New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	= 4593141	32 (0.920)	4 (0.120)	4/260	4.0	11.5%	coding (1485/1656 nt)	tsr	methyl‑accepting chemotaxis protein I, serine sensor receptor
	?	NC_000913	= 4593191	31 (0.930)					coding (1535/1656 nt)	tsr	methyl‑accepting chemotaxis protein I, serine sensor receptor
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

CATTATGGGCGAAATTGCTTCTGCTTCTGATGAGCAGAGCCGTGGTATCGATCAGGTTGGCTTAGCGGTTGCTGAGATGGACCGGGTAACTCAACAGAACGCCGCGCTGGTGGAAGAGTCTGCCGCTGCCGCCGCCGCGCTGGAAGAGCAGGCCAGTCGCCTGACCGAAGCAGTGGCAGTGTTCCGGATTCAGCAACAGCAGCGTGAAACATCGGCTGTGGTAAAAACCGTGACGCCAGCTGCGCCGCGTAAAATGGC  >  NC_000913/4593018‑4593275                                                                                                                            |                                                                                                                                       cATTATGGGCGAAATTGCTTCTGCTTCTGATGAGCAGAGCCGTGGTATCGATCAGGTTGGCTTAGCGGTTGCTGAGATGGACCGGGTAACTCAACAGAACGCCGCGCTGGTGGAAGAGTCTGCCGCTGCCGCCGCCGCGCTGGAAGAGc                                                                                                               <  5:73090/149‑1 (MQ=255)    tATGGGCGAAATTGCTTCTGCTTCTGATGAGCAGAGCCGTGGTATCGATCAGGTTGGCTTAGCGGTTGCTGAGATGGACCGGGTAACTCAACAGAACGCCGCGCTGGTGGAAGAGTCTGCCGCTGCCGCCGCCGCGCTGGAAGAGCAgg                                                                                                            >  6:109050/1‑149 (MQ=255)       gggCGAAATTGCTTCTGCTTCTGATGAGCAGAGCCGTGGTATCGATCAGGTTGGCTTAGCGGTTGCTGAGATGGACCGGGTAACTCAACAGAACGCCGCGCTGGTGGAAGAGTCTGCCGCTGCCGCCGCCGCGCTGGAAGAGCAGGc                                                                                                           >  8:118192/1‑147 (MQ=255)        ggCGAAATTGCTTCTGCTTCTGATGAGCATAGCCGTGGTATCGATAAGGGTGGCTTAGAGGTTGCTGACATGGACAGGGTAACTCAACAGAACGCCGCGCTGGTGGAAGAGTCTGCCGCTGCCGCCGCAGCGCTGGAAGCGCCTGCCAg                                                                                                        >  8:104920/1‑149 (MQ=255)            aaaTTGCTTCTGCTTCTGATGAGCAGAGCCGTGGTATCGATCAGGTTGGCTTAGCGGTTGCTGAGATGGACCGGGTAACTCAACAGAACGCCGCGCTGGTGGAAGAGTCTGCCGCTGCCGCCGCCGCGCTGGAAGAGCAGGCCAGTCGc                                                                                                    <  7:118192/149‑1 (MQ=255)                 gattctgcttctgATGAGCAGAGCCGTGGTATCGATCAGGTTGGCTTAGCGGTTGCTGAGATGGACCGGGTAACTCAACAGAACGCCGCGCTGGTGGAAGAGTCTGCCTCTGCCGCCGCCGCGCGGGAAGATCAGGCCAGTCGCCTGAc                                                                                               >  4:90611/3‑149 (MQ=255)                                     gagCCGTGGTATCGATCAGGTTGGCTTAGCGGTTGCTGAGATGGACCGGGTAACTCAACAGAACGCCGCGCTGGTGGAAGAGTCTGCCGCTGCCGCCGCCGCGCTGGAAGAGCAGGCCAGTCGCCTGACCGAAGCAGTGGCAGTGTTcc                                                                           >  8:8242/1‑149 (MQ=255)                                       gCCGTGGTATCGATCAGGTTGGCGTAGCGGTTGCTGAGAGGGACCGGGTAACTCAACAGCACGCCGCGCTGGTGGAAGAGGCTGCCGATGCCGCAGCCGCGCTGGAAGAGCAGTCCAGTCTCCTGACCGAAGCAGTGGCAGTGTTCCgg                                                                         <  7:104920/149‑1 (MQ=255)                                              tATCGCTCAGGTGCGCGTCGCTGGTGCTGAGATGGCCCGCGTAACTCAACAGAACGCAGCGCTGGTGGAAGAGTCTGCCGCTGCCTCCGCCGCGCTGGAAGAGCAGGCCAGTCGCCTGACCGAAGCAGTGGCAGGGTTCCGGATTCAGc                                                                  <  3:90611/149‑1 (MQ=255)                                                   aTCAGGTTGGCTTAGCGGTTGCTGAGATGGACCGGGTAACTCAACAGAACGCCGCGCTGGTGGAAGAGTCTGCCGCTGCCGCCGCCGCGCTGGAAGAGCAGGCCAGTCGCCTGACCGAAGCAGTGGCAGTGTTCCGGATTCAGCAAcag                                                             >  6:110018/1‑149 (MQ=255)                                                        gTTGGCTTAGCGGTTGCTGAGATGGACCGGGTAACTCAACAGAACGCCGCGCTGGTGGAAGAGTCTGCCGCTGCCGCCGCCGCGCTGGAAGAGCAGGc                                                                                                           <  2:113178/98‑1 (MQ=255)                                                              ttAGCGGTTGCTGAGATGGACCGGGTAACTCAACAGAACGCCGCGCTGGTGGAAGAGTCTGCCGCTGCCGCCGCCGCGCTGGAAGAGCAGGCCAGTCGCCTGACCGAAGCAGTGGCAGTGTTCCGGATTCAGCAACAGCAGCGTGaaa                                                   >  6:63150/1‑148 (MQ=255)                                                                    gTTGCTGAGATGGACCGGGTAACTCAACAGAACTCCGCCCTGGTGGAATAGTCTGCCGATCCCGCCTCCGCGCAGTAATAGCAGGCCACTCGCCAGAACGAAGCAGTTGAAGTGTTCCTGa                                                                        >  6:86458/1‑121 (MQ=255)                                                                    gTTGCTGAGATGGACCGGGTAACTCAACAGAACGCCGCGCTGGTGGAAGAGTCTGCCGCTGCCGCCGCCGCGCTGGAAGAGCAGGCCAGTCGCCTGACCGAAGCAGTGGCAGTGTTCCGGa                                                                        <  5:86458/121‑1 (MQ=255)                                                                                  ccGGGTAACTCAACAGAACGCCGCGCTGGTGGAAGAGTCTGCCGCTGCCGCCGCCGCGCTGGAAGAGCAGGCCAGTCGCCTGACCGAAGCAGTGGCAGTGTTCCGGATTCAGCAACAGCAGCGTGAAACATCGGCTGTGGTAAAAACCg                              >  5:62864/1‑149 (MQ=255)                                                                                   cGGGTAACTCAACAGAACGCCGCGCTGGTGGAAGAGTCTGCCGCTGCCGCCGCCGCGCTGGAAGAGCAGGCCAGTCGCCTGACCGAAGCAGTGGCAGTGTTCCGGATTCAGCAACAGCAGCGTGAAACATCGGCTGTGGTAAAAACCGt                             <  5:63150/149‑1 (MQ=255)                                                                                          cTCAACAGAACGCCGCGCTGGTGGAAGAGTCTGCCGCTGCCGCCGCCGCGCTGGAAGAGCAGGCCAGTCGCCTGACCGAAGCAGTGGCAGTGTTCCGGATTCAGCAACAGCAGCGTGAAACATCGGCTGTGGTAAAAACCGTGACGc                        >  2:6864/1‑147 (MQ=255)                                                                                          cTCAACAGAACGCCGCGCTGGTGGAAGAGTCTGCCGCTGCCGCCGCCGCGCTGGAAGAGCAGGCCAGTCGCCTGACCGAAGCAGTGGCAGTGTTCCGGATTCAGCAACAGCAGCGTGAAACATCGGCTGTGGTAAAAACCGTGACGCCa                      >  4:13580/1‑149 (MQ=255)                                                                                           tCAACAGAACGCCGCGCTGGTGGAAGAGTCTGCCGCTGCCGCCGCCGCGCTGGAAGAGCAGGCCAGTCGCCTGACCGAAGCAGTGGCAGTGTTCCGGATTCAGCAACAGCAGCGTGAAACATCGGCTGTGGTAAAAACCGTGACGCCAg                     >  1:162651/1‑149 (MQ=255)                                                                                           tCAACAGAACGCCGCGCTGGTGGAAGAGTCTGCCGCTGCCGCCGCCGCGCTGGAAGAGCAGGCCAGTCGCCTGACCGAAGCAGTGGCAGTGTTCCGGATTCAGCAACAGCAGCGTGAAACATCGGCTGTGGTAAAAACCGTGACGCCAg                     >  4:75596/1‑149 (MQ=255)                                                                                             aaCAGAACGCCGCGCTGGTGGAAGAGTCTGCCGCTGCCGCCGCCGCGCTGGAAGAGCAGGCCAGTCGCCTGCCCGAAGCAGTGGCAGTGTTCCGGATTCAGCAACAGCAGCGTGAAACATCGGCTGTGGTAAAAACCGTGACGCCAGCt                   >  4:79198/1‑149 (MQ=255)                                                                                             aaCAGAACGCCGCGCTGGTGGAAGAGTCTGCCGCTGCCGCCGCCGCGCTGGAAGAGCAGGCCAGTCGCCTGACCGAAGCAGTGGCAGTGTTCCGGATTCAGCAACAGCAGCGTGAAACATCGGCTGTGGTAAAAACCGTGACGCCAGCt                   >  4:49610/1‑149 (MQ=255)                                                                                              aCAGAACGCCGCGCTGGTGGAAGAGTCTGCCGCTGCCGCCGCCGCGCTGGAAGAGCAGGCCAGTCGCCTGACCGAAGCAGTGGCAGTGTTCCGGATTCAGCAACAGCAGCGTGAAACATCGGCTGTGGTAAAAACCGTGACGCCAGCTg                  <  7:8242/149‑1 (MQ=255)                                                                                               cAGAACGCCGCGCTGGTGGAAGAGTCTGCCGCTGCCGCCGCCGCGCTGGAAGAGCAGGCCAGTCGCCTGACCGAAGCAGTGGCAGTGTTCCGGATTCAGCAACAGCAGCGTGAAACATCGGCTGTGGTAAAAACCGTGACGCCAGCTgc                 <  2:162651/149‑1 (MQ=255)                                                                                                     gccgcGCTGGTGGAAGAGTCTGCCGCTGCCGCCGCCGCGCTGGAAGAGCAGGCCAGTCGCCTGACCGAAGCAGTGGCAGTGTTCCGGATTCAGCAACAGCAGCGTGAAACATCGGCTGTGGTAAAAACCGTGACGCCAGCTGCGCcgcg           <  3:75596/149‑1 (MQ=255)                                                                                                     gccgcGCTGGTGGAAGAGTCTGCCGCTGCCGCCGCCGCGCTGGAAGAGCAGGCCAGTCGCCTGACCGAAGCAGTGGCAGTGTTCCGGATTCAGCAACAGCAGCGTGAAACATCGGCTGTGGTAAAAACCGTGACGCCAGCTGCGCcgcg           >  1:64549/1‑149 (MQ=255)                                                                                                              gtggAAGAGTCTGCCGCTGCCGCCGCCGCGCTGGAAGAGCAGGCCAGTCGCCTGACCGAAGCAGTGGCAGTGTTCCGGATTCAGCAACAGCAGCGTGAAACATCGGCTGTGGTAAAAACCGTGACGCCAGCTGCGCCGCGTAAAATgg   <  6:62864/148‑1 (MQ=255)                                                                                                              gtggAAGAGTCTGCCGCTGCCGCCGCCGCGCTGGAAGAGCAGGCCAGTCGCCTGACCGAAGCAGTGGCAGTGTTCCGGATTCAGCAACAGCAGCGTGAAACATCGGCTGTGGTAAAAACCGTGACGCCAGCTGCGCCGCGTAAAATg    <  1:6864/147‑1 (MQ=255)                                                                                                              gtggAAGAGTCTGCCGCTGCCGCCGCCGCGCTGGAAGAGCAGGCCAGTCGCCTGACCGAAGCAGTGGCAGTGTTCCGGATTCAGCAACAGCAGCGTGAAACATCGGCTGTGGTAAAAACCGTGACGCCAGCTGCGCCGCGTAAAATGGc  <  5:109050/149‑1 (MQ=255)                                                                                                              gtggAAGAGTCTGCCGCTGCCGCCGCCGCGCTGGAAGAGCAGGCCAGTCGCCTGACCGAAGCAGTGGCAGTGTTCCGGATTCAGCAACAGCAGCGTGAAACATCGGCTGTGGTAAAAACCGTGACGCCAGCTGCGCCGCGTAAAATGGc  >  4:10433/1‑149 (MQ=255)                                                                                                               tggAAGAGTCTGCCGCTGCCGCCGCCGCGCTGGAAGAGCAGGCCAGTCGCCTGACCGAAGCAGTGGCAGTGTTCCGGATTCAGCAACAGCAGCGTGAAACATCGGCTGTGGTAAAAACCGTGACGCCAg                     >  7:12862/1‑129 (MQ=255)                                                                                                               tggAAGAGTCTGCCGCTGCCGCCGCCGCGCTGGAAGAGCAGGCCAGTCGCCTGACCGAAGCAGTGGCAGTGTTCCGGATTCAGCAACAGCAGCGTGAAACATCGGCTGTGGTAAAAACCGTGACGCCAg                     <  8:12862/129‑1 (MQ=255)                                                                                                                            |                                                                                                                                       CATTATGGGCGAAATTGCTTCTGCTTCTGATGAGCAGAGCCGTGGTATCGATCAGGTTGGCTTAGCGGTTGCTGAGATGGACCGGGTAACTCAACAGAACGCCGCGCTGGTGGAAGAGTCTGCCGCTGCCGCCGCCGCGCTGGAAGAGCAGGCCAGTCGCCTGACCGAAGCAGTGGCAGTGTTCCGGATTCAGCAACAGCAGCGTGAAACATCGGCTGTGGTAAAAACCGTGACGCCAGCTGCGCCGCGTAAAATGGC  >  NC_000913/4593018‑4593275

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.