New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 1208513 =55 (0.610)4 (0.050) 4/234 NT 6.9% coding (382/414 nt) tfaP e14 prophage; uncharacterized protein
?NC_000913 1208541 = 56 (0.660)coding (410/414 nt)
coding (579/603 nt)
tfaP
tfaE
e14 prophage; uncharacterized protein
e14 prophage; putative tail fiber assembly protein

GCAGGGTAAGGCTGCATTGGGAAGACTTAAAGAAGATGAGCTGAAACAATATAATTTGTGGCTGGATTATCTGGAAGCACTGGAACTGGTTGATACATCCAGTGCGCCAGATATTGAATGGCCTACGCCTCCGGCAGTTCAGGCCAGATGACATCCGGCGCGGTGCTGGTATCTGTTGCCGTCACCGCGTCAATGTAATCCAGCACAGCGTTAAGTCTGGTTGTTTCTGCCTGCGTCAGTTTACGTCCGGCCTGCAATTTCAGTTGAATCAGACTAATGGAAGCCATTG  >  NC_000913/1208395‑1208683
                                                                                                                                                  |                                                                                                                                              
gCAGGGTAAGGCTGCATTGGGAAGACTTAAAGAAGATGAGCTGAAACAATATAATTTGTGGCTGGATTATCTGGAAGCACTGGAACTGGTTGATACATCCAGTGCGCCAGATATTGAATGGCCTACGCCTCCGGCAGTTCAGGCCAGa                                                                                                                                               <  5:155694/148‑1 (MQ=255)
gCAGGGTAAGGCTGCATTGGGAAGACTTAAAGAAGATGAGCTGAAACAATATAATTTGTGGCTGGATTATCTGGAAGCACTGGAACTGGTTGATACATCCAGTGCGCCAGATATTGAATGGCCTACGCCTCCGGCAGTTCAGGCCAGa                                                                                                                                               <  7:368545/148‑1 (MQ=255)
      attgcaggccggacgtaaactgacgcaggcagaaacaaccagacttaacgctgtgctggattacattgacgcggtgacggcaacagataccagcaccgcgccggatgtcatcTGGCCTACGCCTCCGGCAGTTCAGGCCAGATGACAt                                                                                                                                         >  1:180045‑M1/113‑148 (MQ=255)
       aaGGCTGCATTGGGAAGACTTAAAGAAGATGAGCTGAAACAATATAATTTGTGGCTGGATTATCTGGAAGCACTGGAACTGGTTGATACATCCAGTGCGCCAGATATTGAATGGCCTCCGCCTCCGGCAGTTCAGTCCAGATGACATc                                                                                                                                        >  5:53558/1‑148 (MQ=255)
              cATTGGGAAGACTTAAAGAAGATGAGCTGAAACAATATAATTTGTGGCTGGATTATCTGGAAGCACTGGAACTGGTTGATACATCCAGTGCGCCAGATATTGAATGGCCTACGCCTCCGGCAGTTCAGGCCAGATGACATCCGGcgcg                                                                                                                                 <  6:37069/148‑1 (MQ=255)
                ttGGGAAGACTTAAAGAAGATGAGCTGAAACAATATAATTTGTGGCTGGATTATCTGGAAGCACTGGAACTGGTTGATACATCCAGTGCGCCAGATATTGAATGGCCTACGCCTCCGGCAGTTCAGGCCAGATGACATCCGGCGCGGt                                                                                                                               <  8:278728/148‑1 (MQ=255)
                 tGGGAAGACTTAAAGAAGATGAGCTGAAACAATATAATTTGTGGCTGGATTATCTGGAAGCACTGGAACTGGTTGATACATCCAGTGCGCCAGATATTGAATGGCCTACGCCTCCGGCAGTTCAGGCCAGATGACATCCGGCGCGGTg                                                                                                                              >  7:425034/1‑148 (MQ=255)
                 tGGGAAGACTTAAAGAAGATGAGCTGAAACAATATAATTTGTGGCTGGATTATCTGGAAGCACTGGAACTGGTTGATACATCCAGTGCGCCAGATATTGAATGGCCTACGCCTCCGGCAGTTCAGGCCAGATGACATCCGGCGCGGTg                                                                                                                              >  3:196150/1‑148 (MQ=255)
                 tGGGAAGACTTAAAGAAGATGAGCTGAAACAATATAATTTGTGGCTGGATTATCTGGAAGCACTGGAACTGGTTGATACATCCAGTGCGCCAGATATTGAATGGCCTACGCCTCCGGCAGTTCAGGCCAGATGACATCCGGCGCGGTg                                                                                                                              >  7:332417/1‑148 (MQ=255)
                                            aaCAATATAATTTGTGGCTGGATTATCTGGAAGCACTGGAACTGGTTGATACATCCAGTGCGCCAGATATTGAATGGCCTACGCCTCCGGCAGTTCAGGCCAGATGACATCCGGCGCGGTGCTGGTATCTGTTGCCGTCACCGCGTc                                                                                                    >  2:404833/1‑147 (MQ=255)
                                                 tataATTTGTGGCTGGATTATCTGGAAGCACTGGAACTGGTTGATACATCCAGTGCGCCAGATATTGAATGGCCTACGCCTCCGGCAGTTCAGGCCAGATGACATCCGGCGCGGTGCTGGTATCTGTTGCCGTCACCGCGTCAATGTa                                                                                              <  6:57053/148‑1 (MQ=255)
                                                 tataATTTGTGGCTGGATTATCTGGAAGCACTGGAACTGGTTGATACATCCAGTGCGCCAGATATTGAATGGCCTACGCCTCCGGCAGTTCAGGCCAGATGACATCCGGCGCGGTGCTGGTATCTGTTGCCGTCACCGCGTCAATGTa                                                                                              <  1:205817/148‑1 (MQ=255)
                                                  ataATTTGTGGCTGGATTATCTGGAAGCACTGGAACTGGTTGATACATCCAGTGCGCCAGATATTGAATGGCCTACGCCTCCGGCAGTTCAGGCCAGATGACATCCGGCGCGGTGCTGGTATCTGTTGCCGTCACCGCGTCAATGTaa                                                                                             >  2:4073/1‑148 (MQ=255)
                                                       ttGTGGCTGGATTATCTGGAAGCACTGGAACTGGTTGATACATCCAGTGCGCCAGATATTGAATGGCCTACGCCTCCGGCAGTTCAGGCCAGATGACATCCGGCGCGGTGCTGGTATCTGTTGCCGTCACCGCGTCAATGTAATCCAg                                                                                        >  8:427872/1‑148 (MQ=255)
                                                               ggATTATCTGGAAGCACTGGAACTGGTTGATACATCCAGTGCGCCAGATATTGAATGGCCTACTCCTCCTGCAGTTCAGGCCAGATGACATCCGGCGCGGTGCTGGTATCTGTTGCCGTCACCGCGTCAATGTAATCCAGCACAGCGt                                                                                >  2:125460/1‑148 (MQ=255)
                                                                 aTTATCTGGCAGCACTCGAACTGGTTGATACATCCAGTGCGCCAGATATTGAATGGCCTACGCCTCCGGCAGTTCAGGCCAGATGACATCCGGCGCGCTGCTGGTATCTGTTGCCGTCACCGCGTCAATGTAATCCAGCACAGCGtt                                                                               >  8:65096/1‑147 (MQ=255)
                                                                 aTTATCTGGAAGCACTGGAACTGGTTGATACATCCAGTGCGCCAGATATTGAATGGCCTACGCCTCCGGCAGTTCAGGCCAGATGACATCCGGCGCGGTGCTGGTATCTGTTGCCGTCACCGCGTCAATGTAATCCAGCACAGCGTTa                                                                              <  7:132691/148‑1 (MQ=255)
                                                                   tATCTGGAAGCACTGGAACTGGTTGATACATCCAGTGCGCCAGATATTGAATGGCCTACGCCTCCGGCAGTTCAGGCCAGATGACATCCGGCGCGGTGCTGGTATCTGTTGCCGTCACCGCGTCAATGTAATCCAGCACAGCGTTAAg                                                                            >  2:7237/1‑148 (MQ=255)
                                                                     tCTGGAAGCACTGGAACTGGTTGATACATCCAGTGCGCCAGATATTGAATGGCCTACGCCTCCGGCAGTTCAGGCCAGATGACATCCGGCGCGGTGCTGGTATCTGTTGCCGTCACCGCGTCAATGTAATCCAGCACAGCGTTAAGTc                                                                          >  2:24051/1‑148 (MQ=255)
                                                                         gAAGCACTGGAACTGGTTGATACATCCAGTGCGCCAGATATTGAATGGCCTACGCCTCCGGCAGTTCAGGCCAGATGACATCCGGCGCGGTGCTGGTATCTGTTGCCGTCACCGCGTCAATGTAATCCAGCACAGCGTTAAGTCTGgt                                                                      <  5:62729/148‑1 (MQ=255)
                                                                         gAAGCACTGGAACTGGTTGATACATCCAGTGCGCCAGATATTGAATGGCCTACGCCTCCGGCAGTTCAGGCCAGATGACATCCGGCGCGGTGCTGGTATCTGTTGCCGTCACCGCGTCAATGTAATCCAGCACAGCGTTAAGTCTGgt                                                                      <  1:7237/148‑1 (MQ=255)
                                                                         gAAGCACTGGAACTGGTTGATACATCCAGTGCGCCAGATATTGAATGGCCTACGCCTCCGGCAGGTCAGGCCAGATGACATCCGGCGCGGTGCTGGTATCTGGTGCCGTCACCGCGTCAATGTAATCCAGCACAGCGTTAAGTCt                                                                         <  2:118134/145‑1 (MQ=255)
                                                                               cTGGAACTGGTTGATACATCCAGTGCGCCAGATATTGAATGGTCTACGCCTCCGGCACTTCAGGCCAGATGACATCCGGCGCGGTGCTGCTATCTGTTGCCGTCACCGCGTCAATGTAATCCAGCACAGCGTAAAGTCTGGTTGTTTc                                                                >  3:105647/1‑148 (MQ=255)
                                                                                  gAACTGGTTGATACATCCAGTGCGCCAGATATTGAATGGCCTACGCCTCCGGCAGTTCAGGCCAGATGACATCCGGCGCGGTGCTGGTATCTGTTGCCGTCACCGCGTCAATGTAATCCAGCACAGCGTTAAGTCTg                                                                        >  8:120761/1‑137 (MQ=255)
                                                                                  gAACTGGTTGATACATCCAGTGCGCCAGATATTGAATGGCCTACGCCTCCGGCAGTTCAGGCCAGATGACATCCGGCGCGGTGCTGGTATCTGTTGCCGTCACCGCGTCAATGTAATCCAGCACAGCGTTAAGTCTg                                                                        <  7:120761/137‑1 (MQ=255)
                                                                                   aaCTGGTTGATACATCCAGTGCGCCAGATATTGAATGGCCTACGCCTCCGGCAGTTCAGGCCAGATGACATCCGGCGCGGTGCTGGTATCTGTTGCCGTCACCGCGTCAATGTAATCCAGCACAGCGTTAAGTCTGGTTGTTTctgcc                                                            >  3:208389/1‑148 (MQ=255)
                                                                                         ttGATACATCCAGTGCGCCAGATATTGAATGGCCTACGCCTCCGGCAGTTCAGGCCAGATGACATCCGGCGCGGTGCTGGTATCTGTTGCCGTCACcgcg                                                                                                      <  4:23098/100‑1 (MQ=39)
                                                                                         ttGATACATCCAGTGCGCCAGATATTGAATGGCCTACGCCTCCGGCAGTTCAGGCCAGATGACATCCGGCGCGGTGCTGGTATCTGTTGCCGTCACcgcg                                                                                                      >  3:23098/1‑100 (MQ=39)
                                                                                            ataccagcaccgcgccggatgtcatcTGGCCTACTCCTCCGGCAGTTCAGGCCAg                                                                                                                                                >  3:282474‑M1/27‑55 (MQ=255)
                                                                                            ataccagcaccgcgccggatgtcatcTGGCCTACTCCTCCGGCAGTTCAGGCCAg                                                                                                                                                <  4:282474‑M1/29‑1 (MQ=255)
                                                                                            aTACATCCAGTGCGCCAGATATTGAATGGCCTACGCCTCCGGCAGTTCAGGCCAGATGACATCCGGCGCGGTGCTGGTATCTGTTGCCGTCACCGCGTCAATGTAATCCAGCACAGCGTTAAGTCTGGTTGTTTCTGCCTGCGTCAg                                                    <  8:299573/147‑1 (MQ=255)
                                                                                              aCATCCAGTGCGCCAGATATTGAATGGCCTACGCCTCCGGCAGTTCAGGCCAGATGACATCCGGCGCGGTGCTGGTATCTGTTGCCGTCACCGCGTCAATGTAATCCAGCACAGCGTTAAGTCTGGTTGTTTCTGCCTGCGTCAGtt                                                  >  1:368628/1‑147 (MQ=255)
                                                                                               cATCCAGTGCGCCAGATATTGAATGGCCTACGCCTCCGGCAGTTCAGGCCAGATGACATCCGGCGCGGTGCTGGTATCTGTTGCCGTCACCGCGTCAATGTAATCCAGCACAGCGTTAAGTCTGGTTGTTTCTGCCTGCGTCAGTTTa                                                <  7:427872/148‑1 (MQ=255)
                                                                                               cATCCAGTGCGCCAGATATTGAATGGCCTACGCCTCCGGCAGTTCAGGCCAGATGACATCCGGCGCGGTGCTGGTATCTGTTGCCGTCACCGCGTCAATGTAATCCAGCACAGCGTTAAGTCTGGTTGTTTCTGCCTGCGTCAGTTTa                                                <  5:2077/148‑1 (MQ=255)
                                                                                                  ccAGTGCGCCAGATATTGAATGGCCTACGCCTCCGGCAGTTCAGGCCAGATGACATCCGGCGCGGTGCTGGTATCTGTTGCCGTCACCGCGTCAATGTAATCCAGCACAGCGTTAAGTCTGGTTGTTTCTGCCTGCGTCAGttt                                                 <  5:125428/144‑1 (MQ=255)
                                                                                                  ccAGTGCGCCAGATATTGAATGGCCTACGCCTCCGGCAGTTCAGGCCAGATGACATCCGGCGCGGTGCTGGTATCTGTTGCCGTCACCGCGTCAATGTAATCCAGCACAGCGTTAAGTCTGGTTGTTTCTGCCTGCGTCAGttt                                                 >  6:125428/1‑144 (MQ=255)
                                                                                                   cAGTGCGCCAGATATTGAATGGCCTACGCCTCCGGCAGTTCAGGCCAGATGACATCCGGCGCGGTGCTGGTATCTGTTGCCGTCACCGCGTCAATGTAATCCAGCACAGCGTTAAGTCTGGTTGTTTCTGCCTGCGTCAGTTTACGTc                                            <  8:332417/148‑1 (MQ=255)
                                                                                                      tGCGCCAGATATTGAATGGCCTACGCCTCCGGCAGTTCAGGCCAGATGACATCCGGCGCGGTGCTGGTATCTGTTGCCGTCACCGCGTCAATGTAATCCAGCACAGCGTTAAGTCTGGTTGTTTctgc                                                             <  7:442961/128‑1 (MQ=255)
                                                                                                      tGCGCCAGATATTGAATGGCCTACGCCTCCGGCAGTTCAGGCCAGATGACATCCGGCGCGGTGCTGGTATCTGTTGCCGTCACCGCGTCAATGTAATCCAGCACAGCGTTAAGTCTGGTTGTTTctgc                                                             >  8:442961/1‑128 (MQ=255)
                                                                                                       gcgcCAGATATTGAATGGCCTACGCCTCCGGCAGTTCAGGCCAGATGCCATCCGGCGCGGTGCTGGTATCTGTTGCCGTCACCGCGTCAATGTAATCCAGCACAGCGGTAAGTCTGGTTGTTTCTGCCTGCGTCAGTTTACGTCCGGc                                        >  5:30540/1‑148 (MQ=255)
                                                                                                        cgcCAGATATTGAATGGCCTACGCCTCCGGCAGGTCAGGCCAGATGACATCCGGCGCGGTGCTGGTATCTGTTGCCGTCACCGCGTCAATGTAATCCAGCACAGCGTTAAGTCTGGTTGTTTCTGTCTGCGTCAGTTTACGTCCGGcc                                       <  6:372844/148‑1 (MQ=255)
                                                                                                           cAGATATTGAATGGCCTACGCCTCCGGCAGTTCAGGCCAGATGACATCCGGCGCGGTGCTGGTATCTGTTGCCGTCACCGCGTCAATGTAATCCAGCACAGCGTTAAGTCTGGTTGTTTCTGCCTGCGTCAGTTTACGTCCGGCCTg                                     >  4:300343/1‑147 (MQ=255)
                                                                                                           cAGATATTGAATGGCCTACGCCTCCGGCAGTTAAGGCCAGATGACATCCGGCGCGGTGCTGGTATCTGTTGCCGTCACCGCGTCAATGTAATCCAGCACAGCGTTAAGTCTGGTTGTTTCTGACTGCGTAAGTTTCCGTCCGGCCTg                                     >  8:97730/1‑147 (MQ=255)
                                                                                                              atgtcatctggcctgaactgccggaggcgtaggccaGATGACATCCGGCGCGGTGCTGGTATCTGTTGCCGTCACCGCGTCAATGTAATCCAGCACAGCGTTAAGTCTGGTTGTTTCTGCCTGCGTCAGTTTACGTCCGGCCTGCAAt                                 >  1:180045‑M2/37‑148 (MQ=255)
                                                                                                                agtgcaTGGCCTACGCCGCCGGCAGGTCAGGCCAGAGGACAGCCGGCGCGGTGCTGGTATCTGTTGCCGTCACCGCGGCAATGTAATCCAGCACCGCGTTTAGTCTGGTTGTTTCTGCGTGCGGGAGTGTACGGCCGGCGGGCAAttt                               >  8:356483/6‑148 (MQ=17)
                                                                                                                 ttGAATGGCCTACGCCTCCGGCAGTTCAGGCCAGATGACATCCGGCGCGGTGCTGGTATCTGTTGCCGTCACCGCGTCAATGTAATCCAGCACAGCGTTAAGTCTGGTTGTTTCTGCCTGCGTCAGTTTACGTCCGGCCTGCAAttt                               >  3:131348/1‑147 (MQ=255)
                                                                                                                 ttGAATGGCCTACGCCTCCGGCAGTTCAGGCCAGATGACATCCGGCGCGGTGCTGGTATCTGTTGCCGTCACCGCGTCAATGTAATCCAGCACAGCGTTAAGTCTGGTTGTTTCTGCCTGCGTCAGTTTACGTCCGGCCTGCAATTTc                              <  4:131348/148‑1 (MQ=255)
                                                                                                                 ttGAATGGCCTACGCCTCCGGCAGTTCAGGCCAGATGACATCCGGCGCGGTGCTGGTATCTGTTGCCGTCACCGCGTCAATGTAATCCAGCACAGCGTTAAGGCTGGTTGTTTCTGCCTGCGTCAGTTTACGTCCGGCCTGCAATTTc                              <  3:331667/148‑1 (MQ=255)
                                                                                                                  tGAATGGCCTACGCCTCCGGCAGTTCAGGCCAGATGACATCCGGCGCGGTGCTGGTATCTGTTGCCGTCACCGCGTCaa                                                                                                  <  5:204940/79‑1 (MQ=34)
                                                                                                                  tGAATGGCCTACGCCTCCGGCAGTTCAGGCCAGATGACATCCGGCGCGGTGCTGGTATCTGTTGCCGTCACCGCGTCaa                                                                                                  >  6:204940/1‑79 (MQ=34)
                                                                                                                     ctggcctgaactgccggaggagtaggccaGATGACATCCGGCGCGGTGCTGGTAt                                                                                                                       >  3:282474‑M2/30‑55 (MQ=255)
                                                                                                                     ctggcctgaactgccggaggagtaggccaGATGACATCCGGCGCGGTGCTGGTAt                                                                                                                       <  4:282474‑M2/26‑1 (MQ=255)
                                                                                                                     aTGGCCTACGCCTCCGGCAGTTCAGGCCAGATGACATCCGGCGCGGTGCTGGTATCTGTTGCCGTCACCGCGTCAATGTAATCCAGCACAGCGTTAAGTCTGGTTGTTTCTGCCTGCGTCAGTTTACGTCCGGCCTGCAATTTCAGtt                          >  4:185812/1‑148 (MQ=255)
                                                                                                                           TACGCCTCCGGCAGTTCAGGCCAGATGACATCCGGCGCGGTGCTGGTATCTGTTGCCGTCACCGCGTCAATGTAATCCAGCACAGCGTTAAGTCTGGTTGTTTCTGCCTGCGTCAGTTTACGTCCGGCCTGCAATTTCAGTTGAAt                      <  6:88617‑M1/146‑1 (MQ=255)
                                                                                                                             cGCCTCCGGCAGTTCAGGCCAGATGACATCCGGCGCGTTGCTGGTATCTGTTGCCGTCACCGCGTCAATGTAATCCAGCACAGCGTTAAGTCTGGTTGTTTCTGCCTGCGTCAGTTTACGTCCGGCCTGCAATTTCAGTTGAATCAGa                  <  5:88617/148‑1 (MQ=255)
                                                                                                                             cGCCTCCGGCAGTTCAGGCCAGATGACATCCGGCGCGGTGCTGGTATCTGTTGCCGTCACCGCGTCAATGTAATCCAGCACAGCGTTAAGTCTGGTTGTTTCTGCCTGCGTCAGTTTACGTCCGGCCTGCAATTTCAGTTGAATCAg                   <  1:4073/147‑1 (MQ=255)
                                                                                                                             cGCCTCCGGCAGTTCAGGCCAGATGACATCCGGCGCGGTGCTGGTATCTGTTGCCGTCACCGCGTCAATGTAATCCAGCACAGCGTTAAGTCTGGTTGTTTCTGCCTGCGTCAGTTTACGTCCGGCCTGCAATTTCAGTTGAATCAGa                  >  8:286271/1‑148 (MQ=255)
                                                                                                                             cGCCTCCGGCAGTTCAGGCCAGATGACATCCCGCGCGGTGCTGGTATCTGTTGCCGTCACCGCGTCAATGTAATCCAGCACAGCGTTAAGTCTGGTTGTTTCTGCCTGCGTCAGTTTACGTCCGGCCTGCAATTTCAGTTGAATCAg                   <  6:53558/147‑1 (MQ=255)
                                                                                                                             aactgccggaggcgtaggccaGATGACATCCGGCGCGGTGCTGGTATCTGTTGCCGTCACCGCGTCAATGTAATCCAGCACAGCGTTAAGTCTGGTTGTTTCTGCCTGCGTCAGTTTACGTCCGGCCTGCAATTTCAGTTGAATCAg                   <  2:180045‑M2/126‑1 (MQ=255)
                                                                                                                                  ccGGCAGTTCAGGCCAGATGACATCCGGCGCGGTGCTGGTATCTGTTGCCGTCACCGCGTCAATGTAATCCAGCACAGCGTTAAGTCTGGTTGTTTCTGCCTGCGTCAGTTTACGTCCGGCCTGCAATTTCAGTTGAAt                      <  2:127594/139‑1 (MQ=255)
                                                                                                                                  ccGGCAGTTCAGGCCAGATGACATCCGGCGCGGTGCTGGTATCTGTTGCCGTCACCGCGTCAATGTAATCCAGCACAGCGTTAAGTCTGGTTGTTTCTGCCTGCGTCAGTTTACGTCCGGCCTGCAATTTCAGTTGAAt                      >  1:127594/1‑139 (MQ=255)
                                                                                                                                  ccGGCAGTTCAGGCCAGATGACATCCGGCGCGGTGCTGGTATCTGTTGCCGTCACCGCGTCAATGTAATCCAGCACAGCGTTAAGTCTGGTTGTTTCTGCCTGCGTCAGTTTACGTCCGGCCTGCAATTTCAGTTGAATCAGACTAAt             >  5:352899/1‑148 (MQ=255)
                                                                                                                                   cGGCAGTTCAGGCCAGATGACATCCGGCGCGGTGCTGGTATCTGTTGCCGTCACCGCGTCAATGTAATCCAGCACAGCGTTAAGTCTGGTTGTTTCTGCCTGCGTCAGTTTACGTCCGGCCTGCAATTTCAGTTGAATCAGACTaa              <  5:324615/146‑1 (MQ=255)
                                                                                                                                   cGGCAGTTCAGGCCAGATGACATCCGGCGCGGTGCTGGTATCTGTTGCCGTCACCGCGTCAATGTAATCCAGCACAGCGTTAAGTCTGGTTGTTTCTGCCTGCGTCAGTTTACGTCCGGCCTGCAATTTCAGTTGAATCAGACTAAt             <  4:208389/147‑1 (MQ=255)
                                                                                                                                     gCAGTTCAGGCCAGATGACATCCGGCGCGGTGCTGGTATCTGTTGCCGTCACCGCGTCAATGTAATCCAGCACAGCGTTAAGTCTGGTTGTTTCTGCCTGCGTCAGTTTACGTCCGGCCTGCAATTTCAGTTGAATCAGACTAATgg           >  3:163495/1‑147 (MQ=255)
                                                                                                                                      cAGTTCAGGCCAGATGACATCCGGCGCGGTGCTGGTATCTGTTGCCGTCACCGCGTCAATGTAATCCAGCACAGCGTTAAGTCTGGTTGTTTCTGCCTGCGTCAGTTTACGTCCGGCCTGCAATTTCAGTTTAATCAGACTAATGGaa         <  7:65096/148‑1 (MQ=255)
                                                                                                                                         ttCAGGCCAGATGACATCCGGCGCGGTGCTGGTATCTGTTGCCGTCACCGCGTCAATGTAATCCAGCACAGAGTTAAGTCTGGTTGTTTCTGCCTGCGTCAGTTTACGTCCGGCCTGCAATTTCAGTTGAATCAGACTAATGGAAGcc      <  1:170899/148‑1 (MQ=255)
                                                                                                                                           cAGGCCAGATGACATCCGGCGCGGTGCTGGTATCTGTTGCCGTCACCGCGTCAATGTAATCCAGCACAGCGTTAAGTCTGGTTGTTTCTGCCTGCGTCAGTTTACGTCCGGCCTGCAATTTCAGTTGAATCAGACTAATGGAAGCCAt    >  7:9137/1‑148 (MQ=255)
                                                                                                                                            aggccaGATGACATCCGGCGCGGTGCTGGTATCTGTTGCCGTCACCGCGTCAATGTAATCCAGCACAGCGTTAAGTCTGGTTGTTTCTGCCTGCGTCAGTTTACGTCCGGCCTGCAATTTCAGTTGAATCAGACTAATGGAAGCCAtt   <  8:400641‑M2/142‑1 (MQ=255)
                                                                                                                                            aggccaGATGACATCCGGCGCGGTGCTGGTATCTGTTGCCGTCACCGCGTCAATGTAATCCAGCACAGCGTTAAGTCTGGTTGTTTCTGCCTGCGTCAGTTTACGTCCGGCCTGCAATTTCAGTTGAATCAGACTAATGGAAGCCAt    <  2:368628‑M2/141‑1 (MQ=255)
                                                                                                                                            aggccaGATGACATCCGGCGCGGTGCTGGTATCTGTTGCCGGCACCGCGTCAATGTAATCCAGCACAGCGTTAAGTCTGGTTGTTTCTGCCTGCGTCAGTTTACGTCCGGCCTGCAATTTCAGTTGAATCAGACTAATGGAAGCCAtt   <  4:196150‑M2/142‑1 (MQ=255)
                                                                                                                                            aggccaGATGACATCCGGCGCGGGGCTGGTATCTGTTGCCGTCACCGCGTCAATGTAATCCAGCACAGCGTTAAGTCTGGTTGTTTCTGCCTGCGTCAGTTTACGTCCGGCCTGCAATTTCAGTTGAATCAGACTAATGGAAGCCAtt   <  8:425034‑M2/142‑1 (MQ=255)
                                                                                                                                             ggccaGATGACATCCGGCGCGGTGCTGGTATCTGTTGCCGTCACCGCGTCAATGTAATCCAGCACAGCGTTAAGTCTGGTTGTTTCTGCCTGCGTCAGTTTACGTCCGGCCTGCAATTTCAGTTGAATCAGACTAATGGAAGCCATTg  <  7:286271‑M2/143‑1 (MQ=255)
                                                                                                                                                  |                                                                                                                                              
GCAGGGTAAGGCTGCATTGGGAAGACTTAAAGAAGATGAGCTGAAACAATATAATTTGTGGCTGGATTATCTGGAAGCACTGGAACTGGTTGATACATCCAGTGCGCCAGATATTGAATGGCCTACGCCTCCGGCAGTTCAGGCCAGATGACATCCGGCGCGGTGCTGGTATCTGTTGCCGTCACCGCGTCAATGTAATCCAGCACAGCGTTAAGTCTGGTTGTTTCTGCCTGCGTCAGTTTACGTCCGGCCTGCAATTTCAGTTGAATCAGACTAATGGAAGCCATTG  >  NC_000913/1208395‑1208683

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.