Predicted mutation
evidence seq id position mutation freq annotation gene description
JC JC NC_000913 3,560,930 IS5 (+) +4 bp 100% coding (520‑523/831 nt) glpG ← rhomboid intramembrane serine protease

New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 3560930 =0 (0.000)83 (1.010) 66/264 NT 100% coding (523/831 nt) glpG rhomboid intramembrane serine protease
?NC_000913 3652036 = NA (NA)noncoding (1195/1195 nt) IS5 repeat region
* ? NC_000913 = 35609330 (0.000)80 (0.970) 63/264 NT 100% coding (520/831 nt) glpG rhomboid intramembrane serine protease
?NC_000913 = 3653230 NA (NA)noncoding (1/1195 nt) IS5 repeat region

Only 100 of 180 total aligned reads displayed.

AAATGCCACTTTGCGGATCGCGTTCGCCACGTAGCCAGACGTAGCCCATCAGCGCATACACCACGCCAGAAAGCCCGCCAAACCACGGCCCGCTGAATTTTTGCTGCACATAGCCGCTTAACAGGGCGCTGATAAGCGTAATGACAATTAGCTTACCGCTACCGAGGCGTTTTTCCACCGCACCGCCGAGATACCACCACCAGAGCAGGTTAAAGAGGATATGCATCAGCGAGAAGTGCATTAACGCGTGGGTGAAGTAACGCCAGAACTCAAATTTCAGTGTTGGATCGAATGGC  >  NC_000913/3560783‑3561078
                                                                                                                                                   |                                                                                                                                                    
aaaactggggataacgccttaaatggcgaagaaacggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattagcaccttcct                                                                                                                                                      <  7:314365‑M1/1‑1 (MQ=255)
 aaactggggataacgccttaaatggcgaagaaacggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccTTa                                                                                                                                                    >  1:38599‑M1/147‑149 (MQ=255)
 aaTGCCACTTTGCGGATCGCGTTCGCCACGTAGCCAGACGTAGCCCATCAGCGCATACACCACGCCAGAAAGCCCGCCAAACCACGGCCCGCTGAATTTTTGCTGCACATAGCCGCTTAACAGGGCGCTGATAAGCGTAATGACAAt                                                                                                                                                      >  3:350260/1‑147 (MQ=255)
 aaTGCCACTTTGCGGATCGCGTTCGCCACGTAGCCAGACGTAGCCCATCAGCGCATACACCACGCCAGAAAGCCCGCCAAACCACGGCCCGCTGAATTTTTGCTGCACATAGCCGCTTAACAGGGCGCTGATAAGCGTAATGACAATTa                                                                                                                                                    <  5:83653/149‑1 (MQ=255)
      cACTTTGCGGATCGCGTTCGCCACGTAGCCAGACGTAGCCCATCAGCGCATACACCACGCCAGAAAGCCCGCCAAACCACGGCCCGCTGAATTTTTGCTGCACATAGCCGCTTAACAGGGCGCTGATAAGCGTAATGACAATTAGggaa                                                                                                                                               <  7:325350‑M1/149‑5 (MQ=255)
           taacgccttaaatggcgaagaaacggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccTTAGCTTACCGc                                                                                                                                           <  5:279306‑M1/12‑1 (MQ=255)
             cGGATCGCGTTCGCCACGTAGCCAGACGTAGCCCATCAGCGCATACACCACGCCAGAAAGCCCGCCAAACCACGGCCCGCTGAATTTTTGCTGCACATAGCCGCTTAACAGGGCGCTGATAAGCGTAATGACAATTAGggaaggtgcga                                                                                                                                        <  4:51057‑M1/149‑12 (MQ=255)
             acgccttaaatggcgaagaaacggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccTTAGCTTACCGCTAc                                                                                                                                        >  4:346137‑M1/135‑149 (MQ=255)
                    aaatggcgaagaaacggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccTTAGCTTACCGCTACCGAGGCg                                                                                                                                 <  4:182021‑M1/22‑1 (MQ=255)
                     aatggcgaagaaacggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccTTAGCTTACCGCTACCGAGGCGt                                                                                                                                <  5:129156‑M1/23‑1 (MQ=255)
                      ttCGCCACGTAGCCAGACGTAGCCCATCAGCGCATACACCACGCCAGAAAGCCCGCCAAACCACGGCCCGCTGAATTTTTGCTGCACATAGCCGCTTAACAGGGCGCTGATAAGCGTAATGACAATTAGggaaggtgcgaacaagtccc                                                                                                                               >  7:351141‑M1/1‑129 (MQ=255)
                         gCCACGTAGCCAGACGTAGCCCATCAGCGCATACACCACGCCAGAAAGCCCGCCAAACCACGGCCCGCTGAATTTTTGCTGCACATAGCCGCTTAACAGGGCGCTGATAAGCGTAATGACAATTAGggaaggtgcgaacaagtccctga                                                                                                                            >  8:78311‑M1/1‑126 (MQ=255)
                          cgaagaaacggtctaaataggctgattcaaggcatttacgtgagaaaaaatcggctcaaaaatgaagaaatgaaatgactgattcagccgagaagaatttccccgcttattcgcacaatccTAAGCTTTCCGCTACCGAGGCGTTTTTc                                                                                                                           <  5:116624‑M1/28‑1 (MQ=255)
                            aagaaacggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccTTAGCTTACCGCTACCGAGGCGTTTTTCca                                                                                                                         >  1:126463‑M1/120‑149 (MQ=255)
                            aagaaacggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccTTAGCTTACCGCTACCGAGGCGTTTTTCca                                                                                                                         >  7:241021‑M1/120‑149 (MQ=255)
                                 gCCAGACGTAGCCCATCAGCGCATACACCACGCCAGAAAGCCCGCCAAACCACGGCCCGCTGAATTTTTGCTGCACATAGCCGCTTAACAGCGCGCTGATAAGCGTAATGACAATTAGggaaggggcgaacaagtccctgatatgaga                                                                                                                     <  8:209488‑M1/148‑31 (MQ=255)
                                  ccAGACGTAGCCCATCAGCGCATACACCACGCCAGAAAGCCCGCCAAACCACGGCCCGCTGAATTTTTGCTGCACATAGCCGCTTAACAGGGCGCTGATAAGCGTAATGACAATTAGggaaggtgcgaacaagtccctgatatgagat                                                                                                                    >  5:15192‑M1/1‑117 (MQ=255)
                                   cAGACGTAGCCCATCAGCGCATACACCACGCCAGAAAGCCCGCCAAACCACGGCCCGCTGAATTTTTGCTGCACATAGCCGCTTAACAGGGCGCTGATAAGCGTAATGACAATTAGggaaggtgcgaacaagtccctgatatgagatca                                                                                                                  >  1:125906‑M1/1‑116 (MQ=255)
                                   cAGACGTAGCCCATCAGCGCATACACCACGCCAGAAAGCCCGCCAAACCACGGCCCGCTGAATTTTTGCTGCACATAGCCGCTTAACAGGGCGCTGATAAGCGTAATGACAATTAGggaaggtgcgaacaagtccctgatatgagatca                                                                                                                  >  8:226632‑M1/1‑116 (MQ=255)
                                    aGACGTAGCCCATCAGCGCATACACCACGCCAGAACGCCCGCCAAACCACGGCCCGCTGAATTTATGCTGCACATAGCCGCATAACAGGTCGCTGATAAGCGTAATGACAATTAGgcaaggtgcgaacaagtcccggat                                                                                                                           >  6:110082‑M1/1‑115 (MQ=255)
                                    aGACGTAGCCCATCAGCGCATACACCACGCCAGAAAGCCCGCCAAACCACGGCCCGCTGAATTTTTGCTGCACATAGCCGCTTAACAGGGCGCTGATAAGCGTAATGACAATTAGggaaggtgcgaacaagtccctgatattagatcat                                                                                                                 >  8:278432‑M1/1‑115 (MQ=255)
                                      aCGTAGCCCATCAGCGCATACACCACGCCAGAAAGCCCGCCAAACCACGGCCCGCTGAATTTTTGCTGCACATAGCCGCTTAACAGGGCGCTGATAAGCGTAATGACAATTAGggaaggtgcgaacaagtccctgatatgagatcatgt                                                                                                               <  7:83944‑M1/149‑37 (MQ=255)
                                      aCGTAGCCCATCAGCGCATACACCACGCCAGAAAGCCCGCCAAACCACGGCCCGCTGAATTTTTGCTGCACATAGCCGCTTAACAGGGCGCTGATAAGCGTAATGACAATTAGggaaggtgcgaacaagtccctgatatgagatcatgt                                                                                                               <  1:31967‑M1/149‑37 (MQ=255)
                                         tAGCCCATCAGCGCATACACCACGCCAGAAAGCCCGCCAAACCACGGCCCGCTGAATTTTTGCTGCACATAGCCGCTTAACAGGGCGCTGATAAGCGTAATGACAATTAGggaaggtgcgaacaagtccctgatatgagatcatgtttg                                                                                                            <  1:44199‑M1/149‑40 (MQ=255)
                                         aataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgagtgagtcagccgagatgaatttccccgcttattcgcaccttccTTAGCTTAGCGCTACCGAGGCGttt                                                                                                                              >  5:167136‑M1/107‑131 (MQ=255)
                                         aataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccTTAGCTTACCGCTACCGAGGCGTTTttccaccgcaccccc                                                                                                               <  5:35691‑M1/40‑4 (MQ=255)
                                          aGCCCATCAGCGCATACACCACGCCAGAAAGCCCGCCAAACCACGGCCCGCTGAATTTTTGCTGCACATAGCCGCTTAACAGGGCGCTGATAAGCGTAATGACAATTAGggaaggtgcgaacaagtccctgatatgagatcatgtttgt                                                                                                           >  2:164607‑M1/1‑109 (MQ=255)
                                             ggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccTTAGCTTACCGCTACCGAGGCGTTTTTCCACCGCACCGCCGAGATac                                                                                                        >  4:227932‑M1/103‑149 (MQ=255)
                                             ccATCAGCGCATACACCACGCCAGAAAGCCCGCCAAACCACGGCCCGCTGAATTTTTGCTGCACATAGCCGCTTAACAGGGCGCTGATAAGCGTAATGACAATTAGggaaggtgcgaacaagtccctgatatgagatcatgtttgtcat                                                                                                        >  1:35752‑M1/1‑106 (MQ=255)
                                              gctgattcaaggcatttacgggagaaaaactcggctcaacgaggaagaaatgaaatgactgagtcagccgagaagcatttccccgcttattcgcagcttccTTAGCTTACCGCTACCGAGGCGTGTTTCCACCGCACCGCCGAgatcg                                                                                                        <  2:229639‑M1/47‑3 (MQ=255)
                                               cttattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccTTAGCTTACCGCTACCGAGGCGTTTTTCCACCGCACCGCCGAGATacca                                                                                                      >  2:223607‑M1/101‑149 (MQ=255)
                                                 gattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgtgtcagccgagaagaatttccccgcttattcgcaccttccTTAGCTTACCGCTACCGAGGCGTTTTTCCACCGCACCGCCGAGATaccac                                                                                                     <  4:310210‑M1/50‑1 (MQ=255)
                                                  attcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccTTAGCTTACCGCTACCGAGGCGTTTTTCCACCGCACCGCCGAGATaccac                                                                                                     >  3:182021‑M1/98‑147 (MQ=255)
                                                   gcgcATACACCACGCCAGAAAGCCCGCCAAACCACGGCCCGCTGAATTTTTGCTGCACATAGCCGCTTAACAGGGCGCTGATAAGCGTAATGACAATTAGggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggag                                                                                                  <  5:39341‑M1/149‑50 (MQ=255)
                                                      aaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccTTAGCTTACCGCTACCGAGGCGTTTTTCCACCGCACCGCCGAGATaccaccac                                                                                                  <  2:344913‑M1/53‑1 (MQ=255)
                                                       aggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccTTAGCTTACCGCTACCGAGGCGTTTTTCCACCGCACCGCCGAGATAccaccacca                                                                                                <  6:206623‑M1/55‑1 (MQ=255)
                                                       aTACACCACGCCAGAAAGCCCGCCAAACCACGGCCCGCTGAATTTTTGCTGCACATAGCCGCTTAACAGGGCGCTGATAAGCGTAATGACAATTAGggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagcca                                                                                               >  1:24543‑M1/1‑96 (MQ=255)
                                                       aTACACCACGCCAGAAAGCCCGCCAAACCACGGCCCGCTGAATTTTTGCTGCACATAGCCGCTTAACAGGGCGCTGATAAGCGTAATGACAATTAGggaaggtgcgaacaagtccctgatatga                                                                                                                       >  5:299754‑M1/1‑96 (MQ=255)
                                                        tACACCACGCCAGAAAGCCCGCCAAACCACGGCCCGCTGAATTTTTGCTGCACATAGCCGCTTAACAGGGCGCTGATAAGCGTAATGACAATTAGggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccata                                                                                             >  8:326017‑M1/1‑95 (MQ=255)
                                                        tACACCACGCCAGAAAGCCCGCCAAACCACGGCCCGCTGAATTTTTGCTGCACATAGCCGCTTAACAGGGCGCTGATAAGCGTAATGACAATTAGggaaggtgcgaacaagtccctgatatgagatcatgt                                                                                                               >  4:206029‑M1/1‑95 (MQ=255)
                                                          caccacGCCAGAAAGCCCGCCAAACCACGGCCCGCTGAATTTTTGCTGCACATAGCCGCTTAACAGGGCGCTGATAAGCGTAATGACAATTAGggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatag                                                                                            <  7:78311‑M1/148‑56 (MQ=255)
                                                           accacGCCAGAAAGCCCGCCAAACCACGGCCCGCTGAATTTTTGCTGCACATAGCCGCTTAACAGGGCGCTGATAAGCGTAATGACAATTAGggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccataga                                                                                           >  8:227608‑M1/1‑92 (MQ=255)
                                                               cGCCAGAAAGCCCGCCAAACCACGGCCCGCTGAATTTTTGCTGCACATAGCCGCTTAACAGGGCGCTGATAAGCGTAATGACAATTAGggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagg                                                                                      <  2:24543‑M1/149‑62 (MQ=255)
                                                                   gagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccTTAGCTTACCGCTACCGAGGCGTTTTTCCACCGCACCGCCGAGATacca                                                                                                      <  8:25123‑M1/49‑1 (MQ=255)
                                                                    gAAAGCCCGCCAAACCACGGCCCGCTGATTTTTTGCTGCACATAGCCGCTTAACAGGGCGCTGATAAGCGTAATGACAATTAGggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttca                                                                                 >  5:260585‑M1/1‑83 (MQ=255)
                                                                     gaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccTTAGCTTACCGCTACCGAGGCGTTTTTCCACCGCACCGCCGAGATACCACCACCAGAGCAGGTTAAAGAgg                                                                                >  2:173340‑M1/79‑149 (MQ=255)
                                                                     aaaGCCCGCCAAACCACGGCCCGCTGAATTTTTGCTGCACATAGCCGCTTAACAGGGCGCTGATAAGCGTAATGACAATTAGggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcat                                                                                <  6:15192‑M1/149‑68 (MQ=255)
                                                                        gCCCGCCAAACCACGGCCCGCTGAATTTTTGCTGCACATAGCCGCTTAACATGGCGCTGATAAGCGTAATGACAATTAGggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcat                                                                             <  8:148773‑M1/149‑71 (MQ=255)
                                                                        gCCCGCCAAACCACGGCCCGCTGAATTTTTGCTGCACATAGCCGCTTAACAGGGCGCTGATAAGCGTAATGACAATTAGggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcat                                                                             <  6:127815‑M1/149‑71 (MQ=255)
                                                                         cccGCCAAACCACGGCCCGCTGAATTTTTGCTGCACATAGCCGCTTAACAGGGCGCTGATAAGCGTAATGACAATTAGggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcat                                                                             >  4:300743‑M1/1‑78 (MQ=255)
                                                                         cccGCCAAACCACGGCCCGCTGAATTTTTGCTGCACATAGCCGCTTAACAGGGCGCTGATAAGCGTAATGACAATTAGggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcat                                                                             >  7:240356‑M1/1‑78 (MQ=255)
                                                                          ccGCCAAACCACGGCCCGCTGAATTTTTGCTGCACATAGCCGCTTAACAGGGCGCTGATAAGCGTAATGACATTTAGggatggggcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatga                                                                           <  5:119623‑M1/149‑73 (MQ=255)
                                                                          ccGCCAAACCACGGCCCGCTGAATTTTTGCTGCACATAGCCGCTTAACAGGGCGCTGATAAGCGTAATGACAATTAGggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatga                                                                           <  8:240356‑M1/149‑73 (MQ=255)
                                                                          ccGCCAAACCACGGCCCGCTGAATTTTTGCTGCACATAGCCGCTTAACAGGGCGCTGATAAGCGTAATGACAATTAGggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatga                                                                           <  1:347783‑M1/149‑73 (MQ=255)
                                                                           atcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccTTAGCTTACCGCTACCGAGGCGTTTTTCCACCGCACCGCCGAGATACCACCACCAGAGCAGGTTAAAGAGGATATGc                                                                          >  6:35691‑M1/73‑149 (MQ=255)
                                                                                 tcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccTTAGCTTACCGCTACCGAGGCGTTTTTCCACCGCACCGCCGAGATACCACCACCAGAGCAGGTTAAAGAGGATATGCAt                                                                        <  1:169587‑M1/79‑1 (MQ=255)
                                                                                 tcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccTTAGCTTACCGCTACCGAGGCGTTTTTCCACCGCACCGCCGAGATACCACCACCAGAGCAGGTTAAAGAGGATATGCATCAGc                                                                    <  5:287697‑M1/83‑1 (MQ=255)
                                                                                   aaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccTTAGCTTACCGCTACCGAGGCGTTTTTCCACCGCACCGCCGAGATACCACCACCAGAGCAGGTTAAAGAGGATATGCATCAGc                                                                    <  1:206439‑M1/83‑1 (MQ=255)
                                                                                     cGGCCCGCTGAATTTTTGCTGCACATAGCCGCTTAACAGGGCGCTGATAAGCGTAATGACAATTAGggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaactt                                                                <  1:164607‑M1/149‑84 (MQ=255)
                                                                                     acatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccTTAGCTTACCGCTACCGCGGCGTTTTTCCACCGCACCGCCGAGATACCACCACCAGAGCAGGTTAAAGAGGATATGCATCAGCgag                                                                 <  6:354515‑M1/86‑1 (MQ=255)
                                                                                        tgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccTTAGCTTACCGCTACCGAGGCGTTTTTCCACCGCACCGCCGAGATACCACCACCAGAGCAGGTTAAAGAGGATATGCATCAGCGAGAAGt                                                             >  8:375325‑M1/60‑149 (MQ=255)
                                                                                         gaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccTTAGCTTACCGCTACCGAGGCGTTTTTCCACCGCACCGCCGAGATACCACCACCAGAGCAGGTTAAAGAGGa                                                                               >  6:118240‑M1/59‑130 (MQ=255)
                                                                                         gaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccTTAGCTTACCGCTACCGAGGCGTTTTTCCACCGCACCGCCGAGATACCACCACCAGAGCAGGTTAAAGAGGa                                                                               <  5:118240‑M1/72‑1 (MQ=255)
                                                                                          aagaaatgaaaagactgagtcagccgagaagaatttccccgcttattcgcaccttccTTAGCTTACCGCTACCGAGGCGTTTTTCCACCGCACCGCCGAGATACCACCACCAGAGCAGGTTAAAGAGGATATGTATCAGCGAGAAGTGc                                                           >  1:139291‑M1/58‑149 (MQ=255)
                                                                                            gaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccTTAGCTTACCGCTACCGAGGCGTTTTTCCTCCGCACCGCCGAGATACCACCACCAGAGCAGGTTAAAGAGGATATGCATCAGCGAGAAGTGCAt                                                         >  4:161346‑M1/56‑149 (MQ=255)
                                                                                            cTGAATTTTTGCTGCACATAGCCGCTTAACAGGGCGCTGATAAGCGTAATGACAATTAGggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcg                                                         >  5:114523‑M1/1‑59 (MQ=255)
                                                                                                   tttGCTGCACATAGCCGCTTAACAGGGCGCTGATAAGCGTAATGACAATTAGggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgaca                                                   <  7:227608‑M1/148‑97 (MQ=255)
                                                                                                     tgctgcACATAGCCGCTTAACAGGGCGCTGATAAGCGTAATGACAATTAGggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagt                                                 <  4:125944‑M1/148‑99 (MQ=255)
                                                                                                     tgactgagtcagccgagaagaatttccccgcttattcgcaccttccTTAGCTTACCGCTACCGAGGCGTTTTTCCACCGCACCGCCGAGATACCACCACCAGAGCAGGTTAAAGAGGATATGCATCAGCGAGAAGTGCATTAACGCGTg                                                >  6:279306‑M1/47‑149 (MQ=255)
                                                                                                        tgcACATAGCCGCTTAACAGGGCGCTGATAAGCGTAATGACAATTAGggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaat                                             >  1:216525‑M1/1‑47 (MQ=255)
                                                                                                               agccgagaagaatttccccgcttattcgcaccttccTTAGCTTACCGCTACCGAGGCGTTTTTCCACCGCACCGCCGAGATACCACCACCAGAGCAGGTTAAAGAGGATATGCATCAGCGAGAAGTGc                                                           >  1:73227‑M1/37‑128 (MQ=255)
                                                                                                               agccgagaagaatttccccgcttattcgcaccttccTTAGCTTACCGCTACCGAGGCGTTTTTCCACCGCACCGCCGAGATACCACCACCAGAGCAGGTTAAAGAGGATATGCATCAGCGAGAAGTGc                                                           <  2:73227‑M1/92‑1 (MQ=255)
                                                                                                                 ccgagaagaatttccccgcttattcgcaccttccTTAGCTTACCGCTACCGAGGCGTTTTTCCACCGCACCGCCGAGATACCACCACCAGAGCAGGTTAAAGAGGATATGCATCAGCGAGAAGTGCATTAACGCGTGGGTg                                            <  4:79543‑M1/107‑1 (MQ=255)
                                                                                                                 ccgagaagaatttccccgcttattcgcaccttccTTAGCTTACCGCTACCGAGGCGTTTTTCCACCGCACCGCCGAGATACCACCACCAGAGCAGGTTAAAGAGGATATGCATCAGCGAGAAGTGCATTAACGCGTGGGTg                                            >  3:79543‑M1/35‑141 (MQ=255)
                                                                                                                   gCTTAACAGGGCGCTGATAAGCGTAATGACAATTAGggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaag                                  >  1:54474‑M1/1‑36 (MQ=255)
                                                                                                                    agaagaatttccccgcttattcgcaccttccTTAGCTTACCGCTACCGAGGCGTTTTTCCACCGCACCGCCGAGATACCACCACCAGAGCAGGTTAAAGAGGATATGCATCAGCGAGAAGTGCATTAACGCGTgg                                               >  6:122028‑M1/32‑135 (MQ=255)
                                                                                                                    agaagaatttccccgcttattcgcaccttccTTAGCTTACCGCTACCGAGGCGTTTTTCCACCGCACCGCCGAGATACCACCACCAGAGCAGGTTAAAGAGGATATGCATCAGCGAGAAGTGCATTAACGCGTgg                                               <  5:122028‑M1/104‑1 (MQ=255)
                                                                                                                      aagaatttccccgcttattcgcaccttccTTAGCTTACCGCTACCGAGGCGTTTTTCCACCGCACCGCCGAGATACCACCACCAGAGCAGGTTAAAGAGGATATGCATCAGCGAGAAGTGCATTaa                                                      >  2:79989‑M1/30‑126 (MQ=255)
                                                                                                                       agaatttccccgcttattcgcaccttccTTAGCTTACCGCTACCGAGGCGTTTTTCCACCGCACCGCCGAGATACCACCACCAGAGCAGGTTAAAGAGGATATGCATCAGCGAGAAGTGCATTAACGCGTGGGTGAAGTATCGCCAGaa                              >  2:212082‑M1/29‑149 (MQ=255)
                                                                                                                       aaCAGGGCGCTGATAAGCGTAATGACAATTAGggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacaggg                                                                                     >  7:226031‑M1/1‑32 (MQ=255)
                                                                                                                        aCAGGGCGCTGATAAGCGTAATGACAATTAGggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgcc                              <  3:122825‑M1/148‑118 (MQ=255)
                                                                                                                          aGGGCGCTGATAAGCGTAATGACAATTAGggaaggtgcgaacaagtccctgatatgagatcatgtttgtca                                                                                                         >  2:39914‑M1/1‑29 (MQ=255)
                                                                                                                           tttccccgcttattcgcaccttccTTAGCTTACCGCTACCGAGGCGTTTTTCCACCGCACCGCCGAGATACCACCACCAGAGCAGGTTAAAGAGGATATGCATCAGCGAGAAGTGCATTAACGCGTGGGTGAAGTAACGCCAGAACTc                           <  5:317231‑M1/124‑1 (MQ=255)
                                                                                                                           tttccccgcttattcgcaccttccTTAGCTTACCGCTACCGAGGCGTTTTTCCACCGCACCGCCGAGATACCACCACCAGAGCAGGTTAAAGAGGATATGCATCAGCGAGAAGTGCATTAACGCGTGGGTGAAGTAACGCCAGAACTCa                          >  2:209187‑M1/25‑149 (MQ=255)
                                                                                                                              gcccgcttattcgcaccttccTTAGCTTACCGCTACCGTGGCGTTTTTCCACCTCACCGCCGAGATACCACCACCAGAGCAGGTTAAAGATGATATGCATCAGCGAGAAGTGCATTAACGCGTGGGTGAAGTAACGCCAGAACTCaaa                        >  8:328375‑M1/22‑148 (MQ=255)
                                                                                                                                ccgcttattcgcaccttccTTAGCTTACCGCTACCGAGGCGTTTTTCCACCGCACCGCCGAGATACCACCACCAGAGCAGGTTAAAGAGGATATGCATCAGCGAGAAGTGCATTAACGCGTGGGTGAAGTAACGCCAGAACTCAAAttt                     <  3:249015‑M1/130‑1 (MQ=255)
                                                                                                                                    tAAGCGTAATGACAATTAGtgaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtcagaccagaa                  >  7:133766‑M1/1‑19 (MQ=255)
                                                                                                                                       ttcgcaccttccTTAGCTTAACGCTACCGAGGCGTTTTTCCACCGCACCGCCGAGATACCACCACCAGAGCAGGTTAAAGAGGATATGCATCAGCGAGAAGTGCATTAACGCGTGGGTGAAGTAACGCCAGAACTCAAATTTCAGTGtt              <  1:32947‑M1/137‑1 (MQ=255)
                                                                                                                                         cgcaccttccTTAGCTTACCGCTACGGAGGCGTTTTTCCACCGGCCCGCCGAGATTCCACCACCAGAGCAGGTTAAAGAGGATATGCATCAGCGAGAAGTGCATTAACGCGTGGGTGTAGTAACGCCAGAACTCAAATTTCAGTGTTg             >  5:92741‑M1/11‑148 (MQ=255)
                                                                                                                                          gcaccttccTTAGCTTACCGCTACCGAGGCGTTTTTCCACCGCACCGCCGAGATACCACCACCAGAGCAGGTTAAAGAGGATATGCATCAGCGAGAAGTGCATTAACGCGTGGGTGAAGTAACGc                                   >  1:185963‑M1/10‑125 (MQ=255)
                                                                                                                                          gcaccttccTTAGCTTACCGCTACCGAGGCGTTTTTCCACCGCACCGCCGAGATACCACCACCAGAGCAGGTTAAAGAGGATATGCATCAGCGAGAAGTGCATTAACGCGTGGGTGAAGTAACGc                                   <  2:185963‑M1/116‑1 (MQ=255)
                                                                                                                                          gcaccttccTTAGCTTACCGCTACCGAGGCGTTTTTCCACCGCACCGCCGAGATACCACCACCAGAGCAGGTTAAAGAGGATATGCATCAGCGAGAAGTGCATTAACGCGTGGGTGAAGTAACGCCAGAACTCAAATTTCAGTGTTGGa           <  2:182780‑M1/140‑1 (MQ=255)
                                                                                                                                           aaTGACAATTAGggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtcagaccagaaaagagatt          >  4:118355‑M1/1‑12 (MQ=255)
                                                                                                                                            accttccTTAGCTTACCGCTACCGAGGCGTTTTTCCACCGCACCGCCGAGATACCACCACCAGAGCAGGTTAAAGAGGATATGCATCAGCGAGAAGTGCATTAACGCGTGGGTGAAGTAACGCCAGAACTCAAATTTCAGTGTTGGATc         >  6:317231‑M1/8‑149 (MQ=255)
                                                                                                                                             tGACAATTAGggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtcagaccagaaaagagatttt        >  1:211836‑M1/1‑10 (MQ=255)
                                                                                                                                              cttccTTAGCTTACCGCTACCGAGGCGTTTTTCCACCGCACCGCCGAGATACCACCACCAGAGCAGGTTAAAGAGGATATGCATCAGCGAGAAGTGCATTAACGCGTGGGTGAAGTAACGCCAGAACTCAAATTTCAGTGTTGGATCg        <  3:289495‑M1/143‑1 (MQ=255)
                                                                                                                                                 aaTTAGggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtcagaccagaaaagagattttcttg    >  8:86542‑M1/1‑6 (MQ=255)
                                                                                                                                                 aaTTAGggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtcagaccagaaaagagattttctt     <  2:125906‑M1/148‑143 (MQ=255)
                                                                                                                                                  cTTAGCTTACCGCTACCGAGGCGTTTTTCCACCGCACCGCCGAGATACCACCACCAGAGCAGGTTAAAGAGGATATGCATCAGCGAGAAGTGCATTAACGCGTGGGTGAAGTAACGCCAGAACTCAAATTTCAGTGTTGGATCGAATgg   <  3:235871‑M1/148‑1 (MQ=255)
                                                                                                                                                   ttAGggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtcagaccagaaaagagattttcttgtc  <  8:133766‑M1/149‑146 (MQ=255)
                                                                                                                                                   |                                                                                                                                                    
AAATGCCACTTTGCGGATCGCGTTCGCCACGTAGCCAGACGTAGCCCATCAGCGCATACACCACGCCAGAAAGCCCGCCAAACCACGGCCCGCTGAATTTTTGCTGCACATAGCCGCTTAACAGGGCGCTGATAAGCGTAATGACAATTAGCTTACCGCTACCGAGGCGTTTTTCCACCGCACCGCCGAGATACCACCACCAGAGCAGGTTAAAGAGGATATGCATCAGCGAGAAGTGCATTAACGCGTGGGTGAAGTAACGCCAGAACTCAAATTTCAGTGTTGGATCGAATGGC  >  NC_000913/3560783‑3561078

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.