New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 417982851 (1.340)6 (0.160) 5/252 4.3 11.7% intergenic (+245/‑168) rplA/rplJ 50S ribosomal subunit protein L1/50S ribosomal subunit protein L10
?NC_000913 = 4179850 42 (1.150)intergenic (+267/‑146) rplA/rplJ 50S ribosomal subunit protein L1/50S ribosomal subunit protein L10
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

ATAGCTAACTATGTGACTGGTGCGAATGAAGGAAGCCAACGCCGTCACAAGCTGAATAGCGACGGATAGAAAAGATTTGTTCGTTGGAGCCTGGCCTATCCAGGCCTCCGTCGAAGACCGCAGGAGTTTCGCAAGAAACTTAATCCCCTGCGTAGACGGTGACAGAACGCTAAGATTATTCTTTTATATTCTGGCTTGTTTCTGCTCACCGTAATTAAGACGCTCTCTCCGTTTGGAGGAGTGAAGTGAGTTCCAGAGATTTTCTCTGG  >  NC_000913/4179705‑4179973
                                                                                                                                                 |                                                                                                                           
aTAGCTAACTATGTGACTGGTGCGAATGAAGGAAGCCAACGCCGTCACAAGCTGAATAGCGACGGATAGAAAAGATTTGTTCGTTGGAGCCTGGCCTATCCAGGCCTCCGTCGAAGACCGCAGGAGTTTCGCAAGAAACTTAATCCCCt                                                                                                                          <  1:40359/149‑1 (MQ=255)
   gCTAACTATGTGACTGGTGCGAATGAAGGAAGCCAACGCCGTCACAAGCTGAATAGCGACGGATAGAAAAGATTTGTTCGTTGGAGCCTGGCCTATCCAGGCCTCCGTCGAAGACCGCAGGAGTTTCGCAAGAAACTTAATCCCCTGc                                                                                                                        <  8:147594/148‑1 (MQ=255)
   gCTAACTATGTGACTGGTGCGAATGAAGGAAGCCAACGCCGTCACAAGCTGAATAGCGACGGATAGAAAAGATTTGTTCGTTGGAGCCTGGCCTATCCAGGCCTCCGTCGAAGACCGCAGGAGTTTCGCAAGAAACTTAATCCCCTGCg                                                                                                                       <  8:78394/149‑1 (MQ=255)
      aaCTATGTGACTGGTGCGAATGAAGGAAGCCAACGCCGTCACAAGCTGAATAGCGACGGATAGAAAAGATTTGTTCGTTGGAGCCTGGCCTATCCAGGCCTCCGTCGAAGACCGCAGGAGTTTCGCAAGAAACTTAATCCCCTg                                                                                                                         >  8:73037/1‑144 (MQ=255)
      aaCTATGTGACTGGTGCGAATGAAGGAAGCCAACGCCGTCACAAGCTGAATAGCGACGGATAGAAAAGATTTGTTCGTTGGAGCCTGGCCTATCCAGGCCTCCGTCGAAGACCGCAGGAGTTTCGCAAGAAACTTAATCCCCTg                                                                                                                         <  7:73037/144‑1 (MQ=255)
           tgtgACTGGTGCGAATGAAGGAAGCCAACGCCGTCACAAGCTGAATAGCGACGGATAGAAAAGATTTGTTCGTTGGAGCCTGGCCTATCCAGGCCTCCGTCGAAGACCGCAGGAGTTTCGCAAGAAACTTAATCCCCTGCGTAGACgg                                                                                                                <  2:167767/148‑1 (MQ=255)
               aCTGGTGCGAATGAAGGAAGCCAACGCCGTCACAAGCTGAATAGCGACGGATAGAAAAGATTTGTTCGTTGGAGCCTGGCCTATCCAGGCCTCCGTCGAAGACCGCAGGAGTTTCGCAAGAAACTTAATCCCCTGCGTAGACGGTGa                                                                                                             >  3:57116/1‑147 (MQ=255)
                 tGGTGCGAATGAAGGAAGCCAACGCCGTCACAAGCTGAATAGCGACGGATAGAAAAGATTTGTTCGTTGGAGCCTGGCCTATCCAGGCCTCCGTCGAAGACCGCAGGAGTTTCGCAAGAAACTTAATCCCCTGCGTAGACGGTGACAg                                                                                                          >  5:46067/1‑148 (MQ=255)
                   gTGCGAATGAAGGAAGCCAACGCCGTCACAAGCTGAATAGCGACGGATAGAAAAGATTTGTTCGTTGGAGCCTGGCCTATCCAGGCCTCCGTCGAAGACCGCAGGAGTTTCGCAAGAAACTTAATCCCCTGCGTAGACGGTGACAGAAc                                                                                                       <  4:57116/149‑1 (MQ=255)
                   gTGCGAATGAAGGAAGCCAACGCCGTCACAAGCTGAATAGCGACGGATAGAAAAGAGTTGTTCGTTGGAGCCTGGCCTATCCAGGCCTCCGTCGAAGACCGCAGGAGTTTCGCAAGAAACTTAATCCCCTGCGTAGACGGTGACAGAAc                                                                                                       >  2:90507/1‑149 (MQ=255)
                    tGCGAATGAAGGAAGCCAACGCCGTCACAAGCTGAATAGCGACGGATAGAAAAGATTTGTTCGTTGGAGCCTGGCCTATCCAGGCCTCCGTCGAAGACCGCAGGAGTTTCGCAAGAAACTTAATCCCCTGCGTAGACGGTGACAGAACg                                                                                                      <  1:164613/149‑1 (MQ=255)
                           gaaggaagCCAACGCCGTCACAAGCTGAATAGCGACGGATAGAAAAGATTTGTTCGTTGGAGCCTGGCCTATCCAGGCCTCCGTCGAAGACCGCAGGAGTTTCGCAAGAAACTTAATCCCCTGCGTAGACGGTGACAGAACGCTAAGat                                                                                               >  2:200047/1‑149 (MQ=255)
                             aggaagCCAACGCCGTCACAAGCTGAATAGCGACGGATAGAAAAGATTTGTTCGTTGGAGCCTGGCCTATCCAGGCCTCCGTCGAAGACCGCAGGAGTTTCGCAAGAAACTTAATCCCCTGCGTAGAc                                                                                                                  >  6:37259/1‑128 (MQ=255)
                             aggaagCCAACGCCGTCACAAGCTGAATAGCGACGGATAGAAAAGATTTGTGCGTTGGAGCCTGGCCTATCCAGGCCTCCGTCGAAGACCGCAGGAGTTTCGCAAGAAACTTAATCCCCTGCGTAGAc                                                                                                                  <  5:37259/128‑1 (MQ=255)
                              ggaagCCAACGCCGTCACAAGCTGAATAGCGACGGATAGAAAAGATTTGTTCGTTGGAGCCTGGCCTATCCAGGCCTCCGTCGAAGACCGCAGGAGTTTCGCAAGAAACTTAATCCCCTGCGTAGACGGTGACAGAACGCTAAGattat                                                                                            >  5:115334/1‑149 (MQ=255)
                                  gCCAACGACGTCACAATCTGAATAGCGACTGATAGAAAAGATTTGTTCTTTGGAGCCTGTCCTATCCAGGCCTACGTCGAAGACCGCAGGAGTTTCGCAAGAAACTTAATCCCCTGCGTAGACGGTGACAGAACGCTAAGATTATTCtt                                                                                        <  2:46155/149‑1 (MQ=255)
                                   ccAACGCCGTCACAAGCTGAATAGCGACGGATAGAAAAGATTTGTTCGTTGGAGCCTGGCCTATCCAGGCCTCCGTCGAAGACCGCAGGAGTTTCGCAAGAAACTTAATCCCCTGCGTAGACGGTGACAGAACGc                                                                                                     <  1:71785/135‑1 (MQ=255)
                                   ccAACGCCGTCACAAGCTGAATAGCGACGGATAGAAAAGATTTGTTCGTTGGAGCCTGGCCTATCCAGGCCTCCGTCGAAGACCGCAGGAGTTTCGCAAGAAACTTAATCCCCTGCGTAGACGGTGACAGAACGc                                                                                                     >  2:71785/1‑135 (MQ=255)
                                    cAACGCCGTCACAAGCTGAATAGCGACGGATAGAAAAGATTTGTTCGTTGGAGCCTGGCCTATCCAGGCCTCCGTCGAAGACCGCAGGAGTTTCGCAAGAAACTTAATCCCCTGCGTAGACGGTGACAGAACGCTAAGATTATTCtttt                                                                                      <  1:200047/149‑1 (MQ=255)
                                       cGCCGTCACAAGCTGAATAGCGACGGATAGAAAAGATTTGTTCGTTGGAGCCTGGCCTATCCAGGCCTCCGTCGAAGACCGCAGGAGTTTCGCAAGAAACTTAATCCCCTGCGTAGACGGTGACAGAACGCTAAGATTATTCTTTtata                                                                                   <  6:115334/149‑1 (MQ=255)
                                                  gCTGAATAGCGACGGATAGAAAAGATTTGTTCGTTGGAGCCTGGCCTATCCAGGCCTCCGTCGAAGACCGCAGGAGTTTCGCAAGAAACTTAATCCCCTGCGTAGACGGTGACAGAACGCTAAGATTATTCTTTTATATTCTGGCTTGt                                                                        >  4:80297/1‑149 (MQ=255)
                                                  gCTGAATAGCGACGGATAGAAAAGATTTGTTCGTTGGAGCCTGGCCTATCCAGGCCTCCGTCGAAGACCGCAGGAGTTTCGCAAGAAACTTAATCCCCTGCGTAGACGGTGACAGAACGCTAAGATTATTCTTTTATATTCTGGCTTGt                                                                        <  8:7352/149‑1 (MQ=255)
                                                    tGAATAGCGACGGATAGAAAAGATTTGTTCGTTGGAGCCTGGCCTATCCAGGCCTCCGTCGAAGACCGCAGGAGTTTCGCAAGAAACTTAATCCCCTGCGTAGACGGTGACAGAACGCTAAGATTATTCTTTTATATTCTGGCTTGttt                                                                      >  5:12025/1‑149 (MQ=255)
                                                    tGAATAGCGACGGATAGAAAAGATTTGTTCGTTGGAGCCTGGCCTATCCAGGCCTCCGTCGAAGACCGCAGGAGTTTCGCAAGAAACTTAATCCCCTGCGTAGACGGTGACAGAACGCTAAGATTATTCTTTTATATTCTGGCTTGttt                                                                      >  5:14505/1‑149 (MQ=255)
                                                           cGACGGATAGAAAAGATTTGTTCGTTGGAGCCTGGCCTATCCAGGCCTCCGTCGAAGACCGCAGGAGTTTCGCAAGAAACTTAATCCCCTGCGTAGACGGTGACAGAACGCTAAGATTATTCTTTTATATTCTGGCTTGTTTCTGCTCa                                                               <  3:16179/149‑1 (MQ=255)
                                                                 aTAGAAAAGATTTGTTCGTTGGAGCCTGGCCTATCCAGGCCTCCGTCGAAGACCGCAGGAGTTTCGCAAGAAACTTAATCCCCTGCGTAGACGGTGACAGAACGCTAAGATTATTCTTTTATATTCTGGCTTGTTTCTGCTCACCGTaa                                                         >  5:55309/1‑149 (MQ=255)
                                                                 aTAGAAAAGATTTGTTCGTTGGAGCCTGGCCTATCCAGGCCTCCGTCGAAGACCGCAGGAGTTTCGCAAGAAACTTAATCCCCTGCGTAGACGGTGACAGAACGCTAAGATTATTCTTTATATTCTGGCTTGTTTCTGCTCACCGTAAt                                                        <  1:90507/149‑1 (MQ=255)
                                                                    gAAAAGATTTGTTCGTTGGAGCCTGGCCTATCCAGGCCTCCGTCGAAGACCGCAGGAGTTTCGCAAGAAACTTAATCCCCTGCGTAGACGGTGACAGAACGCTAAGATTATTCTTTTATATTCTGGCTTGTTTCTGCTCACCGTAATTa                                                      <  6:46067/149‑1 (MQ=255)
                                                                        aGATTTGTTCGTTGGAGCCTGGCCTATCCAGGCCTCCGTCGAAGACCGCAGGAGTTTCGCAAGAAACTTAATCCCCTGCGTAGACGGTGACAGAACGCTAAGATTATTCTTTTATATTCTGGCTTGTTTCTGCTCACCGTAATTAAGAc                                                  <  3:80297/149‑1 (MQ=255)
                                                                               ttCGTTGGAGCCTGGCCTATCCAGGCCTCCGTCGAAGACCGCAGGAGTTTCGCAAGAAACTTAATCCCCTGCGTAGACGGTGACAGAACGCTAAGATTATTCTTTTATATTCTgg                                                                             <  7:68692/115‑1 (MQ=255)
                                                                               ttCGTTGGAGCCTGGCCTATCCAGGCCTCCGTCGAAGACCGCAGGAGTTTCGCAAGAAACTTAATCCCCTGCGTAGACGGTGACAGAACGCTAAGATTATTCTTTTATATTCTgg                                                                             >  8:68692/1‑115 (MQ=255)
                                                                                   ttGGAGCCTGGCCTATCCAGGCCTCCGTCGAAGACCGCAGGAGTTTCGCAAGAAACTTAATCCCCTGCGTAGACGGTGACAGAACGCTAAGATTATTCTTTTATATTCTGGCTTGTTTCTGCTCACCGTAATTAAGACGCTCTCTCCGt                                       >  6:94552/1‑149 (MQ=255)
                                                                                      gAGCCTGGCCTATCCAGGCCTCCGTCGAAGACCGCAGGAGTTTCGCAAGAAACTTAATCCCCTGCGTAGACGGTGACAGCACGCTAAGATTATTCTTTTATATTCTGGCTTGTTTCTGCTCACCGTAATTAAGACGCTCTCTCCGTTTg                                    >  7:148665/1‑149 (MQ=255)
                                                                                          cTGGCCTATCCAGGCCTCCGTCGAAGACCGCAGGAGTTTCGCAAGAAACTTAATCCCCTGCGTAGACGGTGACAGAACGCTAAGATTATTCTTTTATATTCTGGCTTGTTTCTGCTCACCGTAATTAAGACGCTCTCTCCGTTTggag                                 >  5:1953/1‑148 (MQ=255)
                                                                                                  tCCAGGCCTCCGTCGAAGACCGCAGGAGTTTCGCAAGAAACTTAATCCCCTGCGTAGACGGTGACAGAACGCTAAGATTATTCTTTTATATTCTGGCTTGTTTCTGCTCACCGTAATTAAGACGCTCTCTCCGTTTGGAGGagtgaa                          <  7:76505/147‑1 (MQ=255)
                                                                                                  tCCAGGCCTCCGTCGAAGACCGCAGGAGTTTCGCAAGAAACTTAATCCCCTGCGTAGACGGTGACAGAACGCTAAGATTATTCTTTTATATTCTGGCTTGTTTCTGCTCACCGTAATTAAGACGCTCTCTCCGTTTGGAGGagtgaa                          >  8:76505/1‑147 (MQ=255)
                                                                                                      ggCCTCCGTCGAAGACCGCAGGAGTTTCGCAAGAAACTTAATCCCCTGCGTAGACGGTGACAGAACGCTAAGATTATTCTTTTATATTCTGGCTTGTTTCTGCTCACCGTAATTAAGACGCTCTCTCCGTTTGGAGGAGTGAAGTGAGt                    >  2:138011/1‑149 (MQ=255)
                                                                                                       gCCTCCGTCGAAGACCGCAGGAGTTTCGCAAGAAACTTAATCCCCTGCGTAGACGGTGACAGAACGCTAAGATTATTCTTTTATATTCTGGCTTGTTTCt                                                                    <  1:102390/100‑1 (MQ=255)
                                                                                                       gCCTCCGTCGAAGACCGCAGGAGTTTCGCAAGAAACTTAATCCCCTGCGTAGACGGTGACAGAACGCTAAGATTATTCTTTTATATTCTGGCTTGTTTCt                                                                    >  2:102390/1‑100 (MQ=255)
                                                                                                                gAAGACCGCAGGAGTTTCGCAAGAAACTTAATCCCCTGCGTAGACGGTGACAGAACGCTAAGATTATTCTTTTATATTCTGGCTTGTTTCTGCTCACCGTAATTAAGACGCTCTCTCCGTTTGGAGGAGTGAAGTGAGtt                   >  6:74739/1‑140 (MQ=255)
                                                                                                                gAAGACCGCAGGAGTTTCGCAAGAAACTTAATCCCCTGCGTAGACGGTGACAGAACGCTAAGATTATTCTTTTATATTCTGGCTTGTTTCTGCTCACCGTAATTAAGACGCTCTCTCCGTTTGGAGGAGTGAAGTGAGtt                   <  5:74739/140‑1 (MQ=255)
                                                                                                                 aaGACCGCAGGAGTTTCGCAAGAAACTTAATCCCCTGCGTAGACGGTGACAGAACGCTAAGATTATTCTTTTATATTCTGGCTTGTTTc                                                                     >  7:36562/1‑89 (MQ=255)
                                                                                                                 aaGACCGCAGGAGTTTCGCAAGAAACTTAATCCCCTGCGTAGACGGTGACAGAACGCTAAGATTATTCTTTTATATTCTGGCTTGTTTc                                                                     <  8:36562/89‑1 (MQ=255)
                                                                                                                 aaGACCGCAGGAGTTTCGCAAGAAACTTAATCCCCTGCGTAGACGGTGACAGAACGCTAAGATTATTCTTTTATATTCTGGCTTGTTTCTGCTCACCGTAATTAAGa                                                   >  4:142297/1‑107 (MQ=255)
                                                                                                                 aaGACCGCAGGAGTTTCGCAAGAAACTTAATCCCCTGCGTAGACGGTGACAGAACGCTAAGATTATTCTTTTATATTCTGGCTTGTTTCTGCTCACCGTAATTAAGa                                                   <  3:142297/107‑1 (MQ=255)
                                                                                                                   gACCGCAGGAGTTTCGCAAGAAACTTAATCCCCTGCGTAGACGGTGACAGAACGCTAAGATTATTCTTTTATATTCTGGCTTGTTTCTGCTCACCGTAATTAAGACGCTCTCTCCGTTTGGAGGAGTGAAGTGAGTTCCAGAGATTTtc       <  6:55309/149‑1 (MQ=255)
                                                                                                                        cAGGAGTTTCGCAAGAAACTTAATCCCCTGCGTAGACGGTGACAGAACGCTAAGATTATTCTTTTATATTCTGGCTTGTTTCTGCTCACCGTAATTAAGACGCTCTCTCCGTTTGGAGGAGTGAAGTGAGTTCCAGAGATTTTCTCTgg  <  6:1953/149‑1 (MQ=255)
                                                                                                                                                 |                                                                                                                           
ATAGCTAACTATGTGACTGGTGCGAATGAAGGAAGCCAACGCCGTCACAAGCTGAATAGCGACGGATAGAAAAGATTTGTTCGTTGGAGCCTGGCCTATCCAGGCCTCCGTCGAAGACCGCAGGAGTTTCGCAAGAAACTTAATCCCCTGCGTAGACGGTGACAGAACGCTAAGATTATTCTTTTATATTCTGGCTTGTTTCTGCTCACCGTAATTAAGACGCTCTCTCCGTTTGGAGGAGTGAAGTGAGTTCCAGAGATTTTCTCTGG  >  NC_000913/4179705‑4179973

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.