGGCAAATGAACAGTTCGATCTGATCTTTATCGATCCGCCAACCTTCTCTAACTCAAAACGAATg                                            >  8:57822/1‑145 (MQ=255)
                                                                                                 aaCGCAACCTGCGTCTTAATGGCCAGACCGGGCGTGCGCATCGCCTGATTCAGGCCGATTGCCTGGCGTGGCTGCGTGAGGCAAATGAACAGTTCGATCTGATCTATATCGATCCGCCAACCTTCTCTAAATAAAAACGAATAAAAGAt                                      >  8:59990/1‑149 (MQ=255)
                                                                                                      aaCCTGCGTCTGAATGGCCTGACCGGGCGTGCGCATCGCCTGATTCAGGCCGATTGCCTGGCGTGGCTGCGTGAGGCAAATGAACAGTTCGATCTGATCTTTATCGATCCGCCAAc                                                                  >  4:18328/1‑116 (MQ=255)
                                                                                                      aaCCTGCGTCTGAATGGCCTGACCGGGCGTGCGCATCGCCTGATTCAGGCCGATTGCCTGGCGTGGCTGCGTGAGGCAAATGAACAGTTCGATCTGATCTTTATCGATCCGCCAAc                                                                  <  3:18328/116‑1 (MQ=255)
                                                                                                         cTGCGTCTGAATGGCCTGACCGGGCGTGCGCATCGCCTGATTCAGGCCGATTGCCTGGCGTGGCTGCGTGAGGCAAATGAACAGTTCGATCTGATCTTTATCGATCCGCCAACCTTCTCTAACTCAAAACGAATGGAAGATGCGTTTGa                              <  2:64899/149‑1 (MQ=255)
                                                                                                                  aaTGGCCTGACCGGGCGTGCGCATCGCCTGATTCAGGCCGATTGCCTGGCGTGGCTGCGTGAGGCAAATGAACAGTTCgat                                                                                         >  2:7562/1‑81 (MQ=255)
                                                                                                                  aaTGGCCTGACCGGGCGTGCGCATCGCCTGATTCAGGCCGATTGCCTGGCGTGGCTGCGTGAGGCAAATGAACAGTTCgat                                                                                         <  1:7562/81‑1 (MQ=255)
                                                                                                                         ggACCGGGCGGGCGCATCGCCGGATGCTGCCGGATTGCCGGGCGGGGCTGCGGTCGGCAAAGTAATCGTCCCACCTCACCTTTACCCAT‑CGCCAACCTTCTCTAACTCAAAACGAATGGAAGATGCGTTTGATGTTCAGCGCGatcatc             <  8:7717/148‑1 (MQ=255)
                                                                                                                           aCCGGGCGTGCGCATCGCCTGATTCAGGCCGATTGCCTGGCGTGGCTGCGTGAGGCAAATGAACAGTTCGATCTGATCTTTATCGATCCGCCAACCTTCTCTAACTCAAAACGAATGGAAGATGCGTTTGATGTTCAGCGCGatcatc             <  7:59990/148‑1 (MQ=255)
                                                                                                                             cGGGCGTGCGCATCGCCTGATTCAGGCCGATTGACTGGCGGGGCTGCGTGAGGCAAATGAACAGTTCGATCTGATCTTTATCGATCCGCCAACCTTCTCTAACTCAAAACGAATGGAAGATGCGTTTGATGTTCAGCGCGATCATCTgg          <  3:95671/149‑1 (MQ=255)
                                                                                                                              gggCGTGCGCATCGCCTGATTCAGGCCGATTGCCTGGCGTGGCTGCGTGAGGCAAATGAACAGTTCGATCTGATCTTTATCGATCCGCCAACCTTCTCTAACTCAAAACGAATGGAAGATGCGTTTGATGTTCAGCGCGATCATCTGgc         <  2:16105/149‑1 (MQ=255)
                                                                                                                                gCGTGCGCATCGCCTGATTCAGGCCGATTGCCTGTCGTGGCTGCGTGAGGCAAATGAACAGTTCGATCTCAACTTTATCGATCCGCCAACCATCTCTAACTCAAAACTAATGGAAGATGCGATTGATGTTCAGCGCGATCATCTGgcgc       >  1:29651/1‑149 (MQ=255)
                                                                                                                                      gcATCGCCTGATTCAGGCCGATTGCCTGGCGTGGCTGCGTGAGGCAAATGAACAGTTCGATCTGATCTTTATCGATCCGCCAACCTTCTCTAACTCAAAACGAATGGAAGATGCGTTTGATGTTCAGCGCGATCATCTGGCGCtgatg  >  3:132578/1‑148 (MQ=255)
                                                                                                                                      gcATCGCCTGATTCAGGCCGATTGCCTGGCGTGGCTGCGTGAGGCAAATGAACAGTTCGATCTGATCTTTATCGATCCGCCAACCTTCTCTAACTCAAAACGAATGGAAGATGCGTTTGATGTTCAGCGCGATCATCTGGCGCtgatg  >  1:52454/1‑148 (MQ=255)
                                                                                                                                            ccTGATTCAGGCCGATTGCCTGGCGTGGCTGCGTGAAGCAAATGAACAGTTCGATCTGATCTTTATCGATCCGCCAACCTTCTCTAACTCAAAACGAATGGAAGATGCGTTTGATGTTCAGCGCGATCATCTGGCGCtgat   >  4:79869/1‑141 (MQ=255)
                                                                                                                                            ccTGATTCAGGCCGATTGCCTGGCGTGGCTGCGTGAAGCAAATGAACAGTTCGATCTGATCTTTATCGATCCGCCAACCTTCTCTAACTCAAAACGAATGGAAGATGCGTTTGATGTTCAGCGCGATCATCTGGCGCtgat   <  3:79869/141‑1 (MQ=255)
                                                                                                                                                 |                                                                                                                                        
TTCTCTTATACCGGCAGCGCCACCGTGCATGCGGGATTAGGCGGTGCACGCAGCACCACCACCGTGGATATGTCGCGTACTTATCTGGAATGGGCAGAACGCAACCTGCGTCTGAATGGCCTGACCGGGCGTGCGCATCGCCTGATTCAGGCCGATTGCCTGGCGTGGCTGCGTGAGGCAAATGAACAGTTCGATCTGATCTTTATCGATCCGCCAACCTTCTCTAACTCAAAACGAATGGAAGATGCGTTTGATGTTCAGCGCGATCATCTGGCGCTGATG  >  NC_000913/1009479‑1009760

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.