New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	1124056 =	28 (0.780)	4 (0.120)	4/246	4.3	11.9%	intergenic (‑2/+62)	grxB/mdtH	glutaredoxin 2 (Grx2)/multidrug resistance efflux transporter conferring overexpression resistance to norfloxacin and enoxacin
	?	NC_000913	1124103 =	33 (0.980)					intergenic (‑49/+15)	grxB/mdtH	glutaredoxin 2 (Grx2)/multidrug resistance efflux transporter conferring overexpression resistance to norfloxacin and enoxacin
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

GTTGAGCAGAACATGTAATTCGACGGGGATATTTTTCAGGCCGAAAATCATGCGGGCTTTGAGGCAGTAAGGGCAGTGATCGTAAATGTATAGCTTCACGTGACTCCTCCATTTGGCTGTCAGTTCACTTTCAGTATGAAGGAGTCAGGGGGGAGTATCAAATCAGGCGTCGCGTTCAAGCAAACGACGCGCGGCGCGTTTCTGGCTAAACTGCCAACCCAGCGCAAGGAAAGTGAAGATGCCAATAATGCCCAGCATCATCCACGGAAGCTCTGGCTGGTGCGCCGATTTGC  >  NC_000913/1123956‑1124248                                                                                                                                                    |                                                                                                                                                  gtTGAGCAGAACATGTAATTCGACGGGGATATTTTTCAGGCCGAAAATCATGCGGGCTTTGAGGCAGTAAGGGCAGTGATCGTAAATGTATAGCTTCACGTGACTCCTCCATTTGGCTGTCAGTTCACTTTCAGTATGAAGGAGTCAgg                                                                                                                                                  <  6:2512/149‑1 (MQ=255)  ttGAGCAGAACATGTAATTCGACGGGGATATTTTTCAGGCCGAAAATCATGCGGGCTTTGAGGCAGTAAGGGCAGTGATCGTAAATGTATAGCTTCACGTGACTCCTCCATTTGGCTGTCAGTTCACTTTCAGTATGAAGGAGTCAggg                                                                                                                                                 <  2:9920/149‑1 (MQ=255)                           ggATATTTTTCAGGCCGAAAATCATGCGGGCTTTGAGGCAGTAAGGGCAGTGATCGTAAATGTATAGCTTCACGTGACTCCTCCATTTGGCTGTCAGTTCACTTTCAGTATGAAGGAGTCAGGGGGGAGTATCAAATCAGGCGTCGCGt                                                                                                                        >  2:104661/1‑149 (MQ=255)                            gATATTTTTCAGGCCGAAAATCATGCGGGCTTTGAGGCAGTAAGGGCAGTGATCGTAAATGTATAGCTTCACGTGACTCCTCCATTTGGCTGTCAGTTCACTTTCAGTATGAAGGAGTCAGGGGGGAGTATCAAATCAGGCGTCGCGtt                                                                                                                       >  5:118822/1‑149 (MQ=255)                             atatTTTTCAGGCCGAAAATCATGCGGGCTTTGAGGCAGTAAGGGCAGTGATCGTAAATGTATAGCTTCACGTGACTCCTCCATTTGGCTGTCAGTTCACTTTCAGTATGAAGGAGTCAGGGGGGAGTATCAAATCAGGCGTCGCGTTc                                                                                                                      <  1:104661/149‑1 (MQ=255)                                                                       gggCAGTGATCGTAAATGTATAGCTTCACGTGACTCCTCCATTTGGCTGTCAGTTCACTTTCAGTATGAAGGAGTCAGGGGGGAGTATCAAATCAGGCGTCGCGTTCAAGCAAACGACGCGCGGCGCGTTTCTGGCTAAACTGCCAAcc                                                                            >  6:11171/1‑149 (MQ=255)                                                                         gCAGTGATCGTAAATGTATAGCTTCACGTGACTCCTCCATTTGGCTGTCAGTTCACTTTCAGTATGAAGGAGTCAGGGGGGAGTATCAAATCAGGCGTCGCGTTCAAGCAAACGACGCGCGGCGCGTTTCTGGCTAAACTGCCaa                                                                              >  6:53004/1‑145 (MQ=255)                                                                         gCAGTGATCGTAAATGTATAGCTTCACGTGACTCCTCCATTTGGCTGTCAGTTCACTTTCAGTATGAAGGAGTCAGGGGGGAGTATCAAATCAGGCGTCGCGTTCAAGCAAACGACGCGCGGCGCGTTTCTGGCTAAACTGCCaa                                                                              <  5:53004/145‑1 (MQ=255)                                                                                           taGCTTCACGTGACTCCTCCATTTGGCTGTCAGTTCACTTTCAGTATGAAGGAGTCAGGGGGGAGTATCAAATCAGGCGTCGCGTTCAAGCAAACGACGCGCGGCGCGTTTCTGGCTaaa                                                                                     <  7:134759/120‑1 (MQ=255)                                                                                           taGCTTCACGTGACTCCTCCATTTGGCTGTCAGTTCACTTTCAGTATGAAGGAGTCAGGGGGGAGTATCAAATCAGGCGTCGCGTTCAAGCAAACGACGCGCGGCGCGTTTCTGGCTaaa                                                                                     >  8:134759/1‑120 (MQ=255)                                                                                             gCTTCACGTGACTCCTCCATTTGGCTGTCAGTTCACTTTCAGTATGAAGGAGTCAGGGGGGAGTATCAAATCAGGCGTCGCGTTCAAGCAAACGACGCGCGGCGCGTTTCTGGCTAAACTGCCAACCCAGCGCAAGGAAAGTGAAGATg                                                      >  3:35629/1‑149 (MQ=255)                                                                                                  aCGTGACTCCTCCATTTGGCTGTCAGTTCACTTTCAGTATGAAGGAGTCAGGGGGGAGTATCAAATCAGGCGTCGCGTTCAAGCAAACGACGCGCGGCGCGTTTCTGGCTAAACTGCCAACCCAGCGCAAGGAAAGTGAAGATGCCaa                                                  <  6:118822/148‑1 (MQ=255)                                                                                                    gTGACTCCTCCATTTGGCTGTCAGTTCACTTTCAGTATGAAGGAGTCAGGGGGGAGTATCAAATCAGGCGTCGCGTTCAAGCAAACGACGCGCGGCGCGTTTCTGGCTAAACTGCCAACCCAGCGCAAGGAAAGTGAAGAt                                                       <  6:119439/141‑1 (MQ=255)                                                                                                    gTGACTCCTCCATTTGGCTGTCAGTTCACTTTCAGTATGAAGGAGTCAGGGGGGAGTATCAAATCAGGCGTCGCGTTCAAGCAAACGACGCGCGGCGCGTTTCTGGCTAAACTGCCAACCCAGCGCAAGGAAAGTGAAGAt                                                       >  5:119439/1‑141 (MQ=255)                                                                                                         tcctccATTTGGCTGTCAGTTCACTTTCAGTATGAAGGAGTCAGGGGGGAGTATCAAATCAGGCGTCGCGTTCAAGCAAACGACGCGCGGCGCGTTTCTGGCTAAACTGCCAACCCAGCGCAAGGAAAGTGAAGATGCCAATAATGcc                                           >  5:46123/1‑148 (MQ=255)                                                                                                           ctccATATGGCTGTCAGTTCACTTTCAGTATGAAGGAGTCAGGGGGGAGTATCAAATCAGGCGTCGCGTTCAAGCAAACTACGCGCGGCGAGTTTCTGGCTAAACTGCCAACCCAGCGCAAGGAAAGTGAAGATGCCAATAATGCCCAg                                        >  8:104456/1‑149 (MQ=255)                                                                                                            tccATTTGGCTGTCAGTTCACTTTCAGTATGAAGGAGTCAGGGGGGAGTATCAAATCAGGCGTCGCGTTCAAGCAAACGACGCGCGGCGCGTTTCTg                                                                                           >  2:156061/1‑97 (MQ=255)                                                                                                            tccATTTGGCTGTCAGTTCACTTTCAGTATGAAGGAGTCAGGGGGGAGTATCAAATCAGGCGTCGCGTTCAAGCAAACGACGCGCGGCGCGTTTCTg                                                                                           <  1:156061/97‑1 (MQ=255)                                                                                                            tccATTTGGCTGTCAGTTCACTTTCAGTATGAAGGAGTCAGGGGGGAGTATCAAATCAGGCGTCGCGTTCAAGCAAACGACGCGCGGCGCGTTTCTGGCTAAACTGCCAACCCAGCGCAAGGAAAGTGAAGATGCCAATAATGCCCAg                                        >  8:82859/1‑148 (MQ=255)                                                                                                              cATTTGGCTGTCAGTTCACTTTCAGTATGAAGGAGTCAGGGGGGAGTATCAAATCAGGCGTCGCGTTCAAGCAAACGACGCGCGGCGCGTTGCTGGCTAAACTGCCAACCCAGCGCAAGGAAAGTGAAGATGCCAATAATGCCCAGca                                      <  5:11171/148‑1 (MQ=255)                                                                                                                tttGGCTGTCAGGTCACTTTCAGTATGAAGGAGTCAGGGGGGAGTATCAAATCAGGCGTCGCGTTCAAGCAAACGACGCGCGGCGCGTTTCTGGCTAAACTGCCAACCCAGCGCAAGGAAAGTGAAGATGCCAATAATGCCCAGcatca                                   <  7:82859/149‑1 (MQ=255)                                                                                                                  tGGCTGTCAGTTCACTTTCAGTATGAAGGAGTCAGGGGGGAGTATCAAATCAGGCGTCGCGTTCAAGCAAACGACGCGCGGCGCGTTTCTGGCTAAACTGCCAACCCAGCGCAAGGAAAGTGAAGATGCCAATAATGCCCAGcatcat                                  <  4:35629/148‑1 (MQ=255)                                                                                                                   ggCTGTCAGTTCACTTTCAGTATGAAGGAGTCAGGGGGGAGTATCAAATCAGGCGTCGCGTTCAAGCAAACGACGCGCGGCGCGTTTCTGGCTAAACTGCCAACCCAGCGCAAGGAAAGTGAAGATGCCAATAATGCCCAGCatcatc                                 >  1:184079/1‑148 (MQ=255)                                                                                                                   ggCTGGCAGTTCACTTTCATTATGAAGGAGTCAGGGGGGAGTATCAAATCAGCCCTCGCTTGCAAGCAAAAGACGCGCTGCGAGTATCTGGCTAAACTGCAAACCCAGCGCAAGGAAAGTGAAGATGCCAATAATGCCCAGCatcatc                                 <  7:107945/148‑1 (MQ=255)                                                                                                                        tCAGTTCACTTTCAGTATGAAGGAGTCAGGGGGGAGTATCAAATCAGGCGTCGCGTTCAAGCAAACGACGCGCGGCGCGTTTCTGGCTAAACTGCCAACCCAGCGCAAGGAAAGTGAAGATGCCAATAATGCCCAGCATCATCCACg                             <  2:184079/147‑1 (MQ=255)                                                                                                                          aGTTCACTTTCAGTATGAAGGAGTCAGGGGGGAGTATCAAATCAGGCGTCGCGTTCAAGCAAACGACGCGCGGCGCGTTTCTGGCTAAACTGCCAACCCAGCGCAAGGAAAGTGAAGATGCCAATAATGCCCAGCATCATCCACGGAAg                         >  1:144328/1‑149 (MQ=255)                                                                                                                           gTTCACTTTCAGTATGAAGGAGTCAGGGGGGAGTATCAAATCAGGCGTCGCGTTCAAGCAAACGACGCGCGGCGCGTTTCTGGCTAAACTGCCAACCCAGCGCAAGGAAAGTGAAGATGCCAATAATGCCCAGCATCATCCACGGAAGc                        >  1:182338/1‑149 (MQ=255)                                                                                                                                cTTTCAGTATGAAGGAGTCAGGGGGGAGTATCAAATCAGGCGTCGCGTTc                                                                                                                      <  3:34440/50‑1 (MQ=255)                                                                                                                                cTTTCAGTATGAAGGAGTCAGGGGGGAGTATCAAATCAGGCGTCGCGTTc                                                                                                                      >  4:34440/1‑50 (MQ=255)                                                                                                                                 tttCAGTATGAAGGAGTCAGGGGGGAGTATCAAATCAGGCGTCGCGTTCAAGCAAACGACGCGCGGCGCGTTTCTGGCTAAACTGCCACCCCAGCGCAAGGAAAGTGAAGATGCCAATAATGCCCAGCATCATCCACGGAAGCTctggc                  >  6:125937/1‑149 (MQ=255)                                                                                                                                 tttCAGTATGAAGGAGTCAGGGGGGAGTATCAAATCAGGCGTCGCGTTCAAGCAAACGACGCGCGGCGCGTTTCTGGCTAAACTGCCAACCCAGCGCAAGGAAAGTGAAGATGCCAATAATGCCCAGCATCATCCACGGAAGCTctggc                  >  7:64083/1‑149 (MQ=255)                                                                                                                                  agccaaaTGGAGGAGTCAGGGGGGAGTATCAAATCAGGCGTCGCGTTCAAGCAAACGACGCGCGGCGCGTTTCTGGCTAAACTGCCAACCCAGCGCAAGGAAAGTGAAGATGCCAATAATGCCCAGCATCATCCACGGAAGCTctggct                 <  5:15410/143‑1 (MQ=255)                                                                                                                                   tCAGTATGAAGGAGTCAGGGGGGAGTATCAAATCAGGCGTCGCGTTCAAGCAAACGACGCGCGGCGCGTTTCTGGCTAAACTGCCAACCCAGCGCAAGGAAAGTGAAGATGCCAATAATGCCCAGCATCATCCACGGAAGCTctggc                  <  6:46123/147‑1 (MQ=255)                                                                                                                                          gAAGGAGTCAGGGGGGAGTATCAAATCAGGCGTCGCGTTCAAGCAAACGACGCGCGGCGCGTTTCTGGCTAAACTGCCAACCCAGCGCAAGGAAAGTGAAGATGCCAATAATGCCCAGCATCATCCACGGAAGCTCTGGCTGGTGCGcc         >  2:177767/1‑149 (MQ=255)                                                                                                                                               aGTCAGGGGGGAGTATCAAATCAGGCGTCGCGTTCAAGCAAACGACGCGCGGCGCGTTTCTGGCTAAACTGCCAACCCAGCGCAAGGAAAGTGAAGATGCCAATAATGCCCAGCATCATCCACGGAAGCTCTGGCTGGTGCGCCGAttt    <  2:182338/149‑1 (MQ=255)                                                                                                                                                 tCAGGGGGGAGTATCAAATCAGGCGTCGCGTTCAAGCAAACGACGCGCGGCGCGTTTCTGGCTAAACTGCCAACCCAGCGCAAGGAAAGTGAAGATGCCAATAATGCCCAGCATCATCCACGGAAGCTCTGGCTGGTGCGCCGATTTGc  >  1:4610/1‑149 (MQ=255)                                                                                                                                                 tCAGGGGGGAGTATCAAATCAGGCGTCGCGTTCAAGCAAACGACGCGCGGCGCGTTTCTGGCTAAACTGCCAACCCAGCGCAAGGAAAGTGAAGATGCCAATAATGCCCAGCATCATCCACGGAAGCTCTGGCTGGTGCGCCGATTTGc  >  8:1367/1‑149 (MQ=255)                                                                                                                                                    |                                                                                                                                                  GTTGAGCAGAACATGTAATTCGACGGGGATATTTTTCAGGCCGAAAATCATGCGGGCTTTGAGGCAGTAAGGGCAGTGATCGTAAATGTATAGCTTCACGTGACTCCTCCATTTGGCTGTCAGTTCACTTTCAGTATGAAGGAGTCAGGGGGGAGTATCAAATCAGGCGTCGCGTTCAAGCAAACGACGCGCGGCGCGTTTCTGGCTAAACTGCCAACCCAGCGCAAGGAAAGTGAAGATGCCAATAATGCCCAGCATCATCCACGGAAGCTCTGGCTGGTGCGCCGATTTGC  >  NC_000913/1123956‑1124248

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.