Predicted mutation
evidence seq id position mutation freq annotation gene description
JC JC NC_000913 2,868,098 IS5 (+) +4 bp 94.4% coding (653‑656/1140 nt) nlpD ← activator of AmiC murein hydrolase activity, lipoprotein

New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 1427599 =NA (NA)72 (0.870) 55/260 NT 94.6% noncoding (1196/1196 nt) IS5 repeat region
?NC_000913 2868098 = 4 (0.050)coding (656/1140 nt) nlpD activator of AmiC murein hydrolase activity, lipoprotein
* ? NC_000913 = 1428794NA (NA)62 (0.750) 54/258 NT 93.8% noncoding (1/1196 nt) IS5 repeat region
?NC_000913 = 2868101 4 (0.050)coding (653/1140 nt) nlpD activator of AmiC murein hydrolase activity, lipoprotein

Only 100 of 153 total aligned reads displayed.

TTGCCCTCAGTCGGCCAGCGCCAGGTGGAGATAGGCGTACTGGTTGATGTACTGCTGACAGTCGGCTCGGTTGTGCTTGCTGTTGGTACCGTTACAGGCGCTGTGACCGTGGTCGCAGTTGGCTTGTTGTTCGGCAACATTTTGTTAGCACTCTGTTCACCCGAAGACTCAGAATACGTAATTGTCGGTTGCGACGCAACAGCAACGGTGGAATTTTGTGCAGGCTTGATCACAACTCCTTGCTCTGCTGCGTCGGCCTGGGTAATGGCATTTCCGCCAGTGATTGGCGTACC  >  NC_000913/2867954‑2868246
                                                                                                                                                   |                                                                                                                                                 
ttGCCCTCAGTCGGCCAGCGCCAGGTGGAGATAGGCGTACTGGTTGATGTACTGCTGACAGTCGGCTCGGTTGTGCTTGCTGTTGGTACCGTTACAGGCGCTGTGACCGTGGTCGCAGTTGGCTTGTTGTTCGGCAACATTTTGTTAG                                                                                                                                                   <  4:31870‑M2/148‑1 (MQ=255)
ttGCCCTCAGTCGGCCAGCGCCAGGTGGAGATAGGCGTACTGGTTGATGTACTGCTGACAGTCGGCTCGGTTGTGCTTGCTGTTGGTACCGTTACAGGCGCTGTGACCGTGGTCGCAGTTGGCTTGTTGTTCGGCAACATTTTGTTAG                                                                                                                                                   <  2:246499‑M2/148‑1 (MQ=255)
ttGCCCTCAGTCGGCCAGCGCCAGGTGGAGATAGGCGTACTGGTTGATGTACTGCTGACAGTCGGCGCGGTTGTGCTTGCTGTTGGTACCGTTACAGGCGCTGTGACCGTGGTCGCAGGTGGCTTGTTGTTCGGCACCATTTTGTTAG                                                                                                                                                   <  3:22614‑M2/148‑1 (MQ=255)
 cggaaataacgccagaaattgtggaaaaaatagcctaaataggctgattcgatgtgtttgcgggaaaaaaatcggcccagatccgcgaaattttaatcagcgagtcagcttgggaagaaatgacctgcttattcgcaccttccTTAGc                                                                                                                                                  <  3:80779‑M2/5‑1 (MQ=255)
      tCAGTCGGCCAGCGCCAGGTGGAGATAGGCGTACTGGTCGAAGTACTGCTGACAGTCGGCTCGGTTGTGCTTGCTGTTGGTACCGTTACAGGCGCTGTGACCGTGGTCGCAGTTGGCTTGTTGTTCGGCAACATTTTGTTAGggaatg                                                                                                                                             <  7:165536‑M2/148‑7 (MQ=255)
       taacgccagaaatggtggaaaaaatagcctaaataggctgattcgatgtgtttgcgggaaaaaaatcggcccagatccgcgaaattttaatcagcgagtcagcttgggaagaaatgacctgcttattcgcaccttccTTAGCACTCTg                                                                                                                                            <  3:145737‑M2/11‑1 (MQ=255)
        aacgccagaaatggtggaaaaaatagcctaaataggctgattcgatgtgtttgagggaaaaaaatcggcccagatccgcgaaattttaatcagcgagtcagcttgggaagaaatgacctgcttattcgcaccttccTTAGCACTCTGt                                                                                                                                           >  3:130573‑M2/137‑148 (MQ=255)
        aGTCGGCCAGCGCCAGGTGGAGATAGGCGTACTGGTTGATGTACTGCTGACAGTCGGCTCGGTTGTGCTTGCTGTTGGTACCGTTACAGGCGCTGTGACCGTGGTCGCAGTTGGCTTGTTGTTCGGCAACATTTTGTTAGggaagg                                                                                                                                             >  1:246499‑M2/1‑140 (MQ=255)
         acgccagaaatggtggaaaaaatagcctaaataggctgattcgatgtgtttgcgggaaaaaaatcggcccagatccgcgaaattttaatcagcgagtcagcttgggaagaaatgacctgcttattcgcaccttccTTAGCACTCTGt                                                                                                                                           <  1:304711‑M2/12‑1 (MQ=255)
            ccagaaatggtggaaaaaatagcctaaataggctgattcgatgtgtttgcgggaaaaaaatcggcccagatccgcgaaattttaatcagcgagtcagcttgggaagaaatgacctgcttattcgcaccttccTTAGCACTCTGTTCAc                                                                                                                                       >  8:290303‑M2/133‑148 (MQ=255)
               cAGCGCCAGGTGGAGATAGGCGTACTGGTTGATGTACTGCTGACAGTCGGCTCGGTTGTGCTTGCTGTTGGTACCGTTACAGGCGCTGTGACCGTGGTCGCAGTTGGCTTGTTGTTCGGCAACATTTTGTTAGggaaggtgcgaacaa                                                                                                                                    >  8:55648‑M2/1‑133 (MQ=255)
                aaatggtggaaaaaatagcctaaataggctgattcgatgtgtttgcgggaaaaaaatcggcccagatccgcgaaattttaatcagcgagtcagcttgggaagaaatgacctgcttattcgcaccttccTTAGCACTCTGTTCACCCg                                                                                                                                    >  4:348549‑M2/129‑147 (MQ=255)
                aGCGCCAGCTTGAGATAGGCCTACTGGTTGATGTACTGCTGACAGTCGGCTCGGTTGTGCTTGCTGTAGGTACCGATACAGCCGCTGTAACCGTGGTCGCAGTAGGCTTGTTGTTCTGCAACATTTTGATAGggaacgtgcgaacaag                                                                                                                                   <  2:134984‑M2/148‑17 (MQ=255)
                 attggtggaaaaaatagcctaaataggctgattcgatgtgtttgcggtaaaaaaatcggcccagatccgcgaaattttaatcagcgagtcagcttgggaagaaatgacctgcttattcgcaccttccTTAGCACTCTGTTCACCCGa                                                                                                                                   <  2:9809‑M2/20‑1 (MQ=255)
                 aatggtggaaaaaatagcctaaataggctgattcgatgtgtttgcgggaaaaaaatcggcccagatccgcgaaattttaatcagcgagtcagcttgggaagaaatgacctgcttattcgcaccttccTTAGCACTCTGTTCACCCGa                                                                                                                                   <  7:199277‑M2/20‑1 (MQ=255)
                 aatggtggaaaaaatagcctaaataggctgattcgatgtgtttgcgggaaaaaaatcggcccagatccgcgaaattttaatcagcgagtcagcttgggaagaaatgacctgcttattcgcaccttccTTAGAACTCTGTTCACCCg                                                                                                                                    >  8:379964‑M2/128‑146 (MQ=255)
                  caccagGTGGAGATAGGCGTACTGGTTGATGTACTGCTGACAGTCGGCTCGGTTGTGCTTGCTGTTGGTACCGTTACAGGCGCTGTGACCGTGGTCGCAGTTGGCTTGTTGTTCGGCAACATTTTGTTAGggaaggtgcgaacaagtt                                                                                                                                 >  3:180356‑M2/3‑130 (MQ=255)
                    ccAGGTGGAGATATGCGTACTGGTTGATGTACTGCTGACAGTCGGCTCGGTTGTGCTTGCTGTTGGTCACGTTACAGGCGCTTGGACCGTGGTCGCAGTTGGCTTGTTGTTCGGCAACATTTTGTTAGggaaggtgcgaacaagttcc                                                                                                                               >  6:258998‑M2/1‑128 (MQ=255)
                      tggaaaaaatagcctaaataggctgattcgatgtgtttgcgggaaaaaaatcggcccagatccgcgaaattttaatcagcgagtcagcttgggaagaaatgacctgcttattcgcaccttccTTAGCACTCTGTTCACCCGAAGACTc                                                                                                                             <  3:360879‑M2/26‑1 (MQ=255)
                         aaaaaatagcctaaataggctgattcgatgtgtttgcgggaaaaaaatcggcccagatccgcgaaattttaatcagcgagtcagcttgggaagaaatgacctgcttattcgcaccttccTTAGCACTCTGTTCACCCGAAGACTCAGa                                                                                                                          <  7:360365‑M2/29‑1 (MQ=255)
                             gaTAGGCGTACTGGTTGATGTACTGCTGACAGTCGGCTCGGTTGTGCTTGCTGTTGGTACCGTTACAGGCGCTGTGACCGTGGTCGCAGTTGGCTTGTTGTTCGGCAACATTTTGTTAGggaaggtgcgaacaagttcctgatatgag                                                                                                                      >  2:310869‑M2/1‑119 (MQ=255)
                                     aaataggctgattcgatgtgtttgcgggaaaaaaatcggcccagatccgcgaaattttaatcagcgagtcagcttgggaagaaatgacctgcttattcgcaccttccTTAGCACTCTGTTCACCCGAAGACTCAGAATACGTAATTGt                                                                                                              >  8:215714‑M2/108‑148 (MQ=255)
                                     aaataggctgattcgatgtgtttgcgggaaaaaaaacggcccagatccgcgaaattttaatcagcgagtcagcttgggaagaaatgacctgcttattagccccttccTTAGCACTCTGTTCACCCGAATACTCAGAATACGTTATTGt                                                                                                              >  4:28729‑M2/108‑148 (MQ=255)
                                      aataggctgattcgatgtgtttgcgggaaaaaaatcggcccagatccgcgaatttttaatcagcgagtcagcttgggaagaaatgacctgcttattcgcaccttccTTAGCACGCTGTTCACCCGAAGACTCAGAATACGTAATTGTc                                                                                                             >  6:16808‑M2/107‑148 (MQ=255)
                                      aCTGGTTGATGTACTGCTGACAGTCGGCTCGGTTGTGCTTGCTGTTGGTACCGTTACAGGCGCTGTGACCGTGGTCGCAGTTGGCTTGTTGTTCGGCAACATTTTGTTAG                                                                                                                                                   >  5:55055‑M2/1‑110 (MQ=255)
                                         ggTTGATGTACTGCTGACAGTCGGCTCGGTTGTGCTTGCTGTTGGTACCGTTACAGGCGCTGTGACCGTGGTCGCAGTTGGCTTGTTGTTCGGCAACATTTTGTTAGggaaggtgcgaacaagttcctgatatgagatcatcatatt                                                                                                           <  4:26640‑M2/147‑41 (MQ=255)
                                         aggctgattcgatgtgtttgcgggaaaaaaatcggcccagatccgcgaaattttaatcagcgagtcagcttgggaagaaatgacctgcttattcgcaccttccTTAGCACTCTGTTCACCCGAAGACTCAGAATACGTAATTGTCGGt                                                                                                          >  2:222788‑M2/104‑148 (MQ=255)
                                           ttGATGTACTGCTGACAGTCGGCTCGGTTGTGCTTGCTGTTGGTACCGTTACAGGCGCTGTGACCGTGGTCGCAGTTGGCTTGTTGTTCGGCAACATTTTGTTAGggaa                                                                                                                                               >  6:250396‑M2/1‑105 (MQ=255)
                                           gctgattcgatgtgtttgcgggaaaaaaatcggcccagatccgcgaaattttaatcagcgagtcagcttgggaagaaatgacctgcttattcgcaccttccTTATCACTCTGTTCACCCGAAGACTCAGAATACGTAATTGTCGGTTg                                                                                                        <  3:124253‑M2/47‑1 (MQ=255)
                                               attcgatgtgtttgcgggaaaaaaatcggcccagatccgcgaaattttaatcagcgagtcagcttgggaagaaatgacctggttattcgcaccttccTTAGCACTCTGTTCACCCGAAGACTCAGAATACGTAATTGTCGGTTGCGAc                                                                                                    >  6:227542‑M2/98‑148 (MQ=255)
                                               attcgatgtgtttgagggaaaaaaatcggcccagatccgcgaaattttaatcagcgagtcagcttgggaagaaatgacctgcttattcgcaccttccTTAGCACTCTGTTCACCCGAAGACTCAGAATACGTAATTGTCGGTTGCg                                                                                                      <  4:130573‑M2/49‑1 (MQ=255)
                                                     tgtgtttgcgggaaaaaaatcggcccagatccgcgaaattttaatcagcgagtcagcttgggaagaaatgacctgcttattcgcaccttccTTAGCACTCTGTTCACCCGAAGACTCAGAATACGTAATTGTCGGTTGCGACGCaa                                                                                                >  4:177338‑M2/92‑146 (MQ=255)
                                                      gtgtttgcgggaaaaaaatcggcccagatccgcgaaatttttatcagcgagtcagcttgggaagaaatgacctgcttattcgcaccttccTTAGCACTCTGTTCCCCCGAAGACTCAGAATTCGTAATTGTCGGTTGCGACGCAAAAg                                                                                             >  2:346925‑M2/91‑148 (MQ=255)
                                                        gtttgcgggaaaaaaatcggcccagatccgcgaaattttaatcagcgagtcagcttgggaagaaatgacctgcttattcgcaccttccTTAGCACTCTGTTCACCCGAAGACTCAGAATACGTAATTGTCGGTTGCGACGCAACAGc                                                                                            >  7:42900‑M2/89‑147 (MQ=255)
                                                         aCAGTCGGCTCGGTTGTGCTTGCTGTTGGTACCGTTACAGGCGCTGTGACCGTGGTCGCAGTTGGCTTGTTGTTCGGCAACATCTTGTTAGggaaggtgcgaacaagttcctgatatgagatcatcatattcatccggagcgcatcc                                                                                           <  5:354638‑M2/147‑57 (MQ=255)
                                                            gcgggaaaaaaatcggcccagatccgcgaaattttaatcagcgagtcagcttgggaagaaatgacctgcttattcgcaccttccTTAGCACTCTGTTCACCCGAAGACTCAGAATACGTAATTGTCGGTTGCGACGCAACAGCAACg                                                                                        <  4:24040‑M2/63‑1 (MQ=255)
                                                                  aaaaaatcggcccagatccgcgaaattttaatcagcgagtcagcttgggaagaaatgacctgcttattcgcaccttccTTAGCACTCTGTTCACCCGAAGACTCAGa                                                                                                                          >  4:262104‑M2/79‑107 (MQ=255)
                                                                   cGGTTGTGCTTGCTGTTGGTACCGTTACAGGCGCTGTGACCGTGGTCGCAGTTGGCTTGTTGTTCGGCAACATTTTGTTAGggaaggtgcgaacaagttcctgatatgagatcatcatattcatccggagcgcatcccagagggacat                                                                                <  2:201907‑M2/148‑68 (MQ=255)
                                                                   aaaaatcggcccagatccgcgaaattttaatcagcgagtcagcttgggaagaaatgacctgcttattcgcaccttccTTAGCACTCTGTTCACCCGAAGACTCAGAATACGTAATTGTCGGTTGCGACGCAACAGCAACGGTGGAAtt                                                                                >  1:34216‑M2/78‑148 (MQ=255)
                                                                   aaaaatcggcccagatccgcgaaattttaatcagcgagtcagcttgggaagaaatgacctgcttattcgcaccttccTTAGCACTCTGTTCACCCGAAGACTCAGAATACGTAATTGTCGGTTGCGACGCAACAGCAACGGTGGAAtt                                                                                >  7:223039‑M2/78‑148 (MQ=255)
                                                                    ggTTGTGCTTGCTGTTGGTACCGTTACAGGCGCTGTGACCGTGGTCGCAGTTGGCTTGTTGTTCGGCAACATTTTGTTAGggaaggtgcgaacaagttcctgatatgagatcatcatattcatccggagcgcatcccagagggacatc                                                                               >  3:179466‑M2/1‑80 (MQ=255)
                                                                        gtgCTTGCTGTTGGTACCGTTACAGGCGCTGTGACCGTGGTCGCAGTTGGCTTGTTGTTCGGCAACATTTTGTTAGggaaggtgcgaacaagttcctgatatgagaacatcatattcatccggagcgcatcccagagggacatcatg                                                                            >  8:121418‑M2/1‑76 (MQ=255)
                                                                        gtgCTTGCTGTTGGTACCGTTACAGGCGCTGTGACCGTGGTCGCAGTTGGCTTGTTGTTCGGCAACATCTTGTTAGggaaggtgcgaacaagttcctgatatgagatcatcatattcatccggagcgcatcccagagggacatcatg                                                                            >  6:354638‑M2/1‑76 (MQ=255)
                                                                         tgcttgctGTTGGTACCGTTACAGGCGCTGTGACCGTGGTCGCAGTTGGCTTGTTGTTCGGCAACATTTTGTTAGggaaggtgcgaacaagttcctgatatgagatcatcatattcatccggagcgc                                                                                               <  6:192073‑M2/127‑53 (MQ=255)
                                                                         tgcttgctGTTGGTACCGTTACAGGCGCTGTGACCGTGGTCGCAGTTGGCTTGTTGTTCGGCAACATTTTGTTAGggaaggtgcgaacaagttcctgatatgagatcatcatattcatccggagcgc                                                                                               >  5:192073‑M2/1‑75 (MQ=255)
                                                                           cttgctGTTGGTACCGTTACAGGCGCTGTGACCGTGGTCGCAGTTGGCTTGTTGTTCGGCAACATTTTGTTAGggaaggtgcgaacaagttcctgatatgagatcatcatattcatccggagcgcatcccagagggacatcatgagc                                                                         <  1:189469‑M2/147‑75 (MQ=255)
                                                                            cccagatccgcgaaattttaatcagcgagtaagcttggtaagaaatgacctgcttattcgcaccttccTTAGCACTCTGTTCACCCGAAGACTCAGAATACGTAATTGTCGGTTGCGACGCAACAGCAACGGTGGAATTTTGTGc                                                                          <  5:259064‑M2/77‑1 (MQ=255)
                                                                             tgctGTTGGTACCGTTACAGGCGCTGTGACCGTGGTCGCAGTTGGCTTGTTGTTCGGCAACATTTTGTTAGggaaggtgcgaacaagttcctgatatgagatcatcatattcatccggagcgcatcccagagggacatcatgagccat                                                                      <  7:372905‑M2/148‑78 (MQ=255)
                                                                             ccagatccgcgaaattttaatcagcgagtcagcttgggaagaaatgacctgcttattcgcaccttccTTAGCACTCTGTTCACCCGAAGACTCAGAATACGTAATTGTCGGTTGCGACGCAACAGCAACGGTGGAATTTTGTGCAGGc                                                                      >  3:204528‑M2/68‑148 (MQ=255)
                                                                              cagatccgcgaaattttaatcagcgagtcagcttgggaagaaatgacctgcttattcgcaccttccTTAGCACTCTGTTCACCCGAAGACTCAGAATACGTAATTGTCGGTTGCGACGCAACAGCAACGGTGGAATTTTGTGCAGGCt                                                                     <  7:207187‑M2/82‑1 (MQ=255)
                                                                              cagatccgcgaaattttaatcagcgagtcagcttgggaagaaatgacctgcttattcgcaccttccTTAGCACTCTGTTCACCCGAAGACTCAGAATACGTAATTGTCGGTTGCGACGCAACAGCAACGGTGGAATTTTGTGCAGGCt                                                                     >  8:207187‑M2/67‑148 (MQ=255)
                                                                               ctGTTGGTACCGTTACAGGCGCTGTGACCGTGGTCGCAGTTGGCTTGTTGTTCGGCAACATTTTGTTAGggaaggtgcgaacaagttcctgatatgagatcatcatattcatccggagcgcatcccagagggacatcatgagccatca                                                                    >  3:26640‑M2/1‑69 (MQ=255)
                                                                                 gTTGGTACCGTTACAGGCGCTGTGACCGTGGTCGCAGTTGGCTTGTTGTTCGGCAACATTTTGTTAGggaaggtgcgaacaagttcctgatatgagatcatcatattcatccggagcgcatcccagagggacat                                                                                >  5:317247‑M2/1‑67 (MQ=255)
                                                                                 gTTGGTACCGTTACAGGCGCTGTGACCGTGGTCGCAGTTGGCTTGTTGTTCGGCAACATTTTGTTAGggaaggtgcgaacaagttcctgatatgagatcatcatattcatccggagcgcatcccagagggacat                                                                                <  6:317247‑M2/134‑68 (MQ=255)
                                                                                 gTTGGTACCGTTACAGGCGCTGTGACCGAGGTCGCAGTTGGCTTGTTGTTCGGCAACATTTTGTTAGggaaggtgcgaacaagttcctgatatgagatcataatattcatccggagcgcatcccagagggacatcatgagccatcaac                                                                  <  8:7181‑M2/148‑82 (MQ=255)
                                                                                 atccgcgaaattttaatcagcgagtcagcttgggaagaaatgacctgcttattcgcaccttccTTAGCACTCTGTTCACCCGAAGACTCAGAATACGTAATTGTCGGTTGCGACGCAACAGCAACGGTGGAATTTTGTGCAGGCTTGa                                                                  <  1:114132‑M2/85‑1 (MQ=255)
                                                                                    ggTACCGTTACAGGCGCTGTGACCGTGGTCGCAGTTGGCTTGTTGTTCGGCAACATTTTGTTAGggaaggtgcgaacaagttcctgatatgagatcatcatattcatccggagcgcatcccagagggacatcatgagccatcaactc                                                                >  3:266418‑M2/1‑64 (MQ=255)
                                                                                    ggTACCGTTACAGGCGCTGTGACCGTGGTCGCAGTTGGCTTGTTGTTCGGCAACATTTTGTTAGggaaggtgcgaacaagttcctgatatgagatcatcatattcatccggagcgcatcccagagggacatcatgagccatcaactc                                                                >  7:7181‑M2/1‑64 (MQ=255)
                                                                                     gTACCGTTACAGGCGCTGTGACCGTGGTTGCAGTTGGCTTGTTGTTCGGCAACATTTTGTTAGggaaggtgcgaacaagttcctgatatgagatcatcatattcatccggagcgcatcccagagggacatcatgagccatcaactcac                                                              >  4:358344‑M2/1‑63 (MQ=255)
                                                                                      cgaaattttaatcagcgagtcagcttgggaagaaatgacctgcttattcgcaccttccTTAGCACTCTGTTCACCCGAAGACTCAGAATACGTAATTGTCGGTTGCGACGCAACAGCAACGGTGGAATTTTGTGCAGGCTTGTTcac                                                              >  8:90156‑M2/59‑147 (MQ=255)
                                                                                            tttaatcagcgagtcagcttgggaagaaatgacctgcttattcgcaccttccTTAGCACTCTGTTCACCCGAAGACTCAGAATACGTAATTGTCGGTTGCGACGCAACAGCAACGGTGGAATTTTGTGCAGGCTTGATCACAACTCCt                                                       >  8:154505‑M2/53‑148 (MQ=255)
                                                                                            tACAGGCGCTGTGACCGTGGTCGCAGTTGGCTTGTTGTTCGGCAACATTTTGTTAGCACTCTGTTCACCCGAAGACTCAGAATACGTAATTGTCGGTTGCGACGCAACAGCAACGGTGGAATTTTGTGCAGGCTTGATCACAACTCCt                                                       >  8:26923/1‑148 (MQ=255)
                                                                                             aCAGGCGCTGTGACCGTGGTCGCAGTTGGCTTGTTGTTCGGCAACATTTTGTTAGCACTCTGTTCACCCGAAGACTCAGAATACGTAATTGTCGGTTGCGACGCAACAGCAACGGTGGAATTTTGTGCAGGCTTGATCACAACTCCt                                                       <  1:246448/147‑1 (MQ=255)
                                                                                                ggCGCTGTGACCGTGGTCGCAGTTGGCTTGTTGTTCGGCAACATTTTGTTAGggaaggtgcgaacaagttactgatatgagatcatcatattcatccggagcgcataccagagggacataatgagccatcaactcacattcgccgata                                                   <  4:108044‑M2/148‑97 (MQ=255)
                                                                                                atcagcgagtcagcttgggaagaaatgacctgcttattcgcaccttccTTAGCACTCTGTTCACCCGAAGACTCAGAATACGTAATTGTCGGTTGCGACGCAACAGCAACGGTGGAATTTTGTGCAGGCTTGATCACAACTCCTTGc                                                    <  7:215714‑M2/99‑1 (MQ=255)
                                                                                                  cagcgagtcagcttgggaagaaatgacctgcttaatcgcaccgtccTTAGCACTCTGTTCACCCGAAGACTCAGAATACGTAATTGTCGGTTGCGCCGCAACAGCAACGGTGGAATTTTCTGCAGGCTTGCTCACAACTCCTTGctct                                                 >  2:374128‑M2/47‑148 (MQ=255)
                                                                                                  cagcgagtaagcttgggaagaaatgacctgcttattcgcacattccTTAGCACTCTGTTCACCCGAAGACTCAGAATACGTAATAGTCGGTTGCGACGCAACATCAACGGTGGAATTTTGTGCAGGCTTGATCAGAACTCCTTGctct                                                 >  4:193801‑M2/47‑148 (MQ=255)
                                                                                                       tgACCGTGGTCGCAGTTGGCTTGTTGTTCGGCAACATTTTGTTAGggaaggtgcgaacaagttcctgatatgagatcatcatattcatccggagcgcatcccagagggacatcatgagccatcaactcaccttcgccgatagtgaat                                             >  1:67027‑M2/1‑45 (MQ=255)
                                                                                                       agtcagcttgggaagaaatgacctgcttattcgcaccttccTTAGCACTCTGTTCACCCGAAGACTCAGAATACGTAATTGTCGGTTGCGACGCAACAGCAACGGTGGAATTTTGTGCAGGCTTGATCACAACTCCTTGCTCtgctgc                                            >  5:104065‑M2/42‑148 (MQ=255)
                                                                                                          ccGTGGTCGCAGGTGGCTTGTGGTGCCGCAACATTTTGTTAGggaaggtgcgaacaagttcctgatatgagatcatcatattcatccggagcgcagcccagagggacatcatgagcgatcaactcaccttcgccgatagtgaattcag                                         >  4:22614‑M2/1‑42 (MQ=255)
                                                                                                           cGTGGTCGCAGTTGGCTTGTTGTTCGGCAACATTTTGTTAGggaaggtgcggacaagttcctgatatgagatcatcatattcatccggagcgcatcccagagggacatcatgagccatcaactcaccttcgccgatagtgaattcagc                                        >  6:350583‑M2/1‑41 (MQ=255)
                                                                                                            gcttgggaagaaatgacctgcttattcgcaccttccTTAGCACTCTGTTCACCCGAAGACTCAGAATACGTAATTGTCGGTTGCGACGCAACAGCAACGGTgg                                                                                    <  2:15837‑M2/67‑1 (MQ=255)
                                                                                                            gcttgggaagaaatgacctgcttattcgcaccttccTTAGCACTCTGTTCACCCGAAGACTCAGAATACGTAATTGTCGGTTGCGACGCAACAGCAACGGTgg                                                                                    >  1:15837‑M2/37‑103 (MQ=255)
                                                                                                              ttgggaagaaatgacctgcttattcgcaccttccTTAGCACTCTGTTCACCCGAAGACTCAGAATACGTa                                                                                                                   >  3:253882‑M2/35‑70 (MQ=255)
                                                                                                                  gaagaaatgacctgcttattcgcaccttccTTAGCACTCTGTTCACCCGAAGACTCAGAATACGTAATTGTCGGTTGCGACGCAACAGCAACGGTGGAATTTTGTGCAGGCTTGATCACAACTCCTTGCTCTGCTGCGTCGGCCTggg                                 >  8:381153‑M2/31‑148 (MQ=255)
                                                                                                                  gaagaaatgacctgcttattcgcaccttccTTAGCACTCTGTTCACCCGAAGACTCAGAATACGTAATTGTCGGTTGCGACGCAACAGCAACGGTGGAATATTGTGCAGGCTTGATCACAACTCCTTGCTCTGCTGCGTCGGCCTggg                                 <  6:100266‑M2/118‑1 (MQ=255)
                                                                                                                     gTTGGCTTGTTGTTCGGCAACATTTTGTTAGggaaggtgcgaacaagttcctgatatgagatcatcatattcatccggagcgcatcccagagggacatcatgagccatcaactcaccttcgccgatagtgaattcagcactaagcgcc                              <  8:164326‑M2/148‑118 (MQ=255)
                                                                                                                       tGGCTTGTTGTTCGGCAACATTTTGTTAGggaaggtgcgaacaagttcctgatatgagatcatcatattcatccggagcgcatcccagagggacatcatgagccatcaactcaccttcgccgatagtgaattcagcactaagcgccgt                            <  4:280618‑M2/148‑120 (MQ=255)
                                                                                                                       tGGCTTGTTGTTCGGCAACATTTTGTTAGggaaggtgcgaacaagttcctgatatgagatcatcatattcatccggagcgcatcccagagggacatcatgagccatcaactcaccttcgccgatagtgaattcagcactaagcgccgt                            <  8:20933‑M2/148‑120 (MQ=255)
                                                                                                                       tGGCTTGTTGTTCGGCAACATTTTGTTAGggaaggtgcgaacaagttcctgatatgagatcatcatattcatccggagcgcatcccagagggacatcatgagccatca                                                                    >  2:89942‑M2/1‑29 (MQ=255)
                                                                                                                       aatgacctgcttattcgcaccttccTTAGCACTCTGTTCACCCGAAGACTCAGAATACGTAATTGTCGGTTGCGACGCAACAGCAACGGTGGAATTTTGTGCAGGCTTGATCACAACTCCTTGCTCTGCTGCGTCGGCCTGGGTAAt                             <  2:37513‑M2/122‑1 (MQ=255)
                                                                                                                          cTTGTTGTTCGGCAACATTTTGTTAGggaaggtgcgaacaagttcctgatatgagatcatcatattcatccggagcgcatcccatcgggacatcatgagccatcaactcaccttcgccgatagtgaattcagcactaagcgccgtcag                         >  2:74091‑M2/1‑26 (MQ=255)
                                                                                                                           ttgttgTTCGGCAACATTTTGTTAGggaaggtgcgaacaagttcctgatatgagatcatcatattcatccggagcgcatcccag                                                                                        >  1:128602‑M2/1‑25 (MQ=255)
                                                                                                                              ttgttCGGCAACATTTTGTTAGggaaggtgcgaacaagttcctgatatgagatcatcatattcatccggagcgcatcccagagggacatcatgagccatcaactcaccttcgccgatagtgaattcagcactaagcgccgtcagaccc                     <  4:93616‑M2/148‑127 (MQ=255)
                                                                                                                              tgcttattcgcaccttccTTAGCACTCTGTTCACCCGAAGACTCAGAATACGTAATTGTCGGTTGCGACGCAACAGCAACGGTGGAATTTTGTGCAGGCTTGATCACAACTCCTTGCTCTGCTGCGTCGGCCTGGGTAATGGCATTTc                     >  5:358566‑M2/19‑148 (MQ=255)
                                                                                                                                  tattcgcaccttccTTAGCACTCTGTTCACCCGAAGACTCAGAATACGTAATTGTCGGTTGCGACGCAACAGCAACGGTGGAATTTTGTGCAGGCTTGATCACAACTCCTTGCTCTGCTGCGTCGGCCTGGGTa                               >  2:65576‑M2/15‑134 (MQ=255)
                                                                                                                                  tattcgcaccttccTTAGCACTCTGTTCACCCGAAGACTCAGAATACGTAATTGTCGGTTGCGACGCAACAGCAACGGTGGAATTTTGTGCAGGCTTGATCACAACTCCTTGCTCTGCTGCGTCGGCCTGGGTa                               <  1:65576‑M2/120‑1 (MQ=255)
                                                                                                                                   cGGCAACATTTTGTTAGggaaggtgcgaacaagttcctgatatgagatcatcatattcatccggagcgcatcccagagggacatcatgagccatcaactcaccttcgccgatagtgaattcagcactaagcgccgtcagacccgaaa                 >  5:265913‑M2/1‑17 (MQ=255)
                                                                                                                                   attcgcaccttccTTAGCACTCTGTTCACCCGAAGACTCAGAATACGTAATTGTCGGTTGCGACGCAACAGCAACGGTGGAATTTTGTGCAGGCTTGCTCACAACTCCTTGCTCTGCTGCGTCGGCCTGGGTAATGGCATTTCCGc                  >  5:284512‑M2/14‑146 (MQ=255)
                                                                                                                                    ttcgcaccttccTTAGCACTCTGTTCACCCGAAGACTCAGAATACGTAATTGTCGGTTGCGACGCAACAGCAACGGTGGAAttt                                                                               <  7:277998‑M2/72‑1 (MQ=255)
                                                                                                                                    ttcgcaccttccTTAGCACTCTGTTCACCCGAAGACTCAGAATACGTAATTGTCGGTTGCGACGCAACAGCAACGGTGGAATTTTGTGCAGGCTTGATCACAACTCCTTGCTCTGCTGCGTCGGCCTGGGTAATGGCATTTCCGCCAg               >  8:309180‑M2/13‑148 (MQ=255)
                                                                                                                                    ttcgcaccttccTTAGCACTCTGTTCACCCGAAGACTCAGAATACGTAATTGTCGGTTGCGACGCAACAGCAACGGTGGAATTTTGTGCAGGCTTGATCACAACTCCTTGCTCTGCTGCGTCGGCCTGGGTAATGGCATTTCCGCCAg               >  5:155484‑M2/13‑148 (MQ=255)
                                                                                                                                       gcaccttccTTAGCACTCTGTTCACCCGAAGACTCAGAATACGTAATTGTCGGTTGCGACGCAACAGCAACGGTGGAATTTTGTGCAGGCTTGATCACAACTCCTTGCTCTGCTGCGTCGGCCTGGGTAATGGCATTTCCGCCAGTGa            <  6:333454‑M2/139‑1 (MQ=255)
                                                                                                                                         cATTTTGTTAGggaaggtgcgaacaagttcctgatatgagatcatcatattcatccggagcgcatcccagagggacatcatgagccatcaactcaccttcgccgatagtgaattcagcactaagcgccgtcagacccgaaaagagatt          >  7:164326‑M2/1‑11 (MQ=255)
                                                                                                                                          aTTTTGTTAGCACTCTGTTCACCCGAAGACTCAGAATACGTAATTGTCGGTTGCGACGCAACAGCAACGGTGGAATTTTGTGCAGGCTTGATCACAACTCCTTGCTCTGCTGCGTCGGCCTGGGTAATGGCATTTCCGCCAGTGATTg         <  7:26923/148‑1 (MQ=255)
                                                                                                                                           ttttGTTAGggaaggtgcgaacaagttcctgatatgagatcatcatattcatccggagcgcatcccagagggacatcatgagccatcaactcaccttcgccgatagtgaattcagcactaagcgccgtcagacccgaaaagagatttt        >  3:31870‑M2/1‑9 (MQ=255)
                                                                                                                                            ttccTTAGCACTCTGTTCACCCGAAGACTCAGAATACGTAATTGTCGGTTGCGACGCAACAGCAACGGTGGAATTTTGTGCAGGCTTGATCACAACTCCTTGCTCTGCTGCGTCGGCCTGGGTAATGGCATTTCCGCCAGTGATTGGc       >  2:103918‑M2/5‑148 (MQ=255)
                                                                                                                                             tccTTAGCACTCTGTTCACCCGAAGACTCAGAATACGTAATTGTCGGTTGCGACGCAACAGCAACGGTGGAATTTTGTGCAGGCTTGATCACAACTCCTTGCTCTGCTGTGTCGGCCTGGGTAATGGCATTTCCGCCAGTGATTGGCg      >  3:149502‑M2/4‑148 (MQ=255)
                                                                                                                                                 tAGCACTCTGTTCACCCGAAGACTCAGAATACGTAATTGTCGGTTGCGACGCAACAGCAACGGTGGAATTTTGTGCAGGCTTGATCACAACTCCTTGCTCTGCTGCGTCGGCCTGGGTAATGGCATTTCCGCCAGTGATTGGCGTAcc  >  1:90310/1‑148 (MQ=255)
                                                                                                                                                 tAGCACTCTGTTCACCCGAAGACTCAGAATACGTAATTGTCGGTTGCGACGCAACAGCAACGGTGGAATTTTGTGCAGGCTTGATCACAACTCCTTGCTCTGCTGCGTCGGCCTGGGTAATGGCATTTCCGCCAGTGATTGGCGTAcc  >  4:119243/1‑148 (MQ=255)
                                                                                                                                                   |                                                                                                                                                 
TTGCCCTCAGTCGGCCAGCGCCAGGTGGAGATAGGCGTACTGGTTGATGTACTGCTGACAGTCGGCTCGGTTGTGCTTGCTGTTGGTACCGTTACAGGCGCTGTGACCGTGGTCGCAGTTGGCTTGTTGTTCGGCAACATTTTGTTAGCACTCTGTTCACCCGAAGACTCAGAATACGTAATTGTCGGTTGCGACGCAACAGCAACGGTGGAATTTTGTGCAGGCTTGATCACAACTCCTTGCTCTGCTGCGTCGGCCTGGGTAATGGCATTTCCGCCAGTGATTGGCGTACC  >  NC_000913/2867954‑2868246

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.