New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 3739543133 (2.630)6 (0.130) 5/236 5.6 4.7% intergenic (+16/‑162) malS/avtA alpha‑amylase/valine‑pyruvate aminotransferase; transaminase C; alanine‑valine transaminase
?NC_000913 = 3739556 122 (2.620)intergenic (+29/‑149) malS/avtA alpha‑amylase/valine‑pyruvate aminotransferase; transaminase C; alanine‑valine transaminase
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

Only 100 of 133 total aligned reads displayed.

AGCCAGTTCCGCGCCCGCCATCCCGCAATTGGCGCGGGCAAACAAACGACACTTTTGCTGAAGCAGGGCTACGGCTTTGTTCGTGAGCATGGCGACGATAAAGTGCTGGTCGTCTGGGCAGGGCAACAGTAACTTTTCCGGCTTCCCGTTCGTCAGTACCTCGGGAAGCCGCCAACCAGGATAAAATGTCAGCCCTAATCAGCGTTGCAGGATAAAGCACCGCTCACTCTTCAACAGACCGATTTGCACCCCAGCAAATGTAGCGTTATTGTTACCTTCCTTGCTACAGAGTTCG  >  NC_000913/3739396‑3739690
                                                                                                                                                   |                                                                                                                                                   
aGCCAGTTCCGCGCCCGCCATCCCGCAATTGGCGCGGGCAAACAAACGACACTTTTGCTGAAGCAGGGCTACGGCTTTGTTCGTGAGCATGGCGACGATAAAGTGCTGGTCGTCTGGGCAGGGCAACAGTAACTTTTCCGGCTTCCCGt                                                                                                                                                    >  1:256376/1‑149 (MQ=255)
     gTTCCGCGCCCGCCATCCCGCAATTGGCGCGGGCAAACAAACGACACTTTTGCTGAAGCAGGGCTACGGCTTTGTTCGTGAGCATGGCGACGATAAAGTGCTGGTCGTCTGGGCAGGGCAACAGTAACTTTTCCGGCTTCCCGTTCGTc                                                                                                                                               <  2:256376/149‑1 (MQ=255)
      ttCCGCGCCCGCCATCCCGCAATTGGCGCGGGCAAACAAACGACACTTTTGCTGAAGCAGGGCTACGGCTTTGTTCGTGAGCATGGCGACGATAAAGTGCTGGTCGTCTGGGCAGGGCAACAGTAACTTTTCCGGCTTCCCGTTCGTCa                                                                                                                                              <  3:38963/149‑1 (MQ=255)
        ccGCGCCCGCCATCCCGCAATTGGCGCGGGCAAACAAACGACACTTTTGCTGAAGCAGGGCTACGGCTTTGTTCGTGAGCATGGCGACGATAAAGTGCTGGTCGTCTGGGCAGGGCAACAGTAACTTTTCCGGCTTCCCGTTCGTCAg                                                                                                                                             <  3:179187/148‑1 (MQ=255)
                    tCCCGCAATTGGCGCGGGCAAACAAACGACACTTTTGCTGAAGCAGGGCTACGGCTTTGTTCGTGAGCATGGCGACGATAAAGTGCTGGTCGTCTGGGCAGGGCAACAGTAACTTTTCCGGCTTCCCGTTCGTCAGTACCTCGGGAAgc                                                                                                                                <  1:5176/149‑1 (MQ=255)
                        gCAATTGGCGCGGGCAAACAAACGACACTTTTGCTGAAGCAGGGCTACGGCTTTGTTCGTGAGCATGGCGACGATAAAGTGCTGGTCGTCTGGGCAGGGCAACAGTAACTTTTCCGGCTTCCCGTTCGTCa                                                                                                                                              >  1:83768/1‑131 (MQ=255)
                        gCAATTGGCGCGGGCAAACAAACGACACTTTTGCTGAAGCAGGGCTACGGCTTTGTTCGTGAGCATGGCGACGATAAAGTGCTGGTCGTCTGGGCAGGGCAACAGTAACTTTTCCGGCTTCCCGTTCGTCAGTACCTCGGGAAgccgcc                                                                                                                            <  3:53347/149‑1 (MQ=255)
                          aaTTGGCGCGGGCAAACAAACGACACTTTAGCTGAAGCAGGGCTCCGGCTTTGTTCGGGAGCATGGCGACGATAAAGTGCTGGTCGTCTGGGCAGGGCAACAGTACCTATTCCGGCTTCCCGTTCGTCAGTCCCTCGGGAAGCCGCCac                                                                                                                          >  7:111164/1‑148 (MQ=255)
                           aTTGGCGCGGGCAAACAAACGACACTTTTGCTGAAGCAGGGCTACGGCTTTGTTCGTGAGCATGGCGACGATAAAGTGCTGGTCGTCTGGGCAGGGCAACAGTAACTTTTCCGGCTTCCCGTTCGTCAGTACCTCGGGAAGCCGCCAAc                                                                                                                         <  8:178085/149‑1 (MQ=255)
                                 gcgGGCAAACAAACGACACTTTTGCTGAAGCAGGGCTACGGCTTTGTTCGTGAGCATGGCGACGATAAAGTGCTGGTCGTCTGGGCAGGGCAACAGTAACTTTTCCGGCTTCCCGTTCGTCAGTACCTCGGGAAGCCGCCAACCAGGa                                                                                                                    >  5:38892/1‑148 (MQ=255)
                                       aaacaaacGACACTTTTGCTGAAGCAGGGCTATGGCTTTGTTCGTGAGCATGGCGACGATAAAGTGCTGGTCGTCTGGGCAGGGCAACAGTAACTTTTCCGGCTTCCCGTTCGTCa                                                                                                                                              <  3:13244/116‑1 (MQ=255)
                                       aaacaaacGACACTTTTGCTGAAGCAGGGCTACGGCTTTGTTCGTGAGCATGGCGACGATAAAGTGCTGGTCGTCTGGGCAGGGCAACAGTAACTTTTCCGGCTTCCCGTTCGTCAGTACCTCGGGAAGCCGCCAACCAGGATaaaa                                                                                                               <  8:60887/147‑1 (MQ=255)
                                       aaacaaacGACACTTTTGCTGAAGCAGGGCTACGGCTTTGTTCGTGAGCATGGCGACGATAAAGTGCTGGTCGTCTGGGCAGGGCAACAGTAACTTTTCCGGCTTCCCGTTCGTCAGTACCTCGGGAAGCCGCCAACCAGGATaaaa                                                                                                               >  7:60887/1‑147 (MQ=255)
                                       aaacaaacGACACTTTTGCTGAAGCAGGGCTACGGCTTTGTTCGTGAGCATGGCGACGATAAAGTGCTGGTCGTCTGGGCAGGGCAACAGTAACTTTTCCGGCTTCCCGTTCGTCAGTACCTCGGGAAGCCGCCAACCAGGATAAAATg                                                                                                             >  4:180507/1‑149 (MQ=255)
                                       aaacaaacGACACTTTTGCTGAAGCAGGGCTAAGGCTTTGTTCGTGAGCATGGCGACGATAAAGTGCTGGTCGTCTGGGCAGGGCAACAGTAACTTTTCCGGCTTCCCGTTCGTCa                                                                                                                                              >  4:13244/1‑116 (MQ=255)
                                        accaaacGACACTTTTGCTGAAGCAGGGCTACGGCTTTGTTCGTGAGCATGGCGACGATAAAGTGCTGGTCGTCTGGGCAGGGCAACAGTAACTTTTCCGGCTTCCCGTTCGTCAGt                                                                                                                                            >  7:88503/3‑117 (MQ=255)
                                        aacaaacGACACTTTTGCTGAAGCAGGGCTACGGCTTTGTTCGTGAGCATGGCGACGATAAAGTGCTGGTCGTCTGGGCAGGGCAACAGTAACTTTTCCGGCTTCCCGTTCGTCAGt                                                                                                                                            <  8:88503/117‑1 (MQ=255)
                                           aaacGACACTTTTGCTGAAGCAGGGCTACGGCTTTGTTCGTGAGCATGGCGACGATAAAGTGCTGGTCGTCTGGGCAGGGCAACAGTAACTTTTCCGGCTTCCCGTTCGTCAGTACCTCGGGAAGCCGCCAACCAGGATAAAAt                                                                                                              <  1:67421/144‑1 (MQ=255)
                                           aaacGACACTTTTGCTGAAGCAGGGCTACGGCTTTGTTCGAGAGCATGGCGACGATAAAGTGATCGTCGTCTTGGCATGGCAACACTAACTTTTCCGGCTTCCCGATCGTAAGTACCTCTGGAAGCCGCCAACCAGGAAAAAAt                                                                                                              >  2:67421/1‑144 (MQ=255)
                                             acGACACTTTTGCTGAAGCAGGGCTACGGCTTTGTTCGTGAGCATGGCGACGATATAGTGCTGGTCGTCTGGGCAGGGCAACAGTAACTTTTCCGGCTTCCCGTTCGTCAGTACCTCGGGAAGCCGCCACCCAGGATAAACTGTCAGcc                                                                                                       <  8:111164/149‑1 (MQ=255)
                                             acGACACTTTTGCTGAAGCAGGGCTACGGCTTTGTTCGTGAGCATGGCGACGATAAAGTGCTGGTCGTCTGGGCAGGGCAACAGTAACTTTTCCGGCTTCCCGTTCGTCAGTACCTCGGGaa                                                                                                                                  >  4:31204/1‑122 (MQ=255)
                                             acGACACTTTTGCTGAAGCAGGGCTACGGCTTTGTTCGTGAGCATGGCGACGATAAAGTGCTGGTCGTCTGGGCAGGGCAACAGTAACTTTTCCGGCTTCCCGTTCGTCAGTACCTCGGGaa                                                                                                                                  <  3:31204/122‑1 (MQ=255)
                                                 cacTTTTGCTGAAGCAGGGCTACGGCTTTGTTCGTGAGCATGGCGACGATAAAGTGCTGGTCGTCTGGGCAGGGCAACAGTAACTTTTCCGGCTTCCCGTTCGTCAGTACCTc                                                                                                                                       >  4:181521/1‑113 (MQ=255)
                                                 cacTTTTGCTGAAGCAGGGCTACGGCTTTGTTCGTGAGCATGGCGACGATAAAGTGCTGGTCGTCTGGGCAGGGCAACAGTAACTTTTCCGGCTTCCCGTTCGTCAGTACCTc                                                                                                                                       <  3:181521/113‑1 (MQ=255)
                                                   cTTTTGCTGAAGCAGGGCTACGGCTTTGTTCGTGAGCATGGCGACGATAAAGTGCTGGTCGTCTGGGCAGGGCAACAGTAACTTTTCCGGCTTCCCGTTCGTCAGTACCTCGGGAAGCCGCCAACCAGGATAAAATGTCAGCCCTAATc                                                                                                 <  2:175159/149‑1 (MQ=255)
                                                    ttttGCTGAAGCAGGGCTACGGCTTTGTTCGTGAGCATGGCGACGATAAAGTGCTGGTCGTCTGGGCAGGGCAACAGTAACTTTTCCGGCTTCCCGTTCGTCAGTACCTCGGGAAGCCGCCAACCAGGATAAAATGTCAGCCCTAAt                                                                                                  >  1:196300/1‑147 (MQ=255)
                                                    ttttGATGAAGCAGTGCTACGGCTTTGTTCGTGAGCATGGCGACGATAAAGTGCTGGTAGTCTGGGCATGGAAACATTAACTTTTCCGGCTTCAAGTTCGTCAGTACCTCGGTAAGCCGCCAAACAGGATAAAATGTCAGCACTAAt                                                                                                  >  8:15492/1‑147 (MQ=255)
                                                        gCTGAAGCAGGGCTACGGCTTTGTTCGTGAGCATGGCGACGATAAAGTGCTGGTCGTCTGGGCAGGGCAACAGTAACTTTTCCGGCTTCCCGTTCGTCAGTACCTCGGGAAGCCGCCAACCAGGATAAAATGTCAGCCCTAATCAGCg                                                                                             <  6:38892/148‑1 (MQ=255)
                                                               cAGGGCTACGGCTTTGTTCGTGAGCATGGCGACGATAAAGTGCTGGTCGTCTGGGCAGGGCAACAGTAACTTTTCCGGCTTCCCGTTCGTCAGTACCTCGGGAAGCCGCCAACCAGGATAAAATGTCAGCCCTAATCAGCGTTGCAGGa                                                                                     <  1:122946/149‑1 (MQ=255)
                                                               cAGGGCTACGGCTTTGTTCGTGAGCATGGCGACGATAAAGTGCTGGTCGTCTGGGCAGGGCAACAGTAACTTTTCCGGCTTCCCGTTCGTCAGTACCTCGGGAAGCCGCCAACCAGGATAAAATGCCAGCCCTAATCAGCGTTGCAGGa                                                                                     <  2:5553/149‑1 (MQ=255)
                                                                 gggCTACGGCTTTGTTCGTGAGCATGGCGACGATAAAGTGCTGGTCGTCTGGGCAGGGCAACAGTAACTTTTCCGGCTTCCCGTTCGTCAGTACCTCGGGAAGCCGCCAACCAGGATAAAATGTCAGCCCTAATCAGCGTTGCAg                                                                                       <  2:267019/145‑1 (MQ=255)
                                                                 gggCTACGGCTTTGTTCGTGAGCATGGCGACGATAAAGTGCTGGTCGTCTGGGCAGGGCAACAGTAACTTTTCCGGCTTCCCGTTCGTCAGTACCTCGGGAAGCCGCCAACCAGGATAAAATGTCAGCCCTAATCAGCGTTGCAg                                                                                       >  1:267019/1‑145 (MQ=255)
                                                                   gCTACGGCTTTGTTCGTGAGCATGGCGACGATAAAGTGCTGGTCGTCTGGGCAGGGCAACAGTAACTTTTCCGGCTTCCCGTTCGTCAGTACCTCGGGAAGCCGCCAACCAGGATAAAATGTCAGCCCTAATCAGCGTTGCAGGATaaa                                                                                 <  2:196300/149‑1 (MQ=255)
                                                                        ggCTTTGTTCGTGAGCATGGCGACGATAAAGTGCTGGTCGTCTGGGCAGGGCAACAGTAACTTTTCCGGCTTCCCGTTCGTCAGTACCTCGGGAAGCCGCCAACCAGGATAAAATGTCAGCCCTAATCAGCGTTGCAGGATAAAGCAcc                                                                            >  6:193870/1‑149 (MQ=255)
                                                                          cTTTGTTCGTGAGCATGGCGACGATAAAGTGCTGGTCGTCTGGGCAGGGCAACAGTAACTTTTCCGGCTTCCCGTTCGTCAGTACCTCGGGAAGCCGCCAACCAGGATAAAATGTCAGCCCTAATCAGCGTTGCAGGATAAAGCACCGc                                                                          >  2:252426/1‑149 (MQ=255)
                                                                           tttGTTCGTGAGCATGGCGACGATAAAGTGCTGGTCGTCTGGGCAGGGCAACAGTAACTTTTCCGGCTTCCCGTTCGTCAGTACCTCGGGAAGCCGCCAACCAGGATAAAATGTCa                                                                                                          <  4:115903/116‑1 (MQ=255)
                                                                                  gTGAGCATGGCGACGATAAAGTGCTGGTCGTCTGGGCAGGGCAACAGTAACTTTTCCGGCTTCCCGTTCGTCAGTACCTCGGGAAGCCGCCAACCAGGATAAAATGTCAGCCCTAATCAGCGTTGCAGGATAAAGCACCGCTCACTCtt                                                                  >  7:140058/1‑149 (MQ=255)
                                                                                     aGCATGGCGACGATAAAGTGCTGGTCGTCTGGGCAGGGCAACAGTAACTTTTCCGGCTTCCCGTTCGTCAGTACCTCGGGAAGCCGCCAACCAGGATAAAATGTCAGCCCTAATCAGCGTTGCAGGATAAAGCACCGCTCACTCTTCaa                                                               <  5:193870/149‑1 (MQ=255)
                                                                                         tGGCGACGATAAAGTGCTGGTCGTCTGGGCAGGGCAACAGTAACTTTTCCGGCTTCCCGTTCGTCAGTACCTCGGGAAGCCGCCAACCAGGATAAAATGTCAGCCCTAATCAGCGTTGCAGGATAAAGCACCGCTCACTCTTCAACAGa                                                           <  3:180507/149‑1 (MQ=255)
                                                                                          ggCGACGATAAAGTGCTGGTCGTCTGGGCAGGGCAACAGTAACTTTTCCGGCTTCCCGTTCGTCAGTACCTCGGGAAGCCGCCAACCAGGATAAAATGTCAGCCCTAATCAGCGTTGCAGGATAAAGCACCGCTCa                                                                       >  4:14854/1‑136 (MQ=255)
                                                                                           gCGACGATAAAGTGCTGGTCGTCTGGGCAGGGCAACAGTAACTTTTCCGGCTTCCCGTTCGTCAGTACCTCGGGAAGCCGCCAACCAGGATAAAATGTCAGCCCTAATCAGCGTTGCAGGATAAAGCACCGCTCACTCTTCAACAGAc                                                          <  5:211228/148‑1 (MQ=255)
                                                                                            cgacgaTAAAGTGCTGGTCGTCTGGGCAGGGCAACAGTAACTTTTCCGGCTTCCCGTTCGTCAGTACCTCGGGAAGCCGCCAACCAGGATAAAATGTCAGCCCTAATCAGCGTTGCAGGATAAAGCACCGCTCACTCTTCAACAGAcc                                                         >  1:234286/1‑148 (MQ=255)
                                                                                             gacgaTAAAGTGCTGGTCGTCTGGGCAGGGCAACAGTAACTTTTCCGGCTTCCCGTTCGTCAGTACCTCGGGAAGCCGCCAACCAGGATAAAATGTCAGCCCTAATCAGCGTTGCAGGATAAAGCACCGCTCACTCTTCAACAGACCGa                                                       >  4:18901/1‑149 (MQ=255)
                                                                                             gacgaTAAAGTGCTGGTCGTCTGGGCAGGGCAACAGTAACTTTTCCGGCTTCCCGTTCGTCAGTACCTCGGGAAGCCGCCAACCAGGATAAAATGTCAGCCCTAATCAGCGATGCAGGATAAAGCACCGCTCACTCATCAACACACCGa                                                       >  5:158922/1‑149 (MQ=255)
                                                                                                gaTATAGTGCTGGTCGTCTGGGCAGGGCATGAGTATCTTTTCTGGCTTCCCGTTCGTCAGTACCTGGGGTATCCGCCATCGTGGTTAAATTGTCAGGCCTATTCAGCGTTGCAGGATAATGCACCGCTCTCTCTTCAACATACCGtttt                                                    <  6:158922/149‑1 (MQ=255)
                                                                                                gaTAAAGTGCTGGTCGTCTGGGCAGGGCAACAGTAACTTTTCCGGCTTCCCGTTCGTCAGTACCTCgg                                                                                                                                     >  7:81691/1‑68 (MQ=255)
                                                                                                gaTAAAGTGCTGGTCGTCTGGGCAGGGCAACAGTAACTTTTCCGGCTTCCCGTTCGTCAGTACCTCgg                                                                                                                                     <  8:81691/68‑1 (MQ=255)
                                                                                                gaTAAAGTGCTGGTCGTCTGGGCAGGGCAACAGTAACTTTTCCGGCTTCCCGTTCGTCAGTACCTCGGGAAGCCGCCAACCAGGATAAAATGTCAGCCCTAATCAGCGTTGCAGGATAAAGCACCGCTCACTCTTc                                                                 <  1:244198/136‑1 (MQ=255)
                                                                                                gaTAAAGTGCTGGTCGTCTGGGCAGGGCAACAGTAACTTTTCCGGCTTCCCGTTCGTCAGTACCTCGGGAAGCCGCCAACCAGGATAAAATGTCAGCCCTAATCAGCGTTGCAGGATAAAGCACCGCTCACTCTTc                                                                 >  2:244198/1‑136 (MQ=255)
                                                                                                gaTAAAGTGCTGGTCGTCTGGGCAGGGCAACAGTAACTTTTCCGGCTTCCCGTTCGTCAGTACCTCGGGAAGCCGCCAACCAGGATAAAATGTCAGCCCTAATCAGCGTTGCAGGATAAAGCACCGCTCACTCTTCAACAGACCGAttt                                                    >  6:23956/1‑149 (MQ=255)
                                                                                                     aGTGCTGGTCGTCTGGGCAGGGCAACAGTAACTTTTCCGGCTTCCCGTTCGTCAGTACCTCGGGAAGCCGCCAACCAGGATAAAATGTCAGCCCTAATCAGCGTTGCAGGATAAAGCACCGCTCAc                                                                      <  4:71850/126‑1 (MQ=255)
                                                                                                       tGCTGGTCGTCTGGGCAGGGCAACAGTAACTTTTCCGGCTTCCCGTTCGTCAGTACCTCGGGAAGCCGCCAACCAGGATAAAATGTCAGCCCTAATCAGCGTTGCAGGATAAAGCACCGCTCACTCTTCAACAGACCGATTTGCAccc                                              >  5:98492/1‑148 (MQ=255)
                                                                                                        gCTGGTCGTCTGGGCAGGGCAACAGTAACTTTTCCGGCTTCCCGTTCGTCAGTACCTCGGGAAGCCGCCAACCAGGATAAAATGTCAGCCCTAATCAGCGTTGCAGGATAAAGCACCGCTCACTCTTc                                                                 >  6:94769/1‑128 (MQ=255)
                                                                                                        gCTGGTCGTCTGGGCAGGGCAACAGTAACTTTTCCGGCTTCCCGTTCGTCAGTACCTCGGGAAGCCGCCAACCAGGATAAAATGTCAGCCCTAATCAGCGTTGCAGGATAAAGCACCGCTCACTCTTc                                                                 <  5:94769/128‑1 (MQ=255)
                                                                                                          tGGTCGTCTGGGCAGGGCAACAGTAACTTTTCCGGCTTCCCGTTCGTCAGTACCTCGGGAAGCCGCCAACCAGGATAAAATGt                                                                                                            >  4:69577/1‑83 (MQ=255)
                                                                                                            gtcgtcTGGGCAGGGCAACAGTAACTTTTCCGGCTTCCCGTTCGTCAGTACCTCGGGAAGCCGCCAACCAGGATAAAATGTCAGCCCTAATCAGCGTTGCGGGATAAAGCACCGCTCACTCTTCAACAGACCGATTTGCACCCCAGCa                                         >  3:208490/1‑148 (MQ=255)
                                                                                                            gtcgtcTGGGCAGGGCAACAGTAACTTTTCCGGCTTCCCGTTCGTCAGTACCTCGGGAAGCCGCCAACCAGGATAAAATGTCAGCCCTAATCAGCGTTGCAGGATAAAGCACCGCTCACTCTTCAACAGACCGAttt                                                    >  4:24130/1‑137 (MQ=255)
                                                                                                            gtcgtcTGGGCAGGGCAACAGTAACTTTTCCGGCTTCCCGTTCGTCAGTACCTCGGGAAGCCGCCAACCAGGATAAAATGTCAGCCCTAATCAGCGTTGCAGGATAAAGCACCGCTCACTCTTCAACAGACCGAttt                                                    <  3:24130/137‑1 (MQ=255)
                                                                                                            gtcgtcTGGGCAGGGCAACAGTAACTTTTCCGGCTTCCCGTTCGTCAGTACCTCGGGAAGCCGCCAACCAGGATAAAATGTCAGCCCTAATCAGCGTTGCAGGATAAAGCACCGCTCACTCTTCAACAGACCGATTTGCACCCCAGCa                                         >  8:140822/1‑148 (MQ=255)
                                                                                                               gtcTGGGCAGGGCAACAGTAACTTTTCCGGCTTCCCGTTCGTCAGTACCTCGGGAAGCCGCCAACCAGGATAAAATGTCAGCCCTAATCCGCGTTGCAGGATAAAGCACCGCTCACTCTTCAACAGACCGATTTGCACCCCAGCAAATg                                     >  7:17775/1‑149 (MQ=255)
                                                                                                               gtcTGGGCAGGGCAACAGTAACTTTTCCGGCTTCCCGTTCGTCAGTACCTCGGGAAGCCGCCAACCAGGATAAAATGTCAGCCCTAATCAGCGTTGCAGGATAAAGCACCGCTCACTCtt                                                                  <  1:161160/120‑1 (MQ=255)
                                                                                                               gtcTGGGCAGGGCAACAGTAACTTTTCCGGCTTCCCGTTCGTCAGTACCTCGGGAAGCCGCCAACCAGGATAAAATGTCAGCCCTAATCAGCGTTGCAGGATAAAGCACCGCTCACTCtt                                                                  >  2:161160/1‑120 (MQ=255)
                                                                                                               gtcTGGGCAGGGCAACAGTAACTTTTCCGGCTTCCCGTTCGTCAGTACCTCGGGAAGCCGCCAACCAGGATAAAATGTCAGCCCTAATCAGCGTTGCAGGATAAAGCACCGCTCACTCTTCAACAg                                                            <  5:150162/126‑1 (MQ=255)
                                                                                                               gtcTGGGCAGGGCAACAGTAACTTTTCCGGCTTCCCGTTCGTCAGTACCTCGGGAAGCCGCCAACCAGGATAAAATGTCAGCCCTAATCAGCGTTGCAGGATAAAGCACCGCTCACTCTTCAACAg                                                            >  6:150162/1‑126 (MQ=255)
                                                                                                                tcTGGGCAGGGCAACAGTAACTTTTCCGGCTTCCCGTTCGTCAGTACCTCGGGAAGCCGCCAACCAGGATAAAATGTCAGCCCTAATCAGCGTTGCAGGATAAAGCACCGc                                                                          >  1:30677/1‑111 (MQ=255)
                                                                                                                tcTGGGCAGGGCAACAGTAACTTTTCCGGCTTCCCGTTCGTCAGTACCTCGGGAAGCCGCCAACCAGGATAAAATGTCAGCCCTAATCAGCGTTGCAGGATAAAGCACCGc                                                                          <  2:30677/111‑1 (MQ=255)
                                                                                                                tcTGGGCAGGGCAACAGTAACTTTTCCGGCTTCCCGTTCGTCAGTACCTCGGGAAGCCGCCAACCAGGATAAAATGTCAGCCCTAATCAGCGTTGCAGGATAAAGCACCGCTCACTCTTc                                                                 <  2:241275/120‑1 (MQ=255)
                                                                                                                tcTGGGCAGGGCAACAGTAACTTTTCCGGCTTCCCGTTCGTCAGTACCTCGGGAAGCCGCCAACCAGGATAAAATGTCAGCCCTAATCAGCGTTGCAGGATAAAGCACCGCTCACTCTTc                                                                 >  1:241275/1‑120 (MQ=255)
                                                                                                                    ggcagggcaACAGTAACTTTTCCGGCTTCCCGTTCGTCAGTACCTCGGGAAGCCGCCAACCAGGATAAAATGTCAGCCCTAATCAGCGtt                                                                                           >  3:216597/1‑90 (MQ=255)
                                                                                                                    ggcagggcaACAGTAACTTTTCCGGCTTCCCGTTCGTCAGTACCTCGGGAAGCCGCCAACCAGGATAAAATGTCAGCCCTAATCAGCGTTGCAGGATAAAGCACCGCTCACTCTTCAACAGACCGATTTGCACCCCAGCAAATGTa                                   <  5:23956/146‑1 (MQ=255)
                                                                                                                    ggcagggcaACAGTAACTTTTCCGGCTTCCCGTTCGTCAGTACCTCGGGAAGCCGCCAACCAGGATAAAATGTCAGCCCTAATCAGCGTTGCAGGATAAAGCACCGCTCACTCTTCAACAGACCGATTTGCACCCCAGCAAATGTa                                   <  4:28972/146‑1 (MQ=255)
                                                                                                                    ggcagggcaACAGTAACTTTTCCGGCTTCCCGTTCGTCAGTACCTCGGGAAGCCGCCAACCAGGATAAAATGTCAGCCCTAATCAGCGTTGCAGGATAAAGCACCGCTCACTCTTCAACAGACCGATTTGCACCCCAGCAAATGTAGCg                                >  1:246753/1‑149 (MQ=255)
                                                                                                                      cagggcaACAGTAACTTTTCCGGCTTCCCGTTCGTCAGTACCTCGGGAAGCCGCCAACCAGGATAAAATGTCAGCCCTAATCAGCGTTGCAGGATAAAGCACCGCTCACTCTTCAACAGACCGATTTGCACCCCAGCAAATGTAGCGtt                              <  2:234286/149‑1 (MQ=255)
                                                                                                                       agggcaACAGTAACTTTTCCGGCTTCCCGTTCGTCAGTACCTCGGGAAGCCGCCAACCAGGATAAAATGTCAGCCCTAATCAGCGTTGCAGGATAAAGCACCGCTCACTCTTCAACAGACCGATTTGCACCCCAGCAAATGTAGCGTTa                             <  6:98492/149‑1 (MQ=255)
                                                                                                                        gggcaACAGTAACTTTTCCGGCTTCCCGTTCGTCAGTACCTCGGGAAGCCGCCAACCAGGATAAAATGTCAGCCCTAATCAGCGTTGCAGGATAAAGCACCGCTCACTCTTCAACAGACCGATTTGCACCCCAGCAAATGTAGCGTTAt                            >  8:139864/1‑149 (MQ=255)
                                                                                                                          gcaACAGTAACTTTTCCGGCTTCCCGTTCGTCAGTACCTCGGGAAGCCGCCAACCAGGATAAAATGTCAGCCCTAATCAGCGTTGCAGGATAAAGCACCGCTCACTCTTCAACAGa                                                           >  4:146983/1‑116 (MQ=255)
                                                                                                                          gcaACAGTAACTTTTCCGGCTTCCCGTTCGTCAGTACCTCGGGAAGCCGCCAACCAGGATAAAATGTCAGCCCTAATCAGCGTTGCAGGATAAAGCACCGCTCACTCTTCAACAGa                                                           <  3:146983/116‑1 (MQ=255)
                                                                                                                          gcaACAGTAACTTTTCCGGCTTCCCGTTCGTCAGTACCTCGGGAAGCCGCCAACCAGGATAAAATGTCAGCCCTAATCAGCGTTGCAGGATAAAGCACCGCTCACTCTTCAACAGACCGATTTGCACCCCAGCAAATGTAGCGTTATTg                          >  1:134513/1‑149 (MQ=255)
                                                                                                                          gcaACAGTAACTTTTCAGGCTTCCCGTTCGTCAGTACCTAGGGAAGCCGCCAACCAGGATAAAATGTCAGCCCTAATCAGCGTTGCAGTATAAAGCACCGATCACTCTTCAACAGACCGATTTGCACCCCAGCAAATGTAGCGTTAtt                           <  7:15492/148‑1 (MQ=255)
                                                                                                                           caACAGTAACTTTTCCGGCTTCCCGTTCGTCAGTACCTCGGGAAGCCGCCAACCAGGATAAAATGTCAGCCCTAATCAGCGTTGCAGGATAAAGCACCGCTCACTCTGCAACAGACCGATTTGCACCCCAGCAAATGTAGCGTTATTGt                         >  7:12326/1‑149 (MQ=255)
                                                                                                                            aaCAGTAACTTTTCCGGCTTCCCGTTCGTCAGTACCTCGGGAAGCCGCCAACCAGGATAAAATGTCAGCCCTAATCAGCGTTGCAGGATAAAGCACCGCTCACTCTTCAACAGACCGATTTGCACCCCAGCAAATGTAGCGTTATTGtt                        <  2:246753/149‑1 (MQ=255)
                                                                                                                               aGTAACTTTTCCGGCTTCCCGTTCGTCAGTACCTCGGGAAGCCGCCAACCAGGATAAAATGTCAGCCCTAATCAGCGTTGCAGGATAAAGCACCGCTCACTCTTCAACAGACCGATTTGCACCCCAGCAAATGTAGc                                 <  6:99629/137‑1 (MQ=255)
                                                                                                                               aGTAACTTTTCCGGCTTCCCGTTCGTCAGTACCTCGGGAAGCCGCCAACCAGGATAAAATGTCAGCCCTAATCAGCGTTGCAGGATAAAGCACCGCTCACTCTTCAACAGACCGATTTGCACCCCAGCAAATGTAGCGTTATTGTTAcc                     >  8:76528/1‑149 (MQ=255)
                                                                                                                                gTAACTTTTCCGGCTTCCCGTTCGTCAGTACCTCGGGAAGCCGCCAACCAGGATAAAATGTCAGCCCTAATCAGCGTTGCAGGATAAAGCACCGCTCACTCTTCAACAGACCGATTTGCACCCCAGCAAATGTAGCGTTATTGTTAcct                    >  6:200152/1‑149 (MQ=255)
                                                                                                                                gTAACTTTTCCGGCTTCCCGTTCGTCAGTACCTCGGGAAGCCGCCAACCAGGATAAAATGTCAGCCCTAATCAGCGTTGCAGGATAAAGCACCGCTCACTCTTCAACAGACCGATTTGCACCCCAGCAAATGTAGCGTTATTGTTAcct                    >  4:167912/1‑149 (MQ=255)
                                                                                                                                 tAACTTTTCCGGCTTCCCGTTCGTCAGTACCTCGGGAAGCCGCCAACCAGGATAAAATGTCAGCCCTAATCAGCGTTGCAGGATAAAGCACCGCTCACTCTTCAACAGACCGATTTGCACCCCAGCAAATGTAGCGTTAtt                           <  2:22752/141‑1 (MQ=255)
                                                                                                                                 tAACTTTTCCGGCTTCCCGTTCGTCAGTACCTCGGGAAGCCGCCAACCAGGATAAAATGTCAGCCCTAATCAGCGTTGCAGGATAAAGCACCGCTCACTCTTCAACAGACCGATTTGCACCCCAGCAAATGTAGCGTTAtt                           >  1:22752/1‑141 (MQ=255)
                                                                                                                                 tAACTTTTCCGGCTTCCCGTTCGTCAGTACCTCGGGAAGCCGCCAACCAGGATAAAATGTCAGCCCTAATCAGCGTTGCAGGATAAAGCACCGCTCACTCTTCAACAGACCGATTTGCACCCCAGCAAATGTAGCGTTATTGTTAcctt                   >  8:46315/1‑149 (MQ=255)
                                                                                                                                 tAACTTTTCCGGCTTCCCGTTCGTCAGTACCTCGGGAAGCCGCCAACCAGGATAAAATGTCAGCCCTAATCAGCGTTGCAGGATAAAGCACCGCTCACTCTTCAACAGACCGATTTGCACCCCAGCAAATGTAGCGTTATTGTTAcctt                   <  5:7821/149‑1 (MQ=255)
                                                                                                                                    cTTTTCCGGCTTCCCGTTCGTCAGTACCTCGGGAAGCCGCCAACCAGGATAAAATGTCAGCCCTAATCAGCGTTGCAGGATAAAGCACCGCTCACTCTTc                                                                 <  8:154870/100‑1 (MQ=255)
                                                                                                                                     ttttCCGGCTTCCCGTTCGTCAGTACCTCGGGAAGCCGCCAACCAGGATAAAATGTCAGCCCTAATCAGCGTTGCAGGATAAAGCACCGCTCACTCTTCAACAGACCGAttt                                                    >  6:210861/1‑112 (MQ=255)
                                                                                                                                       ttacGGATTCACGTTCGTCAGTAACTCGTGAAGCCGCCAACAAGGATAAAATGTCAGCACTAATCAGCGTTGAAGTATAAAGCACCGCTCACTCTTAAACAGACCGATTTGCACCCCAGCAAATGTAGCGTTATTGTTAccttcatt               <  8:12326/144‑1 (MQ=255)
                                                                                                                                       ttCCGGCTTCCCGTTCGTCAGTACCTCGGGAAGCCGCCAACCAGGATAAAATGTCAGCCCTAATCAGCGTTGCAGGATAAAGCACCGCTCACTCTTCAACAGACCGATTTGCACCCCAGCAAATGTAGCGTTATTGTTAccttcctt               <  6:142878/147‑1 (MQ=255)
                                                                                                                                          cGGCTTCCCGTTCGTCAGTACCTCGGGAAGCCGCCAACCAGGATAAAATGTCAGCCCTAATCAGCGTTGCAGGATAAAGCACCGCTCACTCTTCAACAGACCGATTTGCACCCCAGCAAATGTAGCGTTATTGTTACCTTCCTTGCTa           <  7:76528/148‑1 (MQ=255)
                                                                                                                                          cGGCTTACCGTTCGTCAGTACCTCGGGAAGCCGCCAACCAGGATAAAATGTCAGCCCTAATCAGCGTTGCAGGATAAAGCACCGCTCACTCTTCAACAGACCGATTTGCACCCCAGCAAATGTAGCGTTATTGTTACCTTCCTTGCTa           >  2:81779/1‑148 (MQ=255)
                                                                                                                                           ggCTTCCCGTTCGTCAGTACCTCGGGAAGCCGCCAACCAGGATAAAATGTCAGCCCTAATCAGCGTTGCAGGATACAGCAGCGCTCACTCTTCAACCGACCGATTTGCACCCCAGCAAATGTAGCGTTATTGTTACCTTCCGTGCTACa         <  3:141623/149‑1 (MQ=255)
                                                                                                                                              ttCCCGTTCGTCAGTACCTCGGGAAGCCGCCAACCAGGATAAAATGTCAGCCCTAATCAGCGTTGCAGGATAAAGCACCGCTCACTCTTCAACAGACCGATTTGCACCCCAGCAAATGTAGCGTTATTGtt                        >  3:73231/1‑131 (MQ=255)
                                                                                                                                              ttCCCGTTCGTCAGTACCTCGGGAAGCCGCCAACCAGGATAAAATGTCAGCCCTAATCAGCGTTGCAGGATAAAGCACCGCTCACTCTTCAACAGACCGATTTGCACCCCAGCAAATGTAGCGTTATTGtt                        <  4:73231/131‑1 (MQ=255)
                                                                                                                                                 ccGTTCGTCAGTACCTCGGGAAGCCGCCAACCAGGATAAAATGTCAGCCCTAATCAGCGTTGCAGGATAAAGCACCGCTCACTCTTCAACAGACCGATTTGCACCCCAGCAAATGTAGCGTTATTGTTACCTTCCTTGCTACAGAGtt    <  1:252426/148‑1 (MQ=255)
                                                                                                                                                  cGTTCGTCAGTACCTCGGGAAGCCGCCAACCAGGATAAAATGTCAGCCCTAATCAGCGTTGCAGGATAAAGCACCGCTCACTCTTCAACAGACCGATTTGCACCCCAGCAAATGTAGCGTTATTGTTACCTTCCTTGCTACAGAGTTCg  >  6:60853/1‑149 (MQ=255)
                                                                                                                                                   |                                                                                                                                                   
AGCCAGTTCCGCGCCCGCCATCCCGCAATTGGCGCGGGCAAACAAACGACACTTTTGCTGAAGCAGGGCTACGGCTTTGTTCGTGAGCATGGCGACGATAAAGTGCTGGTCGTCTGGGCAGGGCAACAGTAACTTTTCCGGCTTCCCGTTCGTCAGTACCTCGGGAAGCCGCCAACCAGGATAAAATGTCAGCCCTAATCAGCGTTGCAGGATAAAGCACCGCTCACTCTTCAACAGACCGATTTGCACCCCAGCAAATGTAGCGTTATTGTTACCTTCCTTGCTACAGAGTTCG  >  NC_000913/3739396‑3739690

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.