| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 3902267 | 130 (1.580) | 3 (0.040) | 3/256 | NT | 2.3% | intergenic (‑47/+22) | bglH/bglB | carbohydrate‑specific outer membrane porin, cryptic/cryptic phospho‑beta‑glucosidase B |
| ? | NC_000913 | = 3902271 | 126 (1.580) | intergenic (‑51/+18) | bglH/bglB | carbohydrate‑specific outer membrane porin, cryptic/cryptic phospho‑beta‑glucosidase B | |||||
| Rejected: Frequency below/above cutoff threshold. | |||||||||||
AAGGCGTTGTTCCACCGTTAATGATTCAGCCAATGATTGTGCAGAAAAGGCTAACGGTGCCATTAATAAGATGGCAGAGGTAATAAGATTTCGTCTAAACATAATATCCCTTTATGGTGCAAAGAAAGAATTAACGCATCGCATCCAGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/3902119‑3902267‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cagaACAGTCTGGATGCGATGCGTTAATTCTTTCTTTGCACCATAAAGGGATATTATGTTTAGACGAAATCTTATTACCTCTGCCATCTTATTAATGGCACCGTTAGCCTTTTCTGCACAATCATTGGCTGAATCATTAACGGTGGAACAA < NC_000913/3902271‑3902125 AAGGCGTTGTTCCACCGTTAATGATTCAGCCAATGATTGTGCAGAAAAGGCTAACGGTGCCATTAATAAGATGGCAGAGGTAATAAGATTTCGTCTAAACATAATATCCCTTTATGGTGCAAAGAAAGAATTAACGCATCGCATCCAGA > 1:114599/1‑149AAGGCGTTGTTCCACCGTTAATGATTCAGCCAATGATTGTGCAGAAAAGGCTAACGGTGCCATTAATAAGATGGCAGAGGTAATAAGATTTCGTCTAAACATAATATCCCTTTATGGTGCAAAGAAAGAATTAACGCATCGCATCCAG < 7:58489/148‑1AAGGCGTTGTTCCACCGTTAATGATTCAGCCAATGATTGTGCAGAAAAGGCTAACGGTGCCATTAATAAGATGGCAGAGGTAATAAGATTTCGTCTAAACATAATATCCCTTTATGGTGCAAAGAAAGAATTAACGCATCGCATCCA < 1:126338/147‑1 TATCCCTTTATGGTGCAAAGAAAGAATTAACGCATCGCATCCAGACTGTTCTGGATGCGATGCGTTAATTCTTTCTTTGCACCATAAAGGGATATTATGTTTAGACGAAATCTTATTACCT > 3:318174/1‑121 TATCCCTTTATGGTGCAAAGAAAGAATTAACGCATCGCATCCAGACTGTTCTGGATGCGATGCGTTAATTCTTTCTTTGCACCATAAAGGGATATTATGTTTAGACGAAATCTTATTACCT < 4:318174/121‑1 GCATCGCATCCAGACTGTTCTGAATGCGATGCGTTAATTCTTTCTTTGCACCATAAAGGGATATTATGTTTAGACGAAATCTTATTACCTCTGCCATCTTATTAATGGCACCGTTAGCCTTTTCTGCACAATCATTGGCTGAATCATT > 5:307506/1‑148 CAGAACAGTCTGGATGCGATGCGTTAATTCTTTCTTTGCACCATAAAGGGATATTATGTTTAGACTAAATCTTATTACCTCTGCCATCTTATTAATGGCACCGTTAGCCTTTTCTGCACAATCATTGGCTTAATCATTAACGGTGGAA < 1:37878/148‑1 AGAACAGTCTGGATGCGATGCGTTAATTCTTTCTTTGCACCATAAAGGGATATTATGTTTAGACGAAATCTTATTACCTCTGCCATCTTATTAATGGCACCGTTAGCCTTTTCTGCACAATCATTGGCTGAATCATTAACGTTGGAAC > 2:328970/1‑148 AGAACAGTCTGGATGCGATGCGTTAATTCTTTCTTTGCACCATAAAGGGATATTATGTTTAGACGAAATCTTATTACCTCTGCCATCTTATTAATGGCACCGTTAGCCTTTTC < 5:115658/113‑1 AGAACAGTCTGGATGCGATGCGTTAATTCTTTCTTTGCACCATAAAGGGATATTATGTTTAGACGAAATCTTATTACCTCTGCCATCTTATTAATGGCACCGTTAGCCTTTTC > 6:115658/1‑113 GAACAGTCTGGATGCGATGCGTTAATTCTTTCTTTGCACCATAAAGGGATATTATGTTTAGACGAAATCTTATTACCTCTGCCATCTTATTAATGGCACCGTTAGCCTTTTCTGCACAATCATTGGCTGAATCATTAACGGTGGAACAA < 5:292423/149‑1 AAGGCGTTGTTCCACCGTTAATGATTCAGCCAATGATTGTGCAGAAAAGGCTAACGGTGCCATTAATAAGATGGCAGAGGTAATAAGATTTCGTCTAAACATAATATCCCTTTATGGTGCAAAGAAAGAATTAACGCATCGCATCCAGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/3902119‑3902267‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cagaACAGTCTGGATGCGATGCGTTAATTCTTTCTTTGCACCATAAAGGGATATTATGTTTAGACGAAATCTTATTACCTCTGCCATCTTATTAATGGCACCGTTAGCCTTTTCTGCACAATCATTGGCTGAATCATTAACGGTGGAACAA < NC_000913/3902271‑3902125 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |