New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 3948426 =142 (1.290)6 (0.060) 6/268 8.2 4.3% intergenic (+2/+23) yifE/yifB UPF0438 family protein/magnesium chelatase family protein and putative transcriptional regulator
?NC_000913 3948449 = 132 (1.280)coding (1521/1521 nt) yifB magnesium chelatase family protein and putative transcriptional regulator
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

Only 100 of 139 total aligned reads displayed.

AGAAGCAGAACGCGTGTGGTCCAAGTATATGACGCGTATTAAGCGTCCAAAACGTTTTCACACCCTTTCCGGCGGTAAACCGCAGGTTGAAGGTGCTGAAGACTACACCGATTCTGACGATTAATAAAAAGGGCGAAATGCCCTTTTTTTATGTCAGTAGTTTCTGCAGATGGATGAGCAAACGGTCAATCGCTCGATAGCTAACTGCCTCCTGCAAATGCTGACGTGTGATAATGTCAGACTGATCAATATCAGCAATGGTTCGTGCAACTTTCAATAACCGCTGCCAGGCA  >  NC_000913/3948301‑3948593
                                                                                                                                                    |                                                                                                                                                
aGAAGCAGAACGCGTGTGGTCCAAGTATATGACGCGTATTAAGCGTCCAAAACGTTTTCCCACCCTTTCCGGCGGTAAACCGCAGGTTGAAGGTGCTGAAGACTACACCGATTCTGACGATTAATAAAAAGGGCGAAATGCCCtttttt                                                                                                                                                  >  7:341348/1‑149 (MQ=255)
aGAAGCAGAACGCGTGTGGTCCAAGTATATGACGCGTATTAAGCGTCCAAAACGTTTTCACACCCTTTCCGGCGGTAAACCGCAGGTTGAAGGTGCTGAAGACTACACCGATTCTGACGATTAATAAAAAGGGCGAAATGCCCtttttt                                                                                                                                                  >  1:41122/1‑149 (MQ=255)
  aaGCAGAACGCGTGTGGTCCAAGTATATGACGCGTATTAAGCGTCCAAAACGTTTTCACACCCTTTCCGGCGGTAAACCGCAGGTTGAAGGTGCTGAAGACTACACCGATTCTGACGATTAATAAAAAGGGCGAAATGCCCTTTTTTTa                                                                                                                                                >  7:405645/1‑149 (MQ=255)
    gCAGAACGCGTGTGGTCCAAGTATATGACGCGTATTAAGCGTCCAAAACGTTTTCACACCCTTTCCGGCGGTAAACCGCAGGTTGAAGGTGCTGAAGACTACACCGATTCTGACGATTAATAAAAAGGGCGAAATGCCCTTTTTTTATg                                                                                                                                              >  5:400543/1‑149 (MQ=255)
     cAGAACGCGTGTGGTCCAAGTATATGACGCGTATTAAGCGTCCAAAACGTTTTCACACCCTTTCCGGCGGTAAACCGCAGGTTGAAGGTGCTGAAGACTACACCGATTCTGACGATTAATAAAAAGGGCGAAATGCCCTTTTTTTATGt                                                                                                                                             >  6:259585/1‑149 (MQ=255)
     cAGAACGCGTGTGGTCCAAGTATATGACGCGTATTAAGCGTCCAAAACGTTTTCACACCCTTTCCGGCGGTAAACCGCAGGTTGAAGGTGCTGAAGACTACACCGATTCTGACGATTAATAAAAAGGGCGAAATGCCCTTTTTTTATGt                                                                                                                                             <  8:343612/149‑1 (MQ=255)
        aaCGCGTGTGGTCCAAGTATATGACGCGTATTAAGCGTCCAAAACGTTTTCACACCCTTTCCGGCGGTAAACCGCAGGTTGAAGGTGCTGAAGACTACACCGATTCTGACGATTAATAAAAAGGGCGAAATGCCCTTTTTTTATGTCag                                                                                                                                          >  8:232922/1‑149 (MQ=255)
        aaCGCGTGTGGTCCAAGTATATGACGCGTATTAAGCGTCCAAAACGTTTTCACACCCTTTCCGGCGGTAAACCGCAGGTTGAAGGTGCTGAAGACTACACCGATTCTGACGATTAATAAAAAGGGCGAAATGCCCTTTTTTTATGTCag                                                                                                                                          >  2:340321/1‑149 (MQ=255)
          cgcgTGTGGTCCAAGTATATGACGCGTATTAAGCGTCCAAAACGTTTTCACACCCTTTCCGGCGGTAAACCGCAGGTTGAAGGTGCTGAAGACTACACCGATTCTGACGATTAATAAAAAGGGCGAAATGCCCTTTTTTTATGTCagta                                                                                                                                        <  4:413123/149‑1 (MQ=255)
             gtgtGGTCCAAGTATATGACGCGTATTAAGCGTCCAAAACGTTTTCACCCCCTTTCCGGCGGTAACCCGCAGGTTGATGGTGCTGAAGACTACACCGATTCTGACGATTAATAAAAAGGGCGAACTGCCCTTTTTTTATGTCAGTAGtt                                                                                                                                     >  5:318568/1‑149 (MQ=255)
             gtgtGGTCCAAGTATATGACGCGTATTAAGCGTCCAAAACGTTTTCACACCCTTTCCGGCGGTAAACCGCAGGTTGAAGGTGCTGAAGACTACACCGATTCTGACGATTAATAAAAAGGGCGAATTGCCCTTTTTTTATGTCAGTAGtt                                                                                                                                     >  5:195959/1‑149 (MQ=255)
               gtgGTCCAAGTATATGACGCGTATTAAGCGTCCAAAACGTTTTCACACCCTTTCCGGCGGTAAACCGCAGGTTGAAGGTGCTGAAGACTACACCGATTCTGACGATTAATAAAAAGGGCGAAATGCCCTTTTTTTATGTCAGTAGTTTc                                                                                                                                   <  2:453422/149‑1 (MQ=255)
                  gTCCAAGTATATGACGCGTATTAAGCGTCCAAAACGTTTTCACCCCCTTTCCGGCGGTAAACCGCAGGTTGAAGGTGCTGAAGACTACACCGATTCTGACGATTAATAAAAGGGGCGAAATGCCCTTTTTTTATGTCAGTAGTTTCTg                                                                                                                                 >  2:467197/1‑148 (MQ=255)
                  gTCCAAGTATATGACGCGTATTAAGCGTCCAAAACGTTTTCACACCCTTTCCGGCGGTAAACCGCAGGTTGAAGGTGCTGAAGACTACACCGATTCTGACGATTAATAAAAAGGGCGAAATGCCCTTTTTTTATGTCAGTAGTTTCTg                                                                                                                                 >  7:208384/1‑148 (MQ=255)
                   tCCAAGTATATGACGCGTATTAAGCGTCCAAAACGTTTTCACACCCTTTCCGGCGGTAAACCGCAGGTTGAAGGTGCTGAAGACTACACCGATTCTGACGATTAATAAAAAGGGCGAAATGCCCTTTTTTTATGTCAGTAGTTTCTg                                                                                                                                 >  3:57161/1‑147 (MQ=255)
                      aaGTATATGACGCGTATTAAGCGTCCAAAACGTTTTCACACCCTTTCCGGCGGTAAACCGCAGGTTGAAGGTGCTGAAGACTACACCGATTCTGACGATTAATAAAAAGGGCGAAATGCCCTTTTTTTATGTCAGTAGTTTCTGCAgat                                                                                                                            <  1:373978/149‑1 (MQ=255)
                      aaGTATATGACGCGTATTAAGCGTCCAAAACGTTTTCACACCCTTTCCGGCGGTAAACCGCAGGTTGAAGGTGCTGAAGACTACACCGATTCTGACGATTAATAAAAAGGGCGAAATGCCCTTTTTTTATGTCAGTAGTTTCTGCAgat                                                                                                                            <  3:219926/149‑1 (MQ=255)
                      aaGTATATGACGCGTATTAAGCGTCCAAAACGTTTTCACACCCTTTCCGGCGGTAAACCGCAGGTTGAAGGTGCTGAAGACTACACCGATTCTGACGATTAATAAAAAGGGCGAAATGCCCTTTTTTTATGTCAGTAGTTTCTGCAgat                                                                                                                            >  5:347024/1‑149 (MQ=255)
                        gTATATGACGCGTATTAAGCGTCCAAAACGTTTTCACACCCTTTCCGGCGGTAAACCGCAGGTTGAAGGTGCTGAAGACTACACCGATTCTGACGATTAATAAAAAGGGCGAAATGCCCTTTTTTTATGTCAGTAGTTTCTGCAgatg                                                                                                                           >  2:165838/1‑148 (MQ=255)
                           tatGACGCGTATTAAGCGTCCAAAACGTTTTCACACCCTTTCCGTCGGTAAACCGCAGGTTGAAGGTGCTGAAGAATACACCGATTCTGTAGATTAATAAAAAGGGCGAAATGCCATTTTTTTATGTCAGTAGTTTCTg                                                                                                                                 <  1:64461/139‑1 (MQ=255)
                           tatGACGCGTATTAAGCGTCCAAAACGTTTTCACACCCTTTCCGGCGGTAAACCGCAGGTTGAAGGTGCTGAAGACTACACCGATTCTGACGATTAATAAAAAGGGCGAAATGCCCTTTTTTTATGTCAGTAGTTTCTGCAgatggat                                                                                                                        <  4:57161/148‑1 (MQ=255)
                           tatGACGCGTATTAAGCGTCCAAAACGTTTTCACACCCTTTCCGGCGGTAAACCGCAGGTTGAAGGTGCTGAAGACTACACCGATTCTGACGATTAATAAAAAGGGCGAAATGCCCTTTTTTTATGTCAGTAGTTTCTGCAgatggat                                                                                                                        >  7:47328/1‑148 (MQ=255)
                           tatGACGCGTATTAAGCGTCCAAAACGTTTTCACACCCTTTCCGGCGGTAAACCGCAGGTTGAAGGTGCTGAAGACTACACCGATTCTGACGATTAATAAAAAGGGCGAAATGCCCTTTTTTTATGTCAGTAGTTTCTGCAgatggat                                                                                                                        <  3:45985/148‑1 (MQ=255)
                           tatGACGCGTATTAAGCGTCCAAAACGTTTTCACACCCTTTCCGGCGGTAAACCGCAGGTTGAAGGTGCTGAAGACTACACCGATTCTGACGATTAATAAAAAGGGAGAAATGCCCTTTTTTTATGTCAGTAGTTTCTg                                                                                                                                 >  2:64461/1‑139 (MQ=255)
                             tGACGCGTATTAAGCGTCCAAAACGTTTTCACACCCTTTCCGGCTGTAAACCGCAGGTTGAAGGTGCTGAAGACTACACCGATTCTGACGATTAATAAAAAGGGCGAAATGCACTTTTTTTATGTCAGTAGTTTCTGCAGATGGTTGa                                                                                                                      <  6:15142/148‑1 (MQ=255)
                             tGACGCGTATTAAGCGTCCAAAACGTTTTCACACCCTTTCCGGCGGTAAACCGCAGGTTGAAGGTGCTGAAGACTACACCGATTCTGACGATTAATAAAAAGGGCGAAATGCCCTTTTTTTATGTCAGTAGTTTCTGCAGATGGATGa                                                                                                                      <  4:303154/148‑1 (MQ=255)
                             tGACGCGTATTAAGCGTCCAAAACGTTTTCACACCCTTTCCGGCGGTAAACCGCAGGTTGAAGGTGCTGAAGACTACACCGATTCTGACGATTAATAAAAAGGGCGAAATGCCCTTTTTTTATGTCAGTAGTTTCTGCAGATGGATGa                                                                                                                      <  1:407385/148‑1 (MQ=255)
                             tGACGCGTATTAAGCGTCCAAAACGTTTTCACACCCTTTCCGGCGGTAAACCGCAGGTTGAAGGTGCTGAAGACTACACCGATTCTGACGATTAATAAAAAGGGCGAAATGCCCTTTTTTTATGTCAGTAGTTTCTGCAGATGGATGAg                                                                                                                     >  3:89094/1‑149 (MQ=255)
                              gACGCGTATTAAGCGTCCAAAACGTTTTCACACCCTTTCCGGCGGTAAACCGCAGGTTGAAGGTGCTGAAGACTACACCGATTCTGACGATTAATAAAAAGGGCGAAATGCCCTTTTTTTATGTCAGTAGTTTCTGCAGATGGATGAg                                                                                                                     <  6:106556/148‑1 (MQ=255)
                              gACGCGTATTAAGCGTCCAAAACGTTTTCACACCCTTTCCGGCGGTAAACCGCAGGTTGAAGGTGCTGAAGACTACACCGATTCTGACGATTAATAAAAAGGGCGAAATGCCCTTTTTTTATGTCAGTAGTTTCTGCAGATGGATGAg                                                                                                                     >  5:106556/1‑148 (MQ=255)
                               aCGCGTATTAAGCGTCCAAAACGTTTTCACACCCTTTCCGGCGGTAAACCGCAGGTTGAAGGTGCTGAAGACTACACCGATTCTGACGATTAATAAAAAGGGCGAAATGCCCTTTTTTTATGTCAGTAGTTTCTGCAGATGGATGAGc                                                                                                                    <  3:14538/148‑1 (MQ=255)
                               aCGCGTATTAAGCGTCCAAAACGTTTTCACACCCTTTCCGGCGGTAAACCGCAGGTTGAAGGTGCTGAAGACTACACCGATTCTGACGATTAATAAAAAGGGCGAAATGCCCTTTTTTTATGTCAGTAGTTTCTGCAGATGGATGAGCa                                                                                                                   <  5:301091/149‑1 (MQ=255)
                                      ttAAGCGTCCAAAACGTTTTCACACCCTTTCCGGCGGTAAACCGCAGGTTGAAGGTGCTGAAGACTACACCGATTCTGACGATTAATAAAAAGGGCGAAATGCCCTTTTTTTATGTCAGTAGTTTCTGCAGATGGATGAGCAAACGGt                                                                                                             <  8:208384/148‑1 (MQ=255)
                                            gTCCAAAACGTTTTCACCCCCTTTCCGGCGGTAAACCGCAGGTTGAAGGTGCTGAAGACTACACCGATTCTGACGATTAATAAAAAGGGCGAAATGCCCTTTTTTTATGTCAGTAGTTTCTGCAGATGGATGAGCAAACGGTCAATCGc                                                                                                      >  1:166752/1‑149 (MQ=255)
                                             tCCAAAACGTTTTCACACCCTTTCCGGCGGTAAACCGCAGGTTGAAGGTGCTGAAGACTACACCGATTCTGACGATTAATAAAAAGGGCGAAATGCCCTTTTTTTATGTCAGTAGTTTCTGCAGATGGATGAGCAAACGGTCAATCGCt                                                                                                     <  7:232922/149‑1 (MQ=255)
                                             tCCAAAACGTTTTCACACCCTTTCCGGCGGTAAACCGCAGGTTGAAGGTGCTGAAGACTACACCGATTCTGACGATTAATAAAAAGGGCGAAATGCCCTTTTTTTATGTCAGTAGTTTCTGCAGATGGATGAGCAAACGGTCAATCGCt                                                                                                     <  1:340321/149‑1 (MQ=255)
                                              ccAAAACGTTTTCACACCCTTTCCGGCGGTAAACCGCAGGTTGAAGGTGCTGAAGACTACACCGATTCTGACGATTAATAAAAAGGGCGAAATGCCCTTTTTTTATGTCAGTAGTTTCTGCAGATGGATGAGCAAACGGTCAATCGCTc                                                                                                    <  6:453052/149‑1 (MQ=255)
                                                aaaaCGTTTTCACACCCTTTCCGGCGGTAAACCGCAGGTTGAAGGTGCTGAAGACTACACCGATTCTGACGATTAATAAAAAGGGCGAAATGCCCTTTTTTTATGTCAGTAGTTTCTGCAGATGGATGAGCAAACGGTCAATCGCTCGa                                                                                                  >  7:12602/1‑149 (MQ=255)
                                                aaaaCGTTTTCACACCCTTTCCGGCGGTAAACCGCAGGTTGAAGGTGCTGAAGACTACACCGATTCTGACGATTAATAAAAAGGGCGAAATGCCCTTTTTTTATGTCAGTAGTTTCTGCAGATGGATGAGCAAACGGTCAATCGCTCGa                                                                                                  >  7:324474/1‑149 (MQ=255)
                                                  aaCGTTTTCACACCCTTTCCGGCGGTAAACCGCAGGTTGAAGGTGCTGAAGACTACACCGATTCTGACGATTAATAAAAAGGGCGAAATGCCCTTTTTTTATGTCAGTAGTTTCTGCAGATGGATGAGCAAACGGTCAATCGCTCGa                                                                                                  >  7:400109/1‑147 (MQ=255)
                                                     gTTTTCACACCCTTTCCGGCGGTAAACCGCAGGTTGAAGGTGCTGAAGACTACACCGATTCTGACGATTAATAAAAAGGGCGAAATGCCCTTTTTTTATGTCAGTAGTTTCTGCAGATGGATGAGCAAACGGt                                                                                                             <  7:163962/133‑1 (MQ=255)
                                                     gTTTTCACACCCTTTCCGGCGGTAAACCGCAGGTTGAAGGTGCTGAAGACTACACCGATTCTGACGATTAATAAAAAGGGCGAAATGCCCTTTTTTTATGTCAGTAGTTTCTGCAGATGGATGAGCAAACGGTCAATCGCTCGATAGc                                                                                              >  4:143982/1‑148 (MQ=255)
                                                     gTTTTCACACCCTTTCCGGCGGTAAACCGCAGGTTGAAGGTGCTGAAGACTACACCGATTCTGACGATTAATAAAAAGGGCGAAATGCCCTTTTTTTATGTCAGTAGTTTCTGCAGATGGATGAGCAAACGGTCAATCGCTCGATAGCt                                                                                             <  8:405645/149‑1 (MQ=255)
                                                     acgttttcacCCTTTCCGGCGGTAAACCGCAGGTTGAAGGTGCTGAAGACTACACCGATTCTGACGATTAATAAAAAGGGCGAAATGCCCTTTTTTTATGTCAGTAGTTTCTGCAGATGGATGAGCAAACGGTCAATCGCTCGATAGCt                                                                                             <  7:9380/142‑1 (MQ=255)
                                                           acacCCTTTCCGGCGGTAAACCGCAGGTTGAAGGTGCTGAAGACTACACCGATTCTGACGATTAATAAAAAGGGCGAAATGCCCTTTTTTTa                                                                                                                                                >  8:261900/1‑92 (MQ=255)
                                                           acacCCTTTCCGGCGGTAAACCGCAGGTTGAAGGTGCTGAAGACTACACCGATTCTGACGATTAATAAAAAGGGCGAAATGCCCTTTTTTTATGTCAGTAGTTTCTGCAgatggat                                                                                                                        >  5:66651/1‑116 (MQ=255)
                                                           acacCCTTTCCGGCGGTAAACCGCAGGTTGAAGGTGCTGAAGACTACACCGATTCTGACGATTAATAAAAAGGGCGAAATGCCCTTTTTTTATGTCAGTAGTTTCTGCAGATGGATGAGCAAACGGTCAATCGCTCGATAGCTAACTGc                                                                                       <  2:374436/149‑1 (MQ=255)
                                                             acCCTTTCCGGCGGTAAACCGCAGGTTGAAGGTGCTGAAGACTACACCGATTCTGATGATTAATAAAAAGGGCGAAATGCCCTTTTTTTATGTCAGTAGTTTCTGCAGATGGATGAGCAAACGGTCAATCGCTCGATAGCTAACTGcct                                                                                     >  4:198575/1‑149 (MQ=255)
                                                              cccTTTCCGGCGGTAAACCGCAGGTTGAAGGTGCTGAAGACTACACCGATTCTGACGATTAATAAAAAGGGCGAAATGCCCTTTTTTTATGTCAGTAGTTTCTGCAGATGGATGAGCAAACGGTCAATCGCTCGATAGCTAACTGcctc                                                                                    <  4:280189/149‑1 (MQ=255)
                                                               ccTTTCCGGCGGTAAACCGCAGGTTGAAGGTGCTGAAGACTACACCGATTCTGACGATTAATAAAAAGGGCGAAATGCCCTTTTTTTATGTCAGAAGTTTATGCAGATGGTGGAGAAAACGGTCAATCGCTGGATAGCTAActccctcc                                                                                   >  4:319439/1‑149 (MQ=255)
                                                                         ggTAAACCGCAGGTTGAAGGTGCTGAAGACTACACCGATTCTGACGATTAATAAAAAGGGCGAAATGCCCTTTTTTTATGTCAGTAGTTTCTGCAGATGGATGAGCAAACGGTCAATCGCTCGATAGCTAACTGCCTCCTGCAAATGCt                                                                         <  8:311579/149‑1 (MQ=255)
                                                                           tAAACCGCAGGTTGAAGGTGCTGAAGACTACACCGATTCTGACGATTAATAAAAAGGGCGAAATGCCCTTTTTTTATGTCAGTAGTTTCTGCAGATGGATGAGCAAACGGTCAATCGCTCGATAGCTAACTGCCTCCTGCAAATGCTGa                                                                       >  6:12029/1‑149 (MQ=255)
                                                                             aaCCGCAGGTTGAAGGTGCTGAAGACTACACCGATTCTGACGATTAATAAAAAGGGCGAAATGCCCTTTTTTTATGTCAGTAGTTTCTGCAGATGGATGAGCAAACGGTCAATCGCTCGATAGCTAACTGCCTCCTGCAAATGCTGAc                                                                      <  6:277243/148‑1 (MQ=255)
                                                                              aCCGCAGGTTGAAGGTGCTGAAGACTACACCGATTCTGACGATTAATAAAAAGGGCGAAATGCCCTTTTTTTATGTCAGTAGTTTCTGCAGATGGATGAGCAAACGGTCAATCGCTCGATAGCTAACTGCCTCCTGCAAATGCTGACgt                                                                    >  5:128441/1‑149 (MQ=255)
                                                                              aCCGCAGGTTGAAGGTGCTGAAGACTACACCGATTCTGACGATTAATAAAAAGGGCGAAATGCCCTTTTTTTATGTCAGTAGTTTCTGCAGATGGATGAGCAAACGGTCAATCGCTCGATAGCTAACTGCCTCCTGCAAATGCTGACgt                                                                    <  3:143982/149‑1 (MQ=255)
                                                                               ccGCAGGTTGAAGGTGCTGAAGACTACACCGATTCTGACGATTAATAAAAAGGGCGAAATGCCCTTTTTTTATGTCAGTAGTTTCTGCAGATGGATGAGCAAACGGTCAATCGCTCGATAGCTAACTGCCTCCTGCAAATGCTGACgtg                                                                   <  8:12602/149‑1 (MQ=255)
                                                                                cGCAGGTTGAAGGTGCTGAAGACTACACCGATTCTGACGATTAATAAAAAGGGCGAAATGCCCTTTTTTTATGTCAGTAGTTTCTGCAGATGGATGAGCAAACGGTCAATCGCTCGATAGCTAACTGCCTCCTGCAAATGCTGACgtgt                                                                  >  4:165040/1‑149 (MQ=255)
                                                                                     gTTGAAGGTGCTGAAGACTACACCGATTCTGACGATTAATAAAAAGGGCGAAATGCCCTTTTTTTATGTCAGTAGTTTCTGCAGATGGATGAGCAAACGGTCAATCGCTCGATAGCTAACTGCCTCCTGCAAATGCTGACGTGTGATaa                                                             >  2:254886/1‑149 (MQ=255)
                                                                                      ttGAAGGTGCTGAAGACTACACCGATTCTGACGATTAATAAAAAGGGCGAAATGCCCTTTTTTTATGTCAGTAGTTTCTGCAGATGGATGAGCAAACGGTCAATCGCTCGATAGCTAACTGCCTCCTGCAAATGCTGACGTGTGATAAt                                                            <  6:400543/149‑1 (MQ=255)
                                                                                        gAAGGTGCTGAAGACTACACCGATTCTGACGATTAATAAAAAGGGCGAAATGCCCTTTTTTTATGTCAGTAGTTTCTGCAGATGGATGAGCAAACGGTCAATCGCTCGATAGCTAACTGCCTCCTGCAAATGCTGACGTGTGATAATGt                                                          >  2:63612/1‑149 (MQ=255)
                                                                                        gAAGGGGCGGAAGACTACACCGATTCTGACGATTAATAAAAAGGGCGAAATGCCCTTTTTTTATGTCAGTAGTTTCTGCAGATGGATGAGCAAACGGTCAATCGCTCGATAGCTAACTGCCTCCTGCAAATGCTGACGTGTGATAATg                                                           <  2:171531/148‑1 (MQ=255)
                                                                                         aaGGTGCTGAAGACTACACCGATTCTGACGATTAATAAAAAGGGCGAAATGCCCTTTTTTTATGTCAGTAGTTTCTGCAGATGGATGAGCAAACGGTCAATCGCTCGATAGCTAACTGCCTCCTGCAAATGCTGACGTGTGATAATGt                                                          <  2:86255/148‑1 (MQ=255)
                                                                                         aaGGTGCTGAAGACTACACCGATTCTGACGATTAATAAAAAGGGCGAAATGCCCTTTTTTTATGTCAGTAGTTTCTGCAGATGGATGAGCAAACGGTCAATCGCTCGATAGCTAACTGCCTCCTGCAAATGCTGACGTGTGATAATGTc                                                         <  8:324474/149‑1 (MQ=255)
                                                                                             tGCTGAAGACTACACCGATTCTGACGATTAATAAAAAGGGCGAAATGCCCTTTTTTTATGTCAGTAGTTTCTGCAGATGGATGAGCAAACGGTCAATCGCTCGATAGCTAACTGCCTCCTGCAAATGCTGACGTGTGATAATGTCAGAc                                                     <  7:449569/149‑1 (MQ=255)
                                                                                                 gAAGACTACACCGATTCTGACGATTAATAAAAAGGGCGAAATGCCCTTTTTTTATGTCAGTAGTTTCTGCAGATGGATGAGCAAACGGTCAATCGCTCGATAGCTAACTGCCTCCTGCAAATGCTGACGTGTGATAATGTCAGACTGAt                                                 >  6:281494/1‑149 (MQ=255)
                                                                                                  aaGACTACACCGATTCTGACGATTAATAAAAAGGGCGAAATGCCCTTTTTTTATGTCAGTAGTTTCTGCAGATGGATGAGCAAACGGTCAATCGCTCGATAGCTAACTGCCTCCTGCAAATGCTGACGTGTGATAATGTCAGACTGAt                                                 >  8:183710/1‑148 (MQ=255)
                                                                                                  aaGACTACACCGATTCTGACGATTAATAAAAAGGGCGAAATGCCCTTTTTTTATGTCAGTAGTTTCTGCAGATGGATGAGCAAACGGTCAATCGCTCGATAGCTAACTGCCTCCTGCAAATGCTGACGTGTGATAATGTCAGACTGAt                                                 <  7:357937/148‑1 (MQ=255)
                                                                                                  aaGACTACACCGATTCTGACGATTAATAAAAAGGGCGAAATGCCCTTTTTTTATGTCAGTAGTTTCTGCAGATGGATGAGCAAACGGTCAATCGCTCGATAGCTAACTGCCTCCTGCAAATGCTGACGTGTGATAATGTCAGACTGATc                                                <  1:5580/149‑1 (MQ=255)
                                                                                                    gACTACACCGATTCTGACGATTAATAAAAAGGGCGAAATGCCCTTTTTTTATGTCAGTAGTTTc                                                                                                                                   <  1:194964/64‑1 (MQ=255)
                                                                                                    gACTACACCGATTCTGACGATTAATAAAAAGGGCGAAATGCCCTTTTTTTATGTCAGTAGTTTc                                                                                                                                   >  2:194964/1‑64 (MQ=255)
                                                                                                      cTACACCGATTCTGACGATTAATAAAACGGGCGAAATGCCCTTTTTTTATGTCAGTAGTTTCTGCAGATGGATGAGCAAACGGTCAATCGCTCGATAGCTAACTGCCTCCTGCAAATGCTGACGGGTGATAATGTCAGACTGAGCAata                                            <  1:329045/149‑1 (MQ=255)
                                                                                                       tACACCGATTCTGACGATTAATAAAAAGGGCGAAATGCCCTTTTTTTATGTCAGTAGTTTCTGCAGATGGATGAGCAAACGGTCAATCGCTCGATAGCTACCTGCCTCCTGCAAATGCTGACGTGTGATAATGTCAGACTGATCAatat                                           >  5:118817/1‑149 (MQ=255)
                                                                                                         cacCGATTCTGACGATTAATAAAAAGGGCGAAATGCCCTTTTTTTATGTCAGTAGTTTCTGCAGATGGATGAGCAAACGGTCAATCGCTCGATAGCTAACTGCCTCCTGCAAATGCTGACGTGTGATAATGTCAGACTGATCAATATCa                                         <  8:178499/149‑1 (MQ=255)
                                                                                                         cacCGATTCTGACGATTAATAAAAAGGGCGAAATGCCCTTTTTTTATGTAATTAGTTAATCAATATGAATAAGAAAACGGACAATCAATAAAAAGAAAAATGCCTCATGAAAATGATGACTTGTGATAATGTAAGAATGAACAATAGCa                                         >  2:25744/1‑149 (MQ=255)
                                                                                                          acCGATTCTGACGATTAATAAAAAGGGCGAAATGCCCTTTTTTTATGTCAGTAGTTTCTGCAGATGGATGAGCAAACGGTCAATCGCTCGATa                                                                                                <  5:219343/93‑1 (MQ=255)
                                                                                                          acCGATTCTGACGATTAATAAAAAGGGCGAAATGCCCTTTTTTTATGTCAGTAGTTTCTGCAGATGGATGAGCAAACGGTCAATCGCTCGATa                                                                                                >  6:219343/1‑93 (MQ=255)
                                                                                                          acCGATTCTGACGATTAATAAAAAGGGCGAAATGCCCTTTTTTTATGTCAGTAGTTTCTGCAGATGGATGAGCAAACGGTCAATCGCTCGATAGCTAACTGCCTCCTGCAAATGCTGACGTGTGATAATGTCAGACTGATCAATATCAg                                        >  3:293072/1‑149 (MQ=255)
                                                                                                          acCGATTCTGACGATTAATAAAAAGGGCGAAATGCCCTTTTTTTATGTCAGTAGTTTCTGCAGATGGATGAGCAAACGGTCAATCGCTCGATAGCTAACTGCCTCCTGCAAATGCTGACGTGTGATAATGTCAGACTGATCAATATCAg                                        >  5:86051/1‑149 (MQ=255)
                                                                                                          acCGATTCTGACGATTAATAAAAAGGGCGAAATGCCCTTTTTTTATGTCAGTAGTTTCTGCAGATGGATGAGCAAACGGTCAATCGCTCGATAGCTAACTGCCTCCTGCAAATGCTGACGTGTGATAATGTCAGACTGATCAATATCAg                                        >  7:415956/1‑149 (MQ=255)
                                                                                                             gATTCTGACGATTAATAAAAAGGGCGAAATGCCCTTTTTTTATGTCAGTAGTTTCTGCAGATGGATGAGCAAACGGTCAATCGCTCGATAGCTAACTGCCTCCTGCAAATGCTGACGTGTGATAATGTCAGACTGATCAATATCAGCaa                                     >  7:431013/1‑149 (MQ=255)
                                                                                                                  tGACGATTAATAAAAAGGGCGAAATGCGCTTTTTTTATGTCAGTAGTTTCTGCAGATGGATGAGCAAACGGTCAATCGCTCGATAGCTAACTGCCTCCTGCAAATGCTGACGTGTGATAATGTCAGACTGATCAATATCAGCAATGGtt                                >  1:66994/1‑149 (MQ=255)
                                                                                                                   gACGATTAATAAAAAGGGCCAAATGCCCTTTTTTTATCTCAGTAGTTTCTGCAGATGGATGAGCAAACGGTCAATCGCACGATAGCTAACTGCCTCCTCCAAATGCTGACGTGTGATAAAGTCAGACTGATCAATAACAGCAATGTTTc                               >  2:397394/1‑149 (MQ=255)
                                                                                                                    aCGATTAATAAAAAGGGCGAAATGCCCTTTTTTTATGTCAGTAGTTTCTGCAGATGGATGAGCAAACGGTCAATCGCTCGATAGCTAACTGCCTCCTGCAAATGCTGACGTGTGATAATGTCAGACTGATCAATATCAGCAATGGTTc                               <  8:400109/148‑1 (MQ=255)
                                                                                                                     cGATTAATAAAAAGGGCGAAATGCCCTTTTTTTATGTCAGTAGTTTCTGCAGATGGATGAGCAAACGGTCAATCGCTCGATAGCTAACTGCCTCCTGCAAATGCTGACGTGTGATAATGTCAGACTGATCAATATCAGCAATGGTTCGt                             <  3:284865/149‑1 (MQ=255)
                                                                                                                     cGATTAATAAAAAGGGCGAAATGCCCTTTTTTTATGTCAGTAGTTTCTGCAGATGGATGAGCAAACGGTCAATCGCTCGATAGCTAACTGCCTCCTGCAAATGCTGACGTGTGATAATGTCAGACTGATCAATATCAGCAATGGTTCGt                             <  4:293072/149‑1 (MQ=255)
                                                                                                                       aTTAATAAAAAGGGCGAAATGCCCTTTTTTTATGTCAGTAGTTTCTGCAGATGGATGAGCAAACGGTCAATCGCTCGATAGCTAACTGCCTCCTGCAAATGCTGACGTGTGATAATGTCAGACTGATCAATATCAg                                        <  7:394769/136‑1 (MQ=255)
                                                                                                                       aTTAATAAAAAGGGCGAAATGCCCTTTTTTTATGTCAGTAGTTTCTGCAGATGGATGAGCAAACGGTCAATCGCTCGATAGCTAACTGCCTCCTGCAAATGCTGACGTGTGATAATGTCAGACTGATCAATATCAg                                        >  8:394769/1‑136 (MQ=255)
                                                                                                                          aataaAAAGGGCGAAATGCCCTTTTTTTATGTCAGTAGTTTCTGCAGATGGATGAGCAAACGGTCAATCGCTCGATAGCTAACTGCCTCCTGCAAATGCTGACGTGTGATAATGTCAGACTGATCAATATCAGCAATGGTTCGTGCAAc                        >  4:251531/1‑149 (MQ=255)
                                                                                                                              aaaaGGGCGAAATGCCCTTTTTTTATGTCAGTAGTTTCTGCAGATGGATGAGCAAACGGTCAATCGCTCGATAGCTAACTGCCTCCTGCAAATGCTGACGTGTGATAATGTCAGACTGATCAATATCAGCAATGGTTCGTGCAACttt                     <  1:165838/148‑1 (MQ=255)
                                                                                                                              aaaaGGGCGAAATGCCCTTTTTTTATGTCAGTAGTTTCTGCAGATGGATGAGCAAACGGTCAATCGCTCGATAGCTAACTGCCTCCTGCAAATGCTGACGTGTGATAATGTCAGACTGATCAATATCAGCAATGGTTCGTGCAACttt                     <  3:207701/148‑1 (MQ=255)
                                                                                                                              aaaaGGGCGAAATGCCCTTTTTTTATGTCAGTAGTTTCTGCAGATGGATGAGCAAACGGTCAATCGCTCGATAGCTAACTGCCTCCTGCAAATGCTGACGTGTGATAATGTCAGACTGATCAATATCAGCAATGGTTCGTGCAACTTTc                    <  7:20124/149‑1 (MQ=255)
                                                                                                                                     cGAAATGCCCTTTTTTTATGTCAGTAGTTTCTGCAGATGGATGAGCAAACGGTCAATCGCTCGATAGCTAACTGCCTCCTGCAAATGCTGACGTGTGATAATGTCAGACTGATCAATATCAGCAATGGTTCGTGCAACTTTCAATAAcc             <  5:281494/149‑1 (MQ=255)
                                                                                                                                      gAAATGCCCTTTTTTTATGTCAGTAGTTTCTGCAGATGGATGAGCAAACGGTCAATCGCTCGATAGCTAACTGCCTCCTGCAAATGCTGACGTGTGATAATGTCAGACTGATCAATATCAGCAATGGTTCGTGCAACTTTCAATAACCg            >  6:89708/1‑149 (MQ=255)
                                                                                                                                       aaaTGCCCTTTTTTTATGTCAGTAGTTTCTGCAGATGGATGAGCAAACGGTCAATCGCTCGATAGCTAACTGCCTCCTGCAAATGCTGACGTGTGATAATGTCAGACTGATCAATATCAGCAATGGTTCGTGCAACTTTCAATAACCGc           <  8:101954/149‑1 (MQ=255)
                                                                                                                                       aaaTGCCCTTTTTTTATGTCAGTAGTTTCTGCAGATGGATGAGCAAACGGTCAATCGCTCGATAGCTAACTGCCTCCTGCAAATGCTGACGTGTGATAATGTCAGACTGATCAATATCAGCAATGGTTCGTGCAACTTTCAATAACCGc           <  6:86051/149‑1 (MQ=255)
                                                                                                                                           gCCCTTTTTTTATGTCAGTAGTTTCTGCAGATGGATGAGCAAACGGTCAAt                                                                                                         <  6:67947/51‑1 (MQ=255)
                                                                                                                                           gCCCTTTTTTTATGTCAGTAGTTTCTGCAGATGGATGAGCAAACGGTCAAt                                                                                                         >  5:67947/1‑51 (MQ=255)
                                                                                                                                            cccTTTTTTTATGTCAGTAGTTTCTGCAGATGGATGAGCAAACGGTCAATCGCTCGATAGCTAACTGCCTACTGCAAATGCTGACGTGTGATAATGTCAGTCGGATCAATATCAGCAATGGTTCGTGCAAGTTTCAATAACCGCTGcac      >  8:466130/1‑147 (MQ=255)
                                                                                                                                                 tttttATGTCAGTAGTTTCTGCAGATGGATGAGCAAACGGTCAATCGCTCGATAGCTAACTGCCTCCTGCAAATGCTGACGTGTGATAATGTCAGACTGATCAATATCAGCAATGGTTCGTGCAACTTTCAATAACCGCTGCCAGGc   <  3:198575/147‑1 (MQ=255)
                                                                                                                                                 tttttATGTCAGTAGTTTCTGCAGATGGATGAGCAAACGGTCAATCGCTCGATAGCTAACTGCCTCCTGCAAATGCTGACGTGTGATAATGTCAGACTGATCAATATCAGCAATGGTTCGTGCAACTTTCAATAACCGCTGCCAGGCa  <  5:259585/148‑1 (MQ=255)
                                                                                                                                                    |                                                                                                                                                
AGAAGCAGAACGCGTGTGGTCCAAGTATATGACGCGTATTAAGCGTCCAAAACGTTTTCACACCCTTTCCGGCGGTAAACCGCAGGTTGAAGGTGCTGAAGACTACACCGATTCTGACGATTAATAAAAAGGGCGAAATGCCCTTTTTTTATGTCAGTAGTTTCTGCAGATGGATGAGCAAACGGTCAATCGCTCGATAGCTAACTGCCTCCTGCAAATGCTGACGTGTGATAATGTCAGACTGATCAATATCAGCAATGGTTCGTGCAACTTTCAATAACCGCTGCCAGGCA  >  NC_000913/3948301‑3948593

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.