New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 4200145 =78 (0.950)4 (0.050) 3/242 NT 5.2% intergenic (+51/‑136) yjaG/hupA DUF416 domain protein/HU, DNA‑binding transcriptional regulator, alpha subunit
?NC_000913 4200182 = 75 (0.990)intergenic (+88/‑99) yjaG/hupA DUF416 domain protein/HU, DNA‑binding transcriptional regulator, alpha subunit

Only 100 of 107 total aligned reads displayed.

CTGAGTGCGAAGAACGCGATATCGAGCTGATAAAAGGCCTTAGGGCAGACCTGCGTGAGGCGGGTGAGAGCAATATTGGTATAATTTTTCAGCAATAAGACCAGAAAACGTGATTTAACGCCTGATTTGTCGTACCTGGAGTCTTCCCTTTCGCCCCCCGTCTGGTCTACATTTGGGGGGCGAAAAAAAGTGGCTATCGGTGCGTGTATGCAGGAGAGTGCTATTCTGGCATTTCCGTCGCACTCGATGCTTAGCAAGCGATAAACACATTGTAAGGATAACTTATGAACAAGACT  >  NC_000913/4199997‑4200292
                                                                                                                                                    |                                                                                                                                                   
acagttctgctttctctgcaattacatcaatcagttgagtcttgttcataagttatccttacaatgtgtttatcgcttgctaagcatcgagtgcgacggaaatgccagaatagcactctcctgcatacacgcaccgatagccacttttt                                                                                                                                                     >  5:332446‑M1/149‑149 (MQ=255)
 cagttctgctttctctgcaattacatcaatcagttgagtcttgttcataagttatccttacaatgtgtttatcgcttgctaagcatcgagtgcgacggaaatgccagaatagcactctcctgcatacacgcaccgatagccactttttt                                                                                                                                                    >  8:70106‑M1/148‑149 (MQ=255)
   gttctgctttctctgcaattacatcaatcagttgagtcttgttcataagttatccttacaatgtgtttatcgcttgctaagcatcgagtgcgacggaaatgccagaatagcactctcctgcatacacgcaccgatagccacttttTTTc                                                                                                                                                  <  1:149834‑M1/4‑1 (MQ=255)
   aGTGCGAAGAACGCGATATCGAGCTGATAAAAGGCCTTAGGGCAGACCTGCGTGAGGCGGGTGAGAGCAATATTGGTATAATTTTTCAGCAATAAGACCAGAAAACGTGATTTAACGCCTGATTTGTCGTACCTGGAGTCTTCCCTTTc                                                                                                                                                  <  7:219921/149‑1 (MQ=255)
    atctgctttctctgcaattacatcaatcagttgagtcttgttcataagttatccttacaatgtgtttatcgcttgctaagcatcgagtgcgacggaaatgccagaatagcactctcctgcatacacgcaccgatagccacttttTTTCg                                                                                                                                                 <  5:248600‑M1/5‑1 (MQ=255)
       tgctttctctgcaattacatcaatcagttgagtcttgttcataagttatccttacaatgtgtttatcgcttgctaagcatcgagtgcgacggaaatgccagaatagcactctcctgcatacacgcaccgatagccacttttTTTCGccc                                                                                                                                              <  2:65124‑M1/8‑1 (MQ=255)
       tgctttctctgcaattacatcaatcagttgagtcttgttcataagttatccttacaatgtgtttatcgcttgctaagcatcgagtgcgacggaaatgccagaatagcactctcctgcatacacgcaccgatagccacttttTTTCGccc                                                                                                                                              <  6:3732‑M1/8‑1 (MQ=255)
         ctttctcttcaattacatcaatccgttgcgtcttggtcataagttctccttacaatgtgtttatcgcttgctaagcatcgagtgcgacggaaaagccagaatagcactctcctgcatacccgcaccgatagccacttttTTTCGccc                                                                                                                                              >  5:49467‑M1/140‑147 (MQ=255)
         ctttctctgcaattacatcaatcagttgagtcttgttcataagttatccttacaatgtgtttatcgcttgctaagcatcgagtgcgacggaaatgccagaatagcactctcctgcatacacgcaccgatagccacttttTTTCGccccc                                                                                                                                            <  7:199410‑M1/10‑1 (MQ=255)
         ctttctctgcaattacatcaatcagttgagtcttgttcataagttatccttacaatgtgtttatcgcttgctaagcatcgagtgcgacggaaatgccagaatagcactctcctgcatacacgcaccgatagccacttttTTTCGccccc                                                                                                                                            <  4:322643‑M1/10‑1 (MQ=255)
         ctttctctgcaattacatcaatcagttgagtcttgttcataagttatccttacaatgtgtttatcgcttgctaagcatcgagtgcgacggaaatgccagaatagcactctcctgcatacacgcaccgatagccacttttTTTCGccc                                                                                                                                              >  8:35950‑M1/140‑147 (MQ=255)
         ctttctctgcaattacatcaatcagttgagtcttgttcataagttatccttacaatgtgtttatcgcttgctaagcatcgagtgcgacggaaatgccagaatagcactctcctgcatacacgcaccgatagccacttttTTTCGccc                                                                                                                                              >  4:78131‑M1/140‑147 (MQ=255)
         ctttctctgcaattacatcaatcagttgaggcttgttcataagttatccatacaatgtgtttatcgcttgctaagcatcgagtgcgacggaaatgccagaatagcactctcctgcatacacgcaccgatagccacttttTTTCGccc                                                                                                                                              >  7:190997‑M1/140‑147 (MQ=255)
            aaCGCGATATCGAGCTGATAAAAGGCCTTAGGGCAGACCTGCGTGAGGCGGGTGAGAGCAATATTGGTATAATTTTTCAGCAATAAGACCAGAAAACGTGATTTAACGCCTGATTTGTCGTACCTGGAGTCTTCCCTTTCGCCCCCCGt                                                                                                                                         <  7:238450/149‑1 (MQ=255)
            aaCGCGATATCGAACTGATAAAAGGCCTTAGGGCAGACCTGCGTGAGGCGGGTGAGAGCAATATTGGTATAATTTTTCAGCAATAAGACCAGAAAACGTGATTTAACGCCTGATTTGTCGTACCTGGAGTCTTCCCTTTCGCCCCCCGt                                                                                                                                         <  5:95204/149‑1 (MQ=255)
             aCGCGATATCGAGCTGATAAAAGGCCTTAGGGCAGACCTGCGTGAGGCGGGTGAGAGCAATATTGGTATAATTTTTCAGCAATAAGACCAGAAAACGTGATTTAACGCCTGATTTGTCTTACCTGGAGTCTTCCCTTTCGCCCCCCGTc                                                                                                                                        <  6:41167/149‑1 (MQ=255)
               gcgATATCGAGCTGATAAAAGGCCTTAGGGCAGACCTGCGTGAGGCGGGTGAGAGCAATATTGGTATAATTTTTCAGCAATAAGACCAGAAAACGTGATTTAACGCCTGATTTGTCGTACCTGGAGTCTTCCCTTTCGCCCCCCGTCTg                                                                                                                                      >  5:3732/1‑149 (MQ=255)
                  atatCGAGCTGATAAAAGGCCTTAGGGCAGACCTGCGTGAGGCGGGTGAGAGCAATATTGGTATAATTTTTCAGCAATAAGACCAGAAAACGTGATTTAACGCCTGATTTGTCGTACCTGGAGTCTTCCCTTTCGCCCCCCGTCTGGTc                                                                                                                                   >  4:175262/1‑149 (MQ=255)
                     tCGAGCTGATAAAAGGCCTTAGGGCAGACCTGCGTGAGGCGGGTGAGAGCAATATTGGTATAATTTTTCAGCAATAAGACCAGAAAACGTGATTTAACGCCTGATTTGTCGTGCCTGGAGTCTTCCCTTTCGCCCCCCGTCTGGTCTa                                                                                                                                 >  8:145887/1‑148 (MQ=255)
                     tCGAGCTGATAAAAGGCCTTAGGGCAGACCTGCGTGAGGCGGGTGAGAGCAATATTGGTATAATTTTTCAGCAATAAGACCAGAAAACGTGATTTAACGCCTGATTTGTCGTACCTGGAGTCTTCCCTTTCGCCCCCCGTCTGGTCTa                                                                                                                                 >  8:193696/1‑148 (MQ=255)
                     tCGAACTGATTAAAGTCCTTAGGTCAGACCGTCGTGAGGAGTGTGAGAGATATTTTGGTATAATTTTTCAGCAATAATACCATAAAACGTGATTTAACGCCTGATTTGTCGTACCTTGATTCTTCCCTTTAGCCGCCATTATGGTCTa                                                                                                                                 <  2:238984/148‑1 (MQ=255)
                        aGCTGATAAAAGGCCTTAGGGCAGACCTGCGTGAGGCGGGTGAGAGCAATATTGGTATAATTTTTCAGCAATAAGACCAGAAAACGTGATTTAACGCCTGATTTGTCGTACCTGGAGTCTTCCCTTTCGCCCCCCGTCTGGTCTACAtt                                                                                                                             >  2:155613/1‑149 (MQ=255)
                           tGATAAAAGGCCTTAGGGCAGACCTGCGTGAGGCGGGTGAGAGCAATATTGGTATAATTTTTCAGCAATAAGACCAGAAAACGTGATTTAACGCCTGATTTGTCGTACCTGGAGTCTTCCCTTTCGCCCCCCGTCTGGTCTACATTTgg                                                                                                                          >  2:347203/1‑149 (MQ=255)
                             aTAAAAGGCCTTAGGGCAGACCTGCGTGAGGCGGGTGAGAGCAATATTGGTATAATTTTTCAGCAATAAGACCAGAAAACGTGATTTAACGCCTGATTTGTCGTACCTGGAGTCTTCCCTTTCGCCCCCCGTCTGGTCTACATTTgggg                                                                                                                        >  6:249862/1‑149 (MQ=255)
                             aTAAAAGGCCTTAGGGCAGACCTGCGTGAGGCGGGTGAGAGCAATATTGGTATAATTTTTCAGCAATAAGACCAGAAAACGTGATTTAACGCCTGATTTGTCGTACCTGGAGTCTTCCCTTTCGCCCCCCGTCTGGTCTACATTTggg                                                                                                                         <  3:174403/148‑1 (MQ=255)
                                      cTTAGGGCAGACCTGCGTGAGGCGGGTGAGAGCAATATTGGTATAATTTTTCAGCAATAAGACCAGAAAACGTGATTTAACGCCTGATTTGTCGTACCTGGAGTCTTCCCTTTCGCCCCCCGTCTGGTCTACATTTGGGGGGCGaaaa                                                                                                                >  7:296733/1‑148 (MQ=255)
                                      cTTAGGGCAGACCTGCGTGAGGCGGGTGAGAGCAATATTGGTATAATTTTTCAGCAATAAGACCAGAAAACGTGATTTAACGCCTGATTTGTCGTACCTGGAGTCTTCCCTTTCGCCCCCCGTCTGGTCTACATTTGGGGGGCGaaaa                                                                                                                >  1:176036/1‑148 (MQ=255)
                                       gtAGGGCAGACCTGCGTGAGGCGGGTGAGAGCATTATTGGTATAATTTTTCAGCAAGAAGACCAGAAAACGTGAGTGAACGCCTGAGTTGTCGGACCTGGAGTCTTCCCTTTCGCCGCCCGTCTGGTCTACATTTGGGGGGCGaaaaa                                                                                                               >  6:248600/2‑148 (MQ=255)
                                         aGGGCAGACCTGCGTGAGGCGGGTGAGAGCAATATTGGTATAATTTTTCAGCAATAAGACCAGAAAACGTGATTTAACGCCTGATTTGTCGTACCTGGAGTCTTCCCTTTCGCCCCCCGTCTGGTCTACATTTGGGGGGCGaaaaaa                                                                                                              <  7:174186/147‑1 (MQ=255)
                                           gctcataagttatccttacaatgtggttatcgcttgctaagcatcgagtgcgacggaaatgccagaatagcactctcctgcatacacgcaccgatagccacttttTTTCGCCCCCCGTCTGGTCTACATTTGGGGGGCGaaaaaaa                                                                                                             >  3:306003‑M1/106‑146 (MQ=255)
                                            ttcataagttatccttacaatgtgtttatcgcttgctaagcatcgagtgcgacggaaatgccagaatagcactctcctgcatacacgcaccgatagccacttttTTTCGCCCCCCGTCTGGTCTACATTTGGGGGGCGAAAAAAAGTg                                                                                                          >  6:50607‑M1/105‑148 (MQ=255)
                                            gCAGACCTGCGTGAGGCGGGTGAGAGCAATATTGGTATAATTTTTCAGCAATAAGACCAGAAAACGTGATTTAACGCCTGATTTGTCGTACCTGGAGTCTTCCCTTTCGCCCCCCGTCTGGTCTACATTTGGGGGGCGAAAAAAAGTgg                                                                                                         <  3:175262/149‑1 (MQ=255)
                                            gCAGACCTGCGTGAGGCGGGTGAGAGCAATATTGGTATAATTTTTCAGCAATAAGACCAGAAAACGTGATTTAACGCCTGATTTGTCGTACCTGGAGTCTTCCCTTTCGCCCCCCGTCTGGTCTACATTTGGGGGGCGAAAAAAAGTgg                                                                                                         <  8:115172/149‑1 (MQ=255)
                                            gCAGACATGCGTGAGGCGTGTGAGAGCAATATTTGTATAATTTTTCAGCAATAATACAAGAAAACGTGATTTAAAGACTGATTTTTCGTACATGGAGTCTTCCCTTTCGCCCCCCGTCTGGTATACATTTGGGGTGCGAAAAAAAGTgg                                                                                                         >  8:141343/1‑149 (MQ=255)
                                                aCCTGCGTGAGGCGGGTGAGAGCAATATTGGTATAATTTTTCAGCAATAAGACCAGAAAACGTGATTTAACGCCTGATTTGTCGTACCTGGAGTCTTCCCTTTCGCCCCCCGTCTGGTCTACATTTGGGGGGCGAAAAAAAGTGGCTAt                                                                                                     >  1:29260/1‑149 (MQ=255)
                                                  cTGCGTGAGTCGGGTGAGATCAATAATGGTATAATTTTTAATCAATAATACTAGAAAACGTGATTTAACGCCTGATTTGTCGTTCCTGGAGTCTTCCCTTTCGCCCCCCGTCTGGTCTACATTTGGGGGGCGAAAAAAAGTGGCTATCg                                                                                                   <  6:265778/149‑1 (MQ=255)
                                                  cTGCGTGAGGCGGGTGAGAGCAATATTGGTATAATTTTTCAGCAATAAGACCAGAAAACGGGATTTAACGCCTGATTTGTCGTACCTGGAGTCTTCCCTTTCGCCCCCCGTCTGGTCTACATTTGGGGGGCGAAAAAAAGTGGCTATCg                                                                                                   <  1:86689/149‑1 (MQ=255)
                                                    gCGTGAGGCGGGTGAGAGCAATATTGGTATAATTTTTCAGCAATAAGACCAGAAAACGTGATTTAACGCCTGATTTGTCGTACCTGGAGTCTTCCCTTTCGCCCCCCGTCTGGTCTACATTTGGGGGGCGAAAAAAAGTGGCTATCGGt                                                                                                 >  7:11741/1‑149 (MQ=255)
                                                      gTGAGGCGGGTGAGAGCAATATTGGTATAATTTTTCAGCAATAAGACCAGAAAACGTGATTTAACGCCTGATTTGTCGTACCTGGAGTCTTCCCTTTCGCCCCCCGTCTGGTCTACATTTGGGGGGCGAAAAAAAGTGGCTATCGGTGc                                                                                               <  1:347203/149‑1 (MQ=255)
                                                      gTGAGGCGGGTGAGAGCAATATTGGTATAATTTTTCAGCAATAAGACCAGAAAACGTGATTTAACGCCTGATTTGTCGTACCTGGAGTCTTCCCTTTCGCCCCCCGTCTGGTCTACATTTGGGGGGCGAAAAAAAGTGGCTATCGGTGc                                                                                               <  1:155613/149‑1 (MQ=255)
                                                          ttacaatgtgtttatcgcttgctaagcatcgagtgcgacggaaatgccagaatagcactctcctgcatacacgcaccgatagccacttttTTTCGCCCCCCGTCTGGTCTACATTTGGGGGGCGaaaaaaa                                                                                                             <  8:139667‑M1/41‑1 (MQ=255)
                                                          ttacaatgtgtttatcgcttgctaagcatcgagtgcgacggaaatgccagaatagcactctcctgcatacacgcaccgatagccacttttTTTCGCCCCCCGTCTGGTCTACATTTGGGGGGCGaaaaaaa                                                                                                             >  7:139667‑M1/91‑131 (MQ=255)
                                                           gCGGGTGAGAGCAATATTGGTATAATTTTTCAGCAATAAGACCAGAAAACGTGATTTAACGCCTGATTTGTCGTACCTGGAGTCTTCCCTTTCGCCCCCCGTCTGGTCTACATTTGGGGGGCGAAAAAAAGTGGCTATCGGTGCGTGTa                                                                                          <  5:270262/149‑1 (MQ=255)
                                                              ggTGAGAGCAATATTGGTATAATTTTTCAGCAATAAGACCAGAAAACGTGATTTAACGCCTGATTTGTCGTACCTGGAGTCTTCCCTTTCGCCCCCCGTCTGGTCTACATTTGGGGGGCGAAAAAAAGTGGCTATCGGTGCGTGTATGc                                                                                       <  2:29260/149‑1 (MQ=255)
                                                                    agCAATATTGGTATAATTTTTCAGCAATAAGACCAGAAAACGTGATTTAACGCCTGATTTGTCGTGCCTGGAGTCTTCCCTTTCGCCCCCCGTCTGGTCTACATTTGGGGGGCGAAAAAAAGTGGCTATCGGTGCGTGTATGCAGgaga                                                                                 <  7:145887/149‑1 (MQ=255)
                                                                    agCAATATTGGTATAATTTTTCAGCAATAAGACCAGAAAACGTGATTTAACGCCTGATTTGTCGTACCTGGAGTCTTCCCTTTCGCCCCCCGTCTGGTCTACATTTGGGGGGCGAAAAAAAGTGGCTATCGGTGCGTGTATGCAGgaga                                                                                 <  7:110905/149‑1 (MQ=255)
                                                                     gCAATATTGGTATAATTTTTCAGCAATAAGACCAGAAAACGTGATTTAACGCCTGATTTGACGTACCTGGAGTCTTCCCTTTCGCCCCCCGTCTGGTCTACATTTGGGGGGCGAAATAAAGTGGCTATCGGTGCTTGTATGCAGgaga                                                                                 <  1:270281/148‑1 (MQ=255)
                                                                        atatTGGTATAATTTTTCAGCAATAAGACCAGAAAACGTGATTTAACGCCTGATTTGTCGTACCTGGAGTCTTCCCTTTCGCCCCCCGTCTGGTCTACATTTGGGGGGCGAAAAAAAGTGGCTATCGGTGCGTGTATGCAGGAGAGTGc                                                                             >  6:133123/1‑149 (MQ=255)
                                                                        atatTGGTATAATTTTTCAGCAATAAGACCAGAAAACGTGATTTAACGCCTGATTTGTCGTACCTGGAGACTTCCCTTTCGCCCACAGTCTGGACTACATTTGGGGGGAGAAAAAAAGTGGCTAACGTTGCGAGTATGCAGGATAGTGc                                                                             >  4:70410/1‑149 (MQ=255)
                                                                         tatTGGTATAATTTTTCAGCAATAAGACCAGAAAACGTGATTTAACGCGTGATTTGTCGTACCTGTAGTCATCCCTTTCGCCCCCCATCTGGTCTACATTTTGGGGGCGAAAAAAAGTGTCTATCGGTGCGTGTATGCAGTAGAGTGc                                                                             >  5:48269/1‑148 (MQ=255)
                                                                         tatTGGTATAATTTTTCAGCAATAAGACCAGAAAACGTGATTTAACGCCTGATTTGTCGTACCTGGAGTCTTCCCTTTCGCCCCCCGTCTGGTCTACATTTGGGGGGCGAAAAAAAGTGGCTATCGGTGCGTGTATGCAGGAGAGTGc                                                                             >  2:137537/1‑148 (MQ=255)
                                                                         tatTGGTATAATTTTTCAGCAATAAGACCAGAAAACGTGATTTAACGCCTGATTTGTCGTACCTGGAGTCTTCCCTTTCGCCCCCCGTCTGGTCTACATTTGGGGGGCGAAAAAAAGTGGCTATCGGTGCGTGTATGCAGGAGAGTGc                                                                             >  4:136665/1‑148 (MQ=255)
                                                                          atTGGTATAATTTTTCAGCAATAAGACCAGAAAACGTGATTTAACGCCTGATTTGTCGTACCTGGAGTCTTCCCTTTCGCCCCCCGTCTGGTCTACATTTGGGGGGCGAAAAAAAGt                                                                                                           <  1:306603/117‑1 (MQ=255)
                                                                          atTGGTATAATTTTTCAGCAATAAGACCAGAAAACGTGATTTAACGCCTGATTTGTCGTACCTGGAGTCTTCCCTTTCGCCCCCCGTCTGGTCTACATTTGGGGGGCGAAAAAAAGt                                                                                                           >  2:306603/1‑117 (MQ=255)
                                                                               tataATTTTTCAGCAATAAGACCAGAAAACGTGATTTAACGCCTGATTTGTCGTACCTGGAGTCTTCCCTTTCGCCCCCCGTCTGGTCTACATTTGGGGGGCGAAAAAAAGTGGCTATCGGTGCGTGTATGCAGGAGAGTGCTATTCTg                                                                      >  3:322643/1‑149 (MQ=255)
                                                                                 taATTTTTCAGCAATAAGACCAGAAACCGTGATTTAACGCCTGATTTGTCGTACCTGGAGTCTTCCCTTTCGCCCCCCGTCTGGTCTACATTTGGGGGGCGAAAAAAAGTGGCTATCGGTGCGTGTATGCAGGAGAGTGCTATTCTGGc                                                                    <  4:309262/149‑1 (MQ=255)
                                                                                 taATTTTTCAGCAATAAGACCAGAAAACGTGATTTAACGCCTGATTTGTCGTACCTGGAGTCTTCCCTTTCGCCCCCCGTCTGGTCTACATTTGGGGGGGGAAAAAAAGTGGCTATCGGTGCGTGTATGCAGGAGAGTGCTATTCTGGc                                                                    <  7:193696/149‑1 (MQ=255)
                                                                                         cAGCAATAAGACCAGAAAACGTGATTTAACGCCTGATTTGGCGTACCTGGAGTCGTCCCTTTCGCCCCCCGTCTGGGATACATTTGGGGGGCGAAAAAAAGTGGCTATCGGTGCGTGTATGCAGGAGAGTGCTATTCTGGCATTTCCg                                                             <  3:137296/148‑1 (MQ=255)
                                                                                          aGCAATAAGACCAGAAAACGTGATTTAACGCCTGATTTGTCGTACCTGGAGTCTTCCCTTTCGCCCCCCGTCTGGTCTACATTTGGGGGGCGAAAAAAAGTGGCTATCGGTGCGTGTATGCAGGAGAGTGCTATTCTGGCATTTCCGTc                                                           <  5:273329/149‑1 (MQ=255)
                                                                                               tAAGACCAGAAAACGTGATTTAACGCCTGATTTGTCGTACCTGGAGTCTTCCCTTTCGCCCCCCGTCTGGTCTACATTTGGGGGGCGAAAAAAAGTGGCTATCGGTGCGTGTATGCAGGAGAGTGCTATTCTGGCATTTCCGTCGCACt                                                      >  4:31185/1‑149 (MQ=255)
                                                                                                 aGACCAGAAAACGTGATTTAACGCCTGATTTGTCGTACCTGGAGTCTTCCCTTTCGCCCCCCGTCTGGTCTACATTTGGGGGGCGAAAAAAAGTGGCTATCGGTGCGTGTATGCAGGAGAGTGCTATTCTGGCATTTCCGTCGCACTc                                                     >  6:236098/1‑148 (MQ=255)
                                                                                                  gACCAGAAAACGTGATTTAACGCCTGATTTGTCGTACCTGGAGTCTTCCCTTTCGCCCCCCGTCTGGTCTACATTTGGGGGGCGAAAAAAAGTGGCTATCGGTGCGTGTATGCAGGAGAGTGCTATTCTGGCATTTCCGTCGCACTCGa                                                   <  8:34456/149‑1 (MQ=255)
                                                                                                  gACCAGAAAACGTGATTTAACGCCTGATTTGTCGTACCTGGAGTCTTCCCTTTCGCCCCCCGTCTGGTCTACATTTGGGGGGCGAAAAAAAGTGGCTATCGGTGCGTGTATGCAGGAGAGTGCTATTCTGGCATTTCCGTCGCACTCGa                                                   >  8:199410/1‑149 (MQ=255)
                                                                                                  gACCAGAAAACGTGATTTAACGCCTGATTTGTCGTACCTGGAGTCTTCCCTTTCGCCCCCCGTCTGGTCTACATTTGGGGGGCGAAAAAAAGTGGCTATCGGTGCGTGTATGCAGGAGAGTGCTATTCTGGCATTTCCGTCGCACTCGa                                                   >  3:222857/1‑149 (MQ=255)
                                                                                                      aGAAAACGTGATTTAACGCCTGATTTGTCGTACCTGGAGTCTTCCCTTTCGCCCCCCGTCTGGTCTACATTTGGGGGGCGAAAAAAAGTGGCTATCGGTGCGTGTATGCAGGAGAGTGCTATTCTGGCATTTCCGTCGCACTCGATGc                                                >  1:323375/1‑148 (MQ=255)
                                                                                                      aGAAAACGTGATTTAACGCCTGATTTGTCGTACCTGGAGTCTTCCCTTTCGCCCCCCGTCTGGTCTACATTTGGGGGGCGAAAAAAAGTGGCTATCGGTGCGTGTATGCAGGAGAGTGCTATTCTGGCATTTCCGTCGCACTCGATGc                                                <  2:323375/148‑1 (MQ=255)
                                                                                                      aGAAAACGTGATTTAACGCCTGATTTGTCGTACCTGGAGTCTTCCCTTTCGCCCCCCGTCTGGTCTACATTTGGGGGGCGAAAAAAAGTGGCTATCGGTGCGTGTATGCAGGAGAGTGCTATTCTGGCATTTCCGTCGCACTCGATGCt                                               >  6:42049/1‑149 (MQ=255)
                                                                                                             gTGATTTAACGCCTGATTTGTCGTACCTGGAGTCTTCCCTTTCGCCCCCCGTCTGGTCTACATTTGGGGGGCGAAAAAAAGTGGCTATCGGTGCGTGTATGCAGGAGAGTGCTATTCTGGCATTTCCGTCGCACTCGATGCTTAGCAAg                                        >  1:65124/1‑149 (MQ=255)
                                                                                                              tGATTTAACGCCTGATTTGTCGTACCTGGAGTCTTCCCTTTCGCCCCCCGTCTGGTCTACATTTGGGGGGCGAAAAAAAGTGGCTATCGGTGCGTGTATGCAGGAGAGTGCTATTCTGGCATTTCCGTCGCACTCGATGCTTAGCAAGc                                       <  5:212396/149‑1 (MQ=255)
                                                                                                                 tttAACGCCTGATTTGTCGTACCTGGAGTCTTCCCTTTCGCCCCCCGTCTGGTCTACATTTGGGGGGCGAAAAAAAGTGGCTATCGGTGCGTGTATGCAGGAGAGTGCTATTCTGGCATTTCCGTCGCACTCGATGCTTAGCAAGCGAt                                    <  2:354467/149‑1 (MQ=255)
                                                                                                                    aaCGCCTGATTTGTCGTACCTGGAGTCTTCCCTTTCGCCCCCCGTCTGGTCTACATTTGGGGGGCGAAAAAAAGTGGCTATCGGTGCGTGTATGCAGGAGAGTGCTATTCTGGCATTTCCGTCg                                                          <  8:308990/124‑1 (MQ=255)
                                                                                                                    aaCGCCTGATTTGTCGTACCTGGAGTCTTCCCTTTCGCCCCCCGTCTGGTCTACATTTGGGGGGCGAAAAAAAGTGGCTATCGGTGCGTGTATGCAGGAGAGTGCTATTCTGGCATTTCCGTCg                                                          >  7:308990/1‑124 (MQ=255)
                                                                                                                     aCGCCTGATTTGTCGTACCTGGAGTCTTCCCTTTCGCCCCCCGTCTGGTCTACATTTGGGGGGCGAAAAAAAGTGGCTATCGGTGCGTGTATGCAGGAGAGTGCTATTCTGGCATTTCCGTCGCACTCGATGCTTAGCAAGCGATaaa                                 <  1:137537/148‑1 (MQ=255)
                                                                                                                     aCGCCTGATTTGTCGTACCTGGAGTCTTCCCTTTCGCCCCCCGTCTGGTCTACATTTGGGGGGCGAAAAAAAGTGGCTATCGGTGCGTGTATGCAGGAGAGTGCTATTCTGGCATTTCCGTCGCACTCGATGCTTAGCAAGCGATaaa                                 >  4:163835/1‑148 (MQ=255)
                                                                                                                       gCCTGATTTGTCGTACCTGGAGTCTTCCCTTTCGCCACCCGTCTGGTCTACATTTGGGGGGCGAAAAAAAGTGGCTATCGGTGCGTGTATGCAGGAGAGTGCAATTCTGGCAGTTCCGTCGCACTAGATGCTTAGCAAGCGATAAaca                               >  4:289284/1‑148 (MQ=255)
                                                                                                                        ccTGATTTGTCGTACCTGGAGTCTTCCCTTTCGCCCCCCGTCTGGTCTACATTTGGGGGGCGAAAAAAAGTGGCTATCGGTGCGTGTATGCAGGAGAGTGCTATTCTGGCATTTCCGTCGCACTCGATGCTTAGCAAGCGATAAAcaca                             <  8:11741/149‑1 (MQ=255)
                                                                                                                         cTGATTTGTCGTACCTGGAGTCTTCCCTTTCGCCCCCCGTCTGGTCTACATTTGGGGGGCGAAAAAAAGTGGCTATCGGTGCGTGTATGCAGGAGAGTGCTATTTTGGCATTTCCGTCGCACTCGATGCTTAGCAAGCGATAAACACAt                            <  7:334055/149‑1 (MQ=255)
                                                                                                                          tGATTTGTCGTACCTGGAGTCTTCCCTTTCGCCCCCCGTCTGGTCTACATTTGGGGGGCGAAAAAAAGTGGCTATCGGTGCGTGTATGCAGGAGAGTGCTATTCTGGCATTTCCGTCGCACTCGATGCTTAGCAAGCGATAAACACAtt                           >  5:151038/1‑149 (MQ=255)
                                                                                                                           gATTTGTCGTACCTGGAGTCTTCCCTTTCGCCCCCCGTCTGGTCTACATTTGGGGGGCGAAAAAAAGTGGCTATCGGTGCGTGTATGCAGGAGAGTGCTATTCTGGCATTTCCGTCGCACTCGATGCTTAGCAAGCGATAAACACATTg                          >  6:40676/1‑149 (MQ=255)
                                                                                                                            aTTTGTCGTACCTGGAGTCTTCCCTTTCGCCCCCCGTCTGGTCTACATTTGGGGGGCGAAAAAAAGTGGCTATCGGTGCGTGTATGCAGGAGAGTGCTATTCTGGCATTTCCGTCGCACTCGATGCTTAGCAAGCGATAAACACATTg                          >  2:285230/1‑148 (MQ=255)
                                                                                                                                      ccTGGAGTCTTCCCTTTCGCCCCCCGTCTGGTCTACATTTGGGGGGCGAAAAAAAGTGGCTATCGGTGCGTGTATGCAGGAGAGTGCTATTCTGGCATTTCCGTCGCACTCGATGCTTAGCAAGCGATAAACACATTGTAAGGATAAc                <  8:24051/148‑1 (MQ=255)
                                                                                                                                       cTGGAGTCTTCCCTTTCGCCCCCCGTCTGGTCTACATTTGGGGGGCGAAAAAAAGTGGCTATCGGTGCGTGTATGCAGGAGAGTGCTATTCTGGCATTTCCGTCGCACTCGATGCTTAGCAAGCGATAAACACATTGTAAGGATAACt               >  6:181831/1‑148 (MQ=255)
                                                                                                                                         ggAGTCTTCCCTTTCGCCCCCCGTCTGGTCTACATTTGGGGGGCGAAAAAAAGTGGCTATCGGTGCGTGTATGCAGGAGAGTGCTATTCTGGCATTTCCGTCGCACTCGATGCTTAGCAAGCGATAAACACATTGTAAg                      <  1:228792/139‑1 (MQ=255)
                                                                                                                                         ggAGTCTTCCCTTTCGCCCCCCGTCTGGTCTACATTTGGGGGGCGAAAAAAAGTGGCTATCGGTGCGTGTATGCAGGAGAGTGCTATTCTGGCATTTCCGTCGCACTCGATGCTTAGCAAGCGATAAACACATTGTAAg                      >  2:228792/1‑139 (MQ=255)
                                                                                                                                         ggAGTCTTCCCTTTCGCCCCCCGTCTGGTCTACATTTGGGGGGCGAAAAAAAGTGGCTATCGGTGCGTGTATGCAGGAGAGTGCTATTCTGGCATTTCCGTCGCACTCGATGCTTAGCAAGCGATAAACACATTGTAAGGATAACTTAt            >  2:120121/1‑149 (MQ=255)
                                                                                                                                          gAGTCTTCCCTTTCGCCCCCCGTCTGGTCTACATTTGGGGGGCGAAAAAAAGTGGCTATCGGTGCGTGTATGCAGGAGAGTGCTATTCTGGCATTTCCGTCGCACTCGATGCTTAGCAAGCGATAAACACATTGTAAGGATAACTTa             <  3:70410/147‑1 (MQ=255)
                                                                                                                                          gAGTCTTCCCTTTCGCCCCCCGTCTGGTCTACATTTGGGGGGCGAAAAAAAGTGGCTATCGGTGCGTGTATGCAGGAGAGTGCTATTCTGGCATTTCCGTCGCACTCGATGCTTAGCAAGCGATAAACACATTGTAAGGATAACTTa             <  8:382841/147‑1 (MQ=255)
                                                                                                                                            gTCTTCCCTTTCGCCCCCCGTCTGGTCTACATTTGGGGGGCGAAAAAAAGTGGCTATCGGTGCGTGTAAGCAGGAGAGTGCTATTCTGGCATTTCCGTCGCACTCGATGCTTAGCAAGCGATAAACACATTGTAAGGATAACTTATGaa         >  8:133912/1‑149 (MQ=255)
                                                                                                                                             tCTTCCCTTTCGCCCCCCGTCTGGTCTACATTTGGGGGGCGAAAAAAAGTGGCTATCGGTGCGTGTATGCAGGAGAGTGCTATTCTGGCATTTCCGTCGCACTCGATGCTTAGCAAGCGATAAACACATTGTAAGGATAACTTATGaa         >  4:121751/1‑148 (MQ=255)
                                                                                                                                             tCTTCCCTTTCGCCCCCCGTCTGGTCTACATTTGGGGGGCGAAAAAAAGTGGCTATCGGTGCGTGTATGCAGGAGAGTGCTATTCTGGCATTTCCGTCGCACTCGATGCTTAGCAAGCGATAAACACATTGTAAGGATAACTTATGaa         >  4:201111/1‑148 (MQ=255)
                                                                                                                                               ttCCCTTTCGCCCCCCGTCTGGTCTACATTTGGGGGGCGAAAAAAAGTGGCTATCGGTGCGTGTATGCAGGAGAGTGCTATTCTGGCATTTCCGTCGCACTCGATGCTTAGCAAGCGATAAACACATTGTAAGGATAACTTATGAAc        >  5:172203/1‑147 (MQ=255)
                                                                                                                                               ttCCCTTTCGCCCCCCGTCTGGTCTACATTTGGGGGGCGAAAAAAAGTGGCTATCGGTGCGTGTATGCAGGAGAGTGCTATTCTGGCATTTCCGTCGCACTCGATGCTTAGCAAGCGATAAACACATTGTAAGGATAACTTATGAAc        >  2:264620/1‑147 (MQ=255)
                                                                                                                                                tCCCTTTCGCCCCCCGTCTGGTCTACATTTGGGGGGCGAAAAAAAGTGGCTATCGGTGCGTGTATGCAGGAGAGTGCTATTCTGGCATTTCCGTCGCACTCGATGCTTAGCAAGCGATAAACACATTGTAAGGATAACTTATGAAc        <  5:107586/146‑1 (MQ=255)
                                                                                                                                                tCCCTTTCGCCCCCCGTCTGGTCTACATTTGGGGGGCGAAAAAAAGTGGCTATCGGTGCGTGTATGCAGGAGAGTGCTATTCTGGCATTTCCGTCGCACTCGATGCTTAGCAAGCGATAAACACATTGTAAGGATAACTTATGAAc        >  6:107586/1‑146 (MQ=255)
                                                                                                                                                 cccTTTCGCCCCCCGTCTGGTCTACATTTGGGGGGCGAAAAAAAGTGGCTATCGGTGCGTGTATGCAGGAGAGTGCTATTCTGGCATTTCCGTCGCACTCGATGCTTAGCAAGCGATAAACACATTGTAAGGATAACTTATGAACaa      <  5:181831/147‑1 (MQ=255)
                                                                                                                                                 cccTTTCGCCCCCCGTCTGGTCTACATTTGGGGGGCGAAAAAAAGTGGCTATCGGTGCGTGTATGCAGGAGAGTGCTATTCTGGCATTTCCGTCGCACTCGATGCTTAGCAAGCGATAAACACATTGTAAGGATAACTTATGAACaa      <  2:176036/147‑1 (MQ=255)
                                                                                                                                                 cccTTTCGCCCCCCGTCTGGTCTACATTTGGGGGGCGAAAAAAAGTGGCTATCGGTGCGTGTATGCAGGAGAGTGCTATTCTGGCATTTCCGTCGCACTCGATGCTTAGCAAGCGATAAACACATTGTAAGGATAACTTATGAACAAg     <  5:249862/148‑1 (MQ=255)
                                                                                                                                                 cccTTTCGCCCCCCGTCTGGTCTACATTTGGGGGGCGAAAAAAAGTGGCTATCGGTGCGTGTATGCAGGAGAGTGCTATTCTGGCATTTCCGTCGCACTCGATGCTTAGCAAGCGATAAACACATTGTAAGGATAACTTATGAACAAGa    >  1:359087/1‑149 (MQ=255)
                                                                                                                                                  ccTTTCGCCCCCCGTCTGGTCTACATTTGGGGGGCGAAAAAAAGTGGCTATCGGTGCGTGTATGCAGGAGAGTGCTATTCTGGCATTTCCGTCGCACTCGATGCTTAGCAAGCGATAAACACATTGTAAGGATAACTTATGAACAAGa    <  2:353511/148‑1 (MQ=255)
                                                                                                                                                    TTTCGCCCCCCGTCTGGTCTACATTTGGGGGGCGAAAAAAAGTGGCTATCGGTGCGTGTATGCAGGAGAGTGCTATTCTGGCATTTCCGTCGCACTCGATGCTTAGCAAGCGATAAACACATTGTAAGGATAACTTATGAACAAGACt  <  2:29692‑M1/148‑1 (MQ=255)
                                                                                                                                                    |                                                                                                                                                   
CTGAGTGCGAAGAACGCGATATCGAGCTGATAAAAGGCCTTAGGGCAGACCTGCGTGAGGCGGGTGAGAGCAATATTGGTATAATTTTTCAGCAATAAGACCAGAAAACGTGATTTAACGCCTGATTTGTCGTACCTGGAGTCTTCCCTTTCGCCCCCCGTCTGGTCTACATTTGGGGGGCGAAAAAAAGTGGCTATCGGTGCGTGTATGCAGGAGAGTGCTATTCTGGCATTTCCGTCGCACTCGATGCTTAGCAAGCGATAAACACATTGTAAGGATAACTTATGAACAAGACT  >  NC_000913/4199997‑4200292

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.