| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 816,956 | C→A | 100% | intergenic (‑309/‑88) | ybhK ← / → moaA | putative CofD superfamily transferase/molybdopterin biosynthesis protein A |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 816,956 | 0 | C | A | 97.1% | 10628.0 / 137.0 | 3645 | intergenic (‑309/‑88) | ybhK/moaA | putative CofD superfamily transferase/molybdopterin biosynthesis protein A |
| Reads supporting (aligned to +/- strand): ref base C (58/55); new base A (1773/1755); total (1834/1811) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 8.49e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
| Rejected as polymorphism: Frequency below/above cutoff threshold. | |||||||||||
Only 100 of 3648 total aligned reads displayed.
TTTTCCCTTATTCTGTAGCGAAATAGCACGATCATGACGCTATATACATGATTACATAGCGAAAGTGTGGATGGTAAAAATCTCATTTACACGCTAGTATCGGCATAACCACTAAACACTCTAGCCTCTGCACCTGGGTCAACTGATACGGTGCTTTGGCCGTGACAATGCTCGTAAAGATTGCCACCAGGGCGAAGGAAGAAATGACTTCGCCTCCCGTATCTGGAAAGGTGTACATGGCTTCACAACTGACTGATGCATTTGCGCGTAAGTTTTACTACTTGCGCCTGTCGATTA > NC_000913/816808‑817104 | cccTTATTCTGTAGCGAAATAGCACGATCATGACGCTATATACATGATTACATAGCGAAAGTGTGGATGGTAAAAATCTCATTTACACGCTAGTATCGGCATAACCACTAACCACTCTAGCCTCTGCACCTGGGTCAACTGATAAGGTg > 8:142037/1‑149 (MQ=255) cccTTATTCTGTAGCGAAATAGCACGATCATGACGCTATATACATGATTACATAGCGAAAGTGTGGATGGTAAAAATCTCATTTACACGCTAGTATCGGCATAACCACTAAACACTCTAGCATCTGCACCTGGGTCAACTGATACGGTg > 8:348712/1‑149 (MQ=255) cTTATTCTGTAGCGAAATAGCACGATCATGACGCTATATACATGATTACATAGCGAAAGTGTGGATGGTAAAAATCTCATTTACACGCTAGTATCGGCATATCCACTAAACACTCTAGCCTCTGCACCTGGGTCAACTGATAAGGTGCt > 4:309461/1‑149 (MQ=255) ttATTCTGTAGCGAAATAGCACGATCATGACGCTATATACATGATTACATAGCGAAAGTGTGGATGGTAAAAATCTCATTTACACGCTAGTATCGGCATAACCACTAAACACTCTAGCCTCTGCACCTGGGTCAACTGATAAGGTGCtt > 7:307826/1‑149 (MQ=255) aTTCTGTAGCGAAATAGCACGATCATGACGCTATATACATGATTACATAGCGAAAGTGTGGATGGTAAAAATCTCATTTACACGCTAGTATCGGCATAACCACTAAACACTCTAGCCTCTGCACCTGGGTCAACTGATAAGGTGCtt < 1:100235/147‑1 (MQ=255) ttCTGTATCGAAATAGCACGATCATGTCGCTATATACATGATTACATATCGAAAGTGTGGATGGTAAAAATCTCATTTACACGCTAGTATCGGCATAACCACTAAACACTCTAGCCTCTGCACCTGGGTCAACTGATAAGGTGCTTTgg < 6:48020/149‑1 (MQ=255) tAGCGAAATAGCACGATCATGACGCTATATACATGATTACATAGCGAAAGTGTGGATGGTAAAAATCTCATTTACACGCTAGTATCGGCATAACCACTAAACACTCTAGCCTCTGCACCTGGGTCAACTGATAAGGTGCTTTGGCCGt > 1:17838/1‑148 (MQ=255) tAGCGAAATAGCACGATCATGACGCTATATACATGATTACATAGCGAAAGTGTGGATGGTAAAAATCTCATTTACACGCTAGTATCAGCATAACCACTAAACACTCTAGCCTCTGCACCTGGGTCAACTGATAAGGTGCTTTGGcc < 3:329796/146‑1 (MQ=255) gCGAAATAGCACGATCATGACGCTATATACATGATTACATAGCGAAAGTGTGGATGGTAAAAATCTCATTTACACGCTAGTATCGGCATAACCACTAAACACTCTAGCCTCTGCACCTGGGTCAACTGATAAGGTGCTTTGGCCGTGa < 7:109695/148‑1 (MQ=255) aaTAGCACGATCATGCCGCTATATACATGATTACATAGCGAAAGTGTGGATGGTAAAAATCTCATTTACACGCTAGTATCGGCATAACCACTAAACACTCTAGACTCTGCACCTGGGTAAACTGATAAGGTGCTTTGGCCGTGACAATg > 3:236322/1‑149 (MQ=255) aaTAGCACGATCATGACGCTATATACATGATTACATAGCGAAAGTGTGGATGGTAAAAATCTCATTTACACGCTAGTATCGGCATAACCACTAAACACTCTAGCCTCTGCACCTGGGTCAACTGATACGGTGCTTTGGCCGTGACAATg > 5:75592/1‑149 (MQ=255) aTAGCACGATCATGACGCTATATACATGATTACATAGCGAAAGTGTGGATGGTAAAAATCTCATTTACACGCTAGTATCGGCATAACCACTAAACACTCTAGCCTCTGCACCTGGGTCAACTGATAAGGTGCTTTGGCCGTGACAATGc < 7:195499/149‑1 (MQ=255) gCACGATCATGACGCTATATACATGATTACATAGCGAAAGTGTGGATGGTAAAAATCTCATTTACACGCTAGTATCGGCATAACCACTAAACACTCTAGCCTCTGCACCTGGGTCAACTGATAAGGTGCTTTGGCCGTGACAATGCTCg < 3:85272/149‑1 (MQ=255) cACGATCATGACGCTATATACATGATTACATAGCGAAAGTGTGGATGGTAAAAATCTCATTTACACGCTAGTATCGGCATAACCACTAAACACTCTAGCCTCTGCACCTGGGTCAACTGATAAGGTGCTTTGGCCGTGACAATGCTCg > 6:228445/1‑148 (MQ=255) aCGATCATGACGCTATATACATGATTACATAGCGAAAGTGTGGATGGTAAAAATCTCATTTACACGCTAGTATCGGCATAACCACTAAACACTCTAGCCTCTGCACCTGGGTCAACTGATAAGGTGCTTTGGCCGTGACAATGCTCGt > 6:176879/1‑148 (MQ=255) gATCATGACGCTATATACATGATTACATAGCGAAAGTGTGGATGGTAAAAATCTCATTTACACGCTAGTATCGGCATAACCACTAAACACTCTAGCCTCTGCACCTGGGTCAACTGATAAGGTGCTTTGGCCGTGACAATGCTCGTaaa < 8:283764/149‑1 (MQ=255) aTCATGACGCTATATACATGATTACATAGCGAAAGTGTGGATGGTAAAAATCTCATTTACACGCTAGTATCGGCATAACCACTAAACACTCTAGCCTCTGCACCTGGGTCAACTGATAAGGTGCTTTGGCCGTGACAATGCTCGTAAAg < 8:194260/149‑1 (MQ=255) aTGACGCTATATACATGATTACATAGCGAAAGTGTGGATGGTAAAAATCTCATTTACACGCTAGTATCGGCATAACCACTAAACACTCTAGCCTCTGCACCTGGGTCAACTGATAAGGTGCTTTGGCCGTGACAATGCTCGTAAAGAtt < 2:360007/149‑1 (MQ=255) aTGACGCTATATACATGATTACATAGCGAAAGTGTGGATGGTAAAAATCTCATTTACACGCTAGTATCGGCATAACCACTAAACACTCTAGCCTCTGCACCTGGGTCAACTGATAAGGTGCTTTGGCCGTGACAATGCTCGTAAAGAtt < 1:119401/149‑1 (MQ=255) aTGACGCTATATACATGATTACATAGCGAAAGTGTGGATGGTAAAAATCTCATTTACACGCTAGTATCGGCATAACCACTAAACACTCTAGCCTCTGCACCTGGGTCAACTGATAAGGTGCTTTGGACGTGAAAATGCTCTTAAAGAtt > 3:364388/1‑149 (MQ=255) aCGCTATATACATGATTACATAGCGAAAGTGTGGATGGTAAAAATCTCATTTACACGCTAGTATCGGCATAACCACTAAACACTCTAGCCTCTGCACCTGGGTCAACTGATAAGGTGCTTTGGCCGTGACAATGCTCGTAAAGATTGcc > 3:283737/1‑149 (MQ=255) aCGCTATATACATGATTACATAGCGAAAGTGTGGATGGTAAAAATCTCATTTACACGCTAGTATCGGCATAACCACTAAACACTCTAGCCTCTGCACCTGGGTCAACTGATAAGGTGCTTTGGCCGTGACAATGCTCGTAAAGATTGc < 5:164891/148‑1 (MQ=255) aCGCTATATACATGATTACATAGCGAAAGTGTGGATGGTAAAAATCTCATTTACACGCTAGTATCGGCATAACCACTAAACACTCTAGCCTCTGCACCTGGGTCAACTGATAAGGTGCTTTGGCCGTGACAATGCTCGTAAAGATTGc < 1:146900/148‑1 (MQ=255) tatataCATGATTACATAGCGAAAGTGTGGATGGTAAAAATCTCATTTACACGCTAGTATCGGCATAACCACTAAACACTCTAGCCTCTGCACCTGGGTCAACTGATAAGGTGCTTTGGCCGTGACAATGCTCGTAAAGATTGccac > 2:24126/1‑147 (MQ=255) aCATGATTACATAGCGATAGTGTGGATGGTAAAAATCTCATTTACACGCTAGTATCGGCATAACCTCTATACACTCTAGCCTCTGCCGCTGGGTCAAGTGATAAGGTGCTTTGGCCGTGGCAATGCTCGTAAAGATTGCCACCAGGGC > 5:279256‑M1/1‑148 (MQ=255) cATGATTACATAGCGAAAGTGTGGATGGTAAAAATCTCATTTACACGCTAGTATCGGCATAACCACTAAACACTCTAGCCTCTGCACCTGGGTCAACTGATAAGGTGCTTTGGCCGTGACAATGCTCGTAAAGATTGCCACCAGGGCG > 6:149673‑M1/1‑148 (MQ=255) aTGATTACATAGCGAAAGTGTGGATGGTAAAAATCTCATTTACACGCTAGTATCGGCATAACCACTAAACACTCTAGCCTCTGCACCTGTGTCAACTGATAAGGTGCTTTGGCCGTGACAATGCTCGTAAAGATTGCCACCAGGGCGAA < 1:318070‑M1/149‑1 (MQ=255) aTGATTACATAGCGAAAGTGTGGATGGTAAAAATCTCATTTACACGCTAGTATCGGCATAACCACTAAACACTCTAGCCTCTGCACCTGGGTCAACTGATAAGGTGCTTTGGCCGTGACAATGCTCGTAAAGATTGCCACCAGGGCGAA < 6:362279‑M1/149‑1 (MQ=255) aTGATTACATAGCGAAAGTGTGGATGGTAAAAATCTCATTTACACGCTAGTATCGGCATAACCACTAAACACTCTAGCCTCTGCACCTGGGTCAACTGATAAGGTGCTTTGGCCGTGACAATGCTCGTAAAGATTGCCACCAGGGCGAA < 2:163266‑M1/149‑1 (MQ=255) aTGATTACATAGCGAAAGTGTGGATGGTAAAAATCTCATTTACACGCTAGTATCGGCATAACCACTAAACACTCTAGCCTCTGCACCTGGGTCAACTGATAAGGTGCTTTGGCCGTGACAATGCTCGTAAAGATTGCCACCAGGGCGAA < 3:188192‑M1/149‑1 (MQ=255) cATAGCGAAAGTGTGGATGGTAAAAATCTCATTTACACGCTAGTATCGGCATAACCACTAAACACTCTAGCCTCTGCACCTGGGTCAACTGATAAGGTGCTTTGGCCGTGACAATGCTCGTAAAGATTGCCACCAGGGCGAAGgaaga > 7:138263/1‑148 (MQ=255) aTAGCGAAAGTGTGGATGGTAAAAATCTCATTTACACGCTAGTATGGGCATAACCACTAAACACTCTAGCCTCTGCACCTGGGTCAACTGATAAGGTGCTTTGGCCGTGACAATGCTCGTAAAGATTGCCACCAg < 4:229275/135‑1 (MQ=255) aTAGCGAAAGTGTGGATGGTAAAAATCTCATTTACACGCTAGTATCGGCATAACCACTAAACACTCTAGCCTCTGCACCTGGGTCAACTGATAAGGTGCTTTGGCCGTGACAATGCTCGTAAAGATTGc > 1:84903/1‑129 (MQ=255) aTAGCGAAAGTGTGGATGGTAAAAATCTCATTTACACGCTAGTATCGGCATAACCACTAAACACTCTAGCCTCTGCACCTGGGTCAACTGATAAGGTGCTTTGGCCGTGACAATGCTCGTAAAGATTGCCACCAGGGCGAAGGAAGaaa < 6:127135/149‑1 (MQ=255) tAGCGAAAGTGTGGATGGTAAAAATCTCATTTACACGCTAGTATCGGCATAACCACTAAACACTCTAGCCTCTGCACCTGGGTCAACTGATAAGGTGCTTTGGCCGTGACAATGCTCGTAAAGATTGCCCCCAGGGCGAAGGAAGAAAt > 8:73555/1‑149 (MQ=255) tAGCGAAAGTGTGGATGGTAAAAATCTCATTTACACGCTAGTATCGGCATAACCACTAAACACTATAGCCTCTGCACCTGGGTCAACTGATAAGGTGCTTTGGCCGTGACAATGCTCGTAAAGATTGCCACCAGGGCGAAGGAAGAAAt < 5:39896/149‑1 (MQ=255) aGCGAAAGTGTGGATGGTAAAAATCTCATTTACACGCTAGTATCGGCATAACCACTAAACACTCTAGCCTCTGCACCTGGGTCAACTGATAAGGTGCGTTGGCCGTGACAATGCTCGGAAAGCTTGACACCCGTGCGAAGGATGAAAt > 5:195709/1‑148 (MQ=255) aGCGAAAGTGTGGATGGTAAAAATCTCATTTACACGCTAGTATCGGCATAACCACTAAACACTCTAGCCTCTGCACATGGGTCAACTGATAAGGTGCTTTGGCCGTGACAATGCTCGTAAAGATTGCCACCAGGGCGAAGGAAGAAAt > 2:22141/1‑148 (MQ=255) gCGAAAGTGTGGATGGTAAAAATCTCATTTACACGCTAGTATCGGCATAACCACTAAACACTCTAGCCTCTGCACCTGGGTCAACTGATAAGGTGCTTTGGCCGTGACAATGCTCGTAAAGATTGCCACCAGGGCGAAGGAAGAAATGa > 4:259750/1‑149 (MQ=255) gAAAGTGTGGATGGTAAAAATCTCATTTACACGCTAGTATCGGCATAACCACTAAACACTCTAGCCTCTGCACCTGGGTCAACTGATAAGGTGCTTTGGCCGTGACAATGCTCGTAAAGATTGc > 2:54832/1‑124 (MQ=255) gAAAGTGTGGATGGTAAAAATCTCATTTACACGCTAGTATCGGCATAACCACTAAACACTCTAGCCTCTGCACCTGGGTCAACTGATAAGGTGCTTTGGCCGTGACAATGCTCGTAAAGATTGc < 1:54832/124‑1 (MQ=255) gAAAGTGTGGATGGTAAAAATCTCATTTACACGCTAGTATCGGCATAACCACTAAACACTCTAGCCTCTGCACCTGGGTCAACTGATAAGGTGCTTTGGCCGTGACAATGCTCGTAAAGATTGCCACCAGGGCGAAGgaagaa < 6:338858/143‑1 (MQ=255) tgGATGGTAAAAATCTCATTTACACGCTAGTATCGGCATAACCACTAAACACTCTAGCCTCTGCACCTGGGTCAACTGATAAGGTGCTTTGGCCGTGACAATGCTCGTAAAGATTGCCACCAGGGCGAAGtcatttcttccttcgccct < 7:161370‑M1/149‑20 (MQ=255) tgGATGGTAAAAATCTCATTTACACGCTAGTATCGGCATAACCACTAAACACTCTAGCCTCTGCACCTGGGTCAACTGATAAGGTGCTTTGGCCGTGACAATGCTCGTAAAGATTGCCACCAGGGCGAAGGAAGAAATGACTTCGCCTc < 5:298289/149‑1 (MQ=255) gATGGTAAAAATCTCATTTACACGCTAGTATCGGCATAACCACTAAACACTCTAGCCTCTGCACCTGGGTCAACTGATAAGGTGCTTTGGCCGTGACAATGCTCGTAAAGATTGCCACCAGGGCGAAGGAAGAAATGACTTCGCCTccc > 2:273316/1‑149 (MQ=255) aTGGTAAAAATCTCATTTACACGCTAGTATCGGCATAACCACTAAACACTCTAGCCTCTGCACCTGGGTCAACTGATAAGGTGCTTTGGCCGTGACAATGCTCGTAAAGATTGCCACCAGGGCGAAGtcatttcttccttcgccctgg < 7:222353‑M1/148‑22 (MQ=255) ggTAAAAATCTCATTTACACGCTAGTATCGGCATAACCACTAAACACTCTAGCCTCTGCACCTGGGTCAACTGATAAGGTGCTTTGGCCGTGACAATGCTCGTAAAGATTGCCACCAGGGCGAAGGAAGAAATGACTTCGCCTCCCGTa > 8:320129/1‑149 (MQ=255) tAAAAATCTCATTTACACGCTAGTATCGGCATAACCACTAAACACTCTAGCCTCTGCACCTGGGTCAACTGATAAGGTGCTTTGGCCGTGACAATGCTCGTAAAGATTGCCACCAGGGCGAAGGAAGAAATGACTTCGCCTCCCGTATc > 6:206393/1‑149 (MQ=255) aaaTCTCATTTACACGCTAGTATCGGCATAACCACTAAACACTCTAGCCTCTGCACCTGGGTCAACTGATAAGGTGCTTTGGCCGTGACAATGCTCGTAAAGATTGCCACCAGGG < 3:16177‑M1/115‑1 (MQ=255) tcATTTACACGCTAGTATCGGCATAACCACTAAACACTCTAGCCTCTGCACCTGGGTCAACTGATAAGGTGCTTTGGCCGTGACAATGCTAGTAAAGATTGCCACCAGGGCGAAGGAAGAAATGACTTCGCCTCCCGTATCTGGAAAgg > 5:135702/1‑149 (MQ=255) aTTTACACGCTAGTATCGGCATAACCACTAAACACTCTAGCCTCTGCACCTGGGTCAACTGATAAGGTGCTTTGGCCGTGACAATGCTCGTAAAGATTGCCACCAGGGCGAAGGAAGAAATGACTTCGCCTCCCGTATCTGGAAAGgtg > 5:102209/1‑149 (MQ=255) aTTTACACGCTAGTATCGGCATAACCACTAAACACTCTAGCCTCTGCACCTGGGTCAACTGATAAGGTGCTTTGGCCGTGACAATGCTCGTAAAGATTGCCACCAGGGCGAAGGAAGAAATGACTTCGCCTCCCGTATCTGGAAAGgtg > 1:377859/1‑149 (MQ=255) aTTTACACGCTAGTATCGGCATAACCACTAAACACTCTAGCCTCTGCACCTGGGTCAACTGATAAGGTGCTTTGGCCGTGACAATGCTCGTAAAGATTGCCACCAGGGCGAAGGAAGAAATGACTTCGCCTCCCGTATCTGGAAAGgtg > 5:33304/1‑149 (MQ=255) aTTTACACGCTAGTATCGGCATAACCACTAAACACTCTAGCCTCTGCACCTGGGTCAACTGATAAGGTGCTTTGGCCGTGACAATGCTCGTAAAGATTGCCACCAGGGCGAAGGAAGAAATGACTTCGCCTCCCGTATCTGGAAAGgt > 7:281043/1‑148 (MQ=255) acacGCTAGTATCGGCATAACCACTAAACACTCTAGCCTCTGCACCTGGGTCAACTGATAAGGTGCTTTGGCCGTGACAATGCTCGTAAAGATTGCCACCAGGGCGAAGGAAGAAATGACTTCGCCTCCCGTATCTGGAAAGGTGTa > 4:286445/1‑147 (MQ=255) acacGCTAGTATCGGCATAACCACTAAACACTCTAGCCTCTGCACCTGGGTCAACTGATAAGGTGCTTTGGCCGTGACAATGCTCGTAAAGATTGCCACCAGGGCGAAGGAAGAAATGACTTCGCCTCCCGTATCTGGAAAGGTGTAc < 6:81244/148‑1 (MQ=255) acGCTAGTATCGGCATAACCACTAAACACTCTAGCCTCTGCACCTGGGTCAACTGATAAGGTGCTTTGGCCGTGACAATGCTCGTAAAGATTGCCACCAGGGCGAAGGAAGAAATGACTTCGCCTCCCGTATCTGGAAAGGTGTACATg > 2:109743/1‑149 (MQ=255) gCTAGTATCGGCATAACCACTAAACACTCTAGCCTCTGCACCTGGGGCAACTGATAAGGTGCTTTGGCCGTGACAATGCTCGTAAAGATTGCCACCAGGGCGAAGTAAGAAATGACTTCGCCTCCCGTATCTGGAAAg < 3:259899/138‑1 (MQ=255) tAGTATCGGCATAACCACTAAACACTCTAGCCTCTGCACCTGGGTCAACTGATAAGGTGCTTTGGCCGTGACAATGCTCGTAAAGATTGCCACCAGGGCGAAGGAAGAAATGACTTCGCCTCCCGTATCTGGAAAGGTGTACATGGCtt > 8:111876/1‑149 (MQ=255) tAGTATCGGCATAACCACTAAACACTCTAGCCTCTGCACCTGGGTCAACTGATAAGGTGCTTTGGCCGTGACAATGCTCGTAAAGATTGCCACCAGGGCGAAGGAAGAAATGACTTCGCCTCCCGTATCTGGAAAGGTGTACATGGCtt > 4:200511/1‑149 (MQ=255) gTATCGGCATAACCACTAAACACTATAGCCTGTGCACCTGTGTCATCTGATAAGGTGCTTTGGCCGTGACAATGCTCGTAATGATTGCCACCAGGGCGAAGGTAGAAATGACTTCGCCTCCCGTATCTGGAAAGGTGTACATgtattc < 2:193864/148‑6 (MQ=255) cGGCATAACCACTAAACACTCTAGCCTCTGCACCTGGGTCAACTGATAAGGTGCTTTGGCCGTGACAATGCTCGTAAAGATTGCCACCAGGGCGAAGGAAGAAATGACTTCGCCTCCCGTATCTGGAAAGGTGTACATGGCTTCACAac > 2:326696/1‑149 (MQ=255) ggCATAACCACTAAACACTCTAGCCTCTGCACCTGGGTCAACTGATAAGGTGCTTTGGCCGTGACAATGCTCGTAAAGATTGCCACCAGGGCGAAGGAAGAAATGACTTCGCCTCCCGTATCTGGAAAGGTGTACATGGCTTCACAac < 4:121377/148‑1 (MQ=255) ggCATAACCACTAAACACTCTAGCCTCTGCACCTGGGTCAACTGATAAGGTGCTTTGGCCGTGACAATGCTCGTAAAGATTGCCACCAGGGCGAAGGAAGAAATGACTTCGCCTCCCGTATCTGGAAAGGTGTACATGGCTTCACAac < 3:113674/148‑1 (MQ=255) ggCATAACCACTAAACACTCTAGCCTCTGCACCTGGGTCAACTGATAAGGTGCTTTGGCCGTGACAATGCTCGTAAAGATTGCCACCAGGGCGAAGGAAGAAATGACTTCGCCTCCCGTATCTGGAAAGGTGTACATGGCTTCACAac < 6:283900/148‑1 (MQ=255) aTAACCACTAAACACTCTAGCCTCTGCACCTGGGTCAACTGATAAGGTGCTTTGGCCGTGACAATGCTCGTAAAGATTGCCACCAGGGCGAAGGAAGAAATGACTTCGCCTCCCGTATCTGGAAAGGTGTACATGGCTTCACAactgac > 4:61636/1‑149 (MQ=255) gcACTAAAGACTCTAGCCTCTGCACCTGGGTCATCTGATAAGGTGCTTTGGCCGTTACAATGCTCGTATTGATTTGGTTCAGTTAGAAGGTAGAAATGAGTTCGCCTCCCGTATCTTGAATGGTGTACATTGCTTCACAACTGACTGAt < 8:166243/148‑1 (MQ=255) ccACTAAACACTCTAGCCTCTGCACCTGGGTCAACTGATAAGGTGCTTTGGCCGTGACAATGCTCGTAAAGATTGCCACCAGGGCGAAGGAAGAAATGACTTCGCCTCCCGTATCTGGAAAGGTGTACATGGCTTCACAACTGACTGAt < 2:296316/149‑1 (MQ=255) ccACTAAACACTCTAGCCTCTGCACCTGGGTCAACTGATAAGGTGCTTTGGCCGTGACAATGCTCGTAAAGATTGCCACCAGGGCGAAGGAAGAAATGACTTCGCCTCCCGTATCTGGAAAGGTGTACATGGCTTCACAACTGACTGAt > 3:137964/1‑149 (MQ=255) cACTAAACACTCTAGCCTCTGCACCTGGGTCAACTGATACGGTGCTTTGGCCGTGACAATGCTCGTAAAGATTGCCACCAGGGCGAAGGAAGAAATGACTTCGCCTCCCGTATCTGGAAAGGTGTACATGGCTTCACAACTGACTGATg > 8:46226/1‑149 (MQ=255) cACTAAACACTCTAGCCTCTGCACCTGGGTCAACTGATAAGGTGCTTTGGCCGTGACAATGCTCGTAAAGATTGCCACCAGGGCGAAGGAAGAAATGACTTCGCCTCCCGTATCTGGAAAGGTGTACATGGCTTCACAACTGACTGATg > 2:383290/1‑149 (MQ=255) cACTAAACACTCTAGCCTCTGCACCTGGGTCAACTGATAAGGTGCTTTGGCCGTGACAATGCTCGTAAAGATTGCCACCAGGGCGAAGGAAGAAATGACTTCGCCTCCCGTATCTGGAAAGGTGTACATGGCTTCACAACTGACTGATg > 4:174390/1‑149 (MQ=255) aCTAAACACTCTAGCCTCTGCACCTGGGTCAACTGATAAGGTGCTTTGGCCGTGACAATGCTCGTAAAGATTGCCACCAGGGCGAAGGAAGAAATGACTTCGCCTCCCGTATCTGGAAAGGTGTACATGGCTTCACAACTGACTGATg > 1:209587/1‑148 (MQ=255) cTAAACACTCCAGCCTCTGCACCTGGGTCAACTGATAAGGTGCTTTGGCCGTGACAATGCTCGTAAAGATTGCCACCAGGGCGAAGGAAGAAATGACTTCGCCTCCCGTATCTGGAAAGGTGTACATGGCTTCACAACTGACTGATGCa > 4:336690/1‑149 (MQ=255) tAAACACTCTAGCCTCTGCACCTGGGTCAACTGATAAGGTGCTTTGGCCGTGACAATGCTCGTAAAGATTGCCACCAGGGCGAAGGAAGAAATGACTTCGCCTCCCGTATCTGGAAAGGTGTACATGGCTTCACAActgactga > 3:306892/1‑144 (MQ=255) tAAACACTCTAGCCTCTGCAAATGGGTCAACTGATAAGGTGCTTTGGCCGTGACATGCCACGTAAAGATTGCCACCCGGGCGAAGGAAGAAATGACTTCGCCTCCCGTTTATGGAAAGGTGTACATGGCTACACACCTGACAGATGCAt > 8:252236/1‑149 (MQ=255) aaCACTCTAGCCTCTGCACCTGGGTCAACTGATAAGGTGCTTTGGCCGTGACAATGCTCGTAAAGATTGCCACCAGGGCGAAGGAAGAAATGACTTCGCCTCCCGTATCTGGAAAGGTGTACATGGCTTCACAACTGACTGATGCAttt > 1:232724/1‑149 (MQ=255) aaCACTCTAGCCTCTGCACCTGGGTCAACTGATAAGGTGCTTTGGCCGTGACAATGCTCGTAAAGATTGCCACCAGGGCGAAGGAAGAAATGACTTCGCCTCCCGTATCTGGAAAGGTGTACATGGCTTCACAACTGACTGATGCAttt < 1:353912/149‑1 (MQ=255) cacTCTAGCCTCTGCACCTGGGTCAACTGATACGGTGCTTTGGCCGTGACAATGCTCGTAAAGATTGCCACCAGGGCGAAGGAAGAAATGACTTCGCCTCCCGTATCTGGAAAGGTGTACATGGCTTCACAACTGACTGATGCATTTgc < 8:378809/149‑1 (MQ=255) cacTCTAGCCTCTGCACCTGGGTCAACTGATAAGGTGCTTTGGCCGTGACAATGCTCGTAAAGATTGCGACCAGGGCGAAGGAAGATATGACTTCGCCTGCCGTAGCTGTAAAGGTGTACATGGCTTCACAACTGACTGATGCATTTgc < 3:21170/149‑1 (MQ=255) cacTCTAGCCTCTGCACCTGGGTCAACTGATAAGGTGCTTTGGCCGTGACAATGCTCGTAAAGATTGCCACCAGGGCGAAGGAAGAAATGACTTCGCCTCCCGTATCTGGAAAGGTGTACATGGCTTCACAACTGACTGATGCATTTgc < 8:222587/149‑1 (MQ=255) tctAGCCTCTGCACCTGGGTCAACTGATAAGGTGCTTTGGCCGTGACAATGCTCGTAAAGATTGCCACCAGGGCGAAGGAAGAAATGACTTCGCCTCCCGTATCTGGAAAGGTGTACATgg > 5:353418/1‑121 (MQ=255) tAGCCTCTGCACCTGGGTCAACTGATAAGGTGCTTTGGCCGTGACAATGCTCGTAAAGATTGCCACCAGGGCGAAGGAAGAAATGACTTCGCCTCCCGTATCTGGAAAGGTGTACATGGCTTCACAACTGACTGATGCATTTGCGCGt > 7:334733/1‑148 (MQ=255) tAGCCTCTGCACCTGGGTCAACTGATAAGGTGCTTTGGCCGTGACAATGCTCGTAAAGATTGCCACCAGGGCGAAGGAAGAAATGACTTCGCCTCCCGTATCTGGAAAGGTGTACATGGCTTCACAACTGACTGATGCATTTGAGCGt > 5:219744/1‑148 (MQ=255) aGCCTCTGCACCTGGGTCAACTGATAAGGTGCTTTGGCCGTGACAATGCTCGTAAAGATTGCCACCAGGGCGAAGGAAGAAATGActt < 4:150430‑M2/88‑4 (MQ=255) gCCTCTGCACCTGGGTCAACTGATAAGGTGCTTTGGCCGTGACAATGCTCGTAAAGATTGCCACCAGGGCGAAGGAAGAAATGACTTCGCCTCCCGTATCTGGAAAGGTGTACATGGCTTCACAACTGACTGAt < 2:88235/134‑1 (MQ=255) ctctGCACCTGGGTCAACTGATAAGGTGCTTTGGCCGTGACAATGCTCGTAAAGATTGCCACCAGGGCGAAGGAAGAAATGACTTCGCCTCCCGTATCTGGAAAGGTGTACATGGCTTCACAACTGACTGATGCATTTGCGCGTAAGtt > 1:264628/1‑149 (MQ=255) cACCTGGGTCAACTGATAAGGTGCTTTGGCCGTGACAATGCTCGTAAAGATTGCCACCAGGGCGAAGGAAGAAATGACTTCGCCTCCCGTATCTGGAAAGGTGTACATGGCTTCACAACTGACTGATGCATTTGCGCGTAAGTTTta < 6:101292/147‑1 (MQ=255) ccTGGGTCAACTGATAAGGTGCTTTGGCCGTGACAATGCTCGTAAAGATTGCCACCAGGGCGAAGGAAGAAATGACTTCGCCTCCCGTATCTGGAAAGGTGTACATGGCTTCACAACTGACTGATGCATTTGCGCGTAAGTTTtactac < 7:53138/149‑1 (MQ=255) tCAACTGATAAGGTGCTTTGGCCGTGACAATGCTCGTAAAGATTGCCACCAGGGCGAAGGAAGAAATGACTTCGCCTCCCGTATCTGGAAAGGTGTACATGGCTTCACAACTGACTGATGCATTTGCGCGTAAGTTTTACTACTTgcgc < 7:80527/149‑1 (MQ=255) tCAACTGATAAGGTGCTTTGGCCGTGACAATGCTCGTAAAGATTGCCACCAGGGCGAAGGAAGAAATGACTTCGCCTCCCGTATCTGGAAAGGTGTACATGGCTTCACAACTGACTGATGCATTTGCGCGTAAGTTTTACTACTTgcgc < 5:250220/149‑1 (MQ=255) tCAACTGATAAGGTGCTTTGGCCGTGACAATGCTCGTAAAGATTGCCACCAGGGCGAAGGAAGAAATGACTTCGCCTCCCGTATCTGGAAAGGTGTACATGGCTTCACAACTGACTGATGCATTTGCGCGTAAGTTTTACTACTTgcgc < 7:385985/149‑1 (MQ=255) gtaaCTGATAAGGTGCTTTGGACGTGACAATGCTCGTAAAGATTGCCACCAGGGCGAAGGAAGAAATGACTTCGCCTCCCGTATCTGGAAAGGTGTACATGGCTTCACTACTGACTGATGCATTTGCGCGTAAGTTTTACTACTTgcgc < 4:363447/147‑1 (MQ=255) cAACTGATAAGGTGCTTTGGCCGTGACAATGCTCGTAAAGATTGCCACCAGGGCGAAGGAAGAAATGACTTCGCCTCCCGTATCTGGAAAGGTGTACATGGCTTCACAACTGACTGATGCATTTGCGCGTAAGTTTTACTACTTGCGcc > 3:55656/1‑149 (MQ=255) aaCTGATAAGGTGCTTTGGCCGTGACAATGCTCGTAAAGATTGCCACCAGGGCGAAGGAAGAAATGACTTCGCCTCCCGTATCTGGAAAGGTGTACATGGCTTCACAACTGACTGATGCATTTGCGCGTAAGTTTTACTACTTGCGCCt < 7:361238/149‑1 (MQ=255) aCTGATAAGGTGCTTTGGCCGTGACAATGCTCGTAAAGATTGCCACCAGGGCGAAGGAAGAAATGACTTCGCCTCCCGTATCTGGAAAGGTGTACATGGCTTCACAACTGACTGATGCATTTGCGCGTAAGTTTTACTACTTGCGCCTg > 1:289685/1‑149 (MQ=255) cTGATAAGGTGCTTTGGCCGTGACAATGCTCGTAAAGATTGCCACCAGGGCGAAGGAAGAAATGACTTCGCCTCCCGTATCTGGAAAGGTGTACATGGCTTCACAACTGACTGATGCAt < 6:309045/119‑1 (MQ=255) cTGATAAGGTGCTTTGGCCGTGACAATGCTCGTAAAGATTGCCACCAGGGCGAAGGAAGAAATGACTTCGCCTCCCGTATCTGGAAAGGTGTACATGGCTTCACAACTGACTGATGCATTTGCGCGTAAGTTTTACTACTTGCGCCTGt > 6:254489/1‑149 (MQ=255) aTAAGGTGCTTTTGCCGTGAAAATGCTCGTAAAGAATGCCACCAGGGCGAAGGAAGAAATGACTTCGCCTCCCGTATCTGGAAAGGTGTACATGGCTTCACAACTGACTGATGCATTTGCTCGTAAGTTTTACTACTTTCGCCTGTc < 2:134692/147‑1 (MQ=255) aTAAGGTGCTTTGGCCGTGACAATGCTCGTAAAGATTGCCACCAGGGCGAAGGAAGAAATGACTTCGTCTCCCGTATCTGGAAAGGTGTACATGGCTTCACAACTGACTGATGCATTTGCGCGTAAGTTTTACTACTTGCGCCTGTCGa > 7:247605/1‑149 (MQ=255) | TTTTCCCTTATTCTGTAGCGAAATAGCACGATCATGACGCTATATACATGATTACATAGCGAAAGTGTGGATGGTAAAAATCTCATTTACACGCTAGTATCGGCATAACCACTAAACACTCTAGCCTCTGCACCTGGGTCAACTGATACGGTGCTTTGGCCGTGACAATGCTCGTAAAGATTGCCACCAGGGCGAAGGAAGAAATGACTTCGCCTCCCGTATCTGGAAAGGTGTACATGGCTTCACAACTGACTGATGCATTTGCGCGTAAGTTTTACTACTTGCGCCTGTCGATTA > NC_000913/816808‑817104 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |