BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	= 4603858	105 (1.210)	6 (0.070)	6/246	NT	5.4%	coding (382/726 nt)	yjjQ	putative transcriptional regulator
*	?	NC_000913	= 4603865	112 (1.350)	6 (0.070)	6/246	NT	5.4%	coding (389/726 nt)	yjjQ	putative transcriptional regulator

Only 100 of 130 total aligned reads displayed.

GGAAATTCACTGGGTTTTCATGGTGTCACGCTCCTGGTATTCCCAGGCAGTAGAACTGCTCATGTGCCCTACGGCGACGTTATTGTCTGATGTTGAACCCATTGAGAATCTGGTCAAGACCGTACGTTCCGGCAATACGCACGCAGAGCGTATCAGCGCCATGCTGACCTCCCCGGCAATGACTGAAACTCATGATTTTAGCTATCGCTCCGTCATTCTCACTCTTTCAGAGCGCAAGGTACTGCGGCTATTAGGTAAAGGATGGGGCATCAACCAGATAGCTTCATTGCTTAA  >  NC_000913/4603719‑4604012

ggAAATTCACTGGGTTTTCATGGTGTCACGCTCCTGGTATTCCCAGGCAGTAGAACTGCTCATGTGCCCTACGGCGACGTTATTGTCTGATGTTGAACCCATTGAGAATCTGGTCAAGACCGTACGTTCCGGCAATACGCACGCAGGGc                                                                                                                                                   >  3:281929/1‑149 (MQ=255)

ggAAATTCACTGGGTTTTCATGGTGTCACGCTCCTGGTATTCCCAGGCAGTAGAACTGCTCATGTGCCCTACGGCGACGTTATTGTCTGATGTTGAACCCATTGAGAATCTGGTCAAGACCGTACGTTCCGGCAATACGCACGCAGAgc                                                                                                                                                   >  2:266889‑M2/1‑147 (MQ=255)

ggAAATTCACTGGGTTTTCATGGTGTCACGCTCCTGGTATTCCCAGGCAGTAGAACTGCTCATGTGCCCTACGGCGACGTTATTGTCTGATGTTGAACCCATTGAGAATCTGGTCAAGACCGTACGTTCCGGCAATACGCACGCAGAgc                                                                                                                                                   <  2:19195‑M2/149‑3 (MQ=255)

 gAAATTCACTGGGTTTTCATGGTGTCACGCTCCTGGTATTCCCAGGCAGTAGAACTGCTCATGTGCCCTACGGCGACGTTATTGTCTGATGTTGAACCCATTGAGAATCTGGTCAAGACCGTACGTTCCGGCAATACGCACGCAGAgcg                                                                                                                                                  >  8:219969‑M2/1‑146 (MQ=255)

    aTTCACTGGCTTTTCATGGTGTCACGCTCCTCGTATTCCCAGGCCTTAGAACTGCTCATGTGCCCTACGGCGACGTTATTGGCTGATGTTGAACCCATTGAGAATCTGGTCAAGACCGTACGTTCCGGCAATACGCACGCAGAgcgtat                                                                                                                                               >  4:293163‑M2/1‑143 (MQ=255)

     ttCACTGGGTTTTCATGGTGTCACGCTCCTGGTATTCCCAGGCAGTAGAACTGCTCATGTGCCCTACGGCGACGTTATTGTCTGATGTTGAACCCATTGAGAATCTGGTCAAGACCGTACGTTCCGGCAATACGCACGCAGAGCGTATc                                                                                                                                              <  8:365920/149‑1 (MQ=255)

                ttCATGGTGTCACGCTCCTGGTATTCCCAGGCAGTAGAACTGCTCATGTGCCCTACGGCGACGTTATTGTCTGATGTTGAACCCATTGAGAATCTGGTCAAGACCGTACGTTCCGGCAATACGCACGCAGAGCGTATCAGCGCCATGc                                                                                                                                    <  1:134909/148‑1 (MQ=255)

                   aTGGTGTCACGCTCCTGGTATTCCCAGGCAGTAGAACTGCTCATGTGCCCTACGGCGACGTTATTGTCTGATGTTGAACCCATTGAGAATCTGGTCAAGACCGTACGTTCCGGCAATACGCACGCAGAGCGTATCAGCGCCATGCTAAc                                                                                                                                >  5:152639/1‑149 (MQ=255)

                     ggTGTCACGCGCCTGGTATTCCCAGGCAGTAGAACTGCTCATGTGCCCTACGGCGACGTTATTGTCTGATGTTGAACCCATTGAGAATCTGGTCAAGACCGTACGTTCCGGCAATACGCACGCAGAGCGTATCAGCGCCATGCTGACCt                                                                                                                              >  4:36341/1‑149 (MQ=255)

                         tCACGCTCCTGGTATTCCCAGGCAGTAGAACTGCTCATGTGCCCTACGGCGACGTTATTGTCTGATGTTGAACCCATTGAGAATCTGGTCAAGACCGTACGTTCCGGCAATACGCACGCAGAGCGTATCAGCGCCATGCTGACCTccc                                                                                                                           <  6:154235/148‑1 (MQ=255)

                              cTCCTGGTATTCCCAGGCAGTAGAACTGCTCATGTGCCCTACGGCGACGTTATTGTCTGATGTTGAACCCATTGAGAATCTGGTCAAGACCGTACGTTCCGGCAATACGCACGCAGAGCGTATCAGCGCCATGCTGACCTCCCCGGCaa                                                                                                                     <  1:249846/149‑1 (MQ=255)

                              cTCCTGGTATTCCCAGGCAGTAGAACTGCTCATGTGCCCTACGGCGACGTTATTGTCTGATGTTGAACCCATTGAGAATCTGGTCAAGACCGTACGTTCCGGCAATACGCACGCAGAGCGTATCAGCGCCATGCTGACCTCCCCGGCaa                                                                                                                     <  7:77996/149‑1 (MQ=255)

                               tCCTGGTATTCCCAGGCAGTAGAACTGCTCATGTGCCCTACGGCGACGTTATTGTCTGATGTTGAACCCATTGAGAATCTGGTCAAGACCGTACGTTCCGGCAATACGCACGCAGAGCGTATCAGCGCCATGCTGACCTCCCCGGCAAt                                                                                                                    >  4:363734/1‑149 (MQ=255)

                                 cTGGTATTCCCAGGCAGTAGAACTGCTCATGTGCCCTACGGCGACGTTATTGTCTGATGTTGAACCCATTGAGAATCTGGTCAAGACCGTACGTTCCGGCAATACGCACGCAGAGCGTATCAGCGCCATGCTGACCTCCCCGGCAATGa                                                                                                                  >  4:225660/1‑149 (MQ=255)

                                  tGGTATTCCCAGGCAGTAGAACTGCTCATGTGCCCTACGGCGACGTTATTGTCTGATGTTGAACCCATTGAGAATCTGGTCAAGACCGTACGTTCCGGCAATACGCACGCAGAGCGTATCAGCGCCATGCTGACCTCCCCGGCAATGAc                                                                                                                 >  4:150167/1‑149 (MQ=255)

                                     tATTCCCAGGCAGTAGAACTGCTCATGTGCCCTACGGCGACGTTATTGTCTGATGTTGAACCCATTGAGAATCTGGTCAAGACCGTACGTTCCGGCAATACGCTCTGCGTgcgtattgccggaacgtacggtcttgaccagattctcaa                                                                                                              <  5:114749‑M2/149‑40 (MQ=255)

                                       ttCCCAGGCAGTAGAACTGCTCATGTGCCCTACGGCGACGTTATTGTCTGATGTTGAACCCATTGAGAATCTGGTCAAGACCGTACGTTCCGGCAATACGCACGCAGAGCGTATCAGCGCCATGCTGACCTCCCCGGCAATGACTGaaa                                                                                                            >  2:199169/1‑149 (MQ=255)

                                       ttCCCAGGCAGTAGAACTGCTCATGTGCCCTACGGCGACGTTATTGTCTGATGTTGAACCCATTGAGAATCTGGTCAAGACCGTACGTTCCGGCAATACGCACGCAGAGCGTATCAGCGCCATGCTGACCTCCCCGGCAATGACTGaaa                                                                                                            <  3:306774/149‑1 (MQ=255)

                                       ttCCCAGGCAGTAGAACTGCTCATGTGCCCTACGGCGACGTTATTGTCTGATGTTGAACCCATTGAGAATCTGGTCAAGACCGTACGTTCCGGCAATACGCACGCAGAGCGTATCAGCGCCATGCTGACCTCCCCGGCAATGACTGaaa                                                                                                            <  8:132594/149‑1 (MQ=255)

                                          ccAGGCAGTAGAACTGCTCATGTGCCCTACGGCGACGTTATTGTCTGATGTTGAACCCATTGAGAATCTGGTCAAGACCGTACGTTCCGGCAATACGCACGCAGAGCGTATCAGCGCCATGCTGACCTCCCCGGCAATGACTGAAACt                                                                                                          >  3:184810/1‑148 (MQ=255)

                                          ccAGGCAGTAGAACTGCTCATGTGCCCTACGGCGACGTTATTGTCTGATGTTGAACCCATTGAGAATCTGGTCAAGACCGTACGTTCCGGCAATACGCACGCAGAGCGTATCAGCGCCATGCTGACCTCCCCGGCAATGACTGAAACTc                                                                                                         <  1:238873/149‑1 (MQ=255)

                                            aGGCAGTAGAACTGCTCATGTGCCCTACGGCGACGTTATTGTCTGATGTTGAACCCATTGAGAATCTGGTCAAGACCGTACGTTCCGGCAATACGCACGCAGAGCGTATCAGCGCCATGCTGAc                                                                                                                                >  1:286120/1‑124 (MQ=255)

                                            aGGCAGTAGAACTGCTCATGTGCCCTACGGCGACGTTATTGTCTGATGTTGAACCCATTGAGAATCTGGTCAAGACCGTACGTTCCGGCAATACGCACGCAGAGCGTATCAGCGCCATGCTGAc                                                                                                                                <  2:286120/124‑1 (MQ=255)

                                                aGTAGAACTGCTCATGTGCCCTACGGCGACGTTATTGTCTGATGTTGAACCCATTGAGAATCTGGTCAAGACCGTACGTTCCGGCAATACGCACGCAGAGCGTATCAGCGCCATGCTGACCTCCCCGGCAATGACTGAAACTCATg                                                                                                      >  7:87349/1‑146 (MQ=255)

                                                aGTAGAACTGCTCATGTGCCCTACGGCGACGTTATTGTCTGATGTTGAACCCATTGAGAATCTGGTCAAGACCGTACGTTCCGGCAATACGCACGCAGAGCGTATCAGCGCCATGCTGACCTCCCCGGCAATGACTGAAACTCATGAtt                                                                                                   >  3:345505/1‑149 (MQ=255)

                                                aGTAGAACTGCTCATGTGCCCTACGGCGACGTTATTGTCTGATGTTGAACCCATTGAGAATCTGGTCAAGACCGTACGTTCCGGCAATACGCACGCAGAGCGTATCAGCGCCATGCTGACCTCCCCGGCAATGACTGAAACTCATGAtt                                                                                                   >  2:384045/1‑149 (MQ=255)

                                                 gTAGAACTGCTCATGTGCCCTACGGCGACGTTATTGTCTGATGTTGAACCCATTGAGAATCTGGTCAAGACCGTACGTTCCGGCAATACGCACGCAGAGCGTATCAGCGCCATGCTGACCTCCCCGGCAATGACTGAAACTCATGAttt                                                                                                  <  3:363734/149‑1 (MQ=255)

                                                 gTAGAACTGCTCATGTGCCCTACGGCGACGTTATTGTCTGATGTTGAACCCATTGAGAATCTGGTCAAGACCGTACGTTCCGGCAATACGCACGCAGAGCGTATCAGCGCCATGCTGACCTCCCCGGCAATGACTGAAACTCATGAttt                                                                                                  >  1:113145/1‑149 (MQ=255)

                                                  tAGAACTGCTCATGTGCCCTACGGCGACGTTATTGTCTGATGTTGAACCCATTGAGAATCTGGTCAAGACCGTACGTTCCGGCAATACGCACGCAGAGCGTATCAGCGCCATGCTGACCTCCCCGGCAATGACTGAAACTCATGAttt                                                                                                  >  2:365267/1‑148 (MQ=255)

                                                    gAACTGCTCATGTGCCCTACGGCGACGTTTTTGTCTGATGTTGAACCCATTGAGAATCTGGTCAAGACCGTACGTTCCGGCAATACGCACGCAGAGCGTTTAAGCGCCATGGTGACGTACCCGGCAATGAGTGATCCTCATGAGTTTAg                                                                                               >  4:279505/1‑149 (MQ=255)

                                                    gAACTGCTCATGTGCCCTACGGCGACGTTATTGTCTGATGTTGAACCCATTGAGAATCTGGTCAAGACCGTACGTTCCGGCAATACGCACGCAGAGCGTATCAGCGCCATGCTGACCTCCCCGGCAATGACTGAAACTCATGATTTTa                                                                                                <  6:35336/148‑1 (MQ=255)

                                                          cTCATGTGCCCTACGGCGACGTTATTGTCTGATGTTGAACCCATTGAGAATCTGGTCAAGACCGTACGTTCCGGCAATACGCACGCAGAGCGTATCAGCGCCATGCTGACCTCCCCGGCAATGACTGAAACTCATGATTTTAGCTAt                                                                                           <  3:36341/147‑1 (MQ=255)

                                                          cTCATGTGCCCTACGGCGACGTTATTGTCTGATGTTGAACCCATTGAGAATCTGGTCAAGACCGTACGTTCCGGCAATACGCACGCAGAGCGTATCAGCGCCATGCTGACCTCCCCGGCAATGACTGAAACTCATGATTTTAGCTATCg                                                                                         >  5:313706/1‑149 (MQ=255)

                                                                 gCCCTACGGCGACGTTATTGTCTGATGTTGAACCCATTGAGAATCTGGTCAAGACCGTACGTTCCGGCAATACGCACGCAGAGCGTATCAGCGCCATGCTGACCTCCCCGGCAATGACTGAAACTCATGATTTTAGCTATCGCTCCGt                                                                                   >  8:18446/1‑148 (MQ=255)

                                                                    cTACGGCGACGTTATTGTCTGATGTTGAACCCATTGAGAATCTGGTCAAGACCGTACGTTCCGGCAATACGCACGCAGAGCGTATCAGCGCCATGCTGACCTCCCCGGCAATGACTGAAACTCATGATTTTAGCTATCGCTCCGTCAtt                                                                               >  1:196512/1‑149 (MQ=255)

                                                                    cTACGGCGACGTTATTGTCTGATGTTGAACCCATTGAGAATCTGGTCAAGACCGTACGTTCCGGCAATACGCACGCAGAGCGTATCAGCGCCATGCTGACCTCCCCGGCAATGACTGAAACTCATGATTTTAGCTATCGCTCCGTCAtt                                                                               >  1:45924/1‑149 (MQ=255)

                                                                    cTACGGCGACGTTATTGTCTGATGTTGAACCCATTGAGAATCTGGTCAAGACCGTACGTTCCGGCAATACGCACGCAGAGCGTATCAGCGCCATGCTGACCTCCCCGGCAATGACTGAAACTCATGATTTTAGCTATCGCTCCGTCAtt                                                                               >  7:184558/1‑149 (MQ=255)

                                                                     tACGGCGACGTTATTGTCTGATGTTGAACCCATTGAGAATCTGGTCAAGACCGTACGTTCCGGCAATACGCACGCAGAGCGTATCAGCGCCATGCTGACCTCCCCGGCAATGACTGAAACTCATGATTTTAGCTATCGCTCCGTCATtc                                                                              >  5:343502/1‑149 (MQ=255)

                                                                       cGGCGACGTTATTGTCTGATGTTGAACCCATTGAGAATCTGGTCAAGACCGTACGTTCCGGCAATACGCACGCAGAGCGTATCAGCGCCATGCTGACCTCCCCGGCAATGACTGAAACTCATGATTTTAGCTATCGCTCCGTCATtct                                                                             <  1:19195/148‑1 (MQ=255)

                                                                       cGGCGACGGTATTGTCTGATGTTGAACCCATTGAGAATCTGGTCAAGACCGTACGTTCCGGCAATACGCACGCAGAGCGTATCAGCGCCATGCTGACCTCCCCGGCAATGACTGAAACTCATGATTTTAGCTATCGCTCCGTCATtc                                                                              <  8:302654/147‑1 (MQ=255)

                                                                        ggCGACGTTATTGTCTGATGTTGAACCCATTGAGAATCTGGTCAAGACCGTACGTTCCGGCAATACGCACGCAGAGCGTATCAGCGCCATGCTGACCTCCCCGGCAATGACTGAAACTCATGATTTTAGCTATCGCTCCGTCATTCTCa                                                                           <  2:113145/149‑1 (MQ=255)

                                                                           gACGTTATTGTCTGATGTTGAACCCATTGAGAATCTGGTCAAGACCGTACGTTCCGGCAATACGCACGCAGAGCGTATCAGCGCCATGCTGACCTCCCCGGCAATGACTGAAACTCATGATTTTAGCTATCGCTCCGTCATTCTCActc                                                                        >  6:181311/1‑149 (MQ=255)

                                                                              gTTATTGTCTGATGTTGAACCCATTGAGAATCTGGTCAAGACCGTACGTTCCGGCAATACGCACGCAGAGCGTATCAGCGCCATGCTGACCTCCCCGGCAATGACTGAAACTCATGATTTTAGCTATCGCTCCGTCATTCTCACTCttt                                                                     <  3:150167/149‑1 (MQ=255)

                                                                                tATTGTCTGATGTTGAACCCATTGAGAATCTGGTCAAGACCGTACGTTCCGGCAATACGCACGCAGCgggtattggcggaacgtacgggattggccagattctgaatggggtcctcatcagacaataacgtagccggagggcgcatgag                                                                   <  6:114749‑M2/149‑83 (MQ=255)

                                                                                  ttGTCTGATGTTGAACCCATTGAGAATCTGGTCAAGACCGTACGTTCCGGCAATACGCACGCAGAGCGTATCAGCGCCATGCTGACCTCCCCGGCAATGACTGAAACTCATGATTTTAGCTATCGCTCCGTCATTCTCACTCTTTCaga                                                                 <  7:113223/149‑1 (MQ=255)

                                                                                  ttGTCTGATGTTGAACCCATTGAGAATCTGGTCAAGACCGTACGTTCCGGCAATACGCACGCAGAGCGTATCAGCGCCATGCTAACCTCCCCGGCAATGACTGAAACTCATGATTTTAGCTATCGCTCCGTCATTCTCACTCTTTCaga                                                                 <  6:152639/149‑1 (MQ=255)

                                                                                    gTCTGATGTTGAACCCATTGAGAATCTGGTCAAGACCGTACGTTCCGGCAATACGCACGCAGAGCGTATCAGCGCCATGCTGACCTCCCCGGCAATGACTGAAACTCATGATTTTAGCTATCGCTCCGTCATTCTCACTCTTTCAGAgc                                                               >  3:135592/1‑149 (MQ=255)

                                                                                     tCTGATGTTGAACCCATTGAGAATCTGGTCAAGACCGTACGTTCCGGCAATACGCACGCAGAGCGTATCAGCGCCATGCTGACCTCCCCGGCAATGACTGAAACTCATGATTTTAGCTATCGCTCCGTCATTCTCACTCTTTCAGAgcg                                                              >  3:62297/1‑149 (MQ=255)

                                                                                     tCTGATGTTGAACCCATTGAGAATCTGGTCAAGACCGTACGTTCCGGCAATACGCACGCAGAGCGTATCAGCGCCATGCTGACATCCCCGGCAATGACTGAAACTCATGATTTTAGCTATCGCTCCGTCATTCTCACTCTTTCAGAgcg                                                              >  5:283155/1‑149 (MQ=255)

                                                                                       tGATGTTGAACCCATTGAGAATCTGGTCAAGACCGTACGTTCCGGCAATACGCACGCAGAGCGTATCAGCGCCATGCTGACCTCCCCGGCAATGACTGAAACTCATGATTTTAGCTATCGCTCCGTCATTCTCACTCTTTCAGAgcgc                                                             >  7:129758/1‑148 (MQ=255)

                                                                                        gATGTTGAACCCATTGAGAATCTGGTCAAGACCGTACGTTCCGGCAATACGCACGCAGAGCGTATCAGCGCCATGCTGACCTCCCCGGCAATGACTGAAACTCATGATTTTAGCTATCGCTCCGTCATTCTCACTCTTTc                                                                    <  6:361425/140‑1 (MQ=255)

                                                                                            ttGAACCCATTGAGAATCTGGTCAAGACCGTACGTTCCGGCAATACGCACGCAGAGCGTATCAGCGCCATGCTGACCTCCCCGGCAATGACTGAAACTCATGATTTTAGCTATCGCTCCGTCATTCTCACTCTTTCAGAGCGCAAg                                                          <  2:371466/146‑1 (MQ=255)

                                                                                            ttGAACCCATTGAGAATCTGGTCAAGACCGTACGTTCCGGCAATACGCACGCAGAGCGTATCAGCGCCATGCTGACCTCCCCGGCAATGACTGAAACTCATGATTTTAGCTATCGCTCCGTCATTCTCACTCTTTCAGAGCGCAAg                                                          >  1:371466/1‑146 (MQ=255)

                                                                                                  ccATTGAGAATCTGGTCAAGACCGTACGTTCCGGCAATACGCACGCAGAGCGTATCAGCGCCATGCTGACCTCCCCGGCAATGTCTGAAACTCATGATTTTAGCTATCGCTCCGTCATTCTCACTCTTTCAGAGCGCAAGGTACTGCgg                                                 >  7:164043/1‑149 (MQ=255)

                                                                                                   cATTGAGAATCTGGTCAAGACCGTACGTTCCGGCAATACGCACGCAGAGCGTATCAGCGCCATGCTGACCTCCCCGGCAATGACTGAAACTCATGATTTTAGCTATCGCTCCGTCATTCTCACTCTTTCAGAGCGCAAGGTACTGCGGc                                                <  7:18446/149‑1 (MQ=255)

                                                                                                      tGAGAATCTGGTCAAGACCGTACGTTCCGGCAATACGCACGCAGAGCGTATCAGCGCCATGCTGACCTCCCCGGCAATGACTGAAACTCATGATTTTAGCTATCGCTCCGTCATTCTCACTCTTTCAGAgc                                                               <  6:326133/131‑1 (MQ=255)

                                                                                                      tGAGAATCTGGTCAAGACCGTACGTTCCGGCAATACGCACGCAGAGCGTATCAGCGCCATGCTGACCTCCCCGGCAATGACTGAAACTCATGATTTTAGCTATCGCTCCGTCATTCTCACTCTTTCAGAgc                                                               >  5:326133/1‑131 (MQ=255)

                                                                                                         gaATCTGGTCAAGACCGTACGTTCCGGCAATACGCACGCAGAGCGTATCAGCGCCATGCTGACCTCCCCGGCAATGACTGAAACTCATGATTTTAGCTATCGCTCCGTCATTCTCACTCTTTCAGAGCGCAAGGTACTGCGGCTAt                                             >  2:84641/1‑146 (MQ=255)

                                                                                                         gaATCTGGTCAAGACCGTACGTTCCGGCAATACGCACGCAGAGCGTATCAGCGCCATGCTGACCTCCCCGGCAATGACTGAAACTCATGATTTTAGCTATCGCTCCGTCATTCTCACTCTTTCAGAGCGCAAGGTACTGCGGCTATTa                                           <  1:84641/148‑1 (MQ=255)

                                                                                                         gaATCTGGTCAAGACCGTACGTTCCGGCAATACGCACGCAGAGCGTATCAGCGCCATGCTGACCTCCCCGGCAATGACTGAAACTCATGATTTTAGCTATCGCTCCGTCATTCTCACTCTTTCAGAGCGCAAGGTACTGCGGCTATTAg                                          <  4:359408/149‑1 (MQ=255)

                                                                                                         gaATCTGGTCAAGACCGTACGTTCCGGCAATACGCACGCAGAGCGTATCAGCGCCATGCTGACCTCCCCGGCAATGACTGAAACTCATGATTTTAGCTATCGCTCCGTCATTCTCACTCTTTCAGAGCGCAAGGTACTGCGGCTATTAg                                          >  8:329568/1‑149 (MQ=255)

                                                                                                          aaTCTGGTCAAGACCGTACGTTCCGGCAATACGCACGCAGAGCGTATCAGCGCCATGCTGACCTCCCCGGCAATGACTGAAACTCATGATTTTAGCTATCGCTCCGTCATTCTCACTCTTTCAGAGCGCAAGGTACTGCGGCTATTAgg                                         <  1:365267/149‑1 (MQ=255)

                                                                                                            tCTGGTCAAGACCGTACGTTCCGGCAATACGCACGCAGAGCGTATCAGCGCCATGCTGACCTCCCCGGCAATGACTGAAACTCATGATTTTAGCTATCGCTCCGTCATTCTCACTCTTTCAGAGCGCAAGGTACTGCGGCTATTAGGt                                        >  5:144043/1‑148 (MQ=255)

                                                                                                             cTGGTCAAGACCGTACGTTCCGGCAATACGCACGCAGAGCGTATCAGCGCCATGCTGACCTCCCCGGCAATGACTGAAACTCATGATTTTAGCTATCGCTCCGTCATTCTCACTCTTTCAGAGCGCAAGGTACTGCGGCTATTAGGTa                                       >  5:216952/1‑148 (MQ=255)

                                                                                                                gTCAAGACCGTACGTTCCGGCAATACGCACGCAGAGCGTATCAGCGCCATGCTGACCTCCCCGGCAATGACTGAAACTCATGATTTTAGCTATCGCTCCGTCATTCTCACTCTTTCAGAGCGCAAGGTACTGCGGCTATTAGGTAAAg                                    >  3:315243/1‑148 (MQ=255)

                                                                                                                 tCAAGACCGTACGTTCCGGCAATACGCACGCAGAGCGTATCAGCGCCATGCTGACCTCCCCGGCAATGACTGAAACTCATGATTTTAGCTATCGCTCCGTCATTCTCACTCTTTCAGAGCGCAAGGTACTGCGGCTATTAGGTAAAGGa                                  >  2:407058/1‑149 (MQ=255)

                                                                                                                   aaGACCGTATGTTCCGGCAATACGCACGCAGAGCGTATCAGCGCCATGCTGACCTCCCCGGCAATGACTGAAACTCATGATTTTAGCTATCGCTCCGTCATTCTCACTCTTTCAGAGCGCAAGGTACTGCGGCTATTAGGTAAAGGATg                                >  4:104365/1‑149 (MQ=255)

                                                                                                                   aaGACCGTACGTTCCGGCAATACGCACGCAGAGCGTATCAGCGCCATGCTGACGTCCCCGGCAATGACTGAAACTCATGATTTTAGCTATCGCTCCGTCATTCTCACTCTTTCAGAGCGCAAGGTACTGCGGCTATTAGGTAAAGGATg                                <  6:283155/149‑1 (MQ=255)

                                                                                                                   aaGACCGTACGTTCCGGCAATACGCACGCAGAGCGTATCAGCGCCATGCTGACCTCCCCGGCAATGACTGAAACTCATGATTTTAGCTATCGCTCCGTCATTCTCACTCTTTCAGAGCGCAAGGTACTGCGGCTATTAGGTAAAGGATg                                <  1:47183/149‑1 (MQ=255)

                                                                                                                   aaGACCGTACGTTCCGGCAATACGCACGCAGAGCGTATCAGCGCCATGCTGACCTCCCCGGCAATGACTGAAACTCATGATTTTAGCTATCGCTCCGTCATTCTCACTCTTTCAGAGCGCAAGGTACTGCGGCTATTAGGTAAAGGATg                                <  3:225660/149‑1 (MQ=255)

                                                                                                                    aGACCGTACGTTCCGGCAATACGCACGCAGAGCGTATCAGCGCCATGCTGACCTCCCCGGCAATGACTGAAACTCATGATTTTATCTATCGCTCCGTCATTCTCACTCTTTCAGAGCGCAAGGTACTGCGGCTATTAGGTAAAGGATgg                               >  3:114740/1‑149 (MQ=255)

                                                                                                                    aGACCGTACGTTCCGGCAATACGCACGCAGAGCGTATCAGCGCCATGCTGACCTCCCCGGCAATGACTGAAACTCATGATTTTAGCTATCGCTCCGTCATTCTCACTCTTTCAGAGCGCAAGGTACTGCGGCTATTAGGTAAAgg                                   <  7:121763/145‑1 (MQ=255)

                                                                                                                    aGACCGTACGTTCCGGCAATACGCACGCAGAGCCTATCAGCGCCATGCTGACCTCCCCGGCAATGACTGAAACTCATGATTTTAGCTATCGCTCCGTCATTCTCACTCTTTCAGAGCGCAAGGTACTGCGGCTATTAGGTAAAgg                                   >  8:121763/1‑145 (MQ=255)

                                                                                                                      aCCGTACGTTCCGGCAATACGCACGCAGAGCGTATCAGCGCCATGCTGACCTCCCCGGCAATGACTGAAACTCATGATTTTAGCTATCGCTCCGTCATTCTCACTCTTTCAGAGCGCAAGGTACTGCGGCTATTAGGTAAAGGATgggg                             <  8:129758/149‑1 (MQ=255)

                                                                                                                       ccGTACGTTCCGGCAATACGCACGCAGAGCGTATCAGCGCCATGCTGACCTCCCCGGCAATGACTGAAACTCATGATTTTAGCTATCGCTCCGTCATTCTCACTCTTTCAGAGCGCAAGGTACTGCGGCTATTAGGTAAAGGATGGGGc                            <  2:328049/149‑1 (MQ=255)

                                                                                                                        cGTACGTTCCGGCAATACGCACGCAGAGCGTATCAGCGCCATGCTGACCTCCCCGGCAATGACTGAAACTCATGATTTTAGCTATCGCTCCGTCATTCTCACTCTTTCAGAGCGCAAGGTACTGCGGCTATTAGGTAAAGGATGGGGCa                           >  7:72534/1‑149 (MQ=255)

                                                                                                                        cGTACGTTCCGGCAATACGCACGCAGAGCGTATCAGCGCCATGCTGACCTCCCCGGCAATGACTGAAACTCATGATTTTAGCTATCGCTCCGTCATTCTCACTCTTTCAGAGCGCAAGGTACTGCGGCTATTAGGTAAAGGATGGGGCa                           <  3:143093/149‑1 (MQ=255)

                                                                                                                          tACGTTCCGGCAATACGCACGCAGAGCGTATCAGCGCCATGCTGACCTCCCCGGCAATGACTGAAACTCATGATTTTAGCTATCGCTCCGTCATTCTCACTCTTTCAGAGCGCAAGGTACTGCGGCTATTAGGTAAAGGATGGGGCAt                          >  5:3732/1‑148 (MQ=255)

                                                                                                                           aCGTTCCGGCAATACGCACGCAGAGCGTATCAGCGCCATGCTGACCTCCCCGGCAATGACTGAAACTCATGATTTTAGCTATCGCTCCGTCATTCTCACTCTTTCAGAGCGCAAGGTACTGCGGCTATTAGGTAAAGGATGGGGCATc                         >  5:198555/1‑148 (MQ=255)

                                                                                                                             gTTCCGGCAATACGCACGCAGAGCGTATCAGCGCCATGCTGACCTCCCCGGCAATGACTGAAACTCATGATTTTAGCTATCGCTCCGTCATTCTCACTCTTTCAGAGCGCAAGGTACTGCGGCTATTAGGTAAAGGATGGGGCATCAAc                      >  2:98121/1‑149 (MQ=255)

                                                                                                                                  ggCAATACGCACGCAGAgcgtattgccggaacgtacggtcttgaccagattctcaatgggttc                                                                                                       <  8:119175‑M2/63‑47 (MQ=255)

                                                                                                                                  ggCAATACGCACGCAGAgcgtattgccggaacgtacggtcttgaccagattctcaatgggttc                                                                                                       >  7:119175‑M2/1‑17 (MQ=255)

                                                                                                                                  ggCAATACGCACGCAGAGCGTATCAGCGCCATGCTGACCTCCCCGGCAATGACTGAAACTCATGATTTTAGCTATCGCTCCGTCATTCTCACTCTTTCAGAGCGCAAGGTACTGCGGCTAtt                                            <  1:337887/122‑1 (MQ=255)

                                                                                                                                  ggCAATACGCACGCAGAGCGTATCAGCGCCATGCTGACCTCCCCGGCAATGACTGAAACTCATGATTTTAGCTATCGCTCCGTCATTCTCACTCTTTCAGAGCGCAAGGTACTGCGGCTAtt                                            >  2:337887/1‑122 (MQ=255)

                                                                                                                                   gCAATACGCACGCAGAgcgtattgccggaacgtacggtcttgaccagattctcaatgggttcaacatcagacaataacgtcgccgtagggcacatgagcagttctactg                                                        >  3:230657‑M2/1‑16 (MQ=255)

                                                                                                                                   gCAATACGCACGCAGAgcgtattgccggaacgtacggtcttgaccagattctcaatgggttcaacatcagacaataacgtcgccgtagggcacatgagcagttctactg                                                        <  4:230657‑M2/109‑94 (MQ=255)

                                                                                                                                   gCAATACGCACGCAGAGCGTATCAGCGCCATGCTGACCTCCCCGGCAATGACTGAAACTCATGATTTTAGCTATCGCTCCGTCATTCTCACTCTTTCAGAGCGCAAGGTACTGCGGCTATTAGGTAAAGGATGGGGCATCAACCAGATa                <  6:3732/149‑1 (MQ=255)

                                                                                                                                        acgcacgcAGAGCGTATCAGCGCCATGCTGACCTCCCCGGCAATGACTGAAACTCATGATTTTAGCTATCGCTCCGTCATTCTCACTCTTTCAGAGCGCAAGGTACTGCGGCTATTAGGTaaa                                     >  3:247415/1‑123 (MQ=255)

                                                                                                                                        acgcacgcAGAGCGTATCAGCGCCATGCTGACCTCCCCGGCAATGACTGAAACTCATGATTTTAGCTATCGCTCCGTCATTCTCACTCTTTCAGAGCGCAAGGTACTGCGGCTATTAGGTaaa                                     <  4:247415/123‑1 (MQ=255)

                                                                                                                                         cgcacgcaGAGCGTATCAGCGCCATGCTGACCTCCCCGGCAATGACTGAAACTCATGATTTTAGCTATCGCTCCGTCATTCTCACTCTTTCAGAGCGCAAGGTACTGCGGCTATTAGGTAAAGGATGGGGCATCAACCAGATAGCTTc           <  6:313706/148‑1 (MQ=255)

                                                                                                                                         cgcacgcaGAGCGTATCAGCGCCATGCTGACCTCCCCGGCAATGACTGAAACTCATGATTTTAGCTATCGCTCCGTCATTCTCACTCTTTCAGAGCGCAAGGTACTGCGGCTATTAGGTAAAGGATGGGGCATCAACCAGATAGCTTCa          <  4:315243/149‑1 (MQ=255)

                                                                                                                                          gcacgcaGAGCGTATCAGCGCCATGCTGACCTCCCCGGCAATGACTGAAACTCATGATTTTAGCTATCGCTCCGTCATTCTCACTCTTTCAGAGCGCAAGGTACTTCGGCTATTAGGTAAAGGATGGTGCATCAACCAGATAGCTTCAt         >  4:193033/1‑149 (MQ=255)

                                                                                                                                          gcacgcaGAGCGTATCAGCGCCATGCTGACCTCCCCGGCAATGACTGAAACTCATGATTTTAGCTATCGCTCCGTCATTCTCACTCTTTCAGAGCGCAAGGTACTGCGGCTATTAg                                          <  2:399532/116‑1 (MQ=255)

                                                                                                                                          gcacgcaGAGCGTATCAGCGCCATGCTGACCTCCCCGGCAATGACTGAAACTCATGATTTTAGCTATCGCTCCGTCATTCTCACTCTTTCAGAGCGCAAGGTACTGCGGCTATTAg                                          >  1:399532/1‑116 (MQ=255)

                                                                                                                                          gcacgcaGAGCGTATCAGCGCCATGCTGACCTCCCCGGCAATGACTGAAACTCATGATTTTAGCTATCGCTCCGTCATTCTCACTCTTTCAGAGCGCAAGGTACTGCGGCTATTAGGTAAAGGATGGGGCATCAACCAGATAGCTTCAt         >  2:275192/1‑149 (MQ=255)

                                                                                                                                              gcaGAGCTTATCAGCGCCATGCTGACATCCCCGGCAATGACTGAAAATCATGATTTTAGCTATCGCTCCGTCATTCTCACTCTTTCAGAGCGCAAGGTACTGCGGCTATTAGGTAAATGATGTGCCAACAACCACATAGCTTCATTGCt     >  8:212260/1‑149 (MQ=255)

                                                                                                                                              gcaGAGCGTATCAGCGCCATGCTGACCTCCCCGGCAATGACTGAAACTCATGATTTTAGCTATCGCTCCGTCATTCTCACTCTTTCAGAGCGCAAGGTACTGCGGCTATTAGGTAAAGGATGGGGCATCAACCAGATAGCTTCATTGCt     >  5:269351/1‑149 (MQ=255)

                                                                                                                                                agagCGTATCAGCGCCATGCTGACCTCCCCGGCAATGACTGAAACTCATGATTTTAGCTATCGCTCCGTCATTCTCACTCTTTCAGAGCGCAAGGTACTGc                                                   <  5:61990/101‑1 (MQ=255)

                                                                                                                                                 gagCGTATCAGCGCCATGCTGACCTCCCCTGCAATGACTGAAACTCATGATTTTAGCTATCGCTCCGTCATTCTCACTCTTTCAGAGCGCAAGGTACTGCGGCTATTAGGTAAAGGATGGGGCATCAACCAGATAGCTTCATTGCTTaa  <  4:114740/149‑1 (MQ=255)

                                                                                                                                                 gagCGTATCAGCGCCATGCTGACCTCCCCGGCAATGACTGAAACTCATGATTTTAGCTATCGCTCCGTCATTCTCACTCTTTCAGAGCGCAAGGTACTGCGGCTATTAGGTAAAGGATGGGGCATCAACCAGATAGCTTCATTGCtt    >  5:363572/1‑147 (MQ=255)

GGAAATTCACTGGGTTTTCATGGTGTCACGCTCCTGGTATTCCCAGGCAGTAGAACTGCTCATGTGCCCTACGGCGACGTTATTGTCTGATGTTGAACCCATTGAGAATCTGGTCAAGACCGTACGTTCCGGCAATACGCACGCAGAGCGTATCAGCGCCATGCTGACCTCCCCGGCAATGACTGAAACTCATGATTTTAGCTATCGCTCCGTCATTCTCACTCTTTCAGAGCGCAAGGTACTGCGGCTATTAGGTAAAGGATGGGGCATCAACCAGATAGCTTCATTGCTTAA  >  NC_000913/4603719‑4604012

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 14 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 36 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.