Predicted mutation
evidence seq id position mutation annotation gene description
JC JC NC_000913 564,107 IS2 (+) +5 bp coding (370‑374/633 nt) sfmZ ← response regulator family protein

New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 381260 =NA (NA)116 (1.060) 92/284 0.1 100% noncoding (1/1331 nt) IS2 repeat region
?NC_000913 = 564111 0 (0.000)coding (370/633 nt) sfmZ response regulator family protein
* ? NC_000913 = 382590NA (NA)111 (1.010) 72/286 0.4 100% noncoding (1331/1331 nt) IS2 repeat region
?NC_000913 564107 = 0 (0.000)coding (374/633 nt) sfmZ response regulator family protein

Only 100 of 222 total aligned reads displayed.

TTATCGGCAATTTCTTTATTAGATAATCCGCTAACCAGATAACGTAATATGGTCACTTCACGATTAGATAGCACAGTGACCGTTGAACTATTCGTACTACATTTATTGCTTTTTATATAGTTAAGCGTTTCGCTGGGAAAAAACGTGTATCCGGAGAGGATCATCTGAACGGCATGAAAAATATCATTCTGATCATTGCATTTACTGACAAAACCGTTAGCACCAGCTTGTATCGCTCTGCCAGCATAAAAGCATTCTGATTTCGATGATAAAAATAACACTTTCACTGTGCTCTG  >  NC_000913/563963‑564258
                                                                                                                                                    |                                                                                                                                                   
ttATCGGCAATTTCTTTATTAGATAATCCGCTAACCAGATAACGTAATATGGTCACTTCACGATTAGATAGCACAGTGACCGTTGAACTATTCGTACTACATTTATTGCTTTTTATATAGTTAAGCGTTTCGCTGGGAAAAAACGTGTa                                                                                                                                                     >  3:188935/1‑149 (MQ=255)
  aTCGGCAATTTCTTTATTAGATAATCCGCTAACCAGATAACGTAATATGGTCACTTCACGATTAGATAGCACAGTGACCGTTGAACTATTCGTACTACATTTATTGCTTTTTATATAGTTAAGCGTTTCGCTGGGAAAAAACGTGTa                                                                                                                                                     <  6:161035/147‑1 (MQ=255)
    cttgcagaggcgttcgagcattataacgaatggcatccgcatagtgcgctgggttatcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaGTGTATCCg                                                                                                                                                 >  5:1573‑M2/141‑149 (MQ=255)
    cttgcagaggcgttcgagcattataacgaatggcatccgcatagtgcgctgggttatcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaGTGTATCCg                                                                                                                                                 >  5:111967‑M2/141‑149 (MQ=255)
    cttgcagaggcggtcgagcattataacgactggcatccgcatagtgcgctgggttatcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaGTGTATCCg                                                                                                                                                 <  2:430117‑M2/9‑1 (MQ=255)
      gCAATTTCTTTATTAGATAATCCGCTAACCAGATAACGTAATATGGTCACTTCACGATTAGATAGCACAGTGACCGTTGAACTATTCGTACTACATTTATTGCTTTTTATATAGTTAAGCGTTTCGCTGGGAAAAAACGTGTAtagact                                                                                                                                               <  6:207557‑M2/149‑7 (MQ=255)
      gCAATTTCTTTATTAGATAATCCGCTAACCAGATAACGTAATATGGTCACTTCACGATTAGATAGCACAGTGACCGTTGAACTATTCGTACTACATTTATTGCTTTTTATATAGTTAAGCGTTTCGCTGGGAAAAAACGTGTAtagact                                                                                                                                               <  8:359388‑M2/149‑7 (MQ=255)
       gcagaggcgttcgagcattataacgaatggcatccgcatagtgcgctgggttatcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaGTGTATCCg                                                                                                                                                 >  3:294729‑M2/138‑146 (MQ=255)
          gaggcgttcgagcattataacgaatggcatccgcatagtgcgctgggttatcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaGTGTATCCGGAGAgg                                                                                                                                           <  5:174472‑M2/15‑1 (MQ=255)
                tattaGATAATCCGCTAACCAGATAACGTAATATGGTCACTTCACGATTAGATAGCACAGTGACCGTTGAACTATTCGTACTACATTTATTGCTTTTTATATAGTTAAGCGTTTCGCTGGGAAAAAACGTGTAtagactggccccc                                                                                                                                        >  8:200047‑M2/1‑133 (MQ=255)
                 attaGATAATCCGCTAACCAGATAACGTAATATGGTCACTTCACGATTAGATAGCACAGTGACCGTTGAACTATTCGTACTACATTTATTGCTTTTTATATAGTTAAGCGTTTCGCTGGGAAAAAACGTGTAtagactggccccctgaa                                                                                                                                    <  5:50852‑M2/149‑18 (MQ=255)
                  ttaGATAATCCGCTAACCAGATAACGTAATATGGTCACTTCACGATTAGATAGCACAGTGACCGTTGAACTATTCGTACTACATTTATTGCTTTTTATATAGTTAAGCTTTTCGCTGGGAAAAAACGTGTAtagactggccccctgaat                                                                                                                                   <  2:410228‑M2/149‑19 (MQ=255)
                  ttaGATAATCCGCTAACCAGATAACGTAATATGGTCACTTCACGATTAGATAGCACAGTGACCGTTGAACTATTCGTACTACATTTATTGCTTTTTATATAGTTAAGCTTTTCGCTGGGAAAAAACGTGTAtagactggccccctgaat                                                                                                                                   >  1:410228‑M2/1‑131 (MQ=255)
                  ttaGATAATCCGCTAACCAGATAACGTAATATGGTCACTTCACGATTAGATAGCACAGTGACCGTTGAACTATTCGTACTACATTTATTGCTTTTTATATAGTTAAGCGTTTCGCTGGGAAAAAACGTGTAtagactggccccctgaat                                                                                                                                   <  2:23722‑M2/149‑19 (MQ=255)
                          tCCGCTAACCAGATAACGTAATATGGTCACTTCACGATTAGATAGCACAGTGACCGTTGAACTATTCGTACTACATTTATTGCTTTTTATATAGTTAAGCGTTTCGCTGGGAAAAAACGTGTAtagactggccccctgaatctccaga                                                                                                                            <  6:341004‑M2/148‑26 (MQ=255)
                           taacgaatggcatccgcatagtgcgctgggttatcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaGTGTATCCGGAGAGGATCATCTGAACGGCAt                                                                                                                           <  8:264734‑M2/31‑1 (MQ=255)
                             gCTAACCAGATAACGTAATATGGTCACTTCACGATTAGATAGCACAGTGACCGTTGAACTATTCGTACTACATTTATTGCTTTTTATATAGTTAAGCGTTTCGCTGGGAAAAAACGTGTAtagactggccccctgaatctccagacaac                                                                                                                        >  6:376191‑M2/1‑120 (MQ=255)
                              cTAACCAGATAACGTAATATGGTCACTTCACGATTAGATAGCACAGTGACCGTTGAACTATTCGTACTACATTTATTGCTTTTTATATAGTTAAGCGTTTCGCTGGGAAAAAACGTGTAtagactggccccctgaatctccagacaacc                                                                                                                       >  2:330216‑M2/1‑119 (MQ=255)
                                 atggcatccgcatagtgcgctgggttatcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaGTGTATCCGGAGAGGATCATCTGAACGGCATGaaaaa                                                                                                                     >  4:337584‑M2/112‑148 (MQ=255)
                                 atggcatccgcatagtgcgctgggttatcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaGTGTATCCGGAGAGGATCATCTGAACGGCATGAAAAat                                                                                                                    <  4:247797‑M2/38‑1 (MQ=255)
                                  ccAGATAACGTAATATGGTCACTTCACGATTAGATAGCACAGTGACCGTTGAACTATTCGTACTACATTTATTGCTTTTTATATAGTTAAGCGTTTCGCTGGGAAAAAACGTGTAtagactggccccctgaatctccagacaaccaata                                                                                                                   <  7:100147‑M2/149‑35 (MQ=255)
                                     catccgcatagtgcgctgggttatcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaGTGTATCCGGAGAGGATCATCTGAACGGCATGAAAAATATCa                                                                                                                <  6:111967‑M2/42‑1 (MQ=255)
                                      aTAACGTAATATGGTCACTTCACGATTAGATAGCACAGTGACCGTTGAACTATTCGTACTACATTTATTGCTTTTTATATAGTTAAGCGTTTCGCTGGGAAAAAACGTGTAtagactggccccctgaatctccagtcaaccaatatcac                                                                                                               <  5:32560‑M2/149‑39 (MQ=255)
                                       tAACGTAATATGGTCACTTCACGATTAGATAGCACAGTGACCGTTGAACTATTCGTACTACATTTATTGCTTTTTATATAGTTAAGCGTTTCGCTGGGAAAAAACGTGTAtagactggccccctgaatctccagacaaccaatatcact                                                                                                              >  1:311938‑M2/1‑110 (MQ=255)
                                        aaCGTAATATGGTCACTTCACGATTAGATAGCACAGTGACCGTTGAACTATTCGTACTACATTTATTGCTTTTTATATAGTTAAGCGTTTCGCTGGGAAAAAACGTGTAtagactggccccctgaatctccagacaaccaatatcact                                                                                                              <  7:169120‑M2/148‑40 (MQ=255)
                                         aCGTAATATGGTCACTTCACGATTAGATAGCACAGTGACCGTTGAACTATTCGTACTACATTTATTGCTTTTTATATAGTTAAGCGTTTCGCTGGGAAAAAACGTGTAtagactggccccctgaatctccagacaaccaatatcactt                                                                                                             >  8:169120‑M2/1‑108 (MQ=255)
                                              agtgcgctgggttatcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaGTGTATCCGGAGAGGATCAGCTGAACGGCATGAAAAATATCATTATGATCa                                                                                                       >  3:95592‑M2/99‑149 (MQ=255)
                                                 tGTTCACTTCACGATTAGATAGCACAGTGACCGGTGAACTATTCGTACTACATTTATTGCTTTTTATATAGTTAAGCGTTTCGCTGGGAAAAAACGTGTAtagactggcccctgaatctccagacaaccaatatcacttaaataagtg                                                                                                     >  6:233300‑M2/1‑100 (MQ=255)
                                                  cgctgggttatcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaGTGTATCCGGAGAGGATCATCTGAACGGCATGAAAAATATCATTCTGATCATTGc                                                                                                   <  3:7649‑M2/55‑1 (MQ=255)
                                                  cgctgggttatcgctcgccacgggaatatctgcggcagcgggcttgtaatggggtaagtgataacagatgtctggaaatataggggcaaatccaGTGTATCCGGAGAGGATCATCTGAACGGCATGAAAAATATCATTCTGATCATTGc                                                                                                   <  5:439910‑M2/55‑1 (MQ=255)
                                                   gTCACTTCACTATTAGATATCACAGAGACCGTGTAACTATTCGTACTACATTTATTGCTTTTTATATAGTTAAGCCTGTCGCTGGGAAAAAACGTTTAtagactggccccctgaatctccagacaaccaatatcacttaaataagtga                                                                                                   >  3:12437‑M2/1‑98 (MQ=255)
                                                       ggttatcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaGTGTATCCGGAGAGGATCATCTGAACGGCATGAAAAATATCATTCTGATCATTGCATTTa                                                                                              <  7:234459‑M2/60‑1 (MQ=255)
                                                        ttCACGATTAGATAGCACAGTGACCGTTGAACTATTCGTACTACATTTATTGCTTTTTATATAGTTAAGCGTTTCGCTGGGAAAAAACGTGTAtagactggccccctgaatctccagacaaccaatatcacttaaa                                                                                                          <  6:427166‑M2/136‑44 (MQ=255)
                                                         ttatcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatattggggcaaatccaGTGTATCCGGAGAGGATCATCTGAACGGCATGAAAAATATCATTCTGATCATTGCATTTacc                                                                                            <  1:200007‑M2/62‑2 (MQ=255)
                                                          cACGATTAGATAGCACAGTGACCGTTGAACTATTCGTACTACATTTATTGCTTTTTATATAGTTAAGCGTTTCGCTGGGAAAAAACGTGTAtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtctt                                                                                            >  8:452805‑M2/1‑91 (MQ=255)
                                                           atcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaGTGTATCCGGAGAGGATCATCTGAACGGCATGAAAAATATCATTCTGATCATTGCATTTACTGa                                                                                          >  4:218375‑M2/86‑149 (MQ=255)
                                                             gATTAGATAGCACAGTGACCGTTGAACTATTCGTACTACATTTATTGCTTTTTATATAGTTAAGCGTTTCGCTGGGAAAAAACGTGTAtagactggccccctgaatctacagacaaacaatatcacttaaataagtgatagtcttaata                                                                                        <  7:462728‑M2/149‑62 (MQ=255)
                                                              gctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaGTGTATCCGGAGAGGATCATCTGAACGGCATGAAAAATATCATTCTGATCATTGCATTTACTGACaa                                                                                       <  4:360554‑M2/67‑1 (MQ=255)
                                                                 aGATAGCACAGTGACCGTTGAACTATTCGTACTACATTAATTGCTTTTTATATAGTTAAGCGTTTCGCTGGGAAAAAACGTGTAtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatacta                                                                                     >  8:218333‑M2/1‑84 (MQ=255)
                                                                     acgggaatatctgcggcagcgggcttgtaattggttaagtgataacagatgtctggaaatatagtggcaaatacaGTGTATCCGGAGAGGATCATCTGAACTGCATGAAAAATATCATTCTGATCATTGCATTTACTGACAAAACCGtt                                                                                <  4:123448‑M2/74‑1 (MQ=255)
                                                                      gCACAGTGACCGTTGAACTATTCGTACTACATTTATTGCTTTTTATATAGTTAAGCGTTTCGCTGGGAAAAAACGTGTAtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagttttt                                                                               >  6:249303‑M2/1‑79 (MQ=255)
                                                                      cgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaGTGTATCCGGAGAGGATCATCTGAACGGCATGAAAAATATCATTCTGATCATTGCATTTACTGACAAAACCGtt                                                                                >  7:30383‑M2/75‑148 (MQ=255)
                                                                      cgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaGTGTATCCGGAGAGGATCATCTGAACGGCATGAAAAATATCATTCTGATCATTGCATTTACTGACAAAACCGt                                                                                 >  1:112389‑M2/75‑147 (MQ=255)
                                                                       cacaGTGACCGTTGAACTATTCGTACTACATTTATTGCTTTTTATATAGTTAAGCGTTTCGCTGGGAAAAAACGTGTAtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagttttta                                                                              >  7:359388‑M2/1‑78 (MQ=255)
                                                                       cacaGTGACCGTTGAACTATTCGTACTACATTTATTGCTTTTTATATAGTTAAGCGTTTCGCTGGGAAAAAACGTGTAtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagttttta                                                                              >  3:341272‑M2/1‑78 (MQ=255)
                                                                       cacaGTGACCGTTGAACTATTCGTACTACATTTATTGCTTTTTATATAGTTAAGCGTTTCGCTGGGAAAAAACGTGTAtagactggcccccagaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagttttta                                                                              >  2:101091‑M2/1‑78 (MQ=255)
                                                                        ggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaGTGTATCCGGAGAGGATCATCTGAACGGCATGAAAAATATCATTCTGATCATTGCATTTACTGACAAAACCGTTAg                                                                              >  8:295330‑M2/73‑148 (MQ=255)
                                                                         gaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaGTGTATCCGGAGAGGATCATCTGAACGGCATGAAAAATATCATTCTGATCATTGCATTTACTGACAAAACCGTTAGCa                                                                            <  3:168691‑M2/78‑1 (MQ=255)
                                                                            tGACCGTTGAACTATTCGTACTACATTTATTGCTTTTTATATAGTTAAGCGTTTCGCTGGGAAAAAACGTGTAtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagacta                                                                         >  1:460564‑M2/1‑73 (MQ=255)
                                                                              aCCGTTGAACTATTCGTACTACATTTATTGCTTTTTATATAGTTAAGCGTTTCGCTGGGAAAAAACGTGTAtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagactagt                                                                       >  7:447867‑M2/1‑71 (MQ=255)
                                                                               ctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaGTGTATCCGGAGAGGATCATCTGAACGGCATGAAAAATATCATTCTGATAATTGCATTTACTGACAAAACCGTTAGCACCCGCt                                                                      >  2:388531‑M2/66‑149 (MQ=255)
                                                                                 gTTGAACTATTCGTACTACATTTATTGCTTTTTATATAGTTAAGCGTTTCGCTGGGAAAAAACGTGTAtaga                                                                                                                                                 <  4:358128‑M2/72‑5 (MQ=255)
                                                                                 gTTGAACTATTCGTACTACATTTATTGCTTTTTATATAGTTAAGCGTTTCGCTGGGAAAAAACGTGTAtaga                                                                                                                                                 >  3:358128‑M2/1‑68 (MQ=255)
                                                                                    gAACTATTCGTACTACATTTATTGCTTTTTATATAGTTAAGCGTTTCGCTTGGAAAAAACTTTTAtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagactagtcattg                                                                  >  3:324335‑M2/1‑65 (MQ=255)
                                                                                    gAACTATTCGTACTACATTTATTGCTTTTTATATAGTTAAGCGTTTCGCTGGGAAAAAACGTGTAtagactggccccctgaatctccagtcaaccaatatcacttaaataagtgatagtcttaatactagtttttagactagtcattg                                                                  >  6:32560‑M2/1‑65 (MQ=255)
                                                                                    gAACTATTCGTACTACATTTATTGCTTTTTATATAGTTAAGCGTTTCGCTGGGAAAAAACGTGTAtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagactagtcattg                                                                  <  5:78877‑M2/148‑84 (MQ=255)
                                                                                    gAACTATTCGTACTACATTTATTGCTTTTTATATAGTTAAGCGTTTCGCTGGGAAAAAACGTGTAtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagactagtcattg                                                                  >  1:246299‑M2/1‑65 (MQ=255)
                                                                                     cagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaGTGTATCCGGAGAGGATCATCTGAACGGCATGAAAAATATCATTCTGATCATTGCATTTACTGACAAAACCGTTAGCACCAGCTTGTATc                                                                <  1:339197‑M2/90‑1 (MQ=255)
                                                                                     cagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaGTGTATCCGGAGAGGATCATCTGAACGGCATGAAAAATATCATACTGATCATTGCATTTACTGACAAAACCGTTAGCACCAGCTTGTATc                                                                >  1:323284‑M2/60‑149 (MQ=255)
                                                                                     cagcgggcttgtaatggggtaagtgataacagatgtctggaaatataggggcaaatccaGTGTATCCGGAGAGGATCATCTGAACGGCATGAAAAATATCATTCTGATCATTGCATTTACTGACAAAACCGTTAGCACCAGCTTGTATc                                                                <  3:405628‑M2/90‑1 (MQ=255)
                                                                                     aaCTATTCGTACTACATTTATTGCTTTTTATATAGTTAAGCGTTTCGCTGGGAAAAAACGTGTAtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagactagtcattgga                                                                >  4:188935‑M2/1‑64 (MQ=255)
                                                                                             gTACTACATTTATTGCTTTTTATATAGTTAAGCGTTTCGCTGGGAAAAAACGTGTAtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaa                                                                                          >  4:50139‑M2/1‑56 (MQ=255)
                                                                                                taatgggttaagtgataacagatgtctggaaatataggggcaaatccaGTGTATCCGGAGAGGATCATCTGAACGGCATGAAAAATATCATTCTGATCATTGCATTTACTGACAAAACCGTTAGCACCAGCTTGTATCGCTCTGCCAg                                                      >  6:288223‑M2/49‑148 (MQ=255)
                                                                                                ctacATTTATTGCTTTTTATATAGTTAAGCGTTTCGCTGGGAAAAAACGTGTAtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagactagtcattggagaacagatga                                                      >  5:341004‑M2/1‑53 (MQ=255)
                                                                                                 tacATTTATTGCTTTTTATATAGTTAAGCGTTTCGCTGGGAAAAAACGTGTAtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagactagtcattggagaacagatgatt                                                    <  1:39313‑M2/149‑98 (MQ=255)
                                                                                                  atgggttaagtgataacagatgtctggaaatataggggcaaatccaGTGTATCCGGAGAGGATCATCTGAACGGCATGAAAAATATCATTCTGATCATTGCATTTACTGACAAAACCGTTAGCACCAGCTTGTATCGCTCTGCCAGCa                                                    >  4:403442‑M2/47‑148 (MQ=255)
                                                                                                  atgggttaagtgataacagatgtctggaaatataggggcaaatccaGTGTATCCGGAGAGGATCATCTGAACGGCATGAAAAATATCATTCTGATCATTGCATTTACTGACAAAACCGTTAGCACCAGCTTGTATCGCTCTGCCAGCa                                                    >  3:46550‑M2/47‑148 (MQ=255)
                                                                                                     tttATTGCTTTTTATATAGTTAAGCGTTTCGCTGGGAAAAAACGTGTAtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagactagtcattggagaac                                                            <  5:186633‑M2/137‑90 (MQ=255)
                                                                                                     tttATTGCTTTTTATATAGTTAAGCGTTTCGCTGGGAAAAAACGTGTAtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagactagtcattggagaac                                                            >  6:186633‑M2/1‑48 (MQ=255)
                                                                                                      gttaagtgataacagatgtctggaaatataggggcaaatccaGTGTATCCGGAGAGGATCATCTGAACGGCATGAAAAATATCATTCTGATCATTGCATTTACTGACAAAACCGTTAGCACCAGCTTGTATCGCTCTGCCAGCATaaaa                                               <  2:381268‑M2/107‑1 (MQ=255)
                                                                                                           gCTTTTTATATAGTTAAGCGTTTCGCTGGGAAAAAACGTGTAtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagactagtcattggagaacagatgattgatgtctta                                           >  7:21042‑M2/1‑42 (MQ=255)
                                                                                                             tttttATATAGTTAAGCGTTTCGCTGGGAAAAAACGTGTAtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagactagtcattggagaacagatgattgatgtcttaggg                                        <  1:17400‑M2/149‑110 (MQ=255)
                                                                                                             gataacagatgtctggaaatataggggcaaatccaGTGTATCCGGAGAGGATCATCTGAACGGCATGAAAAATATCATTCTGATCATTGCATTTACTGa                                                                                          <  4:427655‑M2/64‑1 (MQ=255)
                                                                                                               tttATATAGTTAAGCGTTTCGCTGGGAAAAAACGTGTAtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagactagtcattggagaacagatgattgatgtcttaggg                                        >  3:241702‑M2/1‑38 (MQ=255)
                                                                                                                 tatataGTTAAGCGTTTCGCTGGGAAAAAACGTGTAtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagactagtcattggagaacagatgattgatgtcttagggccg                                     <  8:414864‑M2/148‑113 (MQ=255)
                                                                                                                   agatgtctggaaatataggggcaaatccaGTGTATCCGGAGAGTATCATCTGAAAGGCAAGAAAAATATCAATCTGATCATTGCATATACTGACAAAACCGATAGCAACAGCTTGTATAGCTCTGCCAGACTAAACGCATactgaatac                                  >  4:239470‑M2/30‑145 (MQ=255)
                                                                                                                       gTTAAGCGTTTCGCTGGGAAAAAACGTGTAtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagactagtcattggagaacagatgattgatgtcttagggccggagaaac                              >  2:259011‑M2/1‑30 (MQ=255)
                                                                                                                        ttAAGCGTTTCGCTGGGAAAAAACGTGTAtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagagtagtcattggagaacagatgattgatgtcttagggccggagaaacg                             <  4:85406‑M2/149‑121 (MQ=255)
                                                                                                                        tctggaaatataggggcaaatccaGTGTATCCGGAGAGGATCATCTGAACTGCATGAAAAATATCATTCTGATCTATGCATTTACTGACAAAGCCGTTAGCACCAGCTTGTATCGCTCTGCCAGCATAAAAGAATTCTGATTTcgatgt                             >  5:420282‑M2/25‑148 (MQ=255)
                                                                                                                         ctggaaatataggggcaaatccaGTGTATCCGGAGAGGATCATCTGAACGGCATGAAAAATATCATTCTGATCATTGCATTTACTGACAAAACCGTTAGCACCAGCTTGTATCGCTCTGCCAGCATAAAAGCATTCTGATTTCgatga                             >  5:248031‑M2/24‑148 (MQ=255)
                                                                                                                           ggaaatataggggcaaatccaGTGTATCCGGAGAGGATCATCTGAACGGCATGAAAAATATCATTCTGATCATTGCATTTACTGACAAAACCGTTAGCACCAGCTTGTATCGCTCTGCCAGCATAAAAGCATTCTGATTTCGATGATa                           >  6:377840‑M2/22‑148 (MQ=255)
                                                                                                                            gaaatataggggcaaatccaGTGTATCCGGAGAGGATCATCTGAACGGCATGAAAAATATCATTCTGATCAtt                                                                                                     >  1:125083‑M2/21‑73 (MQ=255)
                                                                                                                            gaaatataggggcaaatccaGTGTATCCGGAGAGGATCATCTGAACGGCATGAAAAATATCATTCTGATCATTGCATTTACTGACAAAACCGTTAGCACCAGCTTGTATCGCTCTGCCAGCATAAAAGCATTCTGATTTCGATGATaaa                         <  2:195168‑M2/129‑1 (MQ=255)
                                                                                                                             cGTTTCGCTGGGAAAAAACGTGTAtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtct                                                                                             <  1:408866‑M2/80‑57 (MQ=255)
                                                                                                                             cGTTTCGCTGGGAAAAAACGTGTAtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtct                                                                                             >  2:408866‑M2/1‑24 (MQ=255)
                                                                                                                              aatataggggcaaatccaGTGTATCCGGAGAGGATCATATGAACGGCATGAAAAATATCATTCTGATCATTGCATTTACTGACAAAACCGTTAGCACCAGCTTGTATCGCTCTGCCAGCATAAAAGCATTCTGATTTCGATGATaaaaa                       >  2:291298‑M2/19‑149 (MQ=255)
                                                                                                                                  ctctgTGAAATAACGTGTAtagtctggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagactagtcattggagaacagatgatttatgtcttagggccggagaaacgcagacggcg                    >  5:218462‑M2/3‑19 (MQ=255)
                                                                                                                                     gggcaaatccaGTGTATCCGGAGAGGATCATCTGAACGGCATGAAAAATATCATTCTGATCATTGCATTTACTGACAAAACCGTTAGCACCAGCtt                                                                     <  7:40542‑M2/85‑1 (MQ=255)
                                                                                                                                     gggcaaatccaGTGTATCCGGAGAGGATCATCTGAACGGCATGAAAAATATCATTCTGATCATTGCATTTACTGACAAAACCGTTAGCACCAGCtt                                                                     >  8:40542‑M2/12‑96 (MQ=255)
                                                                                                                                       gcaaatccaGTGTATCCGGAGAGGATCATCTGAACGGCATGAAAAATATCATTCTGATCATTGCATTTACTGACAAAACCGTTAGCACCAGCTTGTATCGCTCTGCCAGCATAAAGCATTGGGCTTTAGGTGAtaaaaataaaccgttg             >  1:14883‑M2/10‑142 (MQ=255)
                                                                                                                                           atccaGTGTATCCGGAGAGGATCATCTGAACGGCATGAAAAATATCATTCTGATCATTGCATTTACTGACAAAACCGTTAGCACCAGCTTGTATCGCTCTGCCAGCATAAAAGCATTCTGATTTCGATGATAAAAATAACACTTTCACt          <  2:150835‑M2/144‑1 (MQ=255)
                                                                                                                                           aaaaCGTGTAtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagactagtcattggagaacagatgattgatgtcttagggccggagaaacgcagacggcgtaccacacag          <  2:457582‑M2/149‑140 (MQ=255)
                                                                                                                                             aaCGTGTAtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagactagtcattggagaacagatgattgatgtcttagggccggagaaacgcagacggcgtaccacacagg         <  7:368314‑M2/148‑141 (MQ=255)
                                                                                                                                              aCATGTAtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagactagtcattggagaacagatgattgatgtcttagggccggagaaacgcagacggcgtaccacacagga        <  1:351794‑M2/148‑142 (MQ=255)
                                                                                                                                                  gtAtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagactagtcattggagaacagatgattgatgtcttagggccggagaaacgcagacggcgtaccacacaggaa       <  2:118895‑M2/145‑143 (MQ=255)
                                                                                                                                                  gtAtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagactagtcattggagaacagatgattgatgtcttagggccggagaaacgcagacggcgtaccacacaggaa       <  1:452443‑M2/145‑143 (MQ=255)
                                                                                                                                                   tatagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttatagactagtcattggagaacagatgattgatgtcttagggacggagaaacgcagacggcgtaccacacaggataagat  <  5:269672‑M2/149‑148 (MQ=255)
                                                                                                                                                   tATCCGGAGAGGATCATCTGAACGGCATGAAAAATATCATTCTGATCATTGCATTTACTGACAAAACCGTTAGCACCAGCTTGTATCGCTCTGCCAGCATAAAAGCATTCTGATTTCGATGATAAAAATAACACTTTCACTGTGctct   <  5:377840/148‑1 (MQ=255)
                                                                                                                                                   tATCCGGAGAGGATCATCTGAACGGCATGAAAAATATCATTCTGATCATTGCATTTACTGACAAAACCGTTAGCACCAGCTTGTATCGCTCTGCCAGCATAAAAGCATTCTGATTTCGATGATAAAAATAACACTTTCACTGTGCTCTg  >  4:349799/1‑149 (MQ=255)
                                                                                                                                                   tATCCGGAGAGGATCATCTGAACGGCATGAAAAATATCATTCTGATCATTGCATTTACTGACAAAACCGTTAGCACCAGCTTGTATCGCTCTGCCAGCATAAAAGCATTCTGATTTCGATGATAAAAATAACACTTTCACTGTGCTCTg  >  4:290025/1‑149 (MQ=255)
                                                                                                                                                    |                                                                                                                                                   
TTATCGGCAATTTCTTTATTAGATAATCCGCTAACCAGATAACGTAATATGGTCACTTCACGATTAGATAGCACAGTGACCGTTGAACTATTCGTACTACATTTATTGCTTTTTATATAGTTAAGCGTTTCGCTGGGAAAAAACGTGTATCCGGAGAGGATCATCTGAACGGCATGAAAAATATCATTCTGATCATTGCATTTACTGACAAAACCGTTAGCACCAGCTTGTATCGCTCTGCCAGCATAAAAGCATTCTGATTTCGATGATAAAAATAACACTTTCACTGTGCTCTG  >  NC_000913/563963‑564258

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.