BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	4403997 =	97 (1.180)	4 (0.050)	4/256	NT	4.2%	coding (698/1005 nt)	hflC	HflB protease modulator specific for phage lambda cII repressor
*	?	NC_000913	4404016 =	89 (1.120)	4 (0.050)	4/256	NT	4.2%	coding (717/1005 nt)	hflC	HflB protease modulator specific for phage lambda cII repressor
Rejected: Frequency below/above cutoff threshold.

Only 100 of 113 total aligned reads displayed.

CTGAGACGAAGGGCAAAGTTCCGGTCATCAACCCGAACAGTATGGCGGCGCTGGGTATTGAAGTTGTCGATGTGCGTATCAAGCAGATCAACCTGCCGACCGAAGTGTCTGAAGCGATCTACAACCGTATGCGCGCCGAGCGTGAAGCGGTAGCGCGTCGTCACCGTTCACAAGGTCAGGAAGAAGCGGAAAAACTGCGCGCGACTGCCGACTATGAAGTGACCAGAACGCTGGCAGAAGCTGAGCGTCAGGGCCGCATCATGCGTGGTGAAGGCGATGCCGAAGCAGCCAAA  >  NC_000913/4403850‑4404142

ctgaatgcatcagcaaacagtttggctgcttcggcatcgccttcaccacgcatgatgcggccctgacgctcagcttctgccagcgttctggtcacttcatagtcggcagtcgcgcgcagtttttccgcttcttcctgaccttgtgaaCg                                                                                                                                                  >  3:167926‑M1/148‑149 (MQ=255)

 tgaatgcatcagcaaacagtttggctgcttcggcatcgccttcaccacgcatgatgcggccctgacgctcagcttctgccagcgttctggtcacttcatagtcggcagtcgcgcgcagtttttccgcttcttcctgaccttgtgaaCgg                                                                                                                                                 <  8:216463‑M1/3‑1 (MQ=255)

   agaCGAAGGGCAAAGTTCCGGTCATCAACCCGAACAGTATGGCGGCGCTGGGTATTGAAGTTGTCGATGTGCGTATCAAGCAGATCAACCTGCCGACCGAAGTGTCTGAAGCGATCTACAACCGTATGCGCGCCGAGCGTGAAGCgg                                                                                                                                                 <  5:360826/147‑1 (MQ=255)

   aatgcatcagcaaacagtttggctgcttcggcatcgccttcaccacgcatgatgcggccctgacgctcagcttctgccagcgttctggtcacttcatagtcggcagtcgcgcgcagtttttccgcttcttcctgaccttgtgaaCgg                                                                                                                                                 >  7:216463‑M1/145‑147 (MQ=255)

       gAAGGGCAAAGTTCCGGTCATCAACCCGAACAGTATGGCGGCGCTGGGTATTGAAGTTGTCGATGTGCGTATCAAGCAGATCAACCTGCCGACCGAAGTGTCTGAAGCGATCTACAACCGTATGCGCGCCGAGCGTGAAGCGGTAgcgc                                                                                                                                           >  8:350509/1‑149 (MQ=255)

       gAAGGGCAAAGTTCCGGTCATCAACCCGAACAGTATGGCGGCGCTGGGTATTGAAGTTGTCGATGTGCGTATCAAGCAGATCAACCTGCCGACCGAAGTGTCTGAAGCGATCTACAACCGTATGCGCGCCGAGCGTGAAGCGGTAgcgc                                                                                                                                           >  1:361943/1‑149 (MQ=255)

         aGGGCAAAGTTCCGGTCATCAACCCGAACAGTATGGCGGCGCTGGGTATTGAAGTTGTCGATGTGCGTATCAAGCAGATCAACCTGCCGACCGAAGTGTCTGAAGCGATCTACAACCGTATGCGCGCCGAGCGTGAAGCGGTAGCGcgt                                                                                                                                         <  6:236115/149‑1 (MQ=255)

            gCAAAGTTCCGGTCATCAACCCGAACAGTATGGCGGCGCTGGGTATTGAAGTTGTCGATGTGCGTATCAAGCAGATCAACCTGCCGACCGAAGTGTCTGAAGCGATCTACAACCGTATGCGCGCCGAGCGTGAAGCGGTAGCGcgtcgt                                                                                                                                      >  7:133724/1‑149 (MQ=255)

              aacagtttggctgcttcggcatcgccttcaccacgcatgatgcggccctgacgctcagcttctgccagcgttctggtcacttcatagtcggcagtcgcgcgcagtttttccgcttcttcctgaccttgtgaagCGGTAGCGCGTCGTCa                                                                                                                                    <  8:295027‑M1/16‑1 (MQ=255)

              aaaGTTCCGGTCATCAACCCGAACAGTATGGCGGCGCTGGGTATTGAAGTTGTCGATGTGCGTATCAAGCAGATCAACCTGCCGACCGAAGTGTCTGAAGCGATCTACAACCGTATGCGCGCCGAGCGTGAAGCGGTAGCGCGTCGTCa                                                                                                                                    <  6:48572/149‑1 (MQ=255)

              aaaGTTCCGGTCATCAACCCGAACAGTATGGCGGCGCTGGGTATTGAAGTTGTCGATGTGCGTATCAAGCAGATCAACCTGCCGACCGAAGTGTCTGAAGCGATCTACAACCGTATGCGCGCCGAGCGTGAAGCGGTAGCGCGTCGTCa                                                                                                                                    >  7:97400/1‑149 (MQ=255)

               aaGTTCCGGTCATCAACCCGAACAGTATGGCGGCGCTGGGTATTGAAGTTGTCGATGTGCGTATCAAGCAGATCAACCTGCCGACCGAAGTGTCTGAAGCGATCTACAACCGTATGCGCGCCGAGCGTGAAGCGGTAGCGCGTCGTCAc                                                                                                                                   <  3:168285/149‑1 (MQ=255)

                 gTTCCGGTCATCAACCCGAACAGTATGGCGGCGCTGGGTATTGAAGTTGTCGATGTGCGTATCAAGCAGCTCAACCTGCCGCCCGAAGTGTCTGAAGCGATCTACAACCGTATGCGCGCCGCGCGTGAAGCGGTAGCGCGTCGTCACCg                                                                                                                                 >  6:99533/1‑149 (MQ=255)

                     ttggctgcttcggcatcgccttcaccacgcatgatgtggccctgacgctcagcttctgccagcgttctggtcacttcatagtcggcagtcgcgcgcagtttttccgcttctccctgaccttgtgaaCGGt                                                                                                                                                >  6:132358‑M1/127‑130 (MQ=255)

                     ttggctgcttcggcatcgccttcaccacgcatgatgtggccctgacgctcagcttctgccagcgttctggtcacttcatagtcggcagtcgcgcgcagtttttccgcttctccctgaccttgtgaaCGGt                                                                                                                                                <  5:132358‑M1/4‑1 (MQ=255)

                          atcaACCCGAACAGTATGGCGGCGCTGGGTATTGAAGTTGTCGATGTGCGTATCAAGCAGATCAACCTGCCGACCGAAGTGTCTGAAGCGATCTACAACCGTATGCGCGCCGAGCGTGAAGCGGTAGCGCGTCGTCACCGTTCACAAgg                                                                                                                        >  8:2832/1‑149 (MQ=255)

                           tcaACCCGAACAGTATGGCGGCGCTGGGTATTGAAGTTGTCGATGTGCGTATCAAGCAGATCAACCTGCCGACCGAAGTGTCTGAAGCGATCTACAACCGTATGCGCGCCGAGCGTGAAGCGGTAGCGCGTCGTCACCGTTCACAAGGt                                                                                                                       <  2:361943/149‑1 (MQ=255)

                           cttcggcatcgccttcaccacgcatgatgcggccctgacgctcagcttctgccagcgttctggtcacttcatagtcggcagtcgcgcgcagtttttccgcttcttcctgaccttgtgaagCGGTAGCGCGTCGTCACCGTTCACAAg                                                                                                                         >  7:295027‑M1/121‑147 (MQ=255)

                             aaCCCGAACAGTATGGCGGCGCTGGGTATTGAAGTTGTCGATGTGCGTATCAAGCAGATCAACCTGCCGACCGAAGTGTCTGAAGCGATCTACAACCGTATGCGCGCCGAGCGTGAAGCGGTAGCGCGTCGTCACCGTTCACAAGGTCa                                                                                                                     <  8:133724/149‑1 (MQ=255)

                               cccGAACAGTATGGCGGCGCTGGGTATTGAAGTTGTCGATGTGCGTATCAAGCAGATCAACCTGCCGACCGAAGTGTCTGAAGCGATCTACAACCGTATGCGCGCCGAGCGTGAAGCGGTAGCGCGTCGTCACCGTTCACAAGGTCAg                                                                                                                    >  1:32336/1‑148 (MQ=255)

                                   aaCAGTATGGCGGCGCTGGGTATTGAAGTTGTCGATGTGCGTATCAAGCAGATCAACCTGCCGACCGAAGTGTCTGAAGCGATCTACAACCGTATGCGCGCCGAGCGTGAAGCGGTAGCGcgtcgt                                                                                                                                      <  4:138538/126‑1 (MQ=255)

                                   aaCAGTATGGCGGCGCTGGGTATTGAAGTTGTCGATGTGCGTATCAAGCAGATCAACCTGCCGACCGAAGTGTCTGAAGCGATCTACAACCGTATGCGCGCCGAGCGTGAAGCGGTAGCGcgtcgt                                                                                                                                      >  3:138538/1‑126 (MQ=255)

                                   aaCAGTATGGCGGCGCTGGGTATTGAAGTTGTCGATGTGCGTATCAAGCAGATCAACCTGCCGACCGAAGTGTCTGAAGCGATCTACAACCGTATGCGCGCCGAGCGTGAAGCGGTAGCGCGTCGTCACCGTTCACAAGGTCAGgaag                                                                                                                >  1:175843/1‑148 (MQ=255)

                                     cAGTATGGCGGCGCTGGGTATTGAAGTTGTCGATGTGCGTATCAAGCAGATCAACCTGCCGACCGAAGTGTCTGAAGCGATCTACAACCGTATGCGCGCCGAGCGTGAAGCGGTAGCGCGTCGTCACCGTTCACAAGGTCAGGaagaag                                                                                                             <  6:21739/149‑1 (MQ=255)

                                       gTATGGCGGCGCTGGGTATTGAAGTTGTCGATGTGCGTATCAAGCAGATCAACCTGCCGACCGAAGTGTCTGAAGCGATCTACAACCGTATGCGCGCCGAGCGTGAAGCGGTAGCGCGTCGTCACCGTTCACAAGGTCAGGAAGAAGCg                                                                                                           >  6:219525/1‑149 (MQ=255)

                                        tATGGCGGCGCTGGGTATTGAAGTTGTCGATGTGCGTATCAAGCAGATCAACCTGCCGACCGAAGTGTCTGAAGCGATCTACAACCGTATGCGCGCCGAGCGTGAAGCGGTAGCGCGTCGTCACCGTTCACAAGGTCAGGAAGAAGCg                                                                                                           >  7:237313/1‑148 (MQ=255)

                                        tATGGCGGCGCTGGGTATTGAAGTTGTCGATGTGCGTATCAAGCAGATCAACCTGCCGACCGAAGTGTCTGAAGCGATCTACAACCGTATGCGCGCCGAGCGTGAAGCGGTAGCGCGTCGTCACCGTTCACAAGGTCAGGAAGAAGCg                                                                                                           >  2:153435/1‑148 (MQ=255)

                                            gcggcgCTGGGTATTGAAGTTGTCGATGTGCGTATCAAGCAGATCAACCTGCCGACCGAAGTGTCTGAAGCGATCTACAACCGTATGCGCGCCGAGCGTGAAGCGGTAgcgc                                                                                                                                           >  2:225542/1‑112 (MQ=255)

                                            gcggcgCTGGGTATTGAAGTTGTCGATGTGCGTATCAAGCAGATCAACCTGCCGACCGAAGTGTCTGAAGCGATCTACAACCGTATGCGCGCCGAGCGTGAAGCGGTAgcgc                                                                                                                                           <  1:225542/112‑1 (MQ=255)

                                            gcggcgCTGGGTATTGAAGTTGTCGATGTGCGTATCAAGCAGATCAACCTGCCGACCGAAGTGTCTGAAGCGATCTACAACCGTATGCGCGCCGAGCGTGAAGCGGTAGCGCGTCGTCACCGTTCACAAGGTCAGGAAGAAGCGGaaa                                                                                                       <  4:340379/148‑1 (MQ=255)

                                               gcgcTGGGTATTGAAGTTGTCGATGTGCGTATCAAGCAGATCAACCTGCCGACCGAAGTGTCTGAAGCGATCTACAACCGTATGCGCGCCGAGCGTGAAGCGGTAGCGCGTCGTCACCGTTCACAAGGTCAGGAAGAAGCGGAAAAACt                                                                                                   >  2:45388/1‑149 (MQ=255)

                                                 gcTGGGTATTGAAGTTGTCGATGTGCGTATCAAGCAGATCAACCTGCCGACCGAAGTGTCTGAAGCGATCTACAACCGTATGCGCGCCGAGCGTGAAGCGGTAGCGCGTCGTCACCGTTCACAAGGTCAGGAAGAAGCGGAAAAACTgc                                                                                                 <  3:12108/149‑1 (MQ=255)

                                                     ggTATTGAAGTTGTCGATGTGCGTATCAAGCAGATCAACCTGCCGACCGAAGTGTCTGAAGCGATCTACAACCGTATGCGCGCCGAGCGTGAAGCGGTAGCGCGTCGTCACCGTTCACAAGGTCAGGAAGAAGCGGAAAAACTgcgcg                                                                                              <  6:200616/148‑1 (MQ=255)

                                                     ggTATTGAAGTTGTCGATGTGCGTATCAAGCAGATCAACCTGCCGACCGAAGTGTCTGAAGCGATCTACAACCGTATGCGCGCCGAGCGTGAAGCGGTAGCGCGTCGTCACCGTTCACAAGGTCAGGAAGAAGCGGAAAAACTgcgc                                                                                               <  3:232547/147‑1 (MQ=255)

                                                       tATTGAAGTTGTCGATGTGCGTATCAAGCAGATCAACCTGCCGACCGAAGTGTCTGAAGCGATCTACAACCGTATGCGCGCCGAGCGTGAAGCGGTAGCGCGTCGTCACCGTTCACAAGGTCAGGAAGAAGCGGAAAAACTGCGCGCGa                                                                                           <  7:2832/149‑1 (MQ=255)

                                                       tATTGAAGTTGTCGATGTGCGTATCAAGCAGATCAACCTGCCGACCGAAGTGTCTGAAGCGATCTACAACCGTATGCGCGCCGAGCGTGAAGCGGTAGCGCGTCGTCACCGTTCACAAGGTCAGGAAGAAGCGGAAAAACTGCGCGCGa                                                                                           >  1:42949/1‑149 (MQ=255)

                                                       tATTGAAGTTGTCGATGTGCGTATCAAGCAGATCAACCTGCCGACCGAAGTGTCTGAAGCGATCTACAACCGTATGCGCGCCGAGCGTGAAGCGGTAGCGCGTCGTCACCGTTCACAAGGTCAGGAAGAAGCGGAAAAACTGCGCGCGa                                                                                           >  1:310651/1‑149 (MQ=255)

                                                         ttGAAGTTGTCGATGTGCGTATCAAGCAGATCAACCTGCCGACCGAAGTGTCTGAAGCGATCTACAACCGTATGCGCGCCGAGCGTGAAGCGGTAGCGCGTCGTCACCGTTCACAAGGTCAGGAAGAAGCGGAAAAACTGCGCGCGACt                                                                                         >  1:35921/1‑149 (MQ=255)

                                                           gAAGTTGTCGATGTGCGTATCAAGCAGATCAACCTGCCGACCGAAGTGTCTGAAGCGATCTACAACCGTATGCGCGCCGAGCGTGAAGCGGTAGCGCGTCGTCACCGTTCACAAGGTCAGGAAGAAGCGGAAAAACTGCGCGCGACt                                                                                         <  3:206984/147‑1 (MQ=255)

                                                           gAAGTTGTCGATGTGCGTATCAAGCAGATCAACCTGCCGACCGAAGTGTCTGAAGCGATCTACAACCGTATGCGCGCCGAGCGTGAAGCGGTAGCGCGTCGTCACCGTTCACAAGGTCAGGAAGAAGCGGAAAAACTGCGCGCGACt                                                                                         >  4:206984/1‑147 (MQ=255)

                                                               ttGTCGATGTGCGTATCAAGCAGATCAACCTGCCGACCGAAGTGTCTGAAGCGATCTACAACCGTATGCGCGCCGAGCGTGAAGCGGTAGCGCGTCGTCACCGTTCACAAGGTCAGGAAGAAGCGGAAAAACTGCGCGCGACTGCCGAc                                                                                   <  7:158032/149‑1 (MQ=255)

                                                               ttGTCGATGTGCGTATCAAGCAGATCAACCTGCCAACCGAAGTGTCTGAAGCGATCTACAACCGTATGCGCGCCGAGCGTGAAGCGGTCGCGCGTCGTCACCCTTCACAAGGTCAGGAAGAAGCGGAAAAACTGCGCGCGACTGCCGAc                                                                                   >  7:286681/1‑149 (MQ=255)

                                                               ttGTCGATGTGAGTATCAAGCAGATCAACCTGCCGACCGAAGTGTCTGAAGCGATCTACAACCGTATGCGCGCCGAGCGTGAAGCCGTAGCGCGTCGTCACCGTTCACAACGTCAGGAAGAAGCCGAAAAACTGCGCGCGACTGCCGAc                                                                                   >  1:47027/1‑149 (MQ=255)

                                                               tgacgctcagcttctgccagcgttctggtcacttcatagtcggcagtcgcgcgcagtttttccgcttcttcctgaccttgtgaaCGGt                                                                                                                                                >  8:268064‑M1/85‑88 (MQ=255)

                                                               tgacgctcagcttctgccagcgttctggtcacttcatagtcggcagtcgcgcgcagtttttccgcttcttcctgaccttgtgaaCGGt                                                                                                                                                <  7:268064‑M1/4‑1 (MQ=255)

                                                                     aTGTGCGTATCAAGCAGATCAACCTGCCGACCGAAGTGTCTGAAGCGATCTACAACCGTATGCGCGCCGAGCGTGAAGCGGTAGCGCGTCGTCACCGTTCACAAGGTCAGGAAGAAGCGGAAAAACTGCGCGCGACTGCCGACTATGaa                                                                             <  3:82295/149‑1 (MQ=255)

                                                                        tgCGTATCAAGCAGATCAACCTGCCGACCGAAGTGTCTGAAGCGATCTACAACCGTATGCGCGCCGAGCGTGAAGCGGTAGCGCGTCGTCACCGTTCACAAGGTCAGGAAGAAGCGGAAAAACTGCGCGCGACTGCCGACTATGAAGt                                                                           <  6:129928/148‑1 (MQ=255)

                                                                          cGTATCAAGCAGATCAACCTGCCGACCGAAGTGTCTGAAGCGATCTACAACCGTATGCGCGCCGAGCGTGAAGCGGTAGCGCGTCGTCACCGTTCACAAGGTCAGGAAGAAGCGGAAAAACTGCGCGCGACTGCCGACTATGAAGTGAc                                                                        <  4:308897/149‑1 (MQ=255)

                                                                          cGTATCAAGCAGATCAACCTGCCGACCGAAGTGTCTGAAGCGATCTACAACCGTATGCGCGCAGAGCGTGAAGCGGTAGCGCGTCGTCACCGTTCACAAGGTCAGGAAGAAGCGGAAAAACTGCGCGCGACTGCCGACTATGAAGTGAc                                                                        <  2:81371/149‑1 (MQ=255)

                                                                            tATCAAGCAGATCAACCTGCCGACCGAAGTGTCTGAAGCGATCTACAACCGTATGCGCGCCGAGCGTGAAGCGGTAGCGCGTCGTCACCGTTCACAAGGTCAGGAAGAAGCGGAAAAACTGCGCGCGACTGCCGACTATGAAGTGAc                                                                        >  1:246690/1‑147 (MQ=255)

                                                                            tATCAAGCAGATCAACCTGCCGACCGAAGTGTCTGAAGCGATCTACAACCGTATGCGCGCCGAGCGTGAAGCGGTAGCGCGTCGTCACCGTTCACAAGGTCAGGAAGAAGCGGAAAAACTGCGCGCGACTGCCGACTATGAAGTGAc                                                                        >  2:211863/1‑147 (MQ=255)

                                                                            tATCAAGCAGATCAACCTGCCGACCGAAGTGTCTGAAGCGATCTACAACCGTATGCGCGCCGAGCGTGAAGCGGTAGCGCGTCGTCACCGTTCACAAGGTCAGGAAGAAGCGGAAAAACTGCGCGCGACTGCCGACTATGAAGTGACCa                                                                      <  3:222397/149‑1 (MQ=255)

                                                                             aTCAAGCAGATCAACCTGCCGCCCGAAGTGTCTGAAGCGATCTACAACCGTATGCGCGCCGAGCGTGAAGCGGTAGCGCGTCTTCACCGTTCCCAAGGTCAGGAAGCAGCGGAAACACTGCGCGCGACTGCCCACTATGAAGTGAc                                                                        >  5:316552/1‑146 (MQ=255)

                                                                             aTCAAGCAGATCAACCTGCCGACCGAAGTGTCTGAAGCGATCTACAACCGTATGCGCGCCGAGCGTGAAGCGGTAGCGCGTCGTCACCGTTCACAAGGTCAGGAAGAAGCGGAAAAACTgc                                                                                                 <  4:323989/121‑1 (MQ=255)

                                                                                aaGCAGATCAACCTGCCGACCGAAGTGTCTGAAGCGATCTACAACCGTATGCGCGCCGAGCGTGAAGCGGTAGCGCGTCGTCACCGTTCACAAGGTCAGGAAGAAGCGGAAAAACTGCGCGCGACTGCCGACTATGAAGTGCCCAGAAc                                                                  >  8:75657/1‑149 (MQ=255)

                                                                                aaGCAGATCAACCTGCCGACCGAAGTGTCTGAAGCGATCTACAACCGTATGCGCGCCGAGCGTGAAGCGGTAGCGCGTCGTCACCGTTCACAAGGTCAGGAAGAAGCGGAAAAACTGCGCGCGACTGCCGACTATGAAGTGACCAGaa                                                                   <  5:121473/148‑1 (MQ=255)

                                                                                aaGCAGATCAACCTGCCGACCGAAGTGTCTGAAGCGATCTACAACCGTATGCGCGCCGAGCGTGAAGCGGTAGCGCGTCGTCACCGTTCACAAGGTCAGGAAGAAGCGGAAAAACTGCGCGCGACTGCCGACTATGAAGTGACCAGAAc                                                                  >  5:192927/1‑149 (MQ=255)

                                                                                   cAGATCAACCTGCCGACCGAAGTGTCTGAAGCGATCTACAACCGTATGCGCGCCGAGCGTGAAGCGGTAGCGCGTCGTCACCGTTCACAAGGTCAGGAAGAAGCGGAAAAACTGCGCGCGACTGCCGACTATGAAGTGACCAGAACGCt                                                               <  1:211863/149‑1 (MQ=255)

                                                                                    aGATCAACCTGCCGACCGAAGTGTCTGAAGCGATCTACAACCGTATGCGCGCCGAGCGTGAAGCGGTAGCGCGTCGTCACCGTTCACAAGGTCAGGAAGAAGCGGAAAAACTGCGCGCGACTGCCGACTATGAAGTGACCAGAACGCTg                                                              >  5:341291/1‑149 (MQ=255)

                                                                                      aTCAACCTGCCGACCGAAGTGTCTGAAGCGATCTACAACCGTATGCGCGCCGAGCGTGAAGCGGTAGCGCGTCGTCACCGTTCACAAGGTCAGGAAGAAGCGGAAAAACTGCGCGCGACTGCCGACTATGAAGTGAc                                                                        <  3:177762/137‑1 (MQ=255)

                                                                                      aTCAACCTGCCGACCGAAGTGTCTGAAGCGATCTACAACCGTATGCGCGCCGAGCGTGAAGCGGTAGCGCGTCGTCACCGTTCACAAGGTCAGGAAGAAGCGGAAAAACTGCGCGCGACTGCCGACTATGAAGTGAc                                                                        >  4:177762/1‑137 (MQ=255)

                                                                                          aCCTGCCGACCGAAGTGTCTGAAGCGATCTACAACCGTATGCGCGCCGAGCGTGAAGCGGTAGCGCGTCGTCACCGTTCACAAGGTCAGGAAGAAGCGGAAAAACTGCGCGCGACTGCCGACTATGAAGTGACCAGAACGCTGGCAg                                                          >  5:28784/1‑147 (MQ=255)

                                                                                           ccTGCCGACCGAAGTGTCTGAAGCGATCTACAACCGTATGCGCGCCGAGCGTGAAGCGGTAGCGCGTCGTCACCGTTCACAAGGTCAGGAAGAAGCGGAAAAACTGCGCGCGACTGCCGACTATGAAGTGACCAGAACGCTGGCAGAAg                                                       >  1:182911/1‑149 (MQ=255)

                                                                                                 gaccgaAGTGTCTGAAGCGATCTACAACCGTATGCGCGCCGAGCGTGAAGCGGTAGCGCGTCGTCACCGTTCACAAGGTCAGGAAGAAGCGGAAAAACTGCGCGCGACTGCCGACTATGAAGTGACCAGAACGCTGGCAGAAGCTGAGc                                                 <  8:211055/149‑1 (MQ=255)

                                                                                                 gaccgaAGTGTCTGAAGCGATCTACAACCGTATGCGCGCCGAGCGTGAAGCGGTAGCGCGTCGTCACCGTTCACAAGGTCAGGAAGAAGCGGAAAAACTGCGCGCGACTGCCGACTATGAAGTGACCAGAACGCTGGCAGAAGCTGAGc                                                 >  2:186146/1‑149 (MQ=255)

                                                                                                    cgaAGTGTCTGAAGCGATCTACAACCGTATGCGCGCCGAGCGTGAAGCGGTAGCGCGTCGTCACCGTTCACAAGGTCAGGAAGAAGCGGAAAAACTGCGCGCGACTGCCGACTATGAAGTGACCAGAACGCTGGCAGAAGCTGAGCGt                                               >  8:327813/1‑148 (MQ=255)

                                                                                                    cgaAGTGTCTGAAGCGATCTACAACCGTATGCGCGCCGAGCGTGAAGCGGTAGCGCGTCGTCACCGTTCACAAGGTCAGGAAGAAGCGGAAAAACTGCGCGCGACTGCCGACTATGAAGTGACCAGAACGCTGGCAGAAGCTGAGCGt                                               >  8:180135/1‑148 (MQ=255)

                                                                                                     gaAGTGTCTGAAGCGATCTACAACCGTATGCGCGCCGAGCGTGAAGCGGTAGCGCGTCGTCACCGTTCACAAGGTCAGGAAGAAGCGGAAAAACTGCGCGCGACTGCCGACTATGAAGTGACCAGAACGCTGGCAGAAGCTGAGCGTCa                                             <  8:237313/149‑1 (MQ=255)

                                                                                                     gaAGTGTCTGAAGCGATCTACAACCGTATGCGCGCCGAGCGTGAAGCGGTAGCGCGTCGTCACCGTTCACAAGGTCAGGAAGAAGCGGAAAAACTGCGCGCGACTGCCGACTATGAAGTGACCAGAACGCTGGCAGAAGCTGAGCGTCa                                             <  2:246690/149‑1 (MQ=255)

                                                                                                        gtgtCTGAAGCGATCTACAACCGTATGCGCGCCGAGCGTGAAGCGGTAGCGCGTCGTCACCGTTCACAAGGTCAGGAAGAAGCGGAAAAACTGCGCGCGACTGCCGACTATGAAGTGACCAGAACGCTGGCAGAAGCTGAGCGTCAggg                                          <  1:153435/149‑1 (MQ=255)

                                                                                                             tGAAGCGATCTACAACCGTATGCGCGCCGAGCGTGAAGCGGTAGCGCGTCGTCACCGTTCACAAGGTCAGGAAGAAGCGGAAAAACTGCGCGCGACTGCCGACTATGAAGTGACCAGAACGCTGGCAGAAGCTGAGCGTCAGGGCCGca                                     >  5:350012/1‑149 (MQ=255)

                                                                                                             tGAAGCGATCTACAACCGTATGCGCGCCGAGCGTGAAGCGGTAGCGCGTCGTCACCGTTCACAAGGTCAGGAAGAAGCGGAAAAACTGCGCGCGACTGCCGACTATGAAGTGACCAGAACGCTGGCAGAAGCTCAGCGTCAGGGCCGca                                     >  3:132379/1‑149 (MQ=255)

                                                                                                              gAAGCGATCTACAACCGTATGCGCGCCGAGCGTGAAGCGGTAGCGCGTCGTCACCGTTCACAAGGTCAGGAAGAAGCGGAAAAACTGCGCGCGACTGCCGa                                                                                    <  4:102839/101‑1 (MQ=255)

                                                                                                              gAAGCGATCTACAACCGTATGCGCGCCGAGCGTGAAGCGGTAGCGCGTCGTCACCGTTCACAAGGTCAGGAAGAAGCGGAAAAACTGCGCGCGACTGCCGa                                                                                    >  3:102839/1‑101 (MQ=255)

                                                                                                               aaGCGATCTACAACCGTATGCGCGCCGAGCGTGAAGCGGTAGCGCGTCGTCACCGTTCACAAGGTCAGGAAGAAGCGGAAAAACTGCGCGCGACTGCCGACTATGAAGTGACCAGAACGCTGGCAGAAGCTGAGCGTCAGGGCCGcat                                    <  7:105084/148‑1 (MQ=255)

                                                                                                                cgCGATCTACAACCGTATGCGCGCCGAGCGTGAAGCGGTAGCGCGTCGTCACCGTTCACAAGGTCAGGAAGAAGCGGAAAAACTGCGCGCGACTGCCGACTATGAAGTGACCAGAACGCTGGCAGAAGCTGAGCGTCAGGGCCGcatca                                  <  5:268639/148‑1 (MQ=255)

                                                                                                                aGCGATCTACAACCGTATGCGCGCCGAGCGTGAAGCGGTAGCGCGTCGTCACCGTTCACAAGGTCAGGAAGAAGCGGAAAAACTGCGCGCGACTGCCGACTATGAAGTGACCAGAACGCTGGCAGAAGCTGAGCGTCAGGGCCGcatca                                  >  7:216896/1‑149 (MQ=255)

                                                                                                                aGCGATCTACAACCGTATGCGCGCCGAGCGTGAAGCGGTAGCGCGTCGTCACCGTTCACAAGGTCAGGAAGAAGCGGAAAAACTGCGCGCGACTGCCGACTATGAAGTGACCAGAACGCTGGCAGAAGCTGAGCGTCAGGGCCGcatca                                  <  1:11176/149‑1 (MQ=255)

                                                                                                                 gCGATCTACAACCGTATGCGCGCCGAGCGTGAAGCGGTAGCGCGTCGTCACCGTTCACAAGGTCAGGAAGAAGCGGAAAAACTGCGCGCGACTGCCGACTATGAAGTGACCAGAACGCTGGCAGAAGCTGAGCGTCAGGGCCGcatcat                                 <  1:45388/149‑1 (MQ=255)

                                                                                                                       tACAACCGTATGCGCGCCGAGCGTGAAGCGGTAGCGCGTCGTCACCGTTCACAAGGTCAGGAAGAAGCGGAAAAACTGCGCGCGACTGCCGACTATGAAGTGACCAGACCGCTGGCAGAAGCTGAGCGTCAGGGCCGCATCATGCgtgg                           >  5:241548/1‑149 (MQ=255)

                                                                                                                       tACAACCGTATGCGCGCCGAGCGTGAAGCGGTAGCGCGTCGTCACCGTTCACAAGGTCAGGAAGAAGCGGAAAAACTGCGCGCGACTGCCGACTATGAAGTGACCAGAACGCTGGCAGAAGCTGAGCGTCAGGGCCGCATCATGCgtgg                           >  1:24590/1‑149 (MQ=255)

                                                                                                                        aCAACCGTATGCGCGCCGAGCGTGAAGCGGTAGCGCGTCGTCACCGTTCACAAGGTCAGGAAGAAGCGGAAAAACTGCGCGCGACTGCCGACTATGAAGTGACCAGAACGCTg                                                              <  6:83542/113‑1 (MQ=255)

                                                                                                                        aCAACCGTATGCGCGCCGAGCGTGAAGCGGTAGCGCGTCGTCACCGTTCACAAGGTCAGGAAGAAGCGGAAAAACTGCGCGCGACTGCCGACTATGAAGTGACCAGAACGCTg                                                              >  5:83542/1‑113 (MQ=255)

                                                                                                                         tttccgcttcttcctgaccttgtgaaCGGTGACGACGCGCTACCGTTCACAAGGTCAGGAAGAAGCGGAAAAACTGCGCGCGACTGCCGACTATGAAGTGACCAGAACGCTGGCAGAAGc                                                      <  8:304854‑M1/94‑1 (MQ=255)

                                                                                                                         tttccgcttcttcctgaccttgtgaaCGGTGACGACGCGCTACCGTTCACAAGGTCAGGAAGAAGCGGAAAAACTGCGCGCGACTGCCGACTATGAAGTGACCAGAACGCTGGCAGAAGc                                                      >  7:304854‑M1/27‑120 (MQ=255)

                                                                                                                         cAACCGTATGCGCGCCGAGCGTGAAGCGGTAGCGCGTCGTCACCGTTCACAAGGTCAGGAAGAAGCGGAAAAACTGCGCGCGACTGCCGACTATGAAGTGACCAGAACGCTGGCAGAAGCTGAGCGTCAGGGCCGCATCATGCgtggt                          >  4:249859/1‑148 (MQ=255)

                                                                                                                           aCCGTATGCGCGCCGAGCGTGAAGCGGTAGCGCGTCGTCACCGTTCACAAGGTCAGGAAGAAGCGGAAAAACTGCGCGCGACTGCCGACTATGAAGTGACCAGAACGCTGGCAGAAGCTGAGCGTCAGGGCCGCATCATGCGTGGTGaa                       <  6:192927/149‑1 (MQ=255)

                                                                                                                           aCCGTATGCGCGCCGAGCGTGAAGCGGTAGCGCGTCGTCACCGTTCACAAGGGCAGGAAGAAGCGGAAAAACTGCGCGCGACTGCCGACTATGAAGTGACCAGAACGCTGGCAGAAGCTGAGCGTCAGGGCCGCATCATGCGTGGTGaa                       <  7:350509/149‑1 (MQ=255)

                                                                                                                            ccGTATGCGCGCCGAGCGTGAAGCGGTAGCGCGTCGTCACCGTTCACAAGGTCAGGAAGAAGCGGAAAAACTGCGCGCGACTGCCGACTATGAAGTGACCAGAACGCTGGCAGAAGCTCAGCGTCAGGGCCGCATCATGCGTGGTGAAg                      <  4:132379/149‑1 (MQ=255)

                                                                                                                             cGTATGCGCGCCGAGCGTGAAGCGGTAGCGCGTCGTCACCGTTCACAAGGTCAGGAAGAAGCGGAAAAACTGCGCGCGACTGCCGACTATGAAGTGACCAGAACGCTGGCAGAAGCTGAGCGTCAGGGCCGCATCATGCGTGGTGAAgg                     <  2:310651/149‑1 (MQ=255)

                                                                                                                                 tGCGCGCCGAGCGTGAAGCGGTAGCGCGTCGTCACCGTTCACAAGGTCAGGAAGAAGCGGAAAAACTGCGCGCGACTGCCGACTATGAAGTGACCAGAACGCTGGCAGAAGCTGAGCGTCAGGGCCGCATCATGCGTGGTGAAGGCGa                  <  2:175843/148‑1 (MQ=255)

                                                                                                                                        cGAGCGTGAAGCGGTAGCGCGTCGTCACCGTTCACAAGGTCAGGAAGAAGCGGAAAAACTGCGCGCGACTGCCGACTATGAAGTGACCAGAACGCTGGCAGCAGCTGAGCGTCAGGGCCGCATCATGCGTGGTGAAGGCGATGCCGAag          >  8:351624/1‑149 (MQ=255)

                                                                                                                                         gAGCGTGAAGCGGTAGCGCGTCGTCACCGTTCACAAGGTCAGGAAGAAGCGGAAAAACTGCGCGCGACTGCCGACTATGAAGTGACCAGAACGCTGGCAGAAGCTGAGCGTCAGGGCCGCATCATGCGTGGTGAAGGCGATGCCGAag          >  6:148988/1‑148 (MQ=255)

                                                                                                                                          aGCGTGAAGCGGTAGCGCGTCGTCACCGTTCACAAGGTCAGGAAGAAGCGGAAAAACTGCGCGCGACTGCCGACTATGAAGTGACCAGAACGCTGGCAGAAGCTGAGCGTCAGGGCCGCATCATGCGTGGTGAAGGCGATGCCGAagca        <  2:307651/149‑1 (MQ=255)

                                                                                                                                          aGCGTGAAGCGGTAGCGCGTCGTCACCGTTCACAAGGTCAGGAAGAAGCGGAAAAACTGCGCGCGACTGCCGACTATGAAGTGACCAGAACGCTGGCAGAAGCTGAGCGTCAGGGCCGCATCATGCGTGGTGAAGGCGATGCCGAag          >  3:230998/1‑147 (MQ=255)

                                                                                                                                             gTGAAGCGGTAGCGCGTCGTGACGGTTCACAAGGTTAGGAAGATGCGGAAAAACTGCGTGCGACTGCCGTCTTTGAAGTGTCCTGAACGATGGCAGAAGCTGAGCGTCAGGGCCGCATCATGCGTGGTGAAGGCGATGCCGAagcagcg     <  6:316552/149‑2 (MQ=255)

                                                                                                                                               gAAGCGGTAGCGCGTCGTCACCGTTCACAAGGTCAGGAAGAAGCGGAAAAACTGCGCGCGACTGCCGACTATGAAGTGACCAGAACGCTGGCAGAAGCTGAGCGTCAGGGCCGCATCATGCGTGGTGAAGGCGATGCCGaa           <  4:210578/141‑1 (MQ=255)

                                                                                                                                               gAAGCGGTAGCGCGTCGTCACCGTTCACAAGGTCAGGAAGAAGCGGAAAAACTGCGCGCGACTGCCGACTATGAAGTGACCAGAACGCTGGCAGAAGCTGAGCGTCAGGGCCGCATCATGCGTGGTGAAGGCGATGCCGaa           >  3:210578/1‑141 (MQ=255)

                                                                                                                                               gAAGCGGTAGCGCGTCGTCACCGTTCACAAGGTCAGGAAGAAGCGGAAAAACTGCGCGCGACTGCCGACTATGAAGTGACCAGAACGCTGGCAGAAGCTGAGCGTCAGGGCCGCATCATGCGTGGTGAAGGCGATGCCGAAGCAGCCa    >  1:333120/1‑148 (MQ=255)

                                                                                                                                                aaGCGGAAGCGCGGCGTCACCGTTCACAAGGTCAGGCAGAAGCGCAAAAACTGCGCGCGACTGCCGACTATGAAGTGACCAGAACGCGGGCAGAAGCTGAGCGGCAGGGCCGCATCATGCGTGGGGAAGGCGATGCCGAAGCAGCCaaa  <  5:99533/149‑1 (MQ=255)

CTGAGACGAAGGGCAAAGTTCCGGTCATCAACCCGAACAGTATGGCGGCGCTGGGTATTGAAGTTGTCGATGTGCGTATCAAGCAGATCAACCTGCCGACCGAAGTGTCTGAAGCGATCTACAACCGTATGCGCGCCGAGCGTGAAGCGGTAGCGCGTCGTCACCGTTCACAAGGTCAGGAAGAAGCGGAAAAACTGCGCGCGACTGCCGACTATGAAGTGACCAGAACGCTGGCAGAAGCTGAGCGTCAGGGCCGCATCATGCGTGGTGAAGGCGATGCCGAAGCAGCCAAA  >  NC_000913/4403850‑4404142

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 14 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 36 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.