| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 3,781,103 | A→C | 12.5% | intergenic (+86/‑112) | lldD → / → trmL | L‑lactate dehydrogenase, FMN‑linked/tRNA Leu mC34,mU34 2'‑O‑methyltransferase, SAM‑dependent |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 3,781,103 | 0 | A | C | 12.5% | 270.7 / 4.1 | 121 | intergenic (+86/‑112) | lldD/trmL | L‑lactate dehydrogenase, FMN‑linked/tRNA Leu mC34,mU34 2'‑O‑methyltransferase, SAM‑dependent |
| Reads supporting (aligned to +/- strand): ref base A (51/51); new base C (7/10); total (60/61) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 6.04e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 123 total aligned reads displayed.
TAAAGAGTTGCCTGCGGCACTGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCGCCCCCTCACCCTAACCCTCTCCCTCAGGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCCGGGGTGAGGGGAAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATGCTAAACATCGTACTTTACGAACCAGAAATTCCG > NC_000913/3780966‑3781250 | tAAAGAGTCGCCTGCGGCACTGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCTATTGCGCCCCCTCACCATAACCCTCTCCCTCAGGGAGAGGGGACCGTTCGGCGCTGTATTTACTCCCTCACTCTGAAACGACACCGCACTCtt < 5:107467/148‑1 (MQ=255) aaaGAGTTGCCTGCGGCACTGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCGCCCCCTCCCCCTAACCCTCTACCTCAGGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCACTCttt > 1:211274/1‑148 (MQ=255) aaaGAGTTGCCTGCGGCACTGGCTCCCAAGGCGAAAGCGAATTCGGCATAGTCGTTTTCGCCCCCTAACCCTAAACCAATCCCTCAGGGCGAAGGGACCCGTCGGCGCAGTAAGGACACCCTCACTCTGTAACGAAACCCCACTAttt > 6:18952/1‑148 (MQ=255) gTTGCCTGCGGCACTGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCGCCCCCTCACCCTAACCCTCTCCCTCAGGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCACACttttttt > 2:319797/1‑147 (MQ=255) ttGCCTGCGGCACTGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCGCCCCCTCACCCTAACCCTCTCCCTCAGGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCACTCTTTTTTtct < 5:192476/148‑1 (MQ=255) tGCCTGCGGCACTGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCGCCCCCTCACCCTAACCCTCTCCCTCAGGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCCCGCTGAAACGCCCCCGCCCTCTTTTTTtctc > 4:139757/1‑148 (MQ=255) tGCCTGCGGCACTGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCGCCCCCGCACCCTAACCCTCTCCCTCAGGGAGAGGGGACCGTTCGGCGCTGTATGTACGCCCTCACTCTCCAACGACCCCCCCCTCGTTTTTtctc > 7:312355/1‑148 (MQ=255) gCCTGCGGCACTGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCGCCCCCTCACCCTAACCCTCTCCCTCAGGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCACTCTTTTTTtctc < 2:287677/147‑1 (MQ=255) ccTGCGGCACTGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCGCCCCCTCCCCCTAACCCTCTCCCTCAGGGAGAGGGGACCGTTCGGCGCTGGATGTACTCCCTCACGCTGAAACGACACCGCACTCtttttttatacc > 3:143771/1‑143 (MQ=255) ccTGCGGCACTGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCGCCCCCTCACCCTAACCCTCTCCCTCAGGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCACTCTTTTTTTCTccc < 6:354019/148‑1 (MQ=255) cGGCACTGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCGCCCCCTCACCCTAACCCTCTCCCTCAGGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGc > 5:373116/1‑148 (MQ=255) cGGCACTGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCGCCCCCTAACCCTAACCCACTCCCACAGGGAGAGGGGACCGTTCGGCGATGGATGTACACCCTCACTCTGAAACGACACCGCACTCGTTTTTTCTCCCTCGc > 4:126087/1‑148 (MQ=255) aCTGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCGCCCCCTCACCCTAACCCTCTCCCTCAGGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTAGCCCCt < 7:180252/148‑1 (MQ=255) tGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCGCCCCCGCACCCTAACCCTCTCCCGCAGGGAGAGGGGCCCGTTCGGGGCTGTATGTACTCCCTCACTCTGAAACGCCCCCGCCCTCGTTTTTTCTCCCTCGCCCCGcc > 7:367961/1‑148 (MQ=255) gCTCCCCAGGCGAAAGGGAATGCGGCATAGTCGTTTGCGCCCCCTCACCCTAACCCTCTCCCTCAGGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCgg < 5:282352/148‑1 (MQ=255) gCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCGCCCCCTCACCCTAACCCTCTCCCTCAGGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCgg < 8:329560/148‑1 (MQ=255) cTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCGCCCCCTCACCCTAACCCTCTCCCTCAGGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCCCTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCggg > 1:308287/1‑148 (MQ=255) cccATGGCGAAAGGGAATGCGGCATAGTCGTTTGCGCCCCCTCACCCTAACCCTCTCCCTCAGGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCggg > 4:205310/1‑146 (MQ=255) ccATGGCGAAAGGGAATGCGGCATAGTCGTTTGCGCCCCCTCACCCTAACCCTCTCCCTCAGGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGgag < 3:348792/148‑1 (MQ=255) ccATGGCGAAAGGGAATGCGGCATAGTCGTTTGCGCCCCCTCACCCTAACCCTCTCCCTCAGGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGgag < 1:302267/148‑1 (MQ=255) cATGGCGAAAGGGAATGCGGCATAGTCGTTTGCGCCCCCTCACCCTAACCCTCACCCTAAGGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGCCACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGga > 2:111812/1‑146 (MQ=255) ggCGAAAGGGAATGCGGCATAGTCGTTTGCGCCCCCTCACCCTAACCCTCTCCCTGAGGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAggg > 5:75866/1‑148 (MQ=255) gAAAGGGAATGCGGCATAGTCGTTTGCGCCCCCTCACCCTAACCCTCTCCCTCAGGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCCg < 4:345511/148‑1 (MQ=255) aaaGGGAATGCGGCATAGTCGTTTGCGCCCCCTCACCCTAACCCTCTCCCTCAGGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACGCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCCgg > 1:117682/1‑148 (MQ=255) aaGGGAATGCGGCATAGTCGTTTGCGCCCCCTCGCCCTAACCCTCTCCCTCAGGGAGAGTGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACCACACAGCACACATATTATCTCCCTCCCCCCTCCGCGGACAGGccccgc > 5:118236/1‑145 (MQ=255) ggAATGCGGCATAGTCGTTTGCCCCCCCTCACCCTAACCCTCTCCCTCAGGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCCGGGGTg < 7:63199/148‑1 (MQ=255) gCGGCATAGTCGTTTGCGCCCCCTAACCCTAACCCTCACCCTCAGGGAGAGGGGACCGTTAGGCGCTGTATGTACTCCCTCCCACTGAAACGCAACCGCCCTATTTTTTTCACCCTCGCCCCTCCGGGGAGAGGGCCGGGGTGAggg > 8:263898/1‑147 (MQ=255) cGGCAATGTAGTTTGCGCCCCCTCACCCTAACCCTCTCCCTCCGGGAGAGGGGAGCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCTGTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGATGGCCGGGGTGAGGGGa < 6:241557/148‑1 (MQ=255) aggCATAGTCTTTTGCTCCCCCTCACCCTAACCCTCTCCCTCAGTGATAGGGGACCTTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCACTCTTTTTATCTCCATCGCCCCTCCGGGGAGAGGGCAGGGGTGAGGGGa < 6:141444/147‑1 (MQ=255) gCATAGTCGTTTGCGCCCCCTCACCCTAACCCTCTCCCTCCGGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCCGGGGTGAGGGGaaa < 5:117234/148‑1 (MQ=255) gCATAGTCGTTTGCGCCCCCTCACCCTAACCCTCTCCCTCAGGGAGAGGGGACCGTTGGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCCGGGGTGAGGGGaaa < 5:219313/148‑1 (MQ=255) gCATAGTCGTTTGCGCCCCCTCACCCTAACCCTCTCCCTCAGGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGgag > 1:72205/1‑128 (MQ=255) gCATAGTCGTTTGCGCCCCCTCACCCTAACCCTCTCCCTCAGGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGgag < 2:72205/128‑1 (MQ=255) gCATAGTCGTTTGCGCCCCCTCACCCTAACCCTCTCCCTCAGGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCCGGGGTGAGGGGaaa < 2:325236/148‑1 (MQ=255) cATAGTCGTTTGCGCCCCCTCACCCTAACCCTCTCCCTCAGGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCCGGGGTGAGGGGaa > 8:317447/1‑146 (MQ=255) tAGTCGTTTGCGCCCCCTCACCCTAACCCTCTCCCTCAGGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCCGGGGTGAGGGGAAAAgg < 7:198945/148‑1 (MQ=255) aGTCGTTTGCGCCCCCTCACCCTAACCCTATCCCTCAGGGAGAGGGGACCGTTCGGCGCTGTATGTACTACCTCACTCTTAAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCCGGGGTGAGGGGTAAAGGc > 3:247002/1‑148 (MQ=255) aGTCGTTTGCGCCCCCGCACCCAAACCCACTCCCGCAGGGGGAGGGGGCCGTTCGGGGCGGTTTGTTCTACCACCCACTGAAACGCCCCCGCACTCTTTTTTTCTCCCACGCCCCACCGGGGCGAGGGCCGGGGGGGGGGGAAAATGc > 6:17912/1‑148 (MQ=255) gTCGTTTGCGCCCCCTCAACCTAACCCACTCCCACAGGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCAAACTCTGAAACGACAACGCACTCTTTTTTTATACCTCGCCCCTCCGGGGAGAGGGCCGGGGTGAGGGGAAAAGGcc > 8:231234/1‑148 (MQ=255) gTTTGCGCCCCCTCACCCTAACCCTCTCCCTCAGGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCCGGTGTGAGGGGAAAAGGCCGc < 5:313561/147‑1 (MQ=255) tttGCGCCCCCTCACCCAAACCCTCACCCTCAGGGAGAGGGGACCGATCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCACCGGGGAGAGGGCCGGGGTCAGGGGAAAAGGCCGCa > 4:331274/1‑147 (MQ=255) cTCACCCTAACCCTTTCCCTCAGGGAGTGGGGACCGTGGGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCCGGTGTGAGGGGAAAAGGCCGCACTGCTCACCaa < 3:325116/148‑1 (MQ=255) cTCACCCTAACCCTCTCCCTCAGGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCCGGGGTGAGGGGAAAAgg > 6:336042/1‑132 (MQ=255) cTCACCCTAACCCTCTCCCTCAGGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCCGGGGTGAGGGGAAAAgg < 5:336042/132‑1 (MQ=255) tCACCCTAACCCTCTCCCTCAGGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCCGGGGTGAGGGGAAAAGGCCGCACTGCTCACCAAt > 6:167049/1‑148 (MQ=255) cACCCTAACCCTCTCCCTCAGGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGCGGGCCGGGGTGCGGGGAAAAGGCCGCACTGCGAACCAAtt > 6:66798/1‑148 (MQ=255) acccacaCCCTCTCCGTCAGGGTGAGGGGACCGTGCGGCGCTGTATGTACTCCCCCACTCTCAAACCACCCCGCACTATTTTTTTCTCCCTCCCCCCTCGGGGGATTGGGCCGGGGTGAGGGGAAAAGGCCGCACTGCTCACCAAt < 6:37226/140‑1 (MQ=255) aCCCTAACCCTCTCCCTCTGGGTGTGGGGACCGTTCGGCGCTGTAGGTACTCCCTCACTCTCAAACGACCCCGCACTCTTTTTTTCCCCCTCGCCCCTCGGGGGTGCGGGCGGGGGTGAGGGGAAAAGGCCGCACTGCTCACCAAttt < 2:178140/148‑1 (MQ=255) cccTAACCCTCTCCCTCAGGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCCGGGGTGAGGGGAAAAGGCCGCACTGCTCACCAAtttt > 3:178439/1‑148 (MQ=255) ccTAACCCGCGCCCTCAGGGCGAGGGGACCGTGCGGCGCGGTTTGTACTCCCCCCCCGTGAAACCCCCCCGCACGCTTTTTTTCTCCCTCGCCCCGCCGGGGAGAGGGCCGGGGTGAGGGGAAAAGGCCGCACTGCTCACCAATTTTc < 2:270998/148‑1 (MQ=255) caaaccccTCGCCCCCAGGGCGCGGGGACCGTGCGGCGCTGTATGAACCCCCCCACTCTGAACCGACCCCGCACTCTTTTTTTCTCCCTCCCCCCGCCGGGGAGAGGGCGGGGGTGAGGGGAAAAGGCCGCACTGCTCACCAATTTTc < 5:17912/143‑1 (MQ=255) cTAACCCTCTCCCTCAGGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCCGGGGTGAGGGGAAAAGGCCGCACTGCTCACCAATTTTCt > 4:306172/1‑148 (MQ=255) aaCCCTCTCCCTCAGGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCCGTCTGAAACGACCCCGCACACTTTTTTTCTCCCTCGCCCCTCCGGGGAGGGGCCCGGGGTGAGGGGAAAAGGCCGCACTGGTCCCAAATTTTCTGc > 4:4562/1‑148 (MQ=255) cccTCTCCCTCAGGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGgag > 6:62401/1‑99 (MQ=255) cccTCTCCCTCAGGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGgag < 5:62401/99‑1 (MQ=255) ctctCCCTGAGGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCCGGGGTGAGGGGaaa < 1:154130/117‑1 (MQ=255) ctctCCCTGAGGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCCGGGGTGAGGGGaaa > 2:154130/1‑117 (MQ=255) ctctCCCTCAGGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCCGGGGTGAGGGGaaa < 6:55883/117‑1 (MQ=255) ctctCCCTCAGGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCCGGGGTGAGGGGaaa > 5:55883/1‑117 (MQ=255) ctctCCCTCAGGGAGAGGGGACCGGTCGGCGCTGTATGTTCGCCCTCACTCTGAAACGCCACCGGACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCCGGGGTGAGGGGAAAAGGCCGCACTGCTCACCAATTTTCTGCTATc > 4:70152/1‑148 (MQ=255) tctcCCTCAGGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGCCGCCGCCCTCTTTTTTTCTCCCTCGCCCCTCCGGGGCGAGGGCGGGGGGGCGGGGAAAAGGCCGCACTGCGCACCAATTTTCTGCTATcc > 2:193528/1‑148 (MQ=255) tctcCCTCAGGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCCGGGGTGAGGGGAAAAGGCCGCACTGCTCACCAATTTTCTGCTATcc > 1:261041/1‑148 (MQ=255) ccTCAGGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCCGGGGTGAGGGGAAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTg < 2:261041/146‑1 (MQ=255) cTCAGGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACCCCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCCGGGGTGAGGGGAAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGccc > 4:128460/1‑148 (MQ=255) tCAGGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCCGGGGTGAGGGGAAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGcccc > 8:224243/1‑148 (MQ=255) cAGGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCCGGGGTGAGGGGAAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGccccc > 1:63939/1‑148 (MQ=255) aGGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCCGGGGTGAGGGGAAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGcccc < 6:155366/146‑1 (MQ=255) gggAGAGGCGACGGTTCGCCTCAGTATCTCCTCCCTCACGCTGACACTCCCCCGCCCTATTTTTTTCTCCCTCGCCCCTCCGGGGCGCGGGCCGTGGTGAGGGGAAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGc < 5:305901/148‑1 (MQ=255) gagaGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCCGGGGTGAGGGGAAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCAc > 4:214634/1‑148 (MQ=255) gtggggACCGTTGGGCGCTGTATGTACTCCCCCACTCGGAACCGCCCCCGCACTTTTTTTTTCTCCCTCGCCCCTCGGGGGAGCGGGCGGGGGGGCGGGGACAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTa < 1:362123/146‑1 (MQ=255) gatgggACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCTCCTCCGGGGAGAGGGCCGGGGTGAGGGGAAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTa < 5:18952/145‑1 (MQ=255) gagGGGACCGTTCGGCGCTGTATGTACGCCCTCACTCTGAAACGACCCCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCCGGGGTGAGGGGAAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTa < 2:308287/148‑1 (MQ=255) tggggACCGTTGGGCGCTGTATTTACTCCCTCACTGTGAAAGGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCGGGGGAGAGGGCCGGGGTGAGGGGAAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTa < 4:168142/146‑1 (MQ=255) agGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGTGAGGGCCGGGGTGAGGGGAAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTaa < 3:331274/148‑1 (MQ=255) aCCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCCGGGGTGAGGGGAAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAggggg > 4:199578/1‑148 (MQ=255) aCCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCCGGGGTGAGGGGAAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAggggg < 7:317447/148‑1 (MQ=255) ccGTTCGGCGCTGTATGTACTCCCTCACTCTGAAATGAAACCGCACTCTTTTTTTCTCCCTCGCCCGTCCGGGGAGAGGGCCGGGGTTAGGGGAAAAGACCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGc < 6:114412/148‑1 (MQ=255) ccGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCCGGGGTGAGGGGAAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGc < 3:128460/148‑1 (MQ=255) ccGTGCTGCGCTGTATTTCCGCCCTCACTCTGAACCCCCCCCGCACTTTTTTTTTCTCCCTCGCCCCTCCGGGGAGTGGGCCGGGGTGAGGGGACAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGc < 6:75866/148‑1 (MQ=255) gTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCCGGGGTGAGGGGAAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAg > 1:307521/1‑148 (MQ=255) cGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCCGGGGTGCGGGGAAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTa < 3:306172/147‑1 (MQ=255) cGGCGCTGTATATCCTCCCTCCCCCTGAAACGACACCGCACGCTTTTTTTCTCCCTCGCCCCTCCGGGGCGAGGGCCGGGGGGCGGGGAAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTa < 3:186501/147‑1 (MQ=255) gtatgtaCTCCCTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCCGGGGTGAGGGGAAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATGCTaaa > 7:52441/1‑147 (MQ=255) tgtaCTCCCTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCCGGGGTGAGGGGAAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGt < 5:125383/136‑1 (MQ=255) tgtaCTCCCTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCCGGGGTGAGGGGAAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGt > 6:125383/1‑136 (MQ=255) gtaCTCCCTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCCGGGGTGAGGGGAAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATGCTAAACATCg > 6:182967/1‑148 (MQ=255) ctccctccCTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCCGGGGTGAGGGGAAAAGGCCCCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATGCTAAACATCGTAc > 4:202198/1‑148 (MQ=255) cTCCCTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCCGGGGTGAGGGGAAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATGCTAAACATCGTAc > 7:265965/1‑148 (MQ=255) cTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCCGGGGTGAGGGGAAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATGCTAAACATCGTACTTTa > 7:338429/1‑148 (MQ=255) cTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCCGGGGTGAGGGGAAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATGCTAAACATCGTACTTTa > 6:229196/1‑148 (MQ=255) cTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCCGGGGTGAGGGGAAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATGCTAAACATCGTACTTTa > 7:225087/1‑148 (MQ=255) aCTCTTAACCGACCCCGCACTATTTTTTGAACCGGCGCCCCTCGGGGTCGTGGGCGGGGGTGAGGGGAAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATGCTAAACATCGTACTTTAc < 7:231234/146‑1 (MQ=255) aCTCTGAAACGACCCCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCCGGGGTGAGGGGAAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATGCTAAACATCGTACTTTACGa < 4:143771/148‑1 (MQ=255) ctctGAAACGACACCGCACTCTTTTTTTCTCCCTTGCCCCTCCGGGGAGAGGGCCGGGGTGAGGGGAAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATGCTAAACATCGTACTTTACGaa > 6:153098/1‑148 (MQ=255) ctctGAAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCCGGGGTGAGGGGAAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATGCTAAACATCGTACTTTACGaa < 2:117682/148‑1 (MQ=255) tctGAACCGACACCGCACTCTTTTTTTCTCACTCGCCCCTCCGGGGAGAGTGCCGGGCAGAGCGGAAAAGGCCGCACTGCTCACCAATTTTCTGATATCCTGCCCCCGCACTAAGGGGGCAGTATGCTAAACATCgaa > 1:199920/1‑136 (MQ=255) ctGAAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCCGGGGTGAGGGGaaa < 1:206881/67‑1 (MQ=255) ctGAAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCCGGGGTGAGGGGaaa > 2:206881/1‑67 (MQ=255) acacCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCCGGGGTGAGGGGAAAAGGCCGCACTGCTCCCCAATTTTCTGCTATCCTGCCCCCGCACTATGGGGGCAGTATGCTAAACATCGTACTTTACGAACCAGAAATTc > 2:28963/1‑148 (MQ=255) acCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCCGGGGTGAGGGGAAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATGCTAAACATCGTACTTTACGAACCAGAAATTCCg < 8:265965/148‑1 (MQ=255) | TAAAGAGTTGCCTGCGGCACTGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCGCCCCCTCACCCTAACCCTCTCCCTCAGGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCCGGGGTGAGGGGAAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATGCTAAACATCGTACTTTACGAACCAGAAATTCCG > NC_000913/3780966‑3781250 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |