New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 409601689 (0.980)4 (0.050) 4/254 NT 4.4% coding (1433/1470 nt) rhaB rhamnulokinase
?NC_000913 = 4096038 90 (1.040)coding (1411/1470 nt) rhaB rhamnulokinase
Rejected: Frequency below/above cutoff threshold.

Only 100 of 111 total aligned reads displayed.

GTGCATTGAAACGGGTAAACGATCAAGTTGGCGCAGCGCCTCCTCGACATCAATCCCCACCGCCGCGAAACGCTGTTTCGCTAGCTCCCAGGCCTGTTCCAGTTGAGTGGTCATGCGCAAAGCTCCTTTGTCTGTCGTGTAGAGTGAATCTGCGCCACATAGTGG‑GCAATTTCACTGTCAGGATTAGGGGTAAAGGTGGTCAGATTCGCGGTGGTGCTGACGACCTGACGGAAATCATCCACATTGTTGAGTTCATCCAGCGTCATTAACTGGATGCCGATATTGCCGAGCGTCGA  >  NC_000913/4095869‑4096164
                                                                                                                                                   |                                                                                                                                                     
gTGCATTGAAACGGGTAAACGATCAAGTTGGCGCAGCGCCTCCTCGACATCAATCCCCACCGCCGCGAAACGCTGTTTCGCTAGCTCCCAGGCCTGTTCCAGTTGAGTGGTCATGCGCAAAGCTCCTTTGTCTGTCGTGTAGAGTGAAt                                                                                                                                                      <  7:16848/149‑1 (MQ=255)
 tGCATTGAAACGGGTAAACGATCAAGTTGGCGCAGCGCCTCCTCGACATCAATCCCCACCGCCGCGAAACGCTTTTACCATAGCTCCCAGGCCTGTTCCAGTTCAGTGGTCATGCGCAAAGCACCTTTGACTGACGTGTAGAGTGAATc                                                                                                                                                     >  7:324450/1‑149 (MQ=255)
 tGCATTGAAACGGGTAAACGATCAAGTTGGCGCAGCGCCTCCTCGACATCAATCCCCACCGCCGCGAAACGCTGTTTCGCTAGCTCCCAGGCCTGTTCCAGTTGAGTGGTCATGCGCAAAGCTCCTTTGTCTGTCGTGTAGAGTGAATc                                                                                                                                                     >  1:259164/1‑149 (MQ=255)
     ttGAAACGGGTAAACGATCAAGTTGGCGCAGCGCCTCCTCGACATCAATCCCCACCGCCGCGAAACGCTGTTTCGCTAGCTCCCAGGCCTGTTCCAGTTGAGTGGTCATGCGCAAAGCTCCTTTGTCTGTCGTGTAGAGTGAATCTgcg                                                                                                                                                 >  4:151684/1‑149 (MQ=255)
     ttGAAACGGGTAAACGATCAAGTTGGCGCAGCGCCTCCTCGACATCAATCCCCACCGCCGCGAAACGCTGTTTCGCTAGCTCCCAGGCCTGTTCCAGTTGAGTGGTCATGCGCAAAGCTCCTTTGTCTGTCGTGTAGAGTGAATCTgcg                                                                                                                                                 >  6:147663/1‑149 (MQ=255)
        aaaCGGGTAAACGATCAAGTTGGCGCAGCGCCTCCTCGACATCAATCCCCACCGCCGCGAAACGCTGTTTCGCTAGCTCCCAGGCCTGTTCCAGTTGAGTGGTCATGCGCAAAGCTCCTTTGTCTGTCGTGTAGAGTGAATCTGCGCca                                                                                                                                              <  3:151684/149‑1 (MQ=255)
        aaaCGGGTAAACGATCAAGTTGGCGCAGCGCCTCCTCGACATCAATCCCCACCGCCGCGAAACGCTGTTTCGCTAGCTCCCAGGCCTGTTCCAGTTGAGTGGGCATGCGCAAAGCTCCTTTGTCTGTCGTGTAGAGTGAATCTGCGCca                                                                                                                                              <  1:18872/149‑1 (MQ=255)
              gTAAACGATCAAGTTGGCGCAGCGCCTCCTCGACATCAATCCCCACCGCCGCGAAACGCTGTTTCGCTAGCTCCCAGGCCTGTTCCAGTTGAGTGGTCATGCGCAAAGCTCCTTTGTCTGTCGTGTAGAGTGAAattgcccactatgtg                                                                                                                                        >  7:166334‑M1/1‑134 (MQ=255)
              gTAAACGATCAAGTTGGCGCAGCGCCTCCTCGACATCAATCCCCACCGCCGCGAAACGCTGTTTCGCTAGCTCCCAGGCCTGTTCCAGTTGAGTGGTCATGCGCAAAGCTCCTTTGTCTGTCGTGTAGAGTGAATCTGCGCCACATAGt                                                                                                                                        >  1:246244/1‑149 (MQ=255)
               tAAACGATCAAGTTGGCGCAGCGCCTCCTCGATATCAATCCCCACCGCCGCGAAACGCTGTTTCGCTAGCTCCCAGGCCTGTTCCAGTTGAGTGGTCATGCGCAAAGCTCCTTTGTCTGTCGTGTAGAGTGAATCTGCGCCACATAGTg                                                                                                                                       <  7:300362/149‑1 (MQ=255)
                 aaCGATCAAGTTGGCGCAGCGCCTCCTCGACATCAATCCCCACCGCCGCGAAACGCTGTTTCGCTAGCTCCCAGGCCTGTTCCAGTTGAGTGGTCATGCGCAAAGCTCCTTTGTCTGTCGTGTAGAGTGAATCTGCGCCACATAGTgg                                                                                                                                      <  4:29767/148‑1 (MQ=255)
                     aTCAAGTTGGCGCAGCGCCTACTCGACATCAATCCCCACCGCCGCGAAACGCTGTTTCGCTAGCTCCCAGGCCTGTTCCAGTTGAGTGGTCATGCGCAAAGCTCCTTTGTCTGTCGTGTAGAGTTAATCTGCGCCCCATAGTGG‑GCAAt                                                                                                                                >  2:298843/1‑149 (MQ=255)
                           ttGGCGCAGCGCCTCCTCGACATCAATCCCCACCGCCGCGAAACGCTGTTTCGCTAGCTCCCAGGCCTGTTCCAGTTGAGTGGTCATGCGCAAAGCTCCTTTGTCTGTCGTGTAGAGTGAATCTGCGCCACATAGTGG‑GCAATttcact                                                                                                                          >  8:114399‑M2/1‑143 (MQ=255)
                               cgcAGCGCCTCCTCGACATCAATCCCCACCGCCGCGAAACGCTGTTTCGCTAGCTCCCAGGCCTGTTCCAGTTGAGTGGTCATGCGCAAAGCTCCTTTGTCTGTCGTGTAGAGTGAATCTGCGCCACATAGTGG‑GCAATTTCACTGTCa                                                                                                                      <  6:354712/149‑1 (MQ=255)
                                 cAGCGCCTCCTCGACATCAATCCCCACCGCCGCGAAACGCTGTTTCGCTAGCTCCCAGGCCTGTTCCAGTTGAGTGGTCATGCGCAAAGCTCCTTTGTCTGTCGTGTAGAGTGAATCTGCGCCACATAGTGG‑GCAATTTCACTGTCAgg                                                                                                                    <  8:148844/149‑1 (MQ=255)
                                     gcCTCCTCGACATCAATCCCCACCGCCGCGAAACGCTGTTTCGCTAGCTCCCAGGCCTGTTCCAGTTGAGTGGTCATGCGCAAAGCTCCTTTGTCTGTCGTGTAGAGTGAATCTGCGCCACATAGTGG‑GCAATTTCACTGTCAGGATTa                                                                                                                <  4:357969/149‑1 (MQ=255)
                                     gcCTCCTCGACATCAATCCCCACCGCCGCGAAACGCTGTTGCGCTAGCTCCCAGGCCTGTTCCAGTTGAGTGGTCATGCGCAAAGCTCCTTTGTCTGTCGTGTAGAGTGAATCTGCGCCACATAGTGG‑GCAATTTCACTGTCAGGATTa                                                                                                                <  2:407823/149‑1 (MQ=255)
                                      cctcctCGACATCAATCCCCACCGCCGCGAAACGCTGTTTCGCTAGCTCCCAGGCCTGTTCCAGTTGAGTGGTCATGCGCAAAGCTCCTTTGTCTGTGGTGTAGAGTGAATCTGCGCCACATAGTGG‑GCAATTTCACTGTCAGGATTAg                                                                                                               <  3:31787/149‑1 (MQ=255)
                                        tcctcGACATCAATCCCCACCGCCGCGAAACGCTGTTTCGCTAGCTCCCAGGCCTGTTCCAGTTGAGTGGTCATGCGCAAAGCTCCTTTGTCTGTCGTGTAGAGTGAATCTGCGCCACATAGTGG‑GCAATTTCACTGTCAGGATTAggg                                                                                                             >  3:38378/1‑149 (MQ=255)
                                          ctcGACATCAATCCCCACCGCCGCGAAACGCTGTTTCGCTAGCTCCCAGGCCTGTTCCAGTTGAGTGGTCATGCGCAAAGCTCCTTTGTCTGTCGTGTAGAGTGAATCTGCGCCACATAGTGG‑GCAATTTCACTGTCAGGATTAggg                                                                                                             <  2:140552/147‑1 (MQ=255)
                                          ctcGACATCAATCCCCACCGCCGCGAAACGCTGTTTCGCTAGCTCCCAGGCCTGTTCCAGTTGAGTGGTCATGCGCAAAGCTCCTTTGTCTGTCGTGTAGAGTGAATCTGCGCCACATAGTGG‑GCAATTTCACTGTCAGGATTAggg                                                                                                             <  3:310279/147‑1 (MQ=255)
                                          ctcGACATCAATCCCCACCGCCGCGAAACGCTGTTTCGCTAGCTCCCAGGCCTGTTCCAGTTGAGTGGTCATGCGCAAAGCTCCTTTGTCTGTCGTGTAGAGTGAATCTGCGCCACATAGTGG‑GCAATTTCACTGGCAGGATTAgggg                                                                                                            <  6:353219/148‑1 (MQ=255)
                                          ctcGACATCAATCCCCACCGCCGCGAAACGCTGTTTCGCTAGCTCCCAGGCCTGTTCCAGTTGAGTGGTCATGCGCAAAGCTCCTTTGTCTGTCGTGTAGAGTGAAATTGC‑CCACTATGTGGCGCAGAttcactctacacgacagacaa                                                                                                           >  8:166334‑M2/1‑128 (MQ=255)
                                           tcGACATCAATCCCCACCGCCGCGAAACGCTGTTTCGCTAGCTCCCAGGCCTGTTCCAGTTGAGTGGTCATGCGCAAAGCTCCTTTGTCTGTCGTGTAGAGTGAATCTGCGCcac                                                                                                                                             >  3:281631/1‑115 (MQ=255)
                                           tcGACATCAATCCCCACCGCCGCGAAACGCTGTTTCGCTAGCTCCCAGGCCTGTTCCAGTTGAGTGGTCATGCGCAAAGCTCCTTTGTCTGTCGTGTAGAGTGAATCTGCGCcac                                                                                                                                             <  4:281631/115‑1 (MQ=255)
                                           tcGACATCAATCCCCACCGCCGCGAAACGCTGTTTCGCTAGCTCCCAGGCCTGTTCCAGTTGAGTGGTCATGCACAAAGCTCCTTTGTCTGTCGTGTAGAGTGAATCTGCGCCACATAGTGG‑GCAATTTCACTGTCAGGATTAGGGGt                                                                                                           >  3:246310/1‑148 (MQ=255)
                                             gACATCAATCCCCACCGCCGCGAAACGCTGTTTCGCTAGCTCCCAGGCCTGTTCCAGTTGAGTGGTCATGCGCAAAGCTCCTTTGTCTGTCGTGTAGAGTGAATCTGCGCCACATAGTGG‑GCAATTTCACTGTCAGGATTAGGGGTa                                                                                                          >  7:347032/1‑147 (MQ=255)
                                              aCATCAATCCCCACCGCCGCGAAACGCTGTTTCGCTAGCTCCCAGGCCTGTTCCAGTTGAGTGGTCATGCGCAAAGCTCCTTTGTCTGTCGTGTAGAGTGAATCTGCGCCACATAGTGG‑GCAATTTCACTGTCAGGATTAGGGGTAAAg                                                                                                       <  8:349435/149‑1 (MQ=255)
                                                 tCAATCCCCACCGCCGCGAAACGCTGTTTCGCTAGCTCCCAGGCCTGTTCCAGTTGAGTGGTCATGCGCAAAGCTCCTTTGTCTGTCGTGTAGAGTGAATCTGCGCCACATAGTGG‑GCAATTTCACTGTCAGGATTAGGGGTAAAggtg                                                                                                    >  7:226357/1‑149 (MQ=255)
                                                 tCAATCCCCACCGCCGCGAAACGCTGTTTCGCTAGCTCCCAGGCCTGTTCCAGTTGAGTGGTCATGCGCAAAGCTCCTTTGTCTGTCGTGTAGAGTGAATCTGCGCCACATAGTGG‑GCAATTTCACTGTCAGGATTAGGGGTAAAggt                                                                                                     >  8:287018/1‑148 (MQ=255)
                                                 tCAATCCCCACCGCCGCGAAACGCTGTTTCGCTAGCTCCCAGGCCTGTTCCAGTTGAGTGGTCATGCGCAAAGCTCCTTTGTCTGTCGTGTAGAGTGAATCTGCGCCACATAGTGG‑GCAATTTCACTGTCAGGATTAGGGGTAAAggt                                                                                                     <  7:287018/148‑1 (MQ=255)
                                                   aaTCCCCACCGCCGCGAAACGCTGTTTCGCTAGCTCCCAGGCCTGTTCCAGTTGAGTGGTCATGCGCAAAGCTCCTTTGTCTGTCGTGTAGAGTGAATCTGCGCCACATAGTGG‑GCAATTTCACTGTCAGGATTAGGGGTAAAggtggt                                                                                                  <  1:217556/149‑1 (MQ=255)
                                                    aTCCCCACCGCCGCGAAACGCTGTTTCGCTAGCTCCCAGGCCTGTTCCAGTTGAGTGGTCATGCGCAAAGCTCCTTTGTCTGTCGTGTAGAGTGAATCTGCGCCACATAGTGG‑GCAATTTCACTGTCAGGATTAGGGGTAAAggtggt                                                                                                  >  7:262813/1‑148 (MQ=255)
                                                     tCCCCACCGCCGCGAAACGCTGTTTCGCTAGCTCCCAGGCCTGTTCCAGTTGAGTGGTCATGCGCAAAGCTCCTTTGTCTGTCGTGTAGAGTGAAattgcccactatgtggcgcagattcactctaca                                                                                                                      >  3:336365‑M1/1‑95 (MQ=255)
                                                     tCCCCACCGCCGCGAAACGCTGTTTCGCTAGCTCCCAGGCCTGTTCCAGTTGAGTGGTCATGCGCAAAGCTCCTTTGTCTGTCGTGTAGAGTGAAattgcccactatgtggcgcagattcactctaca                                                                                                                      <  4:336365‑M1/128‑34 (MQ=255)
                                                       ccccccGCCGCGACACGCTGTTTCGCTAGCTCCCAGGCCTGTTCCAGTTGAGTGGTCCTGCGCAAAGCGCCGTTGTCTGTCGTGTAGAGTGAATCTGCGCCACATAGTGG‑GCAATTTCACTGTCAGGATTAGGGGTAAAGGTGGTCAGa                                                                                              <  6:294180/149‑1 (MQ=255)
                                                       cccACCGCCGCGAAACGCTGTTTCGCTAGCTCCCAGGCCTGTTCCAGTTGAGTGGTCATGCGCAAAGCTCCTTTGTCTGTCGTGTAGAGTGAATCTGCGCCACATAGTGG‑GCAATTTCACTGTCAGGATTAGGGGTAAAGGTGGTCAGa                                                                                              <  5:248186/149‑1 (MQ=255)
                                                              ccgcGAAACGCTGTTTCGCTAGCTCCCAGGCCTGTTCCAGTTGAGTGGTCATGCGCAAAGCTCCTTTGTCTGTCGTGTAGAGTGAATCTGCGCCACATAGTGG‑GCAATTTCACTGTCAGGATTAGGGGTAAAGGTGGTCAGATTCGCgg                                                                                       >  6:143299/1‑149 (MQ=255)
                                                                gcgAAACGCTGTTTCGCTAGCTGCCAGGCCTGTTCCAGTTGAGTGGGCATGCGCAAAGCTCCTTTGTCTGTCGTGTAGAGTGAATCTGCGCCACATAGTGG‑GCAATTTCACTGTCAGGATTAGGGGTAAAGGTGGTCAGATTCGCggtg                                                                                     <  8:324450/149‑1 (MQ=255)
                                                                gcgAAACGCTGTTTCGCTAGCTCCCAGGCCTGTTCCAGTTGAGTGGTCATGCGCAAAGCTCCTTTGTCTGTCGTGTAGAGTGAATCTGCGCCACATAGTGG‑GCAATTTCACTGTCAGGATTAGGGGTAAAGGTGGTCAGATTCGCggtg                                                                                     <  3:383406/149‑1 (MQ=255)
                                                                     aCGCTGTTTCGCTAGCTCCCAGGCCTGTTCCAGTTGAGTGGTCATGCGCAAAGCTCCTTTGTCTGTCGTGTAGAGTGAATCTGCGCCACATAGTGG‑GCAATTTCACTGTCAGGATTAGGGGTAAAGGTGGTCAGATTCGCGGTGGTGCt                                                                                >  5:72326/1‑149 (MQ=255)
                                                                               gCTAGCTCCCAGGCCTGTTACAGTTGAGTGGTCATGCGCAAAGCTCCTTTGTCTGTCGTGTAGAGTGAATCTGCGCCACATAGTGG‑GCAATTTCACTGTCAGGATTAGGGGTAAAGGTGGTCAGATTCGCGGTGGTGCTGACGACCTGa                                                                      >  8:20471/1‑149 (MQ=255)
                                                                                    cTCCCAGGCCTGTTCCAGTTGAGTGGTCATGCGCAAAGCTCCTTTGTCTGTCGTGTAGAGTGAATCTGCGCCACATAGTGG‑GCAATTTCACTGTCAGGATTAggg                                                                                                             >  1:71786/1‑105 (MQ=255)
                                                                                    cTCCCAGGCCTGTTCCAGTTGAGTGGTCATGCGCAAAGCTCCTTTGTCTGTCGTGTAGAGTGAATCTGCGCCACATAGTGG‑GCAATTTCACTGTCAGGATTAggg                                                                                                             <  2:71786/105‑1 (MQ=255)
                                                                                       ccAGGCCTGTTCCAGTTGAGTGGTCATGCGCAAAGCTCCTTTGTCTGTCGTGTAGAGTGAATCTGCGCCACATAGTGG‑GCAATTTCACTGTCAGGATTAGGTGTAAAGGTGGTCAGATTCGCGGTGGTGCTGACGACCTGAAGGAAat                                                               >  5:342846/1‑148 (MQ=255)
                                                                                       ccAGGCCTGTTCCAGTTGAGTGGTCATGCGCAAAGCTCCTTTGTCTGTCGTGTAGAGTGAATCTGCGCCACATAGTGG‑GCAATTTCACTGTCAGGATTAGGGGTAAAGGTGGTCAGATTCGCGGTGGTGCTGACGACCTGACGGAAat                                                               >  4:104130/1‑148 (MQ=255)
                                                                                       ccAGGCCTGTTCCAGTTGAGTGGTCATGCGCAAAGCTCCTTTGTCTGTCGTGTAGAGTGAATCTGCGCCACATAGTGG‑GCAATTTCACTGTCAGGATTAGGGGTAAAGGTGGTCAGATTCGCGGTGGTGCTGACGACCTGACGGAAat                                                               >  1:265906/1‑148 (MQ=255)
                                                                                        cAGGCCTGTTCCAGTTGAGTGGTCATGCGCAAAGCTCCTTTGTCTGTCGTGTAGAGTGAATCTGCGCCACATAGTGG‑GCAATTTCACTGTCAGGATTAGGGGTAAAGGTGGTCAGATTCGCGGTGGTGCTgacgac                                                                          <  3:368286/136‑1 (MQ=255)
                                                                                        cAGGCCTGTTCCAGTTGAGTGGTCATGCGCAAAGCTCCTTTGTCTGTCGTGTAGAGTGAATCTGCGCCACATAGTGG‑GCAATTTCACTGTCAGGATTAGGGGTAAAGGTGGTCAGATTCGCGGTGGTGCTgacgac                                                                          >  4:368286/1‑136 (MQ=255)
                                                                                         aGGCCTGTTCCAGTTGAGTGGTCATGCGCAAAGCTCCTTTGTCTGTCGTGTAGAGTGAATCTGCGCCACATAGTGG‑GCAATTTCACTGTCAGGATTAGGGGTAAAGGTGGTCAGATTCGCGGTGGTGCTg                                                                               >  2:59919/1‑130 (MQ=255)
                                                                                         aGGCCTGTTCCAGTTGAGTGGTCATGCGCAAAGCTCCTTTGTCTGTCGTGTAGAGTGAATCTGCGCCACATAGTGG‑GCAATTTCACTGTCAGGATTAGGGGTAAAGGTGGTCAGATTCGCGGTGGTGCTg                                                                               <  1:59919/130‑1 (MQ=255)
                                                                                          ggCCTGTTCCAGTTGAGTGGTCATGCGCAAAGCTCCTTTGTCTGTCGTGTAGAGTGAATCTGCGCCACATAGTGG‑GCAATTTCACTGTCAGGATTAGGGGTAAAGGTGGTCAGATTCGCGGTGGTGCTGACGACCTGACGGAAatcatc                                                           >  1:19646/1‑149 (MQ=255)
                                                                                           ggcTGTTCCAGTTGAGTGGTCATGCGCATAGCTCCTTTGTCTGGCGTGTAGAGTGAATCTGCGCCACATAGTGG‑GCAATTTCACTGTCAGGATTAGGGGTAAAGGTGGTCAGATTCGCGGTGGTGCTGACGACCTGACGGAAatcatc                                                           <  5:50755/146‑1 (MQ=255)
                                                                                                ttCCAGTTGAGTGGTCATGCGCAAAGCTCCTTTGTCTGTCGTGTAGAGTGAATCTGCGCCCCATAGTGG‑GCAATTTCACTGTCAGGAGTAGGGGGAAAGGTGGTCAGATTCGCGGTGGTGCTGACGACCTGACGGATATCATGCACAtt                                                     >  2:245878/1‑149 (MQ=255)
                                                                                                ttCCAGTTGAGTGGTCATGCGCAAAGCTCCTTTGTCTGTCGTGTAGAGTGAATCTGCGCCACATAGTGG‑GCAATTTCACTGTCAGGATTa                                                                                                                >  6:72377/1‑90 (MQ=255)
                                                                                                ttCCAGTTGAGTGGTCATGCGCAAAGCTCCTTTGTCTGTCGTGTAGAGTGAATCTGCGCCACATAGTGG‑GCAATTTCACTGTCAGGATTa                                                                                                                <  5:72377/90‑1 (MQ=255)
                                                                                                ttCCAGTTGAGTGGTCATGCGCAAAGCTCCTTTGTCTGTCGTGTAGAGTGAATCTGCGCCACATAGTGG‑GCAATTTCACTGTCAGGATTAGGGGTAAAGGTGGTCAGATTCGCGGTGGTGCTGACGACCTGACGGAAATCATCCACAtt                                                     >  4:335613/1‑149 (MQ=255)
                                                                                                   cAGTTGAGTGGTCATGCGCAAAGCTCCTTTGTCTGTCGTGTAGAGTGAATCTGCGCCACATAGTGG‑GCAATTTCACTGTCAGGATTAGGGGTAAAGGTGGTCAGATTCGCGGTGGTGCTGACGACCTGACGGAAATCATCCACAttgtt                                                  <  2:259164/149‑1 (MQ=255)
                                                                                                   cAGTTGAGTGGGCATGCGCAAAGCTCATTTGTCTGTCGTGTAGAGTGAATCTGCGCCACATAGTGG‑GCAATTTCACTGTCAGGATTAGGGGTAAAGGTGGTCAGATTCGCGGTGGTGCTGACGACCTGACGGAAATCATCCACAttgt                                                   <  3:316641/148‑1 (MQ=255)
                                                                                                    aGTTGAGTGGTCATGCGCAAAGCTCCTTTGTCTGTCGTGTAGAGTGAATCTGCGCCACATAGTGG‑GCAATTTAACTGTCAGGATTAGGGGTAAAGGTGGTAAGATTCGCGGTGGTGCTGACGACCTGACGGAAATCATCCACAttgtt                                                  >  6:290638/1‑148 (MQ=255)
                                                                                                     gTTGAGTGGTCATGCGCAAAGCTCCTTTGTCTGTCGTGTAGAGTGAATCTGCGCCACATAGTGG‑GCAATTTCACTGTCAGGATTAGGGGTAAAGGTGGTCAGATTCGCGGTGGTGCTGACGACCTGACGGAAATCATCCACATTGTTGa                                                <  6:72326/149‑1 (MQ=255)
                                                                                                      ttGAGTGGTCATGCGCAAAGCTCCTTTGTCTGTCGTGTAGAGTGAATCTGCGCCACATAGTGG‑GCAATTTCACTGTCAGGATTAGGGGTAAAGGTGGTCAGATTCGCGGTGGTGCTGACGACCTGACGGAAATCATCCACATTGTTGAg                                               >  7:39155/1‑149 (MQ=255)
                                                                                                      ttGAGTGGTCATGCGCAAAGCTCCTTTGTCTGTCGTGTAGAGTGAATCTGCGCCACATAGTGG‑GCAATTTCACTGTCAGGATTAGGGGTAAAGGTGGTCAGATTCGCGGTGGTGCTGACGACCTGACGGAAATCATCCACATTGTTGAg                                               <  7:20471/149‑1 (MQ=255)
                                                                                                        gAGTGGTCATGCTCAAATCTCCTTTGTCTGTCGTGTAGAGTGAATCTGCGCCACATAGTGG‑GCATTTTCACTGTCAGGATTAGGGGTAAAGGTGGTCAGATTCGCGGTGGTGCTGACGACCTGACGGAAATCATCCACATTGTTGAGt                                              <  1:298843/148‑1 (MQ=255)
                                                                                                        gAGTGCTCATGCGAAAAGCTCCTTTGTCTGTCGTGTAGAGTGAATCTGCGCCACATAGTGG‑GCAATTAAACTGTCAGGATTAGGGGTAAAGGTGGGCAGTTTCGCGGTGGTGCTGACGACCTGACGTAAATCATCCACATTGTTGAg                                               <  4:266744/147‑1 (MQ=255)
                                                                                                           tGGTCATGCGCAAAGCTCCTTTGTCTGTCGTGTAGAGTGAATCTGCGCCACATAGTGG‑GCAATTTCACTGTCAGGATTAGGGGTAAAGGTGGTCAGATTCGCGGTGGTGCTGACGACCTGACGGAAATCATCCACATTGTTGAGTTCAt                                          >  8:69500/1‑149 (MQ=255)
                                                                                                            ggTCATGCGCAAAGCTCCTTTGTCTGTCGTGTAGAGTGAATCTGCGCCACATAGTGG‑GCAATTTCACTGTCAGGATTAGGGGTAAAGGTGGTCAGATTCGCGGTGGTGCTGACGACCTGACGGAAATCATCCACATTGTTGAGTTCATc                                         <  4:329676/149‑1 (MQ=255)
                                                                                                             gTCATGCGCAAAGCTCCTTTGTCTGTCGTGTAGAGTGAATCTGCGCCACATAGTGG‑GCAATTTCACTGTCAGGATTAGGGGTAAAGGTGGTCAGATTCGCGGTGGTGCTGACGACCTGACGGAAATCATCCACATTGTTGAGTTCATcc                                        <  5:147663/149‑1 (MQ=255)
                                                                                                             gTCATGCGCAAAGCTCCTTTGTCTGTCGTGTAGAGTGAATCTGCGCCACATAGTGG‑GCAATTTCACTGTCAGGATTAGGGGTAAAGGTGGTCAGATTCGCGGTGGTGCTGACGACCTGACGGAAATCATCCACATTGTTGAGTTCATc                                         <  5:101904/148‑1 (MQ=255)
                                                                                                             gTCATGCGCAAAGCTCCTTTGTCTGTCGTGTAGAGTGAATCTGCGCCACATAGTGG‑GCAATTTCACTGTCAGGATTAGGGGTAAAGGTGGTCAGATTCGCGGTGGTGCTGACGACCTGACGGAAATCATCCACATTGTTGAGTTCATc                                         <  2:246244/148‑1 (MQ=255)
                                                                                                                 tGCGCAAAGCTCCTTTGTCTGTCGTGTAGAGTGAATCTGCGCCACATAGTGG‑GCAATTTCACTGTCAGGATTAGGGGTAAAGGTGGTCAGATTCGCgg                                                                                       <  4:158097/98‑1 (MQ=255)
                                                                                                                 tGCGCAAAGCTCCTTTGTCTGTCGTGTAGAGTGAATCTGCGCCACATAGTGG‑GCAATTTCACTGTCAGGATTAGGGGTAAAGGTGGTCAGATTCGCgg                                                                                       >  3:158097/1‑98 (MQ=255)
                                                                                                                 tGCGCAAAGCTCCTTTGTCTGTCGTGTAGAGTGAATCTGCGCCACATAGTGG‑GCAATTTCACTGTCAGGATTAGGGGTAAAGGTGGTCAGATTCGCGGTGGTGCTGACGACCTGACGGAAATCATCCACATTGTTGAGTTCATCCAGCg                                    >  7:49092/1‑149 (MQ=255)
                                                                                                                    gcAAAGCTCCTTTGTCTGTCGTGTAGAGTGAATCTGCGCCACATAGTGG‑GCAATTTCACTGTCAGGATTAGGGGTAAAGGTGGTCAGATTCGCGGTGGTGCTGACGACCTGACGGAAATCATCCACATTGTTGAGTTCATCCAGCGTCa                                 <  8:226357/149‑1 (MQ=255)
                                                                                                                      aaaGCTCCTTTGTCTGTCGTGTAGAGTGAATCTGCGCCACATAGTGG‑GCAATTTCACTGTCAGGATTAGGGGTAAAGGTGGTCAGATTCTCGGTGGTGCTGACGACCTGACGGAAATCATCCACATTGTTGAGTACATCCAGCGTCAt                                >  3:267351/1‑148 (MQ=255)
                                                                                                                      aaaGCTCCTTTGTCTGTCGTGTAGAGTGAATCTGCGCCACATAGTGG‑GCAATTTCACTGTCAGGATTAGGGGTAAAGGTGGTCAGATTCGCGGTGGTGCTGACGACCTGACGGAAATCATCCACATTGTTGAGTTCATCCAGCGTCAt                                >  3:370499/1‑148 (MQ=255)
                                                                                                                          cTCCTTTGGCTGTCGTGTAGAGTGTATCTGCGCCACATAGTGG‑GCAATTTCACTGGCGGGCTTCGGGGTAAAGGTGGGCAGACTCGCGGGGGTGCTGACGACCTGACGGAAATCATCCACATTGTTGAGTTCATCCAGCGTCATTAACt                           <  2:79163/149‑1 (MQ=255)
                                                                                                                             cTTTGTCTGTCGTGTAGAGTGAATCTGCGCCACATAGTGG‑GCAATTTCACTGTCAGGATTAGGGGTAAAGGTGGTCAGATTCGCGGTGGTGCTGACGACCTGACGGAAATCATCCACATTGTTGAGTTCATCCAGCGTCATTAACTGGa                        <  8:39155/149‑1 (MQ=255)
                                                                                                                             cTTTGTCTGTCGTGTAGAGTGAATCTGCGCCACATAGTGG‑GCAATTTCACTGTCAGGATTAGGGGTAAAGGTGGTCAGATTCGCGGTGGTGCTGACGACCTGACGGAAATCATCCACATTGTTGAGTTCATCCAGCGTCATTAACTGGa                        <  2:19646/149‑1 (MQ=255)
                                                                                                                               ttGTCTGTCGTGTAGAGTGAAtctgcgccacatagtgggcaatttcactctacacgacagacaaaggagctttgcgcatgaccactcaactggaacaggcctgggagctagcgaaacagcgtttcgcggcggtggggattgatgtcgag                       >  8:166334‑M1/1‑21 (MQ=255)
                                                                                                                                 gtctgtcGGGTAGAGTGAATCTGCGCCCCATAGTGG‑GCAATGTCACTGTCAGCATTAGGGGTAAAGGTGGTCAGATTCGCGGTGGTGCGGTCGACCTTACGGAAATCATCCCCATGGTTTCGTTCATCCCGCGGCATTAACTGGAGGcc                    >  6:281757/1‑149 (MQ=255)
                                                                                                                                  tctgtcGTGTAGAGTGAATCTGCGCCACATAGTGG‑GCAATTTCACTGTCAGGATTAGGGGTAAAGGTGGTCAGATTCGCGGTGGTGCTGACGACCTGACGGAAATCATCCACATTGTTGAGTTCATCCAGCGTCATTAACTGGATGCCg                   <  3:282360/149‑1 (MQ=255)
                                                                                                                                      tcGTGTAGAGTGAATCTGCGCCACATAGTGG‑GCAATTTCACTGTCAGGATTAGGGGTAAAGGTGGTCAGATTCGCGGTGGTGCTGACGACCTGACGGAAATCATCCACATTGTTGAGTTCATCCAGCGTCATTAACTGGATGCCGata                <  5:370059/148‑1 (MQ=255)
                                                                                                                                      tcGTGTAGAGTGAATCTGCGCCACATAGTGG‑GCAATTTCACTGTCAGGATTAGGGGTAAAGGTGGTCAGATTCGCGGTGGTGCTGACGACCTGACGGAAATCATCCACATTGTTGAGTTCATCCAGCGTCATTAACTGGATGCCGa                  <  8:262813/146‑1 (MQ=255)
                                                                                                                                      tcGTGTAGAGTGAATCTGCGCCACATAGTGG‑GCAATTTCACTGTCAGGATTAGGGGTAAAGGTGGTCAGATTCGCGGTGGTGCTGACGACCTGACGGAAATCATCCACATTGTTGAGTTCATCCAGCGTCATTAACTGGATGCCGa                  <  5:89193/146‑1 (MQ=255)
                                                                                                                                         tgtAGAGTGAATCTGCGCCACATAGTGG‑GCAATttcactctacacgacagacaaaggagctttgcgcatgaccactcaactggaacaggcctgggagctagcgaaacagcgtttcgcggcggtgggga                                 <  4:336365‑M2/128‑96 (MQ=255)
                                                                                                                                         tgtAGAGTGAATCTGCGCCACATAGTGG‑GCAATttcactctacacgacagacaaaggagctttgcgcatgaccactcaactggaacaggcctgggagctagcgaaacagcgtttcgcggcggtgggga                                 >  3:336365‑M2/1‑33 (MQ=255)
                                                                                                                                         tgtAGAGTGAATCTGCGCCACATAGTGG‑GCAATTTCACTGTCAGGATTAGGGGTAAAGGTGGTCAGATTCGCGGTGGTGCTGACGACCTGACGGAAATCATCCACATTGTTGAGTTCATCCAGCGTCATTAACTGGATGCCGATATTGc            >  3:295256/1‑149 (MQ=255)
                                                                                                                                              agTGAAattgcccactatgtggcgcagattcactctacacgacagacaaaggagctttgcgcatgaccactcaactggaacaggcctgggagctagcgaaacagcgtttcgcggcggtggggattgatgtcgaggaggcgctgcgccaa        >  8:114399‑M1/1‑6 (MQ=255)
                                                                                                                                              agTGAATCTGCGCCACATAGTGG‑GCAATTTCACTGTCAGGATTAGGGGTAAAGGTGGTCAGATTCGCGGTGGTGCTGGCGACCTGACGGAAATCATCCACATTGTTGAGTTCATCCAGCGTCATTAAc                            <  3:221466/128‑1 (MQ=255)
                                                                                                                                              agTGAATCTGCGCCACATAGTGG‑GCAATTTCACTGTCAGGATTAGGGGTAAAGGTGGTCAGATTCGCGGTGGTGCTGGCGACCTGACGGAAATCATCCACATTGTTGAGTTCATCCAGCGTCATTAAc                            >  4:221466/1‑128 (MQ=255)
                                                                                                                                              agTGAATCTGCGCCACATAGTGG‑GCAATTTCACTGTCAGGATTAGGGGTAAAGGTGGTCAGATTCGCGGTGGTGCTGACGACCTGACGGAAATCATCCACATTGTTGAGTTCATCCAGCGTCATTAACTGGATGCCGATATTGCCGAGc       <  8:347032/149‑1 (MQ=255)
                                                                                                                                               gTGAATCTGCGCCACATAGTGG‑GCAATTTCACTGTCAGGATTAGGGGTAAAGGTGGTCAGATTCGCGGTGGTGCTGACGACCTGACGGAAATCATCCACATTGTTGAGTTCATCCAGCGTCATTAACTGGATGCCGATATTGCCGAGCg      <  3:74589/149‑1 (MQ=255)
                                                                                                                                               gTGAATCTGCGCCACATAGTGG‑GCAATTTCACTGTCAGGATTAGGGGTAAAGGTGGTCAGATTCGCGGTGGTGCTGACGACCTGACGGAAATCATCCACATTGTTGAGTTCATCCAGCGTCATTAACTGGATGCCGATATTGCCGAGCg      <  3:266133/149‑1 (MQ=255)
                                                                                                                                                tGAATCTGCGCCACATAGTGG‑GCAATTTCACTGTCAGGATTAGGGGTAAAGGTGGTCAGATTCGCGGTGGTGCTGACGACCTGACGGAAATCATCCACATTGTTGAGTTCATCCAGCGTCATTAACTGGATGCCGATATTGCCGAGCGt     >  7:69136/1‑149 (MQ=255)
                                                                                                                                                  aaTCTGCGCCACATAGTGG‑GCAATTTCACTGTCAGGATTAGGGGTAAAGGTGGTCAGATTCGCGGTGGTGATGACGACATGACGGAACTCATCCACATTGTTGAGTTCATCCAGAGTCATTAACTGGATGCCGATATTGCCGAGCGTCg   <  4:246310/149‑1 (MQ=255)
                                                                                                                                                   aattgcccactatgtggcgcagattcactctacacgacagacaaaggagctttgcgcatgaccactcaactggaacaggcctgggagctagcgaaacagcgtttcgcggcggtggggattgatgtcgaggaggcgctgcgccaacttga   <  8:200827‑M1/149‑149 (MQ=255)
                                                                                                                                                   aattgcccactatgtggcgcagattcactctacacgacagacaaaggagctttgagcatgaccactcaactggaacaggcctgggagctagcgaaacagcgtttcgcggcggtggggattgatgtcgaggaggcgctgcgccaacttg    >  3:371933‑M1/1‑1 (MQ=255)
                                                                                                                                                   aTCTGCGCCACATAGTGG‑GCAATTTCACTGTCAGGATTAGGGGTAAAGGTGGTCAGATTCGCGGTGGTGCTGACGACCTGACGGAAATCATCCACATTGTTGAGTTCATCCAGCGTCATTAACTGGATGCCGATATTGCCGAGCGTCGa  <  3:335613/149‑1 (MQ=255)
                                                                                                                                                   aTCTGCGCCACATAGTGG‑GCAATTTCACTGTCAGGATTAGGGGTAAAGGTGGTCAGATTCGCGGGGGTGCTGACGACCTGACGGAAATCATCCACATTGTTGAGTTCATCCAGCGTCATTAACTGGATGCCGATATTGCCGAGCGTCGa  <  4:249605/149‑1 (MQ=255)
                                                                                                                                                   |                                                                                                                                                     
GTGCATTGAAACGGGTAAACGATCAAGTTGGCGCAGCGCCTCCTCGACATCAATCCCCACCGCCGCGAAACGCTGTTTCGCTAGCTCCCAGGCCTGTTCCAGTTGAGTGGTCATGCGCAAAGCTCCTTTGTCTGTCGTGTAGAGTGAATCTGCGCCACATAGTGG‑GCAATTTCACTGTCAGGATTAGGGGTAAAGGTGGTCAGATTCGCGGTGGTGCTGACGACCTGACGGAAATCATCCACATTGTTGAGTTCATCCAGCGTCATTAACTGGATGCCGATATTGCCGAGCGTCGA  >  NC_000913/4095869‑4096164

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.