BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	3289918 =	87 (1.050)	3 (0.040)	3/246	NT	3.5%	coding (1105/2517 nt)	yraJ	putative outer membrane protein
*	?	NC_000913	3289945 =	84 (1.070)	3 (0.040)	3/246	NT	3.5%	coding (1132/2517 nt)	yraJ	putative outer membrane protein
Rejected: Frequency below/above cutoff threshold.

Only 100 of 103 total aligned reads displayed.

GGTGCCTTTGAAATTAACGATCTCTACCCCTCTTCCAACAGCGGCGATTTAGAAGTCACGATTGAAGAAAGTGACGGTACACAACGTCGCTTTATCCAGCCTTATTCTTCATTACCCATGATGCAGCGACCTGGGCATCTAAAGTATAGCGCGACCGCTGGACGCTATCGCGCTGATGCAAACAGTGATAGCAAGGAACCCGAATTTGCTGAAGCCACGGCAATATATGGTTTGAATAATACTTTTACGCTGTATGGCGGCCTGCTCGGTTCTGAAGATTATTATGCGCTGGGGA  >  NC_000913/3289771‑3290065

ggTGCCTTTGAAATTAACGATCTCTACCCCTCTTCCAACAGCGGCGATTTAGAAGTCACGATTGAAGAAAGTGACGGTACACAACGTCGCTTTATCCAGCCTTATTCTTCATTACCCATGATGCAGCGACCTGGGCATCTAAAGtata                                                                                                                                                     <  8:104335/148‑1 (MQ=255)

 gTGCCTTTGAAATTAACGATCTCTACCCCTCTTCCAACAGCGGCGATTTAGAAGTCACGATTGAAGAAAGTGACGGTACACAACGTCGCTTTATCCAGCCTTATTCTTCATTACCCATGATGCAGCGACCTGGGCATCTAAAGTATAg                                                                                                                                                    <  8:14984/148‑1 (MQ=255)

 gTGCCTTTGAAATTAACGATCTCTACCCCTCTTCCAACAGCGGCGATTTAGAAGTCACGATTGAAGAAAGTGACGGTACACAACGTCGCTTTATCCAGCCTTATTCTTCATTACCCATGATGCAGCGACCTGGGCATCTAAAGTATAg                                                                                                                                                    >  4:272607/1‑148 (MQ=255)

  cgccaagtgtgccgccgatatcgatccccagcgcataataatcttcagaaccgagcaggccgccatacagcgtaaaagtattattcaaaccatatattgccgtggcttcagcaaattcgggttccttgctatcactgtttgcatcAgc                                                                                                                                                   >  7:290647‑M1/146‑148 (MQ=255)

    ccaagtgtgccgccgataccgatccccagcgcataataatcttcagaaccgagcaggccgccatacagcgtaaaagtattattcaaaccatatattgccgtggcttcagcaaattcgggttccttgctatcactgtttgcatcAgcgc                                                                                                                                                 <  7:233617‑M1/5‑1 (MQ=255)

     caagtgtgccgccgataccgatccccagcgcataataatcttcagaaccgagcaggccgccatacagcgtaaaagtattattcaaaccatatattgccgtggcttcagcaaattcgggttccttgctatcactgtttgcatcAgcgc                                                                                                                                                 <  4:100612‑M1/5‑1 (MQ=255)

     caagtgtgccgccgataccgatccccagcgcataagaatcttcagaaccgagcaggccgccatacagcgtaaaagtattattcaaaccttatattgccgtggcttcagcaaattcgggtaccttgctatcactgtttgcatcAgcgc                                                                                                                                                 <  8:341130‑M1/5‑1 (MQ=255)

      tttGAAATTAACGATCTCTACCCCTCTTCCAACAGCGGCGATTTAGAAGTCACGATTGAAGAAAGTGACGGTACACAACGTCGCTTTATCCAGCCTTATTCTTCATTACCCATGATGCAGCGACCTGGGCATCTAAAGTATAGCGCGa                                                                                                                                               >  1:376228/1‑148 (MQ=255)

      aagtgtgccgccgataccgatccccagcgcataatcatcttcagaaccgagcaggccgccatacagcgtaaaagtattattcacaccatatattgccgtggcttcagcaaattcgggttccttgctatcactgtttgcatcagctc                                                                                                                                                 <  3:241982‑M1/5‑3 (MQ=255)

      aagtgtgccgccgataccgatccccagcgcataataatcttcagaaccgagcaggccgccatacagcgtaaaagtattattcaaaccatatattgccgtggcttcagcaaattcgggttccttgctatcactgtttgcatcAGCGCGa                                                                                                                                               <  7:292400‑M1/7‑1 (MQ=255)

              tAACGATCTCTACCCCTCTTCCAACAGCGGCGATTTAGAAGTCACGATTGAAGAAAGTGACGGTACACAACGTCGCTTTATCCAGCCTTATTCTTCATTACCCATGATGCAGCGACCTGGGCATCTAAAGTATAGCGCGACCGCTGGa                                                                                                                                       >  5:235935/1‑148 (MQ=255)

               aaCGATCTCTACCCCTCTTCCAACAGCGGCGATTTAGAAGTCACGATTGAATAAAGTGACGGTACACAACGTCGCTTTATCCAGCCTTATTCTTCATTACCCATGATGCAGAGACCTGGGCATCTAAAGTATAGCGCGACCGCTGGa                                                                                                                                       <  3:232109/147‑1 (MQ=255)

                 cGATCTCTACCCCTCTTCCAACAGCGGCGATTTAGAAGTCACGATTGAAGAAAGTGACGGTACACAACGTCGCTTTATCCAGCCTTATTCTTCATTACCCATGATGCAGCGACCTGGGCATCTAAAGTATAGCGCGACCGCTg                                                                                                                                         >  8:343713/1‑143 (MQ=255)

                 cGATCTCTACCCCTCTTCCAACAGCGGCGATTTAGAAGTCACGATTGAAGAAAGTGACGGTACACAACGTCGCTTTATCCAGCCTTATTCTTCATTACCCATGATGCAGCGACCTGGGCATCTAAAGTATAGCGCGACCGCTg                                                                                                                                         <  7:343713/143‑1 (MQ=255)

                       ctACCACTCTTCAAACAGCGGCGATTTAGAAGTCACGATTGAAGAAAGTGACGGTACACACCGTCGCTTTATCCAGCCTTATTATTCATTACACATGATGCCGCGACCTCGGCATCTAAAGTATAGCCCGACCGCTGGACGCTATcgc                                                                                                                              >  4:141217/1‑148 (MQ=255)

                        tACCCCTCTTCCAACAGCGGCGATTTAGAAGTCACGATTGAAGAAAGTGACGGTACACAACGTCGCTTTATCCAGCCTTATTCTTCATTACCCATGATGCAGCGACCTGGGCATCTAAAGTATAGCGCGACCGCTGGACGCTAt                                                                                                                                 <  5:210461/144‑1 (MQ=255)

                         aCCCCTCTTCCAACAGCGGCGATTTAGAAGTCACGATTGAAGAAAGTGCCGGTACACAACGTCGCTTTATACAGACTTAGTCGTCCTTACCCATGATGCAGCGACCTGGGCATCTAAAGTATTGCTCGACCGCTGGCCGCTATCgcgc                                                                                                                            >  4:241982/1‑148 (MQ=255)

                          ccccTCTTCCAACAGCGGCGATTTAGAAGTCACGATTGAAGAAAGTGACGGTACACAACGTCGCTTTATCCAGCCTTATTCTTCATTACCCATGATGCAGCGACCTGGGCATCTAAAGTATAGCGCGACCGCTGGACGCTATCgcgc                                                                                                                            <  4:144832/147‑1 (MQ=255)

                             ctctTCCAACAGCGGCGATTTAGAAGTCACGATTGAAGAAAGTGACGGTACACAACGTCGCTTTATCCAGCCTTATTCTTCATTACCCATGATGTAGCGACCTGGGCATCTAAAGTATAGCGCGACCGCTGGACGCTATCGCGCTGAt                                                                                                                        >  1:131226/1‑148 (MQ=255)

                               ctTCCAACAGCGGCGATTTAGAAGTCACGATGGAAGAAAGTGCCGGTACACAACGTCGCTTTATCCAGCCTTATTCTTCATTACCCATGATGCAGCGACCTGGGCATCTAAAGTATAGCGCGACCGCTGGACGCTATCGCGCTGATg                                                                                                                       >  4:79107/1‑147 (MQ=255)

                                 tCCAACAGCGGCGATTTAGAAGTCACGATTGAAGAAAGTGACGGTACACAACGTCGCTTTATCCAGCCTTATTCTTCATTACCCATGATGCAGCGACCTGGGCATCTAAAGTATAGCGCGACCGCTGGACGCTATCGCGCTGATGCa                                                                                                                     >  6:256673/1‑147 (MQ=255)

                                 tCCAACAGCGGCGATTTAGAAGTCACGATTGAAGAAAGTGACGGTACACAACGTCGCTTTATCCAGCCTTATTCTTCATTACCCATGATGCAGCGACCTGGGCATCTAAAGTATAGCGCGACCGCTGGACGCTATCGCGCTGATGCa                                                                                                                     >  2:280844/1‑147 (MQ=255)

                                   cAACAGCGGCGATTTAGAAGTCACGATTGAAGAAAGTGACGGTACACAACGTCGCTTTATCCAGCCTTATTCTTCATTACCCATGATGCAGCGACCTGGGCATCTAAAGTATAGCGCGACCGCTGGACGCTATCGCGCTGATGCaaa                                                                                                                   >  7:130277/1‑147 (MQ=255)

                                   cAACAGCGGCGATTTAGAAGTCACGATTGAAGAAAGTGACGGTACACAACGTCGCTTTATCCAGCCTTATTCTTCATTACCCATGATGCAGCGACCTGGGCATCTAAAGTATAGCGCGACCGCTGGACGCTATCGCGCTGATGCAAAc                                                                                                                  <  2:49602/148‑1 (MQ=255)

                                   cAACAGCGGCGATTTAGAACTCACGATTGAAGAAAGTGACGGTACACCACGTCGCTTTATCCAGCCTTATTCTTCATTACCCATGATGCAGCGACCTGGGCATCTAAAGTATAGCGCGACCGCTGGACGCTATCGCGCTGATGCAAAc                                                                                                                  <  3:275954/148‑1 (MQ=255)

                                    aaCAGCGGCGATTTAGAAGTCACGATTGAAGAAAGTGACGGTACACAACGTCGCTTTATCCAGCCTTATTCTTCATTACCCATGATGCAGCGACCTGGGCATCTAAAGTATAGCGCGACCGCTGGACGCTATCGCGCTGATGCaaa                                                                                                                   >  3:240063/1‑146 (MQ=255)

                                      cAGCGGCGATTTAGAAGTCACGATTGAAGAAAGTGACGGTACACCACGTCGCTTTATCCAGCCTTATTCTTCATTACCCATGATGCAGCGACCTGGGCAGCTAAAGTATAGCGCGACCGCTGGACGCTATCGCGCTGATGCAATCAGt                                                                                                               <  3:14621/148‑1 (MQ=255)

                                      cAGCGGCGATTTAGAAGTCACGATTGAAGAAAGTGACGGTACACAACGTCGCTTTATCCAGCCTTATTCTTCTTTACCCATGATGCAGCGACCTGGGCATCTAAAGTATAGCGCGACCGCTGGACGCTATCGCGCTGATGCAAACAGt                                                                                                               <  6:235935/148‑1 (MQ=255)

                                      cAGCGGCGATTTAGAAGTCACGATTGAAGAAAGTGACGGTACACAACGTCGCTTTATCCAGCCTTATTCTTCATTACCCATGATGCAGCGACCTGGGCATCTAAAGTATAGCGCGACCGCTGGACGCTATCGCGCTGATGCAAACAGt                                                                                                               >  4:132077/1‑148 (MQ=255)

                                       aGCGGCGATTTAGAAGTCACGATTGAAGAAAGTGACGGTACACAACGTCGCTTTATCCAGCCTTATTCTTCATTACCCATGATGCAGCGCCCTGGGCATCTAAAGTATAGCGCGACCGCTGGACGCTATCGCGCTGATGCAAACAGt                                                                                                               >  8:292400/1‑147 (MQ=255)

                                       aGCGGCGATTTAGAAGTCACGATTGAAGAAAGTGACGGTACACAACGTCGCTTTATCCAGCCTTATTCTTCAATACCCATGATGCAGCGACCTGGGCATCTAAAGTATAGCGCGACCGCTGGACGCTATCGCGCTGATGCAAACAGTg                                                                                                              <  2:46773/148‑1 (MQ=255)

                                        gcggcgATTTAGAAGTCACGATTGAAGAAAGTGACGGTACACAACGTCGCTTTATCCAGCCTTATTCTTCATTACCCATGATGCAGCGACCTGGGCATCTAAAGTATAGCGCGACCGCTGGACGCTATCGCGCTGATGCAAACAGTGa                                                                                                             <  7:107171/148‑1 (MQ=255)

                                         cggcgATTTAGAAGCCACGATTGAAGAAAGTGACGGTACACAACGTCGCTTTATCCAGCCATATTCTTCATTACCCATGATGCAGCGACCTGGGCATCTAAAGTATAGCGCGACCGCTGGACGCTATCGCGCTGATGCAAACAGTGAt                                                                                                            <  1:183037/148‑1 (MQ=255)

                                          ggcgATTTAGAAGTCACGATTGAAGAAAGTGACGGTACACAACGTCGCTTTATCCAGCCTTATTCTTCATTACCCATGATGCAGCGACCTGGGCATCTAAAGTATAGCGCGACCGCTGGACGCTATCGCGCTGATGCAAACAGTGAt                                                                                                            <  1:385652/147‑1 (MQ=255)

                                           gcgATTTAGAAGTCACGATTGAAGAAAGTGACGGTACACAACGTCGCTTTATCCAGCCTTATTCTTCATTACCCATGATGCAGCGACCTGGGCATCTAAAGTATAGCGCGACCGCTGGACGCTATCGCGCTGATGCAAACAGTGa                                                                                                             >  2:385652/1‑145 (MQ=255)

                                             gATTTAGAAGTCACGATTGAAGAAAGTGACGGTACACAACGTCGCTTTATCCAGCCTTATTCTTCATTACCCATGATGCAGCGACCTGGGCATCTAAAGTATAGCGCGACCGCTGGACGCTATCGCGCTGATGCAAACAGTGATAGCa                                                                                                        <  1:280844/148‑1 (MQ=255)

                                              aTTTAGAAGTCACGATTGAAGAAAGTGACGGTACACAACGTCGCTTTATCCAGCCTTATTCTTCATTACCCATGATGCAGCGACCTGGGCATCTAAAGTATAGCGCGACCGCTGGACGCTATCGCGCTGATGCAAACAGTGATAGc                                                                                                         >  7:22741/1‑146 (MQ=255)

                                                ttAGAAGTCACGATTGAAGAAAGTGACGGTACACAACGTCGCTTTATCCAGCCTTATTCTTCATTACCCATGATGCAGCGACCTGGGCATCTAAAGTATAGCGCGACCGCTGGACGCTATCGCGCTGATGCAAACAGTGATAGCAAg                                                                                                      >  7:160655/1‑147 (MQ=255)

                                                 tAGAAGTCACGATTGAAGAAAGTGACGGTACACAACGTCGCTTTATCCAGCCTTATTCTTCATTACCCATGATGCAGCGACCTGGGCATCTAAAGTATAGCGCGACCGCTGGACGCTATCGCGCTGATGCAAACAGTGATAGCAAgg                                                                                                     <  8:370682/147‑1 (MQ=255)

                                                  aGAAGTCACGATTGAAGAAAGTGACGGTACACAACGTCGCTTTATCCAGCCTTATTCTTCATTACCCATGATGCAGCGACCTGGGCATCTAAAGTATAGCGCGACCGCTGGACGCTATCGCGCTGATGCAAACAGTGATAGCAAGGa                                                                                                    <  3:57438/147‑1 (MQ=255)

                                                  aGAAGTCACGATTGAAGAAAGTGACGGTACACAACGTCGCTTTATCCAGCCTTATTCTTCATTACCCATGATGCAGCGACCTGGGCATCTAAAGTATAGCGCGACCGCTGGACGCTATCGCGCTGATGCAAACAGTGATAGCAAGGa                                                                                                    <  3:167161/147‑1 (MQ=255)

                                                     aGTCACGATTGAAGAAAGTGACGGTACACAACGTCGCTTTATCCAGCCTTATTCTTCATTACCCATGATGCAGCGACCTGGGCATCTAAAGTATAGCGCGACCGCTGGACGCTATCGCGCTGATGCAAACAGTGATAGCAAGGAAccc                                                                                                <  3:318309/148‑1 (MQ=255)

                                                       tCACGATTGAAGAAAGTGACGGTACACAACGTCGCTTTATCCAGCCTTATTCTTCATTACCCATGATGCAGCGACCTGGGCATCTAAAGTATAGCGCGACCGCTGGACGCTATCGCGCTGATGCAAACAGTGATAGCAAGGAACCCg                                                                                               >  8:328329/1‑147 (MQ=255)

                                                        cACGATTGAAGAAAGTGACGGTACACAACGTCGCTTTATCCAGCCTTATTCTTCATTACCCATGATGCAGCGACCTGGGCATCTAAAGTATAGCGCGACCGCTGGACGCTATCGCGCTGATGCAAACAGTGa                                                                                                             <  3:9931/132‑1 (MQ=255)

                                                        cACGATTGAAGAAAGTGACGGTACACAACGTCGCTTTATCCAGCCTTATTCTTCATTACCCATGATGCAGCGACCTGGGCATCTAAAGTATAGCGCGACCGCTGGACGCTATCGCGCTGATGCAAACAGTGa                                                                                                             >  4:9931/1‑132 (MQ=255)

                                                         aCGATTGAAGAAAGTGACGGTACACAACGTCGCTTTATCCAGCCTTATTCTTCATTACCCATGATGCAGCGACCTGGGCATCTAAAGTATAGCGCGACCGCTGGACGCTATCGCGCTGATGCAAACAGGGATAGCAAGGAACACGAAt                                                                                            >  7:341130/1‑148 (MQ=255)

                                                           gATTGAAGAAAGTGACGGTACACAACGTCGCTTTATCCAGCCTTATTCTTCATTACCCATGATGCAGCGACCTGGGCATCTAAAGTATAGCGCGACCGCTGGACGCTATCGCGCTGATGCAAACAGTGATAGCAAGGAACCCGAAttt                                                                                          >  7:165953/1‑148 (MQ=255)

                                                               gaagaaAGTGACGGTACACAACGTCGCTTTATCCAGCCTTATTCTTCATTACCCATGATGCAGCGACCTGGGCATCTAAAGTATAGCGCGACCGCTGGACGCTATCGCGCTGATGCAAACAGTGATAGCAAGGAACCCGAATTTGCt                                                                                       <  8:130277/147‑1 (MQ=255)

                                                                aagaaAGTGACGGTACACAACGTCGCTTTATCCAGCCTTATTCTTCATTACCCATGATGTAGCGACCTGGGCATCTAAAGTATAGCGCGACCGCTGGACGCTATCGCGCTGATGCAAACAGTGATAGCAAGGAACCCGAATTTGCTGa                                                                                     <  2:131226/148‑1 (MQ=255)

                                                                    acagcgtaaaagtattattcaaaccatatattgccgtggcttcagcaaattcgggttccttgctatcactgtttgcatcAGCGCGACCGCTGGACGCTATCGCGCTGa                                                                                                                         <  3:159349‑M1/29‑1 (MQ=255)

                                                                    acagcgtaaaagtattattcaaaccatatattgccgtggcttcagcaaattcgggttccttgctatcactgtttgcatcAGCGCGACCGCTGGACGCTATCGCGCTGa                                                                                                                         >  4:159349‑M1/80‑108 (MQ=255)

                                                                    aaGTGACGGTACACAACGTCGCTTTATCCAGCCTTATTCTTCATTACCCATGATGCAGCGACCTGGGCATCTAAAGTATAGCGCGACCGCTGGACGCTATCGCGCTGATGCAAACAGTGATAGCAAGGAACCCGAATTTGCTGAAGcc                                                                                 <  8:382064/148‑1 (MQ=255)

                                                                    aaGTGACGGTACACAACGTCGCTTTATCCAGCCTTATTCTTCATTACCCATGATGCAGCGACCTGGGCATCTAAAGTATAGCGCGACCGCTGGACGCTATCGCGCTGATGCAAACAGTGATAGCAAGGAACCCGAATTTGCTGAAGc                                                                                  >  7:382064/1‑147 (MQ=255)

                                                                    aaGTGACGGTACACAACGTCGCTTTATCCAGCCTTATTCTTCATTACCCATGATGCAGCGACCTGGGCATCTAAAGTATAGCGCGACCGCTGGACGCTATCGCGCTGATGCAAACAGTGATAGCAAGGAACCCGAATTTGCTGAAGc                                                                                  >  2:289260/1‑147 (MQ=255)

                                                                            gTACACAACGTCGCTTTATCCAGCCTTATTCTTCATTACCCATGATGCAGCGACCTGGGCATCTAAAGTATAGCGCGACCGCTGGACGCTATCGCGCTGATGCAAACAGTGATAGCAAGGAACCCGAATTTGCTGAAGCCACGGCAat                                                                         <  4:180503/148‑1 (MQ=255)

                                                                             tACACAACGTCGCTTTATCCAGCCTTATTCTTCATTACCCATGATGCAGCGACCTGGGCATCTAAAGTATAGCGCGACCGCTGGACGCTATCGCGCTGATGCAAACAGTGATAGCAAGGAACCCGAATTTGCTGAAGCCACGGCAata                                                                        <  4:240063/148‑1 (MQ=255)

                                                                               cacaACGTCGCTTTATCCAGCCTTTTTCTTCTTTAGCCATGATGCAGCGACCTGGGCATCTAAAGTATAGCGCGACCGCTGGACGCTATCGCGCTGATGCAAACTGTGATAGCAAGGAACCCGAATTTGCTGAAGCCACGGCAatat                                                                       <  5:84110/147‑1 (MQ=255)

                                                                                 caACGTCGCTTTATCCAGCCTTATTCTTCATTACCCATGATGCAGCGACCTGGGCATCTAAAGTATAGCGCGACCGCTGGACGCTATCGCGCTGATGCAAACAGTGATAGCAAGGAACCCGAATTTGCTGAAGCCACGGCAATATATg                                                                    >  8:212199/1‑148 (MQ=255)

                                                                                   aCGTCGCTTTATCCAGCCTTATTCTTCATTACCCATGATGCAGCGACCTGGGCATCTAAAGTATAGCGCGACCGCTGGACGCTATCGCGCTGATGCAAACAGTGATAGCAAGGAACCCGAATTTGCTGAAGCCACGGCAATATATGGt                                                                  >  8:233617/1‑148 (MQ=255)

                                                                                    cGTCGCTTTATCCAGCCTTATTCTTCATTACCCATGATGCAGCGACCTGGGCATCTAAAGTATAGCGCGACCGCTGGACGCTATCGCGCTGATGCAAACAGTGATAGCAAGGAACCCGAATTTGCTGAAGCCACGGCAATATATGGtt                                                                 <  1:376727/148‑1 (MQ=255)

                                                                                    cGTCGCTTTATCCAGCCTTATTCTTCATTACCCATGATGCAGCGACCTGGGCATCTAAAGTATAGCGCGACCGCTGGACGCTATCGCGCTGATGCAAACAGTGATAGCAAGGAACCCGAATTTGCTGAAGCCACGGCAATATATGGtt                                                                 <  3:132077/148‑1 (MQ=255)

                                                                                      tCGCTTTATCCAGCCTTATTCTTCATTACCCATGATGCAGCGACCTGGGCATCTAAAGTATAGCGCGACCGCTGGACGCTATCGCGCTGATGCAAACAGTGATAGCAAGGAACCCGAATTTGCTGAAGCCACGGCAATATATGGTTTg                                                               <  1:289260/148‑1 (MQ=255)

                                                                                        gCTTTATCCAGCCTTATTCTTCATTACCCATGATGCAGCGACCTGGGCATCTAAAGTATAGCGCGACCGCTGGACGCTATCGCGCTGATGCAAACAGTGATAGCAAGGAACCCGAATTTGCTGAAGCCACGGCAATATATGGTTTGa                                                              <  2:376228/147‑1 (MQ=255)

                                                                                         cTTTATCCAGCCTTATTCTTCATTACCCATGATGCAGCGACCTGGGCATCTAAAGTATAGCGCGACCGCTGGACGCTATCGCGCTGATGCAAACAGTGATAGCAAGGAACCCGAATTTGCTGAAGCCACGGCAATATATGGTTTGaat                                                            <  8:165953/148‑1 (MQ=255)

                                                                                          tttATCCAGCCTTATTCTTCATTACCCATGATGCAGCGACCTGGGCATCTAAAGTATAGCGCGACCGCTGGACGCTATCGCGCTGATGCAAACAGTGATAGCAAGGAACCCGAATTTGCTGAAGCCACGGCAATATATGGTTTGaat                                                            >  6:322071/1‑147 (MQ=255)

                                                                                          tttATCCAGCCTTATTCTTCATTACCCATGATGCAGCGACCTGGGCATCTAAAGTATAGCGCGACCGCTGGACGCTATCGCGCTGATGCAAACAGTGATAGCAAGGAACCCGAATTTGCTGAAGCCACGGCAATATATGGTTTGaat                                                            >  8:156234/1‑147 (MQ=255)

                                                                                          tttATCCAGCCTTATTCTTCATTACCCATGATGCAGCGACCTGGGCATCTAAAGTATAGCGCGACCGCTGGACGCTATCGCGCTGATGCAAACAGTGATAGCAAGGAACCCGAATTTGCTGAAGCCACGGCAATATATGGTTTGaat                                                            >  6:164732/1‑147 (MQ=255)

                                                                                              tCCAGCCTTATTCTTCATTACCCATGATGCAGCGACCTGGGCATCTAAAGTATAGCGCGACCGCTGGACGCTATCGCGCTGATGCAAACAGTGATAGCAAGGAACCCGAATTTGCTGAAGCCACGGCAatatat                                                                     <  6:26977/134‑1 (MQ=255)

                                                                                              tCCAGCCTTATTCTTCATTACCCATGATGCAGCGACCTGGGCATCTAAAGTATAGCGCGACCGCTGGACGCTATCGCGCTGATGCAAACAGTGATAGCAAGGAACCCGAATTTGCTGAAGCCACGGCAatatat                                                                     >  5:26977/1‑134 (MQ=255)

                                                                                              tCCAGCCTTATTCTTCATTACCCATGATGCAGCGACCTGGGCATCTAAAGTATAGCGCGACCGCTGGACGCTATCGCGCTGATGCAAACAGTGATAGCAAGGAACCCGAATTTGCTGAAGCCACGGCAATATATGGTTTGAATAATAc                                                       <  7:328329/148‑1 (MQ=255)

                                                                                                cAGCCTTATTCTTCATTACCCATGATGCAGCGACCTGGGCATCTAAAGTATAGCGCGACCGCTGGACGCTATCGCGCTGATGCAAACAGTGATAGCAAGGAACCCGAATTTGCTGAAGCCACGGCAATATATGGTTTGAATAATACtt                                                     >  7:133179/1‑148 (MQ=255)

                                                                                                     ttATTCTTCATTACCCATGATGCAGCGACCTGGGCATCTAAAGTATAGCGCGACCGCTGGACGCTATCGCGCTGATGCAAACAGTGATAGCAAGGAACCCGAATTTGCTGAAGCCACGGCAATATATGGTTTGAATAATACTTTTACg                                                >  4:31168/1‑148 (MQ=255)

                                                                                                          cttcATTACCCATGATGCAGCGACCTGGGCATCTAAAGTATAGCGCGACCGCTGGACGCTATCGCGCTGATGCAAACAGTGATAGCAAGGAACCCGAATTTGCTGAAGCCACGGCAATATATGGTTTGAATAATACTTTTACGCTGt                                            <  7:181911/147‑1 (MQ=255)

                                                                                                          cttcATTACCCATGATGCAGCGACCTGGGCATCTAAAGTATAGCGCGACCGCTGGACGCTATCGCGCTGATGCAAACAGTGATACCAAGGAACCCGAATTTGCTGAAGCCACGGCAATATATGGTTTGAATAATACTTTTACGCTGt                                            <  8:160655/147‑1 (MQ=255)

                                                                                                            tcATTACCCATGATGCAGCGACCTGGGCATCTAAAGTATAGCGCGACCGCTGGACGCTATCGCGCTGATGCAAACAGTGATAGCAAGGAACCCGAATTTGCTGAAGCCACGGCAATATATGGTTTGAATAATACtttt                                                   <  2:319716/138‑1 (MQ=255)

                                                                                                            tcATTACCCATGATGCAGCGACCTGGGCATCTAAAGTATAGCGCGACCGCTGGACGCTATCGCGCTGATGCAAACAGTGATAGCAAGGAACCCGAATTTGCTGAAGCCACGGCAATATATGGTTTGAATAATACtttt                                                   >  1:319716/1‑138 (MQ=255)

                                                                                                            tcATTACCCATGATGCAGCGACCTGGGCATCTAAAGTATAGCGCGACCGCTGGACGCTATCGCGCTGATGCAAACAGTGATAGCAAGGAACCCGAATTTGCTGAAGCCACGGCAATATATGGTTTGAATAATACTTTTACGCTGTATg                                         >  2:150739/1‑148 (MQ=255)

                                                                                                            tcATTACCCATGATGCAGCGACCTGGGCATCTAAAGTATAGCGCGACCGCTGGACGCTATCGCGCTGATGCAAACAGTGATAGCAAGGAACCCGAATTTGCTGAAGCCACGGCAATATATGGTTTGAATAATACTTTTACGCTGTATg                                         >  3:100612/1‑148 (MQ=255)

                                                                                                              aTTACCCATGATGCAGCGACCTGGGCATCTAAAGTATAGCGCGACCGCTGGACGCTATCGCGCTGATGCAAACAGTGATAGCAAGGAACCCGAATTTGCTGAAGCCACGGCAATATATGGTTTGAATAATACTTTTACGCTGTATggc                                       <  8:133179/148‑1 (MQ=255)

                                                                                                                        atgCAGCGACCTGGGCATCTAAAGTATAGCGCGACCGCTGGACGCTATCGCGCTGATGCAAACAGTGATAGCAAGGAACCCGAATTTGCTGAAGCCACGGCAATATATGGTTTGAATAATACTTTTACGCTGTATGGCGGCCTGCTc                              <  3:272607/147‑1 (MQ=255)

                                                                                                                             gCGACCTGGGCATCTAAAGTATAGCGCGACCGCTGGACGCTATCGCGCTGATGCAAACAGTGATAGCAAGGAACCCGAATTTGCTGAAGCCACGGCAATATATGGTTTGAATAATACTTTTACGCTGTATGGCGGCCTGCTCGGTTCt                        >  2:113023/1‑148 (MQ=255)

                                                                                                                             gCGACCT‑GGCATCTAAAGTATAGCGCGACCGCTGGACGCTATCGCGCTGATGCAAACAGTGATAGCAAGGAACCCGAATTTGCTGAAGCCACGGCAATATATGGTTTGAATAATACTTTTACGCTGTATGGCGGCCTGCTCGGTTCTg                       <  4:168488/148‑1 (MQ=255)

                                                                                                                              cGACCTGGGCATCTAAAGTATAGCGCGACCGCTGGACGCTATCGCGCTGATGCAAACAGTGATAGCAAGGAACCCGAATTTGCTGAAGCCAGGGCAATATTTGGTTTGAATAATACTTTAACGCTGTATGGCGGCGGGCTCGGTACt                        >  4:114184/1‑147 (MQ=255)

                                                                                                                                tgctatcactgtttgcatcAGCGCGATAGCGTCCAGCGGTCGCGCTGATGCAAACAGTGATAGCAAGGAACCCGAATTTGCTGAGGCCACGGCAAGATATGGGTTGAATAATACTGTGACGCTGTATGGCGGCCTGCTCGGTTCTg                       <  1:69837‑M1/127‑1 (MQ=255)

                                                                                                                                 ccTGGGCATCTAAAGTATAGCGCGACCGCTGGACGCTATCGCGCTGATGCAAACAGTGATAGCAAGGAACCCGAATTTGCTGCAGCCACGGCAATATATGGTTTGAATAATACTTTTACGCTGTATGGCGGCCTGCTCGGTTCTg                       >  4:192779/1‑145 (MQ=255)

                                                                                                                                 ccTGGGCATCTAAAGTATAGCGCGACCGCTGGACGCTATCGCGCTGATGCAAACAGTGATAGCAAGGAACCCGAATTTGCTGAAGCCACGGCAATATATGGTTTGAATAATACTTTTACGCTGTATGGCGGCCTGCTCGGTTCTGAAg                    <  8:22741/148‑1 (MQ=255)

                                                                                                                                   tGGGCATCTAAAGTATAGCGCGACCGCTGGACGCTATCGCGCTGATGCAAACAGTGATAGCAAGGAACCCGAATTTGCTGAAGCCACGGCAATATATGGTTTGAATAATACTTTTACGCTGTATGGCGGCCTGCTCGGTTCTGAAGat                  >  5:178453/1‑148 (MQ=255)

                                                                                                                                       cATCTAAAGTATAGCGCGACCGCTGGACGCTATCGCGCTGATGCAAACAGTGATAGCAAGGAACCCGAATTTGCTGAAGCCACGGCAATATATGGTTTGAATAATACTTTTACGCTGTATGGCGGCCTGCTCGGTTCTGAAGattatt              <  5:256673/148‑1 (MQ=255)

                                                                                                                                          cTAAAGTATAGCGCGACCGCTGGACGCTATCGCGCTGATGCAAACAGTGATAGCAAGGAACCCGAATTTGCTGAAGCCACGGCAATATATGGTTTGAATAATACTTTTACGCTGt                                            <  7:99257/115‑1 (MQ=255)

                                                                                                                                          cTAAAGTATAGCGCGACCGCTGGACGCTATCGCGCTGATGCAAACAGTGATAGCAAGGAACCCGAATTTGCTGAAGCCACGGCAATATATGGTTTGAATAATACTTTTACGCTGTATGGCGGCCTGCTCGGTTCTGAAGATTATTATg           >  7:355918/1‑148 (MQ=255)

                                                                                                                                          cTAAAGTATAGCGCGACCGCTGGACGCTATCGCGCTGATGCAAACAGTGATAGCAAGGAACCCGAATTTGCTGAAGCCACGGCAATATATGGTTTGAATAATACTTTTACGCTGTATGGCGGCCTGCTCGGTTCTGAAGATTATTATg           >  3:253871/1‑148 (MQ=255)

                                                                                                                                          cTAAAGTATAGCGCGACCGCTGGACGCTATCGCGCTGATGCAAACAGTGATAGCAAGGAACCCGAATTTGCTGAAGCCACGGCAATATATGGTTTGAATAATACTTTTACGCTGTATGGCGGCCTGCTCGGTTCTGAAGATTATTATg           >  5:140608/1‑148 (MQ=255)

                                                                                                                                          cTAAAGTATAGCGCGACCGCTGGACGCTATCGCGCTGATGCAAACAGTGATAGCAAGCAACCCGAATTTGCTGAAGCCACGGCAATAAATGGTTTGAATAATACTTGTACGCTGTATGGCGGCCTGCTCGGTTCTGAAGATTATTATg           >  2:269183/1‑148 (MQ=255)

                                                                                                                                            aaaGTATAGCGCGACCGCTGGACGCTATCGCGCTGATGCAAACAGTGATAGCAAGGAACCCGAATTTGCTGAAGCCACGGCAATATATGGTTTGAATAATAc                                                       <  1:132839/102‑1 (MQ=255)

                                                                                                                                            aaaGTATAGCGCGACCGCTGGACGCTATCGCGCTGATGCAAACAGTGATAGCAAGGAACCCGAATTTGCTGAAGCCACGGCAATATATGGTTTGAATAATAc                                                       >  2:132839/1‑102 (MQ=255)

                                                                                                                                            aaaGTATAGCGCGACCGCTGGACGCTATCGCGCTGATGCAAACAGTGATAGCAAGGAACCCGAATTTGCTGAAGCCACGGCAATATATGGTTTGAATAATACTTTTACGCTGTATGGCGGCCTGCTCGGTTCTGAAGATTATTATgcg         >  7:182893/1‑148 (MQ=255)

                                                                                                                                                 ataGCGCGACCGCTGGACGCTATCGCGCTGATGCAAACAGTGATAGTAAGGAACCCGAATTTGCTGAAGCCACGGCAATATATGGTTTGAATAATACTTTTACGCTGTATGGCGGCCTGCTCGGTTCTGAAGattat               >  7:72461/1‑137 (MQ=255)

                                                                                                                                                 ataGCGCGACCGCTGGACGCTATCGCGCTGATGCAAACAGTGATAGTAAGGAACCCGAATTTGCTGAAGCCACGGCAATATATGGTTTGAATAATACTTTTACGCTGTATGGCGGCCTGCTCGGTTCTGAAGattat               <  8:72461/137‑1 (MQ=255)

                                                                                                                                                 ataGCGCGACCGCTGGACGCTATCGCGCTGATGCAAACAGTGATAGCAAGGAACCCGAATTTGCTGAAGCCACGGCAATATATGGTTTGAATAATACTTTTACGCTGTATGGCGGCCTGCACGGTTCTGAAGATTATTATGCGCTgg     <  7:156234/147‑1 (MQ=255)

                                                                                                                                                   AGCGCGACCGCTGGACGCTATCGCGCTGATGCAAACAGTGATAGCAAGGAACCCGAATTTGCTGAAGCCACGGCAATATATGGTTTGAATAATACTTTTACGCTGTATGGCGGCCTGCTCGGTTCTGAAGATTAGTATGCGCTGGGGa  <  1:346169‑M1/148‑1 (MQ=255)

GGTGCCTTTGAAATTAACGATCTCTACCCCTCTTCCAACAGCGGCGATTTAGAAGTCACGATTGAAGAAAGTGACGGTACACAACGTCGCTTTATCCAGCCTTATTCTTCATTACCCATGATGCAGCGACCTGGGCATCTAAAGTATAGCGCGACCGCTGGACGCTATCGCGCTGATGCAAACAGTGATAGCAAGGAACCCGAATTTGCTGAAGCCACGGCAATATATGGTTTGAATAATACTTTTACGCTGTATGGCGGCCTGCTCGGTTCTGAAGATTATTATGCGCTGGGGA  >  NC_000913/3289771‑3290065

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 14 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 32 ≤` `ATCG/ATCG` `< 36 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.