New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	= 521828	31 (0.960)	6 (0.200)	6/236	3.0	18.0%	coding (1413/2415 nt)	ybbP	putative ABC transporter permease
	?	NC_000913	= 521858	26 (0.860)					coding (1443/2415 nt)	ybbP	putative ABC transporter permease
Rejected: Frequency below/above cutoff threshold.

CTGAAATCGCTGCCTCTGCGCCTGGCGGTTAGCCGCCTGTTACGTCAGCCGTGGTCAACGTTAAGTCAGCTTTCGGCATTTTCGCTCTCCTTTATGCTGCTGGCACTGCTGCTGGTGTTGCGTGGCGATCTGCTCGACCGCTGGCAGCAGCAGCTACCTCCAGAAAGCCCGAACTACTTTTTAATTAACATCGCCACAGAACAGGTAGCACCGCTAAAAGCGTTCCTCGCGGAACATCAGATAGTCCCGGAATCGTTTTATCCGGTGGTGCGGGCGCGGCTGACGGCGAT  >  NC_000913/521715‑522004                                                                                                                                                |                                                                                                                                                   cTGAAATCGCTGCCTCTGCGCCTGGCGGTTAGCCGCCTGTTACGTCAGCCGTGGTCAACGTTAAGTCAGCTTTCGGCATTTTCGCTCTCCTTTATGCTGCTGGCACTGCTGCTGGTGTTGCGTGGCGATCTGCTCGACCGCTTGcagca                                                                                                                                               >  4:78303‑M2/1‑144 (MQ=255)       tCGCTGCCTCTGCGCCTGGCGGTTAGCCGCCTGTTACGTCAGCCGTGGTCAACGTTAAGTCAGCTTTCGGCATTTTCGCTCTCCTTTATGCTGCTGGCACTGCTGCTGGTGTTGCGTGGCGATCTGCTCGACCGCTGGCAGCAGCAGCt                                                                                                                                         <  2:138160/149‑1 (MQ=255)          cTGCCTCTGCGCCTGGCGGTTAGCCGCCTGTTACGTCAGCCGTGGTCAACGTTAAGTCAGCTTTCGGCATTTTCGCTCTCCTTTATGCTGCTGGCACTGCTGCTGGTGTTGCGTGGCGATCTGCTCGACCGCTGGCAGCAGCAGCTAcc                                                                                                                                      >  3:3462/1‑149 (MQ=255)                       tGGCGGTTAGCCGCCTGTTACGTCAGCCGTGGTCAACGTTAAGTCAGCTTTCGGCATTTTCGCTCTCCTTTATGCTGCTGGCACTGCTGCTGGTGTTGCGTGGCGATCTGCTCGACCGCTGGCAGCAGCAGCTACCTCCAGAAAGccc                                                                                                                          >  2:34496/1‑148 (MQ=255)                                     cTGTTACGTCAGCCGTGGTCAACGTTAAGTCAGCTTTCGGCATTTTCGCTCTCCTTTATGCTGCTGGCACTGCTGCTGGTGTTGCGTGGCGATCTGCTCGACCGCTGGCAGCAGCAGCTACCTCCAGAAAGCCCGAACTACTTTttaat                                                                                                           >  6:128872/1‑149 (MQ=255)                                        ttACGTCAGCCGTGGTCAACGTTAAGTCAGCTTTCGGCATTTTCGCTCTCCTTTATGCTGCTGGCACTGCTGCTGGTGTTGCGTGGCGATCTGCTCGACCGCTGGCAGCAGCAGCTACCTCCAGAAAGCCCGAACTACTTTttaatt                                                                                                          <  1:100895/147‑1 (MQ=255)                                          aCGTCAGCCGTGGTCAACGTTAAGTCAGCTTTAGGCATTTTCGCTCTCCTTTATGCTGCTGGCACTGATGCTGGTGTTGCGTGGCGATCTGCTCGCCCGCTGGCAGCAGCAGCTACCTCCAGAAAGCCCGAACTACTTTTTAATTAAc                                                                                                       >  8:118220/1‑148 (MQ=255)                                                  cGTGGTCAACGTTAAGTCAGCTTTCGGCATTTTCGCTCTCCTTTATGCTGCTGGCACTGCTGCTGGTGTTGCGTGGCGATCTGCTCGACCGCTGGCAGCAGCAGCTACCTCCAGAAAGCCCGAACTACTTTTTAATTAACATCGCcaca                                                                                              <  4:3462/149‑1 (MQ=255)                                                      gTCAACGTTAAGTCAGCTTTCGGCATTTTCGCTCTCCTTTATGCTGCTGGCACTGCTGCTGGTGTTGCGTGGCGATCTGCTCGACCGCTGGCAGCAGCAGCTACCTCCAGAAAGCCCGAacta                                                                                                                    <  1:35614/123‑1 (MQ=255)                                                      gTCAACGTTAAGTCAGCTTTCGGCATTTTCGCTCTCCTTTATGCTGCTGGCACTGCTGCTGGTGTTGCGTGGCGATCTGCTCGACCGCTGGCAGCAGCAGCTACCTCCAGAAAGCCCGAacta                                                                                                                    >  2:35614/1‑123 (MQ=255)                                                      gTCAACGTTAAGTCAGCTTTCGGCATTTTCGCTCTCCTTTATGCTGCTGGCACTGCTGCTGGTGTTGCGTGGCGATCTGCTCGACCGCTGGCAGCAGCAGCTACCTCCAGAAAGCCCGAACTACTTTttaat                                                                                                           <  3:34054/132‑1 (MQ=255)                                                      gTCAACGTTAAGTCAGCTTTCGGCATTTTCGCTCTCCTTTATGCTGCTGGCACTGCTGCTGGTGTTGCGTGGCGATCTGCTCGACCGCTGGCAGCAGCAGCTACCTCCAGAAAGCCCGAACTACTTTttaat                                                                                                           >  4:34054/1‑132 (MQ=255)                                                      gTCAACGTTAAGTCAGCTTTCGGCATTTTCGCTCTCCTTTATGCTGCTGGCACTGCTGCTGGTGTTGCGTGGCGATCTGCTCGACCGCTGGCAGCAGCAGCTACCTCCAGAAAGCCCAAACTACTTTTTAATTAACATCGCCACAGaa                                                                                           >  6:132461/1‑148 (MQ=255)                                                        cAACGTTAAGTCAGCTTTCGGCATTTTCGCTCTCCTTTATGCTGCTGGCACTGCTGCTGGTGTTGCGTGGCGATCTGCTCGACCGCTGGCAGCAGCAGCTACCTCCAGAAAGCCCGAACTACTTTTTAATTAACATCGCCACAGAAc                                                                                          <  6:72020/147‑1 (MQ=255)                                                        cAACGTTAAGTCAGCTTTCGGCATTTTCGCTCTCCTTTATGCTGCTGGCACTGCTGCTGGTGTTGCGTGGCGATCTGCTCGACCGCTGGCAGCAGCAGCTACCTCCAGAAAGCCCGAACTACTTTTTAATTAACATCGCCACAGAAc                                                                                          >  5:72020/1‑147 (MQ=255)                                                                aGTCCGCTTTCGGCATTTTCGCTCTCCTTTATGCTGCTGGCACTGCTGCTGGTGTTGCGTGGCGATCTGCTCGACCGCTGGCAGCAGCAGCTACCTCCAGAAAGCCCTAACTACTTTTTAATTAACATCGCCACAGAACAGGTAGCAcc                                                                                <  5:132461/149‑1 (MQ=255)                                                                                          cTTTATGCTGCTGGCACTGCTGCTGGTGTTGCGTGGCGATCTGCTCGACCGCTGGCAGCAGCAGCTACCTCCAGAAAGCCCGAACTACTTTTTAATTAACATCGCCACAGAACAGGTAGCACCGCTAAAAGCGTTCCTCGCGGAACAt                                                       >  6:74955/1‑148 (MQ=255)                                                                                                  tgctgGCACTGCTGCTGGTGTTGCGTGGCGATCTGCTCGACCGCTGGCAGCAGCAGCTACCTCCAGAAAGCCCGAACTACTTTttaattaa                                                                                                        <  4:91221/91‑1 (MQ=255)                                                                                                  tgctgGCACTGCTGCTGGTGTTGCGTGGCGATCTGCTCGACCGCTGGCAGCAGCAGCTACCTCCAGAAAGCCCGAACTACTTTttaattaa                                                                                                        >  3:91221/1‑91 (MQ=255)                                                                                                   gctgGCACTGCTGCTGGTGTTGCGTGGCGATCTGCTCGACCGCTGGCAGCAGCAGCTACCTCCAGAAAGCCCGAACTACTTTTTAATTAACATCGCCACAGAACAGGTAGCACCGCt                                                                             >  2:81808/1‑117 (MQ=255)                                                                                                   gctgGCACTGCTGCTGGTGTTGCGTGGCGATCTGCTCGACCGCTGGCAGCAGCAGCTACCTCCAGAAAGCCCGAACTACTTTTTAATTAACATCGCCACAGAACAGGTAGCACCGCt                                                                             <  1:81808/117‑1 (MQ=255)                                                                                                       gCACTGCTGCTGGTGTTGCGTGGCGATCTGCTCGACCGCTGGcagcagcagcagtgccagcagcataaaggagagcgaaaatgccgaaagctgacttaacgttgaccacggctgacgtaacaggcgg                                                               >  5:104422‑M2/1‑42 (MQ=255)                                                                                                       gCACTGCTGCTGGTGTTGCGTGGCGATCTGCTCGACCGCTGGcagcagcagcagtgccagcagcataaaggagagcgaaaatgccgaaagctgacttaacgttgaccacggctgacgtaacaggcgg                                                               <  6:104422‑M2/127‑86 (MQ=255)                                                                                                         aCTGCTGCTGGTGTTGCGTGGCGATCTGCTCGACCGCTGGcagcagcagtgccagcagcataaaggagagcgaaaatgccgaaagctgccttaacgttgaccacggctgacgtaacaggcggctaaccgccaggcgcagaggcagcgat                                       <  5:22214‑M2/149‑110 (MQ=255)                                                                                                             ctgctgGTGTTGCGTGGCGATCTGCTCGACCGCTGGcagcagcagtgccagcagcataaaggagagcgaaaatgccgaaagctgacttaacgttgaccacggctgacgtaacaggcggctaaccgccaggcgca                                                  <  4:70563‑M2/134‑99 (MQ=255)                                                                                                             ctgctgGTGTTGCGTGGCGATCTGCTCGACCGCTGGcagcagcagtgccagcagcataaaggagagcgaaaatgccgaaagctgacttaacgttgaccacggctgacgtaacaggcggctaaccgccaggcgca                                                  >  3:70563‑M2/1‑36 (MQ=255)                                                                                                             ctgctgGTGTTGCGTGGCGATCTGCTCGACCGCTGGCAGCAGCAGCTACCTCCAGAAAGCCCGAACTACTTTTTAATTAACATCGCCACAGAACAGGTAGCACCGCTAAAAGCGTTCCTCGCGGAACATCAGATAGTCCCGGAATCGtt                                   <  5:128872/149‑1 (MQ=255)                                                                                                                            ggCGATCTGCTCGACCGCTGGcagcagcagtgccagcagcataaaggagagcgaaaatgccgaaagctgccttaacgttgaccacggctgacgtaacaggcggctaaccgccaggcgcagaggcagcgatttcagcgtcatgcggcgaa                    >  6:22214‑M2/1‑21 (MQ=255)                                                                                                                            ggCGATCTGCTCGACCGCTGGCAGCAGCAGCTACCTCCAGAAAGCCCGAACTACTTTTTAATTAACATCGCCACAGAACAGGTAGCACCGCTAAAAGCGTTCCTcgc                                                              >  5:40579/1‑107 (MQ=255)                                                                                                                            ggCGATCTGCTCGACCGCTGGCAGCAGCAGCTACCTCCAGAAAGCCCGAACTACTTTTTAATTAACATCGCCACAGAACAGGTAGCACCGCTAAAAGCGTTCCTcgc                                                              <  6:40579/107‑1 (MQ=255)                                                                                                                                      tCGACCGCTGGCAGCAGCAGCTACCTCCAGAAAGCCCGAACTACTTTTTAATTAACATCGCCACAGAACAGGTAGCACCGCTAAAAGCGTTCCTCGCGGAACATCAGATAGTCCCGGAATCGTTTTATCCGGTGGTGCGGGCGCGGCt           >  2:53490/1‑148 (MQ=255)                                                                                                                                             cTGGCAGCAGCAGCTACCTCCAGAAAGCCCGAACTACTTTTTAATTAACATCGCCACAGAACAGGTAGCACCGCTAAAAGCGTTCCTCGCGGAACATCAGATAGTCCCGGAATCGTTTTATCCGGTGGTGCGGGCGCGGCTGACGGCGa   <  1:53490/149‑1 (MQ=255)                                                                                                                                              tGGCAGCAGCAGCTACCTCCAGAAAGCCCGAACTACTTTTTAATTAACATCGCCACAGAACAGGTAGCACCGCTAAAAGCGTTCCTCGCGGAACATCAGATAGTCCCGGAATCGTTTTATCCGGTGGTGCGGGCGCGGCTGACGGCGAt  >  2:35766/1‑149 (MQ=255)                                                                                                                                                |                                                                                                                                                   CTGAAATCGCTGCCTCTGCGCCTGGCGGTTAGCCGCCTGTTACGTCAGCCGTGGTCAACGTTAAGTCAGCTTTCGGCATTTTCGCTCTCCTTTATGCTGCTGGCACTGCTGCTGGTGTTGCGTGGCGATCTGCTCGACCGCTGGCAGCAGCAGCTACCTCCAGAAAGCCCGAACTACTTTTTAATTAACATCGCCACAGAACAGGTAGCACCGCTAAAAGCGTTCCTCGCGGAACATCAGATAGTCCCGGAATCGTTTTATCCGGTGGTGCGGGCGCGGCTGACGGCGAT  >  NC_000913/521715‑522004

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.