| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 4,357,644 | T→A | 5.4% | K325I (AAA→ATA) | cadA ← | lysine decarboxylase, acid‑inducible |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 4,357,644 | 0 | T | A | 5.4% | 397.2 / 8.3 | 122 | K325I (AAA→ATA) | cadA | lysine decarboxylase, acid‑inducible |
| Reads supporting (aligned to +/- strand): ref base T (51/64); new base A (4/3); total (55/67) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 7.00e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 126 total aligned reads displayed.
GAGAGAACGCCGCCAGCAGTTTGTGAGTGGACTGGGTTTCGTAAATCACTTTCCCTTCTACACGGCCACCGCTCATACCGCATTTACCTTCGTAAATCGGTGAGAAGTTGGTGTAAGGCACCCACGCGGAGTCAAAGTGGATG‑GATTTCACATCCAGTGTTTTCTTGATGAAGTCGGTGTTGTACAGCAGACCATCATAGGTAGAGTTGGTAATTACAGCATGTACCGGCCAGGTTGCGTTTGGTGTTTCTTTCACGCGCTTAGCAATGGTAGCGTGCTGGAATTCACTCTGT > NC_000913/4357498‑4357790 | gagagaACGCCGCCAGCAGTTTGTGAGTGGACTGGGTTTCGTAAATCACTTTCCCTTCTACACGGCCACCGCTCATACCGCATTTACCTTCGTAAATCGGTGAGAAGTTGGTGTAAGGCACCCACGCGGAGTCAAAGTGGATG‑GAttt > 4:310378/1‑148 (MQ=255)gagagaACGCCGCCAGCAGTTTGTGAGTGGACTGGGTTTCGTAAATCACTTTCCCTTCTACACGGCCACCGCTCATACCGCATTTACCTTCGTAAATCGGTGAGAAGTTGGTGTAAGGCACCCACGCGGAGTCAAAGTGGATG‑GAttt > 4:39087/1‑148 (MQ=255)gagagaACGCCGCCAGCAGTTTGTGAGTGGACTGGGTTTCGTAAATCACTTTCCCTTCTACACGGCCACCGCTCATACCGCATTTACCTTCGTAAATCGGTGAGAAGTTGGTGTAAGGCACCCACGCGGAGTCAAAGTGGATG‑GAtt > 1:34758/1‑147 (MQ=255) agagaACGCCGCCAGCAGTTTGTGAGTGGACTGGGTTTCGTAAATCACTTTCCCTTCTACACGGCCACCGCTCATACCGCATTTACCTTCGTAAATCGGTGAGAAGTTGGTGTAAGGCACCCACGCGGAGTCAAAGTGGATG‑GATTTc < 4:398705/148‑1 (MQ=255) agaACGCCGCCAGCAGTTTGTGAGTGGACTGGGTTTCGTAAATCACTTTCCCTTCTACACGGCCACCGCTCATACCGCATTTACCTTCGTAAATCGGTGAGAAGTTGGTGTAAGGCACCCACGCGGAGTCAAAGTGGATG‑GATTTcac < 8:343286/148‑1 (MQ=255) agaACGCCGCCAGCAGTTTGTGAGTGGACTGGGTTTCGTAAATCACTTTCCCTTCTACACGGCCACCGCTCATACCGCATTTACCTTCGTAAATCGGTGAGAAGTTGGTGTAAGGCACCCACGCGGAGTCAAAGTGGATG‑GATTTca > 7:84105/1‑147 (MQ=255) ccgccgaCAGCAGTTGGGGAGTGGACTGGGTTTCGTAAATCACTTTCCCTTCTACACGGCCCCCGCTCATACCGCCTTTACCTTCGTAAATCGGTGAGAAGTTGGTGTAAGGCACCCACGCGGAGTCAAAGTGGATG‑GATTTCACAt < 2:91083/146‑1 (MQ=255) aCGCCGCCAGCAGTTTGTGAGTGGACTGGGTTTCGTAAATCACTTTCCCTTCTACACGGCCACCGCTCATACCGCATTTACCTTCGTAAATCGGTGAGAAGTTGGTGTAAGGCACCCACGCGGAGTCAAAGTGGATG‑GATTTCACATc > 8:250909/1‑148 (MQ=255) gccAGCAGTTTGTGAGTGGACTGGGTTTCGTAAATCACTTTCCCTTCTACACGGCCACCGCTCATACCGCATTTACCTTCGTAAATCGGTGAGAAGTTGGTGTAAGGCACCCACGCGGAGTCAAAGTGGATG‑GATTTCACCTCCAgtg < 7:133022/148‑1 (MQ=255) gTTTGTGAGTGGACTGGGTTTCGTAAATCACTTTCCCTTCTACACGGCCACCGCTCATACCGCATTTACCTTCGTAAATCGGTGAGAAGTTGGTGTAAGGCACCCACGCGGAGTCAAAGTGGATG‑GATTTCACATCCAGTGTTTTCtt < 4:88178/148‑1 (MQ=255) tttGTGAGTGGACTGGGTTTCGTAAATCACTTTCCCTTCTACACGGCCACCGCTCATACCGCATTTACCTTCGTAAATCGGTGAGAAGTTGGTGTAAGGCACCCACGCGGAGTCAAAGTGGATG‑GATTTCACATCCAGTGTTTTCtt > 1:104208/1‑147 (MQ=255) tttGTGAGTGGACTGGGTTTCGTAAATCACTTTCCCTTCTACACGGCCACCGCTCATACCGCATTTACCTTCGTAAATCGGTGAGAAGTTGGTGTAAGGCACCCACGCGGAGTCAAAGTGGATG‑GATTTCACATCCAGTGTTTTCTtg < 3:310378/148‑1 (MQ=255) tgtgAGTGGACTGGGTTTCGTAAATCACTTTCCCTTCTACACGGCCACCGCTCATACCGCATTTACCTTCGTAAATCGGTGAGAAGTTGGTGTAAGGCACCCACGCGGAGTCAAAGTGGATG‑GATTTCACATCCAGTGTTTTCTtga < 7:250909/147‑1 (MQ=255) tgtgAGTGGACTGGGTTTCGTAAATCACTTTCCCTTCTACACGGCCACCGCTCATACCGCATTTACCTTCGTAAATCGGTGAGAAGTTGGTGTAAGGCACCCACGCGGAGTCAAAGTGGATG‑GATTTCACATCCAGTGTTTTCTtga < 2:226814/147‑1 (MQ=255) gtgAGTGGACTGGGTTTCGTAAATCACTTTCCCTTCTACACGGCCACCGCTCATACCGCATTTACCTTCGTAAATCGGTGAGAAGTTGGTGTAAGGCACCCACGCGGAGTCAAAGTGGATG‑GATTTCACATCCAGTGTTTTCTtgat > 1:228789/1‑147 (MQ=255) gTGGACTGGGTTTCGTAAATCACTTTCCCTTCTACACGGCCACCGCTCATACCGCATTTACCTTCGTAAATCGGTGAGAAGTTGGTGTAAGGCACCCACGCGGAGTCAAAGTGGATG‑GATTTCACATCCAGTGTTTTCTtg < 2:115705/141‑1 (MQ=255) gTGGACTGGGTTTCGTAAATCACTTTCCCTTCTACACGGCCACCGCTCATACCGCATTTACCTTCGTAAATCGGTGAGAAGTTGGTGTAAGGCACCCACGCGGAGTCAAAGTGGATG‑GATTTCACATCCAGTGTTTTCTtg > 1:115705/1‑141 (MQ=255) gTGGACTGGGTTTCGTAAATCACTTTCCCTTCTACACGGCCACCGCTCATACCGCATTTACCTTCGTAAATCGGTGAGAAGTTGGTGTAAGGCACCCACGCGGAGTCAAAGTGGATG‑GATTTCACATCCAGTGTTTTCTTGATGAAGt < 5:28455/148‑1 (MQ=255) gACTGGGTTTCGTAAATCACTTTCCCTTCTACACGGCCACCGCTCATACCGCATTTACCTTCGTAAATCGGTGAGAAGTTGGTGTAAGGCACCCACGCGGAGTCAAAGTGGATG‑GATTTCACATCCAGTGTTTTCTTGATGAAGTCg < 8:386631/147‑1 (MQ=255) cTGGGTTTCGTAAATCACTTTCCCTTCTACACGGCCACCGCTCATACCGCATTTACCTTCGTAAATCGGTGAGAAGTTGGTGTAAGGCACCCACGCGGAGTCAAAGTGGATG‑GATTTCACATCCAGTGTTTTCTTGATGAAGTCGgtg > 1:106262/1‑148 (MQ=255) gggTTTCGTAAATCACTTTCCCTTCTACACGGCCACCGCTCATACCGCATTTACCTTCGTAAATCGGTGAGAAGTTGGTGTAAGGCACCCACGCGGAGTCAAAGTGGATG‑GATTTCACATCCAGTGTTTTCTTGATGAAGTCGGtgtt > 6:385928/1‑148 (MQ=255) tgTTTCGTAAATCACTTTCCCTTCTACACGGCCACCGCTCATACCGCATTTACCTTCGTAAATCGGTGAGAAGTTGGTGTAAGGCACCCACGCGGAGTCAAAGTGTATG‑GATTTCACATCCAGTGTTTTCTTGATGAAGTCGgtgt < 2:34758/145‑1 (MQ=255) ggTTTCGTAAATCACTTTCCCTTCTACACGGCCACCGCTCATACCGCATTTACCTTCGTAAATCGGTGAGAAGTTGGTGTAAGGCACCCACGCGGAGTCAAAGTGGATG‑GATTTCACATCCAGTGTTTTCTTGATGAAGTCGgtgt < 8:331116/146‑1 (MQ=255) tttCGTAAATCACTTTCCCTTCTACACGGCCACCGCTCATACCGCATTTACCTTCGTAAATCGGTGAGAAGTTGGTGTAAGGCACCCACGCGGAGTCAAAGTGGATG‑GATTTca > 4:286767/1‑114 (MQ=255) tttCGTAAATCACTTTCCCTTCTACACGGCCACCGCTCATACCGCATTTACCTTCGTAAATCGGTGAGAAGTTGGTGTAAGGCACCCACGCGGAGTCAAAGTGGATG‑GATTTca < 3:286767/114‑1 (MQ=255) tCGTAAATCACTTTCCCTTCTACACGGCCACCGCTCATACCGCATTTACCTTCGTAAATCGGTGAGAAGTTGGTGTAAGGCACCCACGCGGAGTCAAAGTGGATG‑GATTTCACATCCAGTGTTTTCTTGATGAAGTCGGTGTTGTa > 1:436860/1‑146 (MQ=255) tCGTAAATCACTTTCCCTTCTACACGGCCACCGCTCATACCGCATTTACCTTCGTAAATCGGTGAGAAGTTGGTGTAAGGCACCCACGCGGAGTCAAAGTGGATG‑GATTTCACATCCAGTGTTTTCTTGATGAAGTCGGTGTTGTAc < 6:324583/147‑1 (MQ=255) cGTAAATCACTTTCCCTTCTACACGGCCACCGCTCATACCGCATTTACCTTCGTAAATCGGTGAGAAGTTGGTGTAAGGCACCCACGCGGAGTCAAAGTGGATG‑GATTTCACATCCAGTGTTTTCTTGATGAAGTCGGTGTTGTAca < 2:26971/147‑1 (MQ=255) gTAAATCACTTTCCCTTCTACACGGCCACCGCTCATACCGCATTTACCTTCGTAAATCGGTGAGAAGTTGGTGTAAGGCACCCACGCGGAGTCAAAGTGGATG‑GATTTCACATCCAGTGTTTTCTTGATGAAGTCGGTGTTGTAcag < 8:148273/147‑1 (MQ=255) aaaTCACTTTCCCTTCTACACGGCCACCGCTCATACCGCATTTACCTTCGTAAATCGGTGAGAAGTTGGTGTAAGGCACCCACGCGGAGTCAAAGTGGATG‑GATTTCACATCCAGTGTTTTCTTGATGAAGTCGGTGTTGTAcag > 5:178144/1‑145 (MQ=255) aTCACTTTCCCTTCTACACGGCCACCGCTCATACCGCATTTACCTTCGTAAATCGGTGAGAAGTTGGTGTAAGGCACCCAAGCGGAGTCAAAGTGGATG‑GATTTCACATCCAGTGTTTTCTTGATGAAGTCGGTGTTGTACAGCAGAc > 7:3589/1‑148 (MQ=255) cTTTCCCTTCTACACGGCCACCGCTCATACCGCATTTACCTTCGTAAATCGGTGAGAAGTTGGTGTAAGGCACCCACGCGGAGTCAAAGTGGATG‑GATTTCACATCCAGTGTTTTCTTGATGAAGTCGGTGTTGTACAGCAGACcat > 4:320907/1‑147 (MQ=255) cccTTCTACACGGCCACCGCTCATACCGCATTTACCTTCGTAAATCGGTGAGAAGTTGGTGTAAGGCACCCACGCGGAGTCAAAGTGGATG‑GATTTCACATCCAGTGTTTTCTTGATGAAGTCGGTGTTGTACAGCAGACCATCATAg > 3:44481/1‑148 (MQ=255) tCTACACGGCCACCGCTCATACCGCATTTACCTTCGTAAATCGGTGAGAAGTTGGTGTAAGGCACCCACGCGGAGTCAAAGTGGATG‑GATTTCACATCCAGTGTTTTCTTGATGAAGTCgg < 3:297752/121‑1 (MQ=255) tCTACACGGCCACCGCTCATACCGCATTTACCTTCGTAAATCGGTGAGAAGTTGGTGTAAGGCACCCACGCGGAGTCAAAGTGGATG‑GATTTCACATCCAGTGTTTTCTTGATGAAGTCGgtgt > 8:213000/1‑124 (MQ=255) tCTACACGGCCACCGCTCATACCGCATTTACCTTCGTAAATCGGTGAGAAGTTGGTGTAAGGCACCCACGCGGAGTCAAAGTGGATG‑GATTTCACATCCAGTGTTTTCTTGATGAAGTCGgtgt < 7:213000/124‑1 (MQ=255) cTACACGGCCACCGCTCATACCGCATTTACCTTCGTAAATCGGTGAGAAGTTGGTGTAAGGCACCCACGCGGAGTCAAAGTGGATG‑GATTTCACATCCAGTGTTTTCTtgatg > 1:164656/1‑113 (MQ=255) cTACACGGCCACCGCTCATACCGCATTTACCTTCGTAAATCGGTGAGAAGTTGGTGTAAGGCACCCACGCGGAGTCAAAGTGGATG‑GATTTCACATCCAGTGTTTTCTtgatg < 2:164656/113‑1 (MQ=255) cacGGCCACCGCTCATACCGCATTTACCTTCGTAAATCGGTGAGAAGTTGGTGTAAGGCACCCACGCGGAGTCAAAGTGGATG‑GATTTCACATCCAGTGTTTTCTTGATGAAGTCGGTGTTGTACAGCAGACCATCATAGGTAGAGt < 3:39087/147‑1 (MQ=255) acGGCCACCGCTCATACCGCATTTACCTTCGTAAATCGGTGAGAAGTTGGTGTAAGGCACCCACGCGGAGTCAAAGTGGATG‑GATTTCACATCCAGTGTTTTCTTGATGAAGTCGgt > 7:356959/1‑117 (MQ=255) acGGCCACCGCTCATACCGCATTTACCTTCGTAAATCGGTGAGAAGTTGGTGTAAGGCACCCACGCGGAGTCAAAGTGGATG‑GATTTCACATCCAGTGTTTTCTTGATGAAGTCGgt < 8:356959/117‑1 (MQ=255) cGGCCACCGCTCATACCGCATTTACCTTCGTAAATCGGTGAGAAGTTGGTGTAAGGCACCCACGCGGAGTCAAAGTGGATG‑GATTTCACATCCAGTGTTTTCTTGATGAAGTCGGTGTTGTACAGCAGACCATCATAGGTAGAGTTgg < 2:228789/148‑1 (MQ=255) ggCCACCGCTCATACCGCATTTACCTTCGTAAATCGGTGAGAAGTTGGTGTAAGGCACCCACGCGGAGTCAAAGTGGATG‑GATTTCACATCCAGTGTTTTCTTGATGAAGTCGGTGTTGTAcagc > 8:87430/1‑125 (MQ=255) ggCCACCGCTCATACCGCATTTACCTTCGTAAATCGGTGAGAAGTTGGTGTAAGGCACCCACGCGGAGTCAAAGTGGATG‑GATTTCACATCCAGTGTTTTCTTGATGAAGTCGGTGTTGTAcagc < 7:93584/125‑1 (MQ=255) gCCACCGCTCATACCGCATTTACCTTCGTAAATCGGTGAGAAGTTGGTGTAAGGCACCCACGCGGAGTCAAAGTGGATG‑GATTTCACATCCAGTGTTTTCTTGATGAAGTCGGTGTTGTACAGCAGACCATCATAGGTAGAGTTGGTa < 5:385928/148‑1 (MQ=255) cGCTCATACCGCATTTACCTTCGTAAATCGGTGAGAAGTTGGTGTAAGGCACCCACGCGGAGTCAAAGTGGATG‑GATTTCACATCCAGTGTTTTCTTGATGAAGTCGGTGTTGTACAGCAGACCATCATAGGTAGAGTTGGTAATTa > 7:369860/1‑147 (MQ=255) gCTCATACCGCATTTACCTTCGTAAATCGGTGAGAAGTTGGTGTAAGGCACCCACGCGGAGTCAAAGTGGATG‑GATTTCACATCCAGTGTTTTCTTGATGAAGTCGGTGTTGTACAGCAGACCATCATAGGTaga > 8:389604/1‑135 (MQ=255) tCATACCGCATTTACCTTCGTAAATCGGTGAGAAGTTGGTGTAAGGCACCCACGCGGAGTCAAAGTGGATG‑GATTTCACATCCAGTGTTTTCTTGATGCAGTCGGTGTTGTACAGCAGACCATCATAGGTAGAGTTGGTAATTACAg > 5:6930/1‑147 (MQ=255) aCCGCATTTACCTTCGTAAATCGGTGAGAAGTTGGTGTAAGGCACCCACGCGGAGTCAAAGTGGATG‑GATTTCACATCCAGTGTTTTCTTGATGAAGTCGGTGTTGTACAGCAGACCATCATAGGTAGAGTTGGTAATTACAGCATg > 7:119263/1‑147 (MQ=255) ccGCATTTACCTTCGTAAATCGGTGAGAAGTTGGTGTAAGGCACCCACGCGGAGTCAAAGTGGATG‑GATTTCACATCCAGTGTTTTCTTGATGAAGTCGGTGTTGTACAGCAGACCATCATAGGTAGAGTTGGTAATTACAGCATGTa < 6:117201/148‑1 (MQ=255) cGCATTTACCTTCGTAAATCGGTGAGAAGTTGGTGTAAGGCACCCACGCGGAGTCAAAGTGGATG‑GATTTCACATCCAGTGTTTTCTTGATGAAGTCGGTGTTGTACAGCAGACCATCATAGGTAGAGTTGGTAATTACAGCATGTAc > 4:337009/1‑148 (MQ=255) cGCATTTACCTTCGTAAATCGGTGAGAAGTTGGTGTAAGGCACCCACGCGGAGTCAAAGTGGATG‑GATTTCACATCCAGTGTTTTCTTGATGAAGTCGGTGTTGTACAGCAGACCATCATAGGTAGAGTTGGTAATTACAGCATGTAc < 2:106262/148‑1 (MQ=255) aTTTACCTTCGTAAATCGGTGAGAAGTTGGTGTATGGCAACCACGCGGAGTCAAAGTGGATG‑GATTTCACATCCAGTGTTTTCTTGATGAAGTCGGTGTTGTACAGCAGACCATCATAGGGAGAGTTGGTAATTACAGCATGTACCgg < 4:132273/148‑1 (MQ=255) ttACCTTCGTAAATCGGTGAGAAGTTGGTGTAAGGCACCCACGCGGAGTCAAAGTGGATG‑GATTTCACATCCAGTGTTTTCTTGATGAAGTCGGTGTTGTACAGCAGACCATCATAGGTAGAGTTGGTAATTACAGCATGTACCGGc > 7:218271/1‑147 (MQ=255) ttACCTTCGTAAATCGGTGAGAAGTTGGTGTAAGGCACCCACGCGGAGTCAAAGTGGATG‑GATTTCACATCCAGTGTTTTCTTGATGAAGTCGGTGTTGTACAGCAGACCATCATAGGTAGAGTTGGTAATTACAGCATGTACCGGc > 3:363402/1‑147 (MQ=255) aactctacctatgatggtctgctgtacaacaccgacttcatcaagaaaacacTGGATGTGAAATC‑CATCCAGTGTTTTCTTGATGAAGTCGGTGTTGTACAGCAGACCATCATAGGTAGAGTTGGTAATTACAGCATGTACCGGCCAg < 4:250656‑M1/96‑1 (MQ=255) aactctacctatgatggtctgctgtacaacaccgacttcatcaagaaaacacTGGATGTGAAATC‑CATCCAGTGTTTTCTTGATGAAGTCGGTGTTGTACAGCAGACCATCATAGGTAGAGTTGGTAATTACAGCATGTACCGGCCAg < 8:276151‑M1/96‑1 (MQ=255) aactctacctatgatggtctgctgtacaacaccgacttcatcaagaaaacacTGGATGTGAAATC‑CATCCAGTGTTTTCTTGATGAAGTCGGTGTTGTACAGCAGACCATCATAGGTAGAGTTGGTAATTACAGCATGTACCGGCCAg < 8:269442‑M1/96‑1 (MQ=255) aCCTTCGTAAATCGGTGAGAAGTTGGTGTAAGGCACCCACGCGGAGTCAAAGTGGATG‑GATTTCACATCCAGTGTTTTCTTGATGAAGTCGGTGTTGTACAGCAGACCATCATAGGTAGAGTTGGTAAtt > 1:421149/1‑130 (MQ=255) aCCTTCGTAAATCGGTGAGAAGTTGGTGTAAGGCACCCACGCGGAGTCAAAGTGGATG‑GATTTCACATCCAGTGTTTTCTTGATGAAGTCGGTGTTGTACAGCAGACCATCATAGGTAGAGTTGGTAAtt < 2:421149/130‑1 (MQ=255) tCGTAAATCGGTGAGAAGTTGGTGTAAGGCACCCACGCGGAGTCAAAGTGGATG‑GATTTCACATCCAGTGTTTTCTTGATGAAGTCGGTGTTGTACAGCAGACCATCATAGGt < 6:301214/113‑1 (MQ=255) tCGTAAATCGGTGAGAAGTTGGTGTAAGGCACCCACGCGGAGTCAAAGTGGATG‑GATTTCACATCCAGTGTTTTCTTGATGAAGTCGGTGTTGTACAGCAGACCATCATAGGTAGAGTTGGTAATTACAGCATGTACCGGCCAGGTTg > 2:202431/1‑148 (MQ=255) gTAAATCGGTGAGAAGTTGGTGTAAGGCACCCACGCGGAGTCAAAGTGGATG‑GATTTCACATCCAGTGTTTTCTTGATGAAGTCGGTGTTGTACAGCAGACCATCATAGGTAGAGTTGGTAATTACAGCATGTACCGGCCAGGTTGCg > 8:295096/1‑148 (MQ=255) aaTCGGTGAGAAGTTGGTGTAAGGCACCCACGCGGAGTCAAAGTGGATG‑GATTTCACATCCAGTGTTTTCTTGATGAAGTCGGTGTTGTACAGCAGACCATCATAGGTAGAGTTGGTAATTACAGCATGTACCGGCCAGGTTGCGgtt > 7:437180/1‑148 (MQ=255) tGAGAAGTTGGTGTAAGGCACCCACGCGGAGTCAAAGTGGATG‑GATTTCACATCCAGTGTTTTCTTGATGAAGTCGGTGTTGTACAGCAGACCATCATAGGTAGAGTTGGTAATTACAGCATGTACCGGCCAGGTTGCGTTTGGTGtt < 7:295096/148‑1 (MQ=255) gtctgctgtacaacaccgacttcatcaagaaaacacTGGATGTGAAATC‑CATCCAGTGTTTTCTTGATGAAGTCGGTGTTGTACAGCAGACCATCATAGGTAGAGTTGGTAATTACAGCATGTACCGGCCAGGTTGCGTTTGGTGttt > 7:276151‑M1/37‑148 (MQ=255) gagaAGTTGGTGTAAGGCACCCACGCGGAGTCAAAGTGGATG‑GATTTCACATCCAGTGTTTTCTTGATGAAGTCGGTGTTGTACAGCAGACcatcat < 7:291418/97‑1 (MQ=255) gagaAGTTGGTGTAAGGCACCCACGCGGAGTCAAAGTGGATG‑GATTTCACATCCAGTGTTTTCTTGATGAAGTCGGTGTTGTACAGCAGACCATCATAGGTAGAGTTGGTAATTACAGCATGTACCGGCCAGGTTGCGttt > 8:85069/1‑141 (MQ=255) gagaAGTTGGTGTAAGGCACCCACGCGGAGTCAAAGTGGATG‑GATTTCACATCCAGTGTTTTCTTGATGAAGTCGGTGTTGTACAGCAGACCATCATAGGTAGAGTTGGTAATTACAGCATGTACCGGCCAGGTTGCGttt < 7:85069/141‑1 (MQ=255) agaAGTTGGTGTAAGGCACCCACGCGGAGTCAAAGTGGATG‑GATTTCACATCCAGTGTTTTCTTGATGAAGTCGGTGTTGTACAGCAGACCATCATAGGTAGAGTTGGTAATTACAGCATGTACCGGCCAGGTTGCGTTTGGTGtttc < 3:403786/148‑1 (MQ=255) aGTTGGTGTAAGGCACCCACGCGGAGTCAAAGTGGATG‑GATTTCACATCCAGTGTTTTCTTGATGAAGTCGGTGTTGTACAGCAGACCATCATAGGTAGAGTTGGTAATTACAGCATGTACCGGCCAGGTTGCGTTTGGTGtttcttt < 3:102433/148‑1 (MQ=255) ttGGTGTAAGGCACCCACGCGGAGTCAAAGTGGATG‑GATTTCACATCCAGTGTTTTCTTGATGAAGTCGGTGTTGTACAGCAGACCATCATAGGTAGAGTTGGTAATTACAGCATGTACCGGCCAGGTTGCGTTTGGTGTTTCTTTCa < 8:369860/148‑1 (MQ=255) tGGTGTAAGGCACCCACGCGGAGTCAAAGTGGATG‑GATTTCACATCCAGTGTTTTCTTGATGAAGTCGGTGTTGTACAGCAGACcatc > 3:176572/1‑88 (MQ=255) tGGTGTAAGGCACCCACGCGGAGTCAAAGTGGATG‑GATTTCACATCCAGTGTTTTCTTGATGAAGTCGGTGTTGTACAGCAGACcatc > 3:257202/1‑88 (MQ=255) tGGTGTAAGGCACCCACGCGGAGTCAAAGTGGATG‑GATTTCACATCCAGTGTTTTCTTGATGAAGTCGGTGTTGTACAGCAGACcatc < 4:257202/88‑1 (MQ=255) tGGTGTAAGGCACCCACGCGGAGTCAAAGTGGATG‑GATTTCACATCCAGTGTTTTCTTGATGAAGTCGGTGTTGTACAGCAGACCATCATAGGTAGAGTTGGTAATTACAGCATGTACCGGCCAGGTTGCGTTTGGTGTTTCTTTCAc > 6:15066/1‑148 (MQ=255) gtgtAAGGCACCCACGCGGAGTCAAAGTGGATG‑GATTTCACATCCAGTGTTTTCTTGATGAAGTCGGTGTTGTACAGCAGACCATCATAGGTAGAGTTGGTAATTACAGCATGTACCGGCCAGGTTGCGTTTGGTGTTTCTTTCAcgc > 3:280213/1‑148 (MQ=255) tAAGGCACCCACGCGGAGTCAAAGTGGATG‑GATTTCACATCCAGTGTTTTCTTGATGAAGTCGGTGTTGTACAGCAGACCATCATAGGTAGAGTTGGTAATTACAGCATGTACCGGCCAGGTTGCGTTTGGTGTTTCTTTCACgcgc < 4:280213/147‑1 (MQ=255) aaGGCACCCACGCGGAGTAAAAGTGGATG‑GATTTCACAACCACTGTTTTCATGATGAAGTCGTTGTTGTACATCAGACCATCATAGGTATAGTTGGTAATTACAGCATATACCGGACAGGTTGCGTTAGGTCATTATTTCAcgcaat > 6:401072/1‑144 (MQ=255) aGGCTCCCACGCGGAGTCAAAGGGGATG‑GATTTCACATGCAGTGTTTTCTTGATGAATTCGGTGTTGTACCGCAGACCTTCATAGGTAGAGTTGGTAATTACAGCATGTACCGGCCAGGTTGCGTTTGGTGTTTCTTTCACGCGCtt < 3:320907/147‑1 (MQ=255) aCCCACGCGGAGTCAAAGAGGCTG‑GATTTCACATCCAGTGTTTTCTTGATGAAGTCGGTGTTGTACAGCAGACCATCATAGGTAGAGTTGGTAATTACAGCATGTACCGGCCAGGTTGCGTTTGGTGTTTCTTTCACGCGCTTAGCaa < 6:93233/148‑1 (MQ=255) ccACGCGGAGTCAAAGTGGATG‑GATTTCACATCCAGTGTTTTCTTGATGAAGTCGGTGTTGTACAGCAGACCATCATAGGTAGAGTTGGTAATTACAGCATGTACCGGCCAGGTTGCGTTTGGTGTTTCTTTCACGCGCTTAGCAATg < 1:202431/148‑1 (MQ=255) ccACGCGGAGTCAAAGTGGATG‑GATTTCACATCCAGTGTTTTCTTGATGAAGTCGGTGTTGTACAGCAGACCATCATAGGTAGAGTTGGTAATTACAGCATGTACCGGCCAGGTTGCGTTTGGTGTTTCTTTCACGCGCTTAGCAATg > 4:332553/1‑148 (MQ=255) cACGCGGAGTCAAAGTGGATG‑GATTTCACATCCAGTGTTTTCTTGATGAAGTCGGTGTTGTACAGCAGACCATCATAGGTAGAGTTGGTAATTACAGCATGTACCGGCCAGGTTGCGTTTGGTGTTTCTTTCACGCGCTTAGCAATgg < 2:436860/148‑1 (MQ=255) cACGCGGAGTCAAAGTGGATG‑GATTTCACATCCAGTGTTTTCTTGATGAAGTCGGTGTTGTACAGCAGACCATCAGAGGTAGAGTTGGTAATTACAGCATGTACCGGCCAGGTTGCGTTTGGTGTTTCTTTCAGGCTCTTAGGAATgg > 2:316916/1‑148 (MQ=255) aCGCGGAGTCAACGTGGATG‑GATTTCACATCCAGTGTTTTCTTGATGAAGTCGGTGGTGTACAGCAGACCATCATAGGTAGAGTTGGTAATTACAGCATGTACCGGCCAGGTTGCGTTTGGTGTTTCTTTCACGCGCTTAGCAATGGt < 1:110348/148‑1 (MQ=255) gcgGAGTCAAAGTGGATG‑GATTTCACATCCAGTGTTTTCTtgatga > 8:287555/1‑46 (MQ=255) gcgGAGTCAAAGTGGATG‑GATTTCACATCCAGTGTTTTCTtgatga < 7:287555/46‑1 (MQ=255) cgGAGTCAAAGTGGATG‑GATTTCACATCCAGTGTTTTCTTGATGAAGTCGGTGTTGTACAGCAGACGATCATAGGTAGAGTTGGTAATTACAGCATGTACCGGCCAGGTTGCGTTTGGTGTTTCTTTCACGCGCTTAGCAATGGTAGc > 1:139660/1‑148 (MQ=255) gAGTCAAAGTGGATG‑GATTTCACATCCAGTGTTTTCTTGATGAAGTCGGTGTTGTACAGCAGACcatc < 4:397423/68‑1 (MQ=255) aGTCAAAGTGGATG‑GATTTCACATCCAGTGTTTTCTTGATGAAGTCGGTGTTGTACAGCAGACCATCATAGGTAGAGTTGGTAATTACAGCATGTACCGGCCAGGTTGCGTTTGGTGTTTCTTTCACGCGCTTAGCAATGGTAGCGTg < 8:84105/148‑1 (MQ=255) cAAAGTGGATG‑GATTTCACATCCAGTGTTTTCTTGATGAAGTCGGTGTTGTACAGCAGACcatc < 5:158775/64‑1 (MQ=255) cAAAGTGGATG‑GATTTCACATCCAGTGTTTTCTTGATGAAGTCGGTGTTGTACAGCAGACcatc > 6:158775/1‑64 (MQ=255) cAAAGTGGATG‑GATTTCACATCCAGTGTTTTCTTGATGAAGTCGGTGTTGTACAGCAGACCATCAAAGGTAGAGTTGGTAATTACAGCATGTACCGGCCAGGTTGCGTTTGGTGTTTCTTTCACGCGCTTAGCAATGGTAGCGTGCTg > 3:406950/1‑148 (MQ=255) aaGTGTATG‑GATTTGTCATCCAGTGTTTTCTTGATGAAGTCGGTGTTGTAGATCTTACAATCATAGGTTGAGTTGGTATTTACAGTATGTAACGTCCAGGTTTCGTTTGGTGTTTCTTTCACGCGCTTAGCAATGGTAGAGTGCTGGa < 2:408323/148‑1 (MQ=255) aaGTGGATG‑GATTTCACATCCAGTGTTTTCTTGATGAAGTCGGTGTTGTACAGCAGACCATCATAGGTAGAGTTGGTAATTACAGCATGTACCGGCCAGGTTGCGTTTGGTGTTTCTTTCACGCGCTTAGCAATGGTAGCGTGCTgg > 1:408323/1‑147 (MQ=255) GGATG‑GATTTCACATCCAGTGTTTTCTTGATGAAGTCGGTGTTGTACAGCAGACCATCATAGGTAGAGTTGGTAATTACAGCATGTACCGGCCAGGTTGCGTTTGGTGTTTCTTTCACGCGCTTAGCAATGGTAGCGTGCTGGAAtt < 7:415833‑M1/147‑1 (MQ=255) ATG‑GATTTCACATCCAGTGTTTTCTTGATGAAGTCGGTGTTGTACAGCAGACCATCATAGGTAGAGTTGGTAATTACAGCATGTACCGGCCAGGTTGCGTTTGGTGTTTCTTTCACGCGCTTAGCAATGGTAGCGTGCTGGAATTCAc > 5:37048‑M1/1‑148 (MQ=255) G‑GATTTCACATCCAGTGTTTTCTTGATGAAGTCGGTGTTGTACAGCAGACCATCATAGGTAGAGTTGGTAATTACAGCATGTACCGGCCAGGTTGCGTTTGGTGTTTCTTTCACGCGCTTAGCAATGGTAGCGTGCTGGAATTCActc < 8:200749‑M1/148‑1 (MQ=255) tttCACATACAGTGTTTTCTTGATGAAGTCGGTGTTGTACAGCAGACAATCATAGGTAGAGTTGGTAATTACAGCATGTACCGGCCAGGTTGCGTTTGGTGTTTCTTTCACGCGCTTAGCAATGGTAGCGTGCTGGAATTCACTCtgt > 8:51597/1‑148 (MQ=255) | GAGAGAACGCCGCCAGCAGTTTGTGAGTGGACTGGGTTTCGTAAATCACTTTCCCTTCTACACGGCCACCGCTCATACCGCATTTACCTTCGTAAATCGGTGAGAAGTTGGTGTAAGGCACCCACGCGGAGTCAAAGTGGATG‑GATTTCACATCCAGTGTTTTCTTGATGAAGTCGGTGTTGTACAGCAGACCATCATAGGTAGAGTTGGTAATTACAGCATGTACCGGCCAGGTTGCGTTTGGTGTTTCTTTCACGCGCTTAGCAATGGTAGCGTGCTGGAATTCACTCTGT > NC_000913/4357498‑4357790 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |