| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | 3427078 = | NA (NA) | 2 (0.030) | 3/246 | NT | 100% | noncoding (75/77 nt) | ileU | tRNA‑Ile |
| ? | NC_000913 | = 4037236 | 0 (0.000) | intergenic (+19/‑24) | ileT/alaT | tRNA‑Ile/tRNA‑Ala | |||||
ATTTAATCACTACAGAGATGGTGGAGCTATGCGGGATCGAACCGCAGACCTCCTGCGTGCAAAGCAGGCGCTCTCCCAGCTGAGCTATAGCCCCATAACATGTAGTTAAAACCTCTTCAAATTTGCCGTGCAAATTTGGTAGGCCTGAGTGGACTTGAACCACCGACCTCACCCTTATCAGGGGTGCGCTCTAACCACCTGAGCTACAAGCCTGTAGAGGTTTTACTGCTCATTTTCATC > NC_000913/3426940‑3427179 | atgtaATCACTACAGAGATGGTGGAGCTCTGCGGGATCGAACCGCAGACCTCCTGCGGGCAAAGCAGGCGCTCTCCCAGCTGAGCTATAGCCCCATAACATGTAGTTAAAACCTCTTCAAATTTGCCGTGCAAATTTGGTAGGCCTGa < 5:23647/145‑1 (MQ=0) ccgaTAACATGTAGTTAAAACGTCTTCAAATTTGCAGTGCATATTTGGTTGGCCGGAGGGGACTTGAACCACGGACCTCTCCCTTATCATGGGTGCGCTCTAACGTCCTGAGCTTCAAGCCTGTAGAGGTTTTACTGCTCATTTtcatc < 8:332086/146‑1 (MQ=1) | ATTTAATCACTACAGAGATGGTGGAGCTATGCGGGATCGAACCGCAGACCTCCTGCGTGCAAAGCAGGCGCTCTCCCAGCTGAGCTATAGCCCCATAACATGTAGTTAAAACCTCTTCAAATTTGCCGTGCAAATTTGGTAGGCCTGAGTGGACTTGAACCACCGACCTCACCCTTATCAGGGGTGCGCTCTAACCACCTGAGCTACAAGCCTGTAGAGGTTTTACTGCTCATTTTCATC > NC_000913/3426940‑3427179 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |