| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 3,806,430 | C→A | 5.6% | R213L (CGC→CTC) | waaG ← | UDP‑glucose:(heptosyl)lipopolysaccharide alpha‑1,3‑glucosyltransferase; lipopolysaccharide core biosynthesis protein; lipopolysaccharide glucosyltransferase I |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 3,806,430 | 0 | C | A | 5.6% | 444.8 / 5.5 | 140 | R213L (CGC→CTC) | waaG | UDP‑glucose:(heptosyl)lipopolysaccharide alpha‑1,3‑glucosyltransferase; lipopolysaccharide core biosynthesis protein; lipopolysaccharide glucosyltransferase I |
| Reads supporting (aligned to +/- strand): ref base C (84/47); new base A (2/7); total (86/54) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 2.74e-02 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 145 total aligned reads displayed.
TGCGACCGGAGAAGAAATGCACATTGCTCCGCACGCCGAGTTTTTCTGCCAGCGCTTCAAATTTTCGCGGCTTATCCTGACCAACAACAAATAAAAGCGTATTGTGACGTAATGATTCCGGTAACGATGCCAAAGCTTCAATTGAGCGATCTACACCTTTACGGCCAAAATCTGATCCAACCTGCAGTAATAAGTTTTGTTGCTCTTTTATGCCATTTTTCTGGCGATAAATTTCACGGCTGTTTGGGATTTGCTCACTGTATTTTCTGTCCGGATAAATACCGGGAGGA > NC_000913/3806284‑3806573 | cGACCGGAGAAGAAATGCACATTGCTCCGCACGCCGAGTTTTTCTGCCAGCGCTTCAATTTTTCGCGGCTTATCCTGACCAACAACAAATAAAAGCGTATTGTGACGTAATGATTCCGGTAACGATGCCAAAGCTTCAATTGAGCGa < 6:322095/147‑1 (MQ=255) cGACAGGATATGAAATGCACATTGCTCCGCACGCCGAGTTTTTCTGCCAGCGGTTCAAATTTTCGCGGCTTATCCTGACGTACCACAAATATAAGCGTATTGTGACGTAATGATTCCGGTAACGATGCCAAAGCTTCAATTGAGCGa < 3:355804/147‑1 (MQ=255) gACCGGAGAAGAAATGCACATTGCTCCGCACGCCGAGTTTTTCTGCCAGCGCTTCAAATTTTCGCGGCTTATCCTGACCAACAACAAATAAAAGCGTATTGTGACGTAATGATTCCGGTAACGATGCCAAAGCTTCAATTGAGCGATc < 4:291789/148‑1 (MQ=255) aCCGGAGAAGAAATGCACATTGCTCCGCACGCCGAGTTTTTCTGCCAGCGCTTCAAATTTTCGCGGCTTATCCTGACCAACAACAAATAAAAGCGTATTGTGACGTAATGATTCCGGTAACGATGCCAAAGCTTCAATTGAGCGATCt < 2:76907/148‑1 (MQ=255) ggAGAAGAAATGCACATTGCTCCGCACGCCGAGTTTTTCTGCCAGCGCTTCAAATTTTCGCGGCTTATCCTGACCAACAACAAATAAAAGCGTATTGTGACGTAATGATTCCGGTAACGATGCCAAAGCTTCAATTGAGCGATCTaca < 7:354999/148‑1 (MQ=255) gagaAGAAATGCACATTGCTCCGCACGCCGAGTTTTTCTGCCAGCGCTTCAAATTTTCGCGGCTTATCCTGACCAACAACAAATAAAAGCGTATTGTGACGTAATGATTCCGGTAACGATGCCAAAGCTTCAATTGAGCGATCTacac > 1:343411/1‑148 (MQ=255) agaaATGCACATTGCTCCGCACGCCGAGTTTTTCTGCCAGCGCTTCAAATTTTCGCGGCTTATCCTGACCAACAACAAATAAAAGCGTATTGTGACGGAATGATTCCGGTAACGATGCCAAAGCTTCAATTGAGCGATCTACACCtt > 1:363980/1‑147 (MQ=255) aaaTGCACATTGCTCCGCACGCCGAGTTTTTCTGCCAGCGCTTCAAATTTTCGCGGCTTATCCTGACCAACAACAAATAAAAGCGTATTGTGACGTAATGATTCCGGTAACGATGCCAAAGCTTCAATTGAGCGATCTACACCTTTAc > 4:308650/1‑148 (MQ=255) tGCACATTGCTCCGCACGCCGAGTTTTTCTGCCAGCGCTTCAAATTTTCGCGGCTTATCCTGACCAACAACAAATAAAAGCGTATTGTGACGTAATGATTCCGGTAACGATGCCAAAGCTTCAATTGAGCGATCTACACCTTTACGGc > 4:241906/1‑148 (MQ=255) acaTTGCTCCGCACGCCGAGTTTTTCTGCCAGCGCTTCAAATTTTCGCGGCTTATCCTGACCAACAACAAATAAAAGCGTATTGTGACGTAATGATTCCGGTAACGATGCCAAAGCTTCAATTGAGc > 1:107554/1‑127 (MQ=255) cTCCGCACGCCGAGTTTTTCTGCCAGCGCTTCAAATTTTCGCGGCTTATCCTGACCAACAACAAATAAAAGCGTATTGTGACGTAATGATTCCGGTAACGATGCCAAAGCTTCAATTGAGCGATCTACACCTTTACGGCCAAAATCTg < 5:216871/148‑1 (MQ=255) ccGCACGCCGAGTTTTTCTGCCAGCGCTTCAAATTTTAGAGGCTTATCCTGCACAACAACAAATAAAAGCGTATTGTGACGTAAAGAATCCGGTACAGATGCCAAAGCTTCAAGTGAGCGATCTACACCTTTACTGCCAAAAt > 6:221829/1‑143 (MQ=255) cGCACGCCGAGTTTTTCTGCCAGCGCTTCAAATTTTCGCGGCTTATCCTGACCAACAACAAATAAAAGCGTATTGTGACGTAATGATTCCGGTAACGATGCCAAAGCTTCAATTGAGCGATCTACACCTTTACGGCCAAAATCTGa < 3:56148/146‑1 (MQ=255) cACGCCGAGTTTTTCTGCCAGCGCTTCAAATTTTCGCGGCTTATCCTGACCAACAACAAATAAAAGCGTATTGTGACGTAATGATTCCGGTAACGATGCCAAAGCTTCAATTGAGCGa < 5:282567/118‑1 (MQ=255) cACGCCGAGTTTTTCTGCCAGCGCTTCAAATTTTCGCGGCTTATCCTGACCAACAACAAATAAAAGCGTATTGTGACGTAATGATTCCGGTAACGATGCCAAAGCTTCAATTGAGCGa > 6:282567/1‑118 (MQ=255) gCCGAGTTTTTCTGCCAGCGCTTCAAATTTTCGCGGCTTATCCTGAACAACAACAAATAAAAGCGTATTGTGACGTAATGATTCCGGTAACGATGCCAAAGCTTCAATTGAGCGATCTACACCTTTACGGCCAAAATCTGATCCAAcc > 6:168620/1‑148 (MQ=255) gAGTTTTTCTGCCAGCGCTTCAAATTTTCGCGGCTTATCCTGACCAACAACAAATAAAAGCGTATTGTGACGTAATGATTCCGGTAACGATGCCAAAGCTTCAATTGAGCGATCTACACCTTTACGGCCAAAATCTGATCCAACCTGc < 3:273124/148‑1 (MQ=255) aGTTTTTCTGCCAGCGCTTCAAATTTTCGCGGCTTATCCTGACCAACAACAAATAAAAGCGTATTGTGACGTAATGATTCCGGTAACGATGCCAAAGCTTCAATTGAGCGATCTACACGTTTACGGCCAAAATCTGATCCAACCTg > 5:291424/1‑146 (MQ=255) aGTTTTTCTGCCAGCGCTTCAAATTTTCGCGGCTTATCCTGACCAACAACAAATAAAAGCGTATTGTGACGTAATGATTCCGGTAACGATGCCAAAGCTTCAATTGAGCGATCTACACCTTTACGGCCAAAATCTGATCCAACCTg > 5:74940/1‑146 (MQ=255) gTTTTTCTGCCAGCGCTTCAAATTTTCGCGGCTTATCCTGACCAACAACAAATAAAAGCGTATTGTGACGTAATGATTCCGGTAACGATGCCAAAGCTTCAATTGAGCGATCTACACCTTTACGGCCAAAATCTGATCCAACCTGCAg > 8:334583/1‑148 (MQ=255) ttttCTGCCAGCGCTTCAAATTTTCGCGGCTTATCCTGACCAACAACAAATAAAAGCGTATTGTGACGTAATGATTCCGGTAACAATGCCAAAGATTCAATTGAGCGATCTACACCTTTACGTCCAAAATCTGATCCAACCTGAAGt > 2:141408/1‑147 (MQ=255) tCTGCCAGCGCTTCAAATTTTCGCGGCTTATCCTGACCAACAACAAATAAAAGCGTATTGTGACGTAATGATTCCGGTAACGATGCCAAAGCTTCAATTGAGCGATCTACACCTTTACGGCCAAAATCTGATCAAACCTGCAGtaat > 7:284378/1‑147 (MQ=255) cAAATTTTCGCGGCTTATCCTGACCAACAACAAATAAAAGCGTATTGTGACGTAATGATTCCGGTAACGATGCCAAAGCTTCAATTGAGCg < 2:321017/91‑1 (MQ=255) cAAATTTTCGCGGCTTATCCTGACCAACAACAAATAAAAGCGTATTGTGACGTAATGATTCCGGTAACGATGCCAAAGCTTCAATTGAGCg > 1:321017/1‑91 (MQ=255) ttttCGCGGCTTATCCTGACCAACAACAAATAAAAGCGTATTGTGACGTAATGATTCCGGTAACGATGCCAAAGCTTCAATTGAGCGATCTACACCTTTACGGCCAAAATCTGATCCAACCTGCAGTAATAAGTTTTGTTGCTCttt > 8:292873/1‑147 (MQ=255) ttctCGCGGCCAATCCTGACCAACAACAAATAAACGCGTATTCTGACGTAATGATTTTTTTTTTTTATTGATAGGTTGAATTGAGAGATCTACACCTTTACGGCCAAAATCTGATCCAACCTGCAGTAATAAGTTTTGTTGCTCtttt < 6:81521/145‑1 (MQ=255) ggCTTATCCTGACCAACAACAAATAAAAGCGTATTGTGACGTAATGATTCCGGTAACGATGCCAAAGCTTCAATTGAGCGATCTACACCTTTACGGCCAAAATCTGATCCAACCTGCAGTAATAAGTTTTGTTGCTCTTTTATGCCAt > 1:307221/1‑148 (MQ=255) ggCTTATCCTGACCAACAACAAATAAAAGCGTATTGTGACGAAATGATTCCGGTAACGATGCCAAAGCTTCAATTGAGCGATCTACACCTTTACGGCCAAAATCTGATCCAACCTGCAGTAATAAGATTTGTTGCTCTTTTATGCCAt > 2:78383/1‑148 (MQ=255) cTTATCCTGACCAACAACAAATAAAAGCGTATTGTGACGTAATGATTCCGGTAACGATGCCAAAGCTTCAATTGAGCGATCTACACCTTTACGGCCAAAATCTGATCCAACCTGCAGTAATAAGTTTTGTTGCTCTTTTATGCCAttt > 5:378091/1‑148 (MQ=255) ccTGACCAACAACAAATAAAAGCGTATTGTGACGTAATGATTCCGGTAACGATGCCAAAGCTTCAATTGAGCGATCTACCCCTTTACGGCCAAAATCTGATCCAACCTGCAGTAATAAGTTTTGTTGCTCTTTTATGCCATTTTTCTg > 1:170740/1‑148 (MQ=255) ccTGACCAACAACAAATAAAAGCGTATTGTGACGTAATGATTCCGGTAACGATGCCAAAGCTTCAATTGAGCGATCTACACCTTTACGGCCAAAATCTGATCCAACCTGCAGTAATAAGTTTTGTTGCTCTTTTATGCCATTTTTCTg > 4:225579/1‑148 (MQ=255) ccTGACCAACAACAAATAAAAGCGTATTGTGACGTAATGATTCCGGTAACGATGCCAAAGCTTCAATTGAGCGATCTACACCTTTACGGCCAAAATCTGATCCAACCAGCAGTAATAAGTTTTGTTGCTCTTTTATGCCATTTTTCTg > 4:116516/1‑148 (MQ=255) cTGACCAACAACAAATAAAAGCGTATTGTGACGTAATGATTCCGGTAACGATGCCAAAGCTTCAATTGAGCGATCTACACCTTTACGGCCAAAATCTGATCCAACCTGCa > 8:34741/1‑110 (MQ=255) cTGACCAACAACAAATAAAAGCGTATTGTGACGTAATGATTCCGGTAACGATGCCAAAGCTTCAATTGAGCGATCTACACCTTTACGGCCAAAATCTGATCCAACCTGCa < 7:34741/110‑1 (MQ=255) gACCAACAACAAATAAAAGCGTATTGTGACGTAATGATTCCGGTAACGATGCCAAAGCTTCAATTGAGCGATCTACACCTTTACGGCCAAAATCTGATCCAACCTGCAGTAATAAGTTTTGTTGctct > 4:325221/1‑128 (MQ=255) gACCAACAACAAATAAAAGCGTATTGTGACGTAATGATTCCGGTAACGATGCCAAAGCTTCAATTGAGCGATCTACACCTTTACGGCCAAAATCTGATCCAACCTGCAGTAATAAGTTTTGTTGCTCTTTTATGCAATTTTTCTGGc > 4:290802/1‑147 (MQ=255) gACCAACAACAAATAAAAGCGTATTGTGACGTAATGATTCCGGTAACGATGCCAAAGCTTCAATTGAGCGATCTACACCTTTACGGCCAAAATCTGATACAACCTGCAGTAATAAGTTTTGTTGCTCTTTTATGCCATTTTTCTGGc > 3:70037/1‑147 (MQ=255) aCCAACAACAAATAAAAGCGTATTGTGACGTAATGATTCCGGTAACGATGCCAAAGCTTCAATTGAGCGATCTACACCTTTACGGCCAAAATCTGATCCAACCTGCAGTAATAAGTTTTGTTGCTCTTTTATGCCATTTTTCTGGCGa > 5:188762/1‑148 (MQ=255) aacaacaaATAAAAGCGTATTGTGACGTAATGATTCCGGTAACGATGCCAAAGCTTCAATTGAGCGATCTCCACCTTTACGGCCAAAATCTGATCCAACCTGCAGTAATAAGTTTTGTTGCTCTTTTATGCCATTTTTCTGGCGATa > 1:347479/1‑147 (MQ=255) aacaacaaATAAAAGCGTATTGTGACGTAATGATTCCGGTAACGATGCCAAAGCTTCAATTGAGCGATCTACACCTTTACGGCCAAAATCTGATCCAACCTGCAGTAATAAGTTTTGTTGCTCtttt > 4:278997/1‑127 (MQ=255) aacaacaaATAAAAGCGTATTGTGACGTAATGATTCCGGTAACGATGCCAAAGCTTCAATTGAGCGATCTACACCTTTACGGCCAAAATCTGATCCAACCTGCAGTAATAAGTTTTGTTGCTCtttt < 3:278997/127‑1 (MQ=255) acaacaaATAAAAGCGTATTGTGACGTAATGATTTTTTTTTTTTATTGAAAGGGTGAATTGAGAGATCTACACCTTTACGGCCAAAATCTGATCCAACCTGCAGTAATAAGTTTTGTTGCTCTTTTATGCAATTTTTCTGGCGATaaa < 2:363980/148‑1 (MQ=255) acaacaaATAAAAGCGTATTGTGACGTAATGATTCCGGTAACGATGCCAAAGCTTCAATTGAGCGATCTACACCTTTACGGCCAAAATCTGATCCAACCTGCAGTAATAAGTTTTGTTGCTCTTTTATGCCATTTTTCTGGCGATaaa > 7:78804/1‑148 (MQ=255) acaaATAAAAGCGTATTGTTACGTAATGATTCCTTTTATTATTTGATAGGTTCAATTGAGAGATCTACACCTTTACGGCCAAAATCTGATCCAACCTGCAGTAATAAGTTTTGTTGCTCTTTTATGcc < 8:204455/128‑1 (MQ=255) acaaATAAAAGCGTATTGTGACGTAATGATTCCGGTAACGATGCCAAAGCTTCAATTGAGCGATCTACACCTTTACGGCCAAAATCTGATCCAACCTGCAGTAATAAGTTTTGTTGCTCTTTTATGCCATTTTTCTGGCGATAAAtt > 5:155018/1‑147 (MQ=255) caaATAAAAGCGTATTGTGACGTAATGATTCCGGTAACGATGCCAAAGCTTCAATTGAGCGATCTACACCTTTACGGCCAAAATCTGATCCAACCTGCAGTAATAAGTTTTGTTGCTCTTTTATGCCATTTTTCTGGCGATa > 2:319408/1‑142 (MQ=255) caaATAAAAGCGTATTGTGACGTAATGATTCCGGTAACGATGCCAAAGCTTCAATTGAGCGATCTACACCTTTACGGCCAAAATCTGATCCAACCTGCAGTAATAAGTTTTGTTGCTCTTTTATGCCATTTTTCTGGCGATAAAttt > 4:208273/1‑147 (MQ=255) caaATAAAAGCGTATTGTGACGTAATGATTCCGGTAACGATGCCAAAGCTTCAATTGAGCGATCTACACCTTTACGGCCAAAATCTGATCCAACCTGCAGTAATAAGTTTTGTTGCTCTTTTATGCCATTTTTCTGGCGATAAAttt > 4:270876/1‑147 (MQ=255) aaTAAAAGCGTATTGTGACGTAATGATTCCGGTAACGATGCCAAAGCTTCAATTGAGCGATCTACACCTTTACGGCCAAAATCTGATCCAACCTGCAGTAATAAGTTTTGTTGCTCTTTTATGCCATTTTTCTGGCGATAAATTTCAc > 6:353437/1‑148 (MQ=255) aTAAAAGCGTATTGTGACGTAATGATTCTGTTTTTGATGTGATAGGTTGAATTGAGAGATCTACACCTTTACGGCCAAAATCTGATCCAACCTGCAGTAATAAGTTTTGTTGCTCTTTTATGCCATTTTTCTg < 8:102372/133‑1 (MQ=255) aTAAAAGCGTATTGTGACGTAATGATTCCGGTAACGATGCCAAAGCTTCAATTGAGCGATCTACACCTTTACGGCCAAAATCTGATCCAACCTGCAGTAATAAGTTTTGTTGCTCTTTTATGCCATTTTTCTGGCGATAAATTTCACg > 4:305014/1‑148 (MQ=255) tAAAAGCGTATTGTGACGTAATGATTCCGGTAACGATGCCAAAGCTTCAATTGAGCGATCTACACCTTTACGGCCAAAATCTGATCCAACCTGCAGTAATAAGTTTTGTTGCTCTTTTATGCCATTTTTCTgg > 7:102372/1‑133 (MQ=255) tAAAAGCGTATTGTGACGTAATGATTCCGGTAACGATGCCAAAGCTTCAATTGAGCGATCTACACCTTTACGGCCAAAATCTGATCCAACCTGCAGTAATAAGTTTTGTTGCTCTTTTATGCCATTTTTCTGGCGATAAATTTCACgg > 5:365096/1‑148 (MQ=255) tAAAAGCGTATTGTGACGTAATGATTCCGGTAACGATGACAAAGCTTCAATTGAGCGATCTACACCTTTACGGCCAAAATCTGATCCAACCTGCAGTAATAAGTTTTGTTTCTCTTTTATGCCATTTTTCTGGCGATAAATTTAACgg > 5:196353/1‑148 (MQ=255) aGCGTATTGTGACGTAATGATTCCGGTAACGATGCCAAAGCTTCAATTGAGCGATCTACACCTTTACGGCCAAAATCTGATCCAACCTGCAGTAATAAGTTTTGTTGCTCTTTTATGCCATTTTTCTGGCGATAAATTTCACGGCTGt > 6:301824/1‑148 (MQ=255) gCGTATTGTGACGTAATGATTCCGGTAACGATGCCAAAGCTTCAATTGAGCGATCTACACCTTTACGGCCAAAATCTGATCCAACCTGCAGTAATAAGTTTTGTTGCTCTTTTATGCCATTTTTCTGGCGATAAATTTCACGGCTGtt < 7:283223/148‑1 (MQ=255) cGTATTGTGACGTAATGATTCCGTTATAGATTTCAAAGCTTCAATTGAGAGATCTACACCTTTACGGCCAAAATCTGATCCAACCTGCAGTAATAAGTTTTGTTGCTCTTTTATGCCATTTTTCTGGCGATAAATTTCACGGCTGttt < 2:343411/148‑1 (MQ=255) aTTGTGACGTAATGATTCCGGTAACGATGCCAAAGCTTCAATTGAGCGATCTACACCTTTACGGCCAAAATCTGATCCAACCTGCAGTAATAAGTTTTGTTGCTCTTTTATGCCATTTTTCTGGCGATAAATTTCACGGCTGTTTgg > 2:329844/1‑147 (MQ=255) aTTGTGACGTAATGATTCCGGTAACGATGCCAAAGCTTCAATTGAGCGATCTACACCTTTACGGCCAAAATCTGATCCAACCTGCAGTAATAAGTTTTGTTGCTCTTTTATGCCATTTTTCTGGCGATAAATTTCACGGCTGTTTgg > 5:78246/1‑147 (MQ=255) tgtgACGTAATGATTCCGGTAACGATGCCAAAGCTTCAATTGAGCGATCTACACCTTTACGGCCAAAATCTGATCCAACCTGCAGTAATAAGTTTTGTTGCTCTTTTATGCCATTTTTCTGGCGATAAATTTCACGGCTGTTTGGGAt > 4:250324/1‑148 (MQ=255) tgtgACGTAATGATTCCGGTAACGATGCAAAAGCTTCAATTGAGCGATCTACACGTTTACGGCCTAAATCTGATCCAACACGCAGTAATAAGTTTTGTTGGTCTTTTATGCCATTTTTCTGGCGATAAATTTCACGGCTGttttgtat > 5:322517/1‑143 (MQ=255) tgtgACGTAAGGATTCAGGTAACGATGCCAAAGCTTCAATTGAGCGATCTACACCTTTACGGCCAAAATCTGATCCAACATGCAGTAATAAGTTTTGTTTCTCTTTTATGCCATTTTTCTGGCGATAAATTTCACGTCTGTTTTGGAt > 7:162285/1‑148 (MQ=255) aCGTAATGCTTCCGGTAACGATGCCAAAGCTTCAATTGAGCGATCTACACCTTTACGGCCAAAATCTGATCCAACCTGCAGTAATAAGTTTTGTTGCTCTTTTATGCCATTTTTCTGGCGATAAATTTCACGGCTGTTTGGGATTTGc > 3:307295/1‑148 (MQ=255) gTAATGATTCCGGTAACGATGCCAAAGCTTCAATTGAGCGATCTACACCTTTACGGCCAAAATCTGATCCAACCTGCAGTAATAAGTTTTGTTGCTCTTTTATGCCATTTTTCTGGCGATAAATTTCACGGCTGTTTGGGATCTGCTc < 7:334583/148‑1 (MQ=255) gTAATGATTCAGGTAACGATGCCAAAGCTTCAATTGAGCGATCTACACCTTTACGGCCAAAATCTGATCCAAACTGCAGTAATAAGTTTTGTTGCTCTTTTATGCCATTTTTCTGGCGATAAATTTCACGGCTGTTTGGGATTTGCTc < 3:14909/148‑1 (MQ=255) tAATGATTCCGGTAACGATGCCAAAGCTTGAATTGAGCGATCTACACCTTTACGGCCAAAATCTGATCCAACCTGCAGTAATAAGTTTTGTTGCTCTTTTATGCCATTTTTCTGGCGATTAATTTCACGGCTGTTTGGGATTTGCTCa > 2:39126/1‑148 (MQ=255) tAATGATTCCGGTAACGATGCCAAAGCTTCAATTGAGCGATCTACACCTTTACGGCCAAAATCTGATCCAACCTGCAGTAATAAGTTTTGTTGCTCTTTTATGCCATTTTTCTGGCGATAAATTTCACGGCTGTTTGGGATTTGCTCa < 1:86778/148‑1 (MQ=255) aaTGATTCCGGTAACGATGCCAAAGCTTCAATTGAGCGATCTACACCTTTACGGCCAAAATCTGATCCAACCTGCAGTAATAAGTTTTGTTGCTCTTTTATGCCATTTTTCTGGCGATAAATTTCACGGCTGTTTGGGAt > 7:167341/1‑140 (MQ=255) aaTGATTCCGGTAACGATGCCAAAGCTTCAATTGAGCGATCTACACCTTTACGGCCAAAATCTGATCCAACCTGCAGTAATAAGTTTTGTTGCTCTTTTATGCCATTTTTCTGGCGATAAATTTCACGGCTGTTTGGGATTTGCTCAc > 8:384148/1‑148 (MQ=255) aaTGATTCAGTTTACGATGCCAAAGCTTCAATTGAGCGATCTACACCTTTACGGCCAAAATCTGATCCAACCTGCAGTAATAAGTTTTGTTGCTCTTTTATGCCATTTTTCTGGCGATAAATTTCACGGCTGTTTGGGATTTGCTc < 8:154858/146‑1 (MQ=255) aTGATTCCTGTAACGATGCCAAAGCTTCAATTGAGCGATCTACACCTTTACGGCCAAAATCATATCCAACCTGCAGTAATAAGTTTTGTTGCTCTTTTATGCCATTTTTCTGGCGATAAATTTCACGGCTGTTTGGGATTTGCTCAc < 1:77001/147‑1 (MQ=255) aTGATTCCGGTAACGATGCCAAAGCTTCAATTGAGCGATCTACACCTTTACGGCCAAAATCTGATCCAACCTGCAGTAATAAGTTTTGTTGCTCTTTTATGCCATTTTTCTGGCGATAAATTTAACGGCTGTTTGGGATTTGCTCAca > 7:154858/1‑147 (MQ=255) tGATTCCGGTAACGATGCCAAAGCTTCAATTGAGCGATCTACACCTTAACGGCCAAAATCTGATCCAACCTGCAGTAATAAGTTTTGTTGCTATTTTATGCCATTTTTCTGCCGATAAATTTCACGGCTGTTTGGGATTTCCTCACTg > 4:355705/1‑148 (MQ=255) gATTCCGGTAACGATGCCAAAGCTTCAATTGAGCGATCTACACCTTTACGGCCAAAATCTGATCCAACCTGCAGTAATAAGTTTTGTTGCTCTTTTATGCCATTTTTCTGGCGATAAATTTCACGGCTGTTTGGGATTTGCTCACTg > 8:200482/1‑147 (MQ=255) gATTCCGGTAACGATGCCAAAGCTTCAATTGAGCGATCTACACCTTTACGGCCAAAATCTGATCCAACCTGCAGTAATAAGTTTTGTTGCTCTTTTATGCCATTTTTCTGGCGATAAATTTCACGGCTGTTTGGGATTTGCTCACTg > 2:138684/1‑147 (MQ=255) gATTCCGGTAACGATGCCAAAGCTTCAATTGAGCGATCTACACCTTTACGGCCAAAATCTGATCCAACCTGCAGTAATAAGTTTTGTTGCTCTTTTATGCCATTTTTCTGGCGATAAATTTCACGGCTGTTTGGGATTTGCTCACTg > 7:289424/1‑147 (MQ=255) tcaggTAACGATGCCAAAGCTTCAATTGAGCGATCTACACCTTTACGGCCAAATTCTGATCCAACCTGCAGTAATAAGTTTTGTTGCTCTTTTATGACATTTTTCTGGCTATAAATTTCAAGGCTGTTTGGGATTTGCCCACTGTAtt > 6:114274/4‑148 (MQ=255) tCCGGTAACGATGCCAAAGCTTCAATTGAGCGATCTACACCTTTACGGCCAAAATATGATCAAACCTGCAGTAATAAGTTTTGTTGATCTTTTATGACATTTTTCTGGCGATAAATTTCACGGCTGTTTGGGATTTGCTCACTGTAtt > 7:378303/1‑148 (MQ=255) aCGATGCCAAAGCTTCAATTGAGCGATCTACACCTTTACGGCCAAAATCTGATCCAACCTGCAGTAATAAGTTTTGTTGCTCTTTTATGCCATTTTTCTGGCGATAAATTTCACGGCTGTTTGGGATTTGCTCACTGTATTTTCTGTc < 1:138684/148‑1 (MQ=255) aCGATGCCAAAGCTTCAATTGAGCGATCTACACCTTTACGGCCAAAATCTGATCCAACCTGCAGTAATAAGTTTTGTTGCTCTTTTATGCCATTTTTCTGGCGATAAATTTCACGGCTGTTTGGGATTTGCTCACTGTATTTTCTGTc < 3:225579/148‑1 (MQ=255) aCGATGCCAAAGCTTCAATTGAGCGATCTACACCTTTACGGCCAAAATCTGATCCAACCTGCAGTAATAAGTTTTGTTGCTCTTTTATGCCATTTTTCTGGCGATAAATTTCACGGCTGTGTGGGATTTGCTCACTGTATTTTCTGTc < 3:308650/148‑1 (MQ=255) cGATGCCAAAGCTTCAATTGAGCGATCTACACCTTTACGGCCAAAATCTGATCCAACCTGCAGTAATAAGTTTTGTTGCTCTTTTATGCCATTTTTCTGGCGATAAATTTCACGGCTGTTTGGGATTTGCTCACTGTATTTTCTGTcc > 2:78359/1‑148 (MQ=255) aTGCCAAAGCTTCAATTGAGCGATCTACACCTTTACGGCCAAAATCTGATCCAACCTGCAGTAATAAGTTTTGTTGCTCTTTTATGCCATTTTTCTGGCGATAAATTTCACGGCTGTTTGGGATTTGCTCACTGTATTTTCTGTCCgg < 7:312700/148‑1 (MQ=255) aTGCCAAAGCTTCAATTGAGCGATCTACACCTTTACGGCCAAAATCTGATCCAACCTGCAGTAATAAGTTTTGTTGCTCTTTTATGCCATTTTTCTGGCGATAAATTTCACGGCTGTTTGGGATTTGCTCACTGTATTTTCTGTCCg > 2:303887/1‑147 (MQ=255) aTGCCAAAGCTTCAATTGAGCGATCTACACCTTTACGGCCAAAATCTGATCCAACCTGCAGTAATAAGTTTTGTTGCTCTTTTATGCCATTTTTCTGGCGATAAATTTCACGGCTGTTTGGGATTTGCTCACTGTATTTTCTGTCCg > 8:227764/1‑147 (MQ=255) cAAAGCTTCAATTGAGCGATCTACACCTTTACGGCCAAAATCTGATCCAACCTGCAGTAATAAGTTTTGTTGCTCTTTTATGCCATTTTTCTGGCGATAAATTTCACGGCTGTTTGGGATTTGCTCACTGTATTTTCTGTCCGGATaa < 1:329844/148‑1 (MQ=255) aaaGCTTCAATTGAGCGATCTACACCTTTACGGCCAAAATCTGATCCAACCTGCAGTAATAAGTTTTGTTGCTCtttt < 6:57936/78‑1 (MQ=255) aaaGCTTCAATTGAGCGATCTACACCTTTACGGCCAAAATCTGATCCAACCTGCAGTAATAAGTTTTGTTGCTCTTTTATGCCAtttt < 3:94897/88‑1 (MQ=255) aaaGCTTCAATTGAGCGATCTACACCTTTACGGCCAAAATCTGATCCAACCTGCAGTAATAAGTTTTGTTGCTCTTTTATGCCATTTTTCTGGCGATAAATTTCACGGATGTTTGGGATTTGCTCACTGTATTTTCTGTCCGGATaaa > 4:61032/1‑148 (MQ=255) ttCAATTGAGCGATCTACACCTTTACGGCCAAAATCTGATCCAACCTGCAGTAATAAGTTTTGTTGCTCTTTTATGCCATTTTTCTGGCGATAAATTTCACGGCTGTTTGGGATTTGCTCACTGTATTTTCTGTCCGGATAAATACCg < 2:307221/148‑1 (MQ=255) tCAATTGAGCGATCTACACCTTTACGGCCAAAATCTGATCCAACCTGCAGTAATAAGTTTTGTTGCTCTTTTATGCCATTTTTCTGGCGATAAATTTCACGGCTGTTTGGGATTTGCTCACTGTATTTTCTGTCCGGATAAATACCg > 1:190289/1‑147 (MQ=255) cAATTGAGCGATCTACACCTTTACGGCCAAAATCTGATCCAACCTGCAGTAATAAGTTTTGTTGCTCTTTTATGCCATTTTTCTGGCGATAAATTTCACGGCTGTTTGGGATTTGCTCACTGTATTTTCTGTCCGGATAAATAcc < 2:190289/145‑1 (MQ=255) aaTTGAGCGATCTACACCTTTACGGCCAAAATCTGATCCAACCTGCAGTAATAAGTTTTGTTGGTCTTTTATGCCATTTTTCTGGCGATAAATTTCACGGCTGTTTGGGATTTGCTCACTGTTTTTTCTGTCCGTATAAATACCGgga < 3:116516/148‑1 (MQ=255) aaTTGAGCGATCTACACCTTTACGGCCAAAATCTGATCCAACCTGCAGTAATAAGTTTTGTTGCTCTTTTATGCCATTTTTCTGGCGATAAATTTCACGGCTGTTTGGGATTTGCTCACTGTATTTTCTGTCCGGATAAATACCggg < 3:23226/147‑1 (MQ=255) aTTTAGCGATCTACTCCTTTACGGGCAAAATCTGATCCAACCTGCTGTATTCAGTTTTGTTGATCTTTTATGCCATTTTTCTGGCGATAAATTTCACGGCTGTTTGGGATGTGCTCACTGTATTTTCTGTCCGGATAAATACCGggag < 1:316869/148‑1 (MQ=255) ttGAGCGATCTACACCTTTACGGCCAAAATCTGATCCAACCTGCAGTAATAAGTTTTGTTGCTCTTTTATGCCATTTTTCTGGCGATAAATTTCACGGCTGTTTGGGATTTGCTCACTGTATTTTCTGTCCGGATAAATACCGgga < 2:190208/146‑1 (MQ=255) ttGAGCGATCTACACCTTTACGGCCAAAATCTGATCCAACCTGCAGTAATAAGTTTTGTTGCTCTTTTATGCCATTTTTCTGGCGATAAATTTCACGGCTGTTTGGGATTTGCTCACTGTATTTTCTGTCCGGATAAATACCGgga > 1:190208/1‑146 (MQ=255) gAGCGATCTACACCTTTACGGCCAAAATCTGATCCAACCTGCAGTAATAAGTTTTGTTGCTCTTTTATGCCATTTTTCTGGCGATAAATTTCACGGCTGTTTGTGATTTGCTCACTGTATTTTCTGTCCGGATAAATACCGggagga < 3:208273/147‑1 (MQ=255) cGATCTACACCTTTACGGCCAAAATCTGATCCAACCTGCAGTAATAAGTTTTGTTGCTCTTTTATGCCATTTTTCTGGCGATAAATTTCACGGCTGTTTGGGATTTGCTCACt < 7:376148/113‑1 (MQ=255) cGATCTACACCTTTACGGCCAAAATCTGATCCAACCTGCAGTAATAAGTTTTGTTGCTCTTTTATGCCATTTTTCTGGCGATAAATTTCACGGCTGTTTGGGATTTGCTCACt > 8:376148/1‑113 (MQ=255) | TGCGACCGGAGAAGAAATGCACATTGCTCCGCACGCCGAGTTTTTCTGCCAGCGCTTCAAATTTTCGCGGCTTATCCTGACCAACAACAAATAAAAGCGTATTGTGACGTAATGATTCCGGTAACGATGCCAAAGCTTCAATTGAGCGATCTACACCTTTACGGCCAAAATCTGATCCAACCTGCAGTAATAAGTTTTGTTGCTCTTTTATGCCATTTTTCTGGCGATAAATTTCACGGCTGTTTGGGATTTGCTCACTGTATTTTCTGTCCGGATAAATACCGGGAGGA > NC_000913/3806284‑3806573 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |