Predicted mutation
evidence seq id position mutation annotation gene description
JC JC NC_000913 1,293,032 IS1 (–) +8 bp intergenic (‑110/‑488) hns ← / → tdk global DNA‑binding transcriptional dual regulator H‑NS/thymidine kinase/deoxyuridine kinase

New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 257908 =NA (NA)43 (0.950) 38/282 0.2 100% noncoding (768/768 nt) IS1 repeat region
?NC_000913 = 1293039 0 (0.000)intergenic (‑117/‑488) hns/tdk global DNA‑binding transcriptional dual regulator H‑NS/thymidine kinase/deoxyuridine kinase
* ? NC_000913 1293032 =0 (0.000)51 (1.120) 43/282 0.1 100% intergenic (‑110/‑495) hns/tdk global DNA‑binding transcriptional dual regulator H‑NS/thymidine kinase/deoxyuridine kinase
?NC_000913 = 1979270 NA (NA)noncoding (1/768 nt) IS1 repeat region

GATGTTGTTCAGAATTTTAAGTGCTTCGCTCATTGTAGTAATCTCAAACTTATATTGGGGTGGTTTGTTGAGGTAATAATAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCGATGATTTCGCAGCACGTGAGGTTAAAACTTCCTGATTCATGTCACATTTTATGGGGAGATTATCGTAGGC  >  NC_000913/1292890‑1293172
                                                                                                                                              |                                                                                                                                            
gATGTTGTTCAGAATTTTAAGTGCTTCGCTCATTGTAGTAATCTCAAACTTATATTGGGGTGGTTTGTTGAGGTAATAATAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTAttt                                                                                                                                              >  2:822068/1‑143 (MQ=255)
 cgctgatgtccggcggtgcttttgccgttacgcaccaccccgtcagtagctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcacctt                                                                                                                                             <  2:618164‑M1/2‑1 (MQ=255)
    tgatgtccggcggtgcttttgccgttacgcaccaccccgtcagtagctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccTtgtg                                                                                                                                          <  1:786716‑M1/5‑1 (MQ=255)
     tgttCAGAATTTTAAGTGCTTCGCTCATTGTAGTAATCTCAAACTTATATTGGGGTGGTTTGTTGAGGTAATAATAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTgc                                                                                                                                         <  1:717881/143‑1 (MQ=255)
       ttCAGAATTTTAAGTGCTTCGCTCATTGTAGTAATCTCAAACTTATATTGGGGTGGTTTGTTGAGGTAATAATAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTgccg                                                                                                                                       >  1:151774/1‑143 (MQ=255)
       ttCAGAATTTTAAGTGCTTCGCTCATTGTAGTAATCTCAAACTTATATTGGGGTGGTTTGTTGAGGTAATAATAGAGCCTTAAAGTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAACTTGTTCTTTATTTAGTgacg                                                                                                                                       >  2:8162/1‑143 (MQ=255)
           gAATTTTAAGTGCTTCGCTCATTGTAGTAATCTCAAACTTATATTGGGGTGGTTTGTAGAGATAAAACTAATACCAGAAACGCGTTTGTGCAATAGCCAGGCATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGggta                                                                                                                                   <  1:191225‑M2/143‑5 (MQ=255)
            aaTTTTAAGTGCTTCGCTCATTGTAGTAATCTCAAACTTATATTGGGGTGGTTTGTTGAGGTAATAATAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGggtaa                                                                                                                                  >  1:294654‑M2/1‑138 (MQ=255)
             gcggtgcttttgccgttacgcaccaccccgtcagtagctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccTTGTGCCGCCaata                                                                                                                                 <  1:396851‑M1/14‑1 (MQ=255)
              ttttAAGTGCTTCGCTCATTGTAGTAATCTCAAACTTATATTGGGGTGGTTTGTTGAGGTAATAATAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAACTGTTCTTTATTTTGTGCCGggtaatg                                                                                                                                <  2:7419‑M2/143‑8 (MQ=255)
                gtgcgtctgccgtgaggtgccaccccgtcagtagctgaacaggagggacagctgatagaaacagaagccactggagcaccgcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccTTGTGCCGCCaataaat                                                                                                                              >  2:561596‑M1/127‑143 (MQ=255)
                  aaGTGCTTCGCTCATTGTAGTAATCTCAAACTTATATTGGGGTGGTTTGTTGAGGTAATAATAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGggtaatgactc                                                                                                                            >  2:508391‑M2/1‑132 (MQ=255)
                    ttttgccgttacgcaccaccccgtcagtagctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccTTGTGCGGCCAATAAATATCt                                                                                                                          <  1:2059‑M1/21‑1 (MQ=255)
                     tttgccgttacgcaccaccccgtcagtagctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccTTGTGCCGCAAATAAATATCtt                                                                                                                         <  2:41985‑M1/22‑1 (MQ=255)
                         ccgttacgcaccaccccgtcagtagctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccTTGTGCCGCCAAGAAATATCTTTTCa                                                                                                                     <  1:661660‑M1/26‑1 (MQ=255)
                           gCTCATTGTAGTAATCTCAAACTTATATTGGGGTGGTTTGTTGAGGTAATAATAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGggtaatgactccaacttatt                                                                                                                   >  1:185666‑M2/1‑123 (MQ=255)
                            ttacgcaccaccccgtcagtagctgaacaggagggacagctgatagaaacagaagccactggagcacctccaaaacaccatcatacactaaatcagtaagttggcagcatcaccTTGTGCCGCCAATAAATATCTTTTCATaa                                                                                                                  <  2:460344‑M1/29‑1 (MQ=255)
                             tCATTGTAGTAATCTCAAACTTATATTGGGGTGGTTTGTTGAGGTAATAATAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGggtaatgactccaacttattga                                                                                                                 <  1:659600‑M2/143‑23 (MQ=255)
                              acgcaccaccccgtcaggagctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccTTGTGCCGCCAATAAATATCTTTTCATaaaa                                                                                                                >  1:479719‑M1/113‑143 (MQ=255)
                               aTTGTAGTAATCTCAAACTTATATTGGGGTGGTTTGTTGAGGTAATAATAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGggtaatgactccaacttattgata                                                                                                               >  1:590348‑M2/1‑119 (MQ=255)
                                  accaccccgtcagtagctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcataccctaaatcagtaagttggcagcatcaccTTGTGCCGCCAATAAATATCTTTTCATAAAATTAg                                                                                                            <  2:95613‑M1/35‑1 (MQ=255)
                                  accaccccgtcagtagctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccTTGTGCCGCCAATAAATATCTTTTCATAAAATTAg                                                                                                            <  1:334929‑M1/35‑1 (MQ=255)
                                   ccacaccgtcagtagctgaacaggagggacagctgacagaaacagatgccactggagcccctcaaaaactccatcttccactaaatcagtaagttggcagcatcaccTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGc                                                                                                           >  2:59120‑M1/108‑143 (MQ=255)
                                       cccgtcagtagctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccTTGTGCCGCCAATAAATATCTTTTCATAAAATTCGCCAGa                                                                                                       <  2:41489‑M1/40‑1 (MQ=255)
                                        agctcgaACTTATATCGGGGTGGTTTGTTGAGGTAAGAATAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGggtaatgactccaacttattgatagtgttttat                                                                                                      >  2:619144‑M2/3‑110 (MQ=255)
                                        aTCTCGAGCTTTTATTGGGTTGGTTTGTTGAGGTGATAATAGGGCCTTAAGTTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGggtaatgtctccaacttattgatagtgttttat                                                                                                      >  2:656870‑M2/1‑110 (MQ=255)
                                           tcAAACTTATATTGGGGTGGTTTGTTGAGGTAATAATAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTGTTTGTTGTGGACCGgaaaatgacgccgatgtattgatagtgttttatgtt                                                                                                   <  1:185006‑M2/143‑37 (MQ=255)
                                            cAAACTTATATTGGGGTGGTTTGTTGAGCTAATAATAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGggtaatgactccaacttattgatagtgttttatgttc                                                                                                  >  1:828611‑M2/1‑106 (MQ=255)
                                               tagctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccTTGTGCCGCCAATACATATCTTTTCCTAAAATTACCCAGCAAAGAcgc                                                                                               <  2:290838‑M1/48‑1 (MQ=255)
                                               gttgtgagcatgagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGAcgc                                                                                               >  2:708808‑M1/96‑143 (MQ=255)
                                                  ctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaaggtggcagcatcagcTTGTGCCGCCAATAATTATACTGCCGTAAAATTAGCTGTAGAAGACGCGGc                                                                                            <  2:579522‑M1/51‑1 (MQ=255)
                                                   tgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCa                                                                                           <  2:733210‑M1/52‑1 (MQ=255)
                                                      acaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCatat                                                                                        <  1:762766‑M1/55‑1 (MQ=255)
                                                      acaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagtgggcagcatcaccTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCatat                                                                                        >  2:770569‑M1/89‑143 (MQ=255)
                                                        aggagggagagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccTTGTGCCGCCAATAAATATCTGTTCATAAAAGTAGCCAGAAAAGACGCGGCATATAg                                                                                      >  2:351294‑M1/87‑143 (MQ=255)
                                                          ggtggtTTGTTGAGGTAATAATAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGggtaatgactccaacttattgatagtgttttatgttcagataatgtccgat                                                                                    <  1:175853‑M2/143‑52 (MQ=255)
                                                          gagggacagctgatagaaacagaagccactggagcacctcaaaaacacaatcatacactaactgagtaagttggcagcatcaccTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCAAGAAAAGACGCGGCAGATAGcc                                                                                    <  2:66727‑M1/59‑1 (MQ=255)
                                                            tggtTTGTTGAGGTAATAATAGAGCCTTGAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatga                                                                                  <  2:791594‑M2/143‑54 (MQ=255)
                                                              gtTTGTTGAGGTAATAATAGAGCCTTAAATTCAGTTGTGCAATAGACAGGAATGTAAGGAATTCAAAATTGTTATTTATTTTGTGCCGggtaatgaccccaccttattgatagtgttttatgttcagctaatgcccgctgact                                                                                <  1:83965‑M2/143‑56 (MQ=255)
                                                               acagctgatagaaacagaagccactggagcaccccaaaaacaccatcatacactaaatcagtaagttggcagcatcaccTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTAtt                                                                               >  2:519903‑M1/80‑143 (MQ=255)
                                                                    tgACGTAATCATAGATCCGTAAATTCAGTTGTGCAAGAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtca                                                                          >  2:469896‑M2/1‑82 (MQ=255)
                                                                        gTAATAATAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgcctttgtcatgca                                                                      <  1:386566‑M2/143‑66 (MQ=255)
                                                                        agaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtacgttggcagcatcaccTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATCTACACCgat                                                                      <  2:423418‑M1/73‑1 (MQ=255)
                                                                          aataatAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagc                                                                    <  1:8452‑M2/143‑68 (MQ=255)
                                                                          aaacagcagccactggagcacctcaacaacaccatcctacactaaatcagtaagttggcagcatcaccTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGGCGCGGCATATAGCCCTATTTACACCgatga                                                                    >  2:22846‑M1/69‑143 (MQ=255)
                                                                           ataataGGAGCTTAGATGCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagct                                                                   >  2:654321‑M2/1‑75 (MQ=255)
                                                                                   gCCTTAAATGCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgat                                                           >  2:622368‑M2/1‑67 (MQ=255)
                                                                                     actggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCGATGATTTCGCAGCAc                                                         <  1:94387‑M1/86‑1 (MQ=255)
                                                                                      ttAAATTCAGTTGTGCAATAGCCAGGCATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgatttt                                                        >  1:26832‑M2/1‑64 (MQ=255)
                                                                                      ttAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgatttt                                                        <  1:457608‑M2/143‑80 (MQ=255)
                                                                                        aaaTTCAGTTGTGCCACAGCCAAGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttga                                                      >  1:514673‑M2/1‑62 (MQ=255)
                                                                                         gtgcacctcaaaaacaccatcttaccgtcaatcattaagttggcagcatcaccTTGTGCCGCCAATAAATATCTGTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCGATGATTTCGCAGCACGTGa                                                     >  2:361241‑M1/54‑143 (MQ=255)
                                                                                          aTTAAGTTGTGCAATCGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgaggtctttgtcatgcagctccaccgattttgaga                                                    >  2:434100‑M2/1‑60 (MQ=255)
                                                                                           gcacctcaaaaacaccatcatacactaaatcagtaagttggccgcatcaccTTGTGCCGCCAATAAATATCTTTTCATCAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCGATGATCTCGCAGCACGTGAgg                                                   <  2:389718‑M1/92‑1 (MQ=255)
                                                                                           gcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCGATGATTTCGCAGCACGTGAgg                                                   <  2:389724‑M1/92‑1 (MQ=255)
                                                                                            tCAGTTGTCCAATAGCCAGGAATGTAAGGCATTCAAAATTGTTCTTGATTTTGTGCCGggtaatgactccaacttattgatagtgttctatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaac                                                  >  1:76918‑M2/1‑58 (MQ=255)
                                                                                            cacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccTTGTGCCGCCAATATATATCTTTACATAGAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCGATGATTTCGCAGCACGTGAGGt                                                  <  1:423304‑M1/93‑1 (MQ=255)
                                                                                                tcaagaacaccatcatacactaaatcagtaagttagcagcaacgccTTGTGCCGCCAATAAATATCTTTTCATAATATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCGATGATTTCGCTGCACGTGAGGTTaaa                                              >  2:200555‑M1/47‑143 (MQ=255)
                                                                                                tcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGACCAGACGCGGAATATAGCCCTATTTACACCGATGATTTCGCAGCACCTCAGGTTaaa                                              <  2:244414‑M1/97‑1 (MQ=255)
                                                                                                tcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCGATGATTTCGCAGCACGCGAGGCTaaa                                              <  2:22583‑M1/97‑1 (MQ=255)
                                                                                                tcaaaaacaccatcatacactaaaccagtaagttggcagcatcaccTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCGATGATTTCGCAGCACGTGAGGTTaaa                                              >  2:755046‑M1/47‑143 (MQ=255)
                                                                                                 caaaaacaccatcagacactaaatcagtaagttggcagcatcaccTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCGATGATTTCGCAGCACGTGAGGTTaaaa                                             >  2:334655‑M1/46‑143 (MQ=255)
                                                                                                   tgCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcg                                           <  1:370455‑M2/143‑93 (MQ=255)
                                                                                                      aaTAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgact                                        <  2:519801‑M2/143‑96 (MQ=255)
                                                                                                       aTAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgactt                                       >  1:447283‑M2/1‑47 (MQ=255)
                                                                                                           ccAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgt                                   >  2:413031‑M2/1‑43 (MQ=255)
                                                                                                            cAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtc                                  <  2:451067‑M2/143‑102 (MQ=255)
                                                                                                            cAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGggtaaggactccaacttattgatagtgttatatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgccagcgacttccgtc                                  <  2:96804‑M2/143‑102 (MQ=255)
                                                                                                             aGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtcc                                 <  2:398686‑M2/143‑103 (MQ=255)
                                                                                                               tgcgctgaatcagtaagttggcagcatcaccTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGGCGCGGCATATAGCCCTATTTACACCGATGATTTCGCAGCACGTGAGGTTAAAACTTCCTGATTCATg                               >  2:415561‑M1/32‑143 (MQ=255)
                                                                                                               gAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtccca                               >  1:139197‑M2/1‑39 (MQ=255)
                                                                                                               gAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtccca                               >  1:493481‑M2/1‑39 (MQ=255)
                                                                                                                acactaaatcagtaagttggcagcatcaccTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCGATGATTTCGCAGCATGTGAGGTTAAAACTTCCTGATTCATGt                              >  1:524299‑M1/31‑143 (MQ=255)
                                                                                                                  ggtAAGGAATTCAAGATTGTTCTTTATTTTGTGCCGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtcccagcc                            >  2:501833‑M2/2‑36 (MQ=255)
                                                                                                                  actaaatcagtaagttggcagcatcaccTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCGATGATTTCGCAGCACGTGAGGTTAAAACTTCCTGATTCATGTca                            >  2:35082‑M1/29‑143 (MQ=255)
                                                                                                                   ctaaatcagtaagttggcagcatcaccTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCGATGATTTCGCAGCACGTGAGGTTAAAACTTCCTGATTCATGTcac                           <  1:493422‑M1/116‑1 (MQ=255)
                                                                                                                     aaatcagtaagttggcagcatcaccTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCGATGATTTCGCAGCACGTGAGGTTAAAACTTCCTGATTCATGTCACAt                         <  1:828404‑M1/118‑1 (MQ=255)
                                                                                                                      aGGAATTCAAAATTGTTCTTTATTTTGTGCCGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtcccagccctgc                        <  2:464748‑M2/143‑112 (MQ=255)
                                                                                                                        gAATTCAAAATTGTTCTTTATTTTGTGCCGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtcccagccgtgcca                      <  1:190115‑M2/143‑114 (MQ=255)
                                                                                                                         cagtaagttggcagcatcaccTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCGATGATTTCGCAGCACGTGAGGTTAAAACTTCCTGATTCATGTCACATTTTa                     >  2:334929‑M1/22‑143 (MQ=255)
                                                                                                                          agtaagttggcagcctacccTTGTGCCGCCAATAAGTATCTCTTCATAAAATTAGCCAGGAAAGACGCGGCATATAGCCCTATTTACACCGATGATTTCGCAGCACGTGAGGTTAAAACTTCCTGATTCATGTCACATTTTAt                    >  2:188076‑M1/21‑143 (MQ=255)
                                                                                                                            tatgctggcagcatcagcGTGTGCCGCCAGTCAATAGCTTTTCATAAAATTAGCCAGTAAGGACGCGGCATAGAGCCCTATGTACACCGATGATTTCGCAGCACGTGAGGTTAAAACTTCCTGATTCATGTCACATTTTATgg                  >  2:88977‑M1/19‑143 (MQ=255)
                                                                                                                            taagctggcagcatcaccTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAACGACGCGGCATATAGCCCTATTTACACCGATGATTTCGCAGCCCGTGAGGTTAAAACTTCCTGATTCCTTTCACCTTTTATgg                  <  2:595040‑M1/125‑1 (MQ=255)
                                                                                                                              agttggcagcatcaccTGGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCGATGATTGCGCAGCACGTGAGGTTAAAACTTCCTGATTCATGTCACATTTTATgggg                >  1:627759‑M1/17‑143 (MQ=255)
                                                                                                                              agcgggcagcaacaccCTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCGATGATTTCGCAGCACGTGAGGTTAAAACTTCCTGATTCATGTCACATTTTATgggg                >  1:627766‑M1/17‑143 (MQ=255)
                                                                                                                              aaaaTTGTTCTTTATTTTGTGCCGggtaatgactccaacttattgatagtgttttatgttcagctaatgcccgatgactttgtcatgctgctccgccgattttcagaacgacagcgccttcagtccccgccgtgcccgggggt                <  2:70122‑M2/143‑120 (MQ=255)
                                                                                                                              aaaaTTGTTCTTTATTTTGTGCCGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtcccagccgtgccaggtgct                <  1:170769‑M2/143‑120 (MQ=255)
                                                                                                                                aaTTGTTCTTTATTTTGTGCCGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcggcttccgtcccagccctgccaggtgctgc              <  1:33227‑M2/143‑122 (MQ=255)
                                                                                                                                 tggcagcatcaccTTGTGCCGCCAATAAATATCTTTTCATAATATTAGCCAGCTGTGTCGCGGCATATAGCCCTATTTACACCGATGATTTCGCAGCACGTGGGGTTATTTCTTCCTGATTCATGTCACATTTTATGGGgaga             >  2:210592‑M1/14‑143 (MQ=255)
                                                                                                                                  ggcagcatcaccTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAACGACGCGGCATATAGCCCTATTTACACCGATGATTTCGCAGCACGTGAGGTTAAAACTTCCTGATTCATGGCACATTTTATGcggaggt            <  2:466419‑M1/131‑3 (MQ=255)
                                                                                                                                  ggcagcatcaccTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCGATGATTTCGCAGCACGTGAGGTTAAAACTTCCTGATTCATGTCACATTTTATGGTGAGAt            <  2:681685‑M1/131‑1 (MQ=255)
                                                                                                                                    cagcatcaccTTCTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCGATGATTTCGCAGCACGTGAGGTTAAAACTTCCTGATTCATGTCACATTTTATGGGGAGATTa          >  2:414654‑M1/11‑143 (MQ=255)
                                                                                                                                      tCTTTATTGTGTGCCGgttaatgactccaacttagtgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtcccagccgtgccaggtgctgcctcaga        >  1:759257‑M2/1‑16 (MQ=255)
                                                                                                                                       catcaccTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCGATGATTTCGCAGCACGTGAGGTTAAAACTTCCTGATTCATGTCACATTTTATGGGGAGATTATCg       >  1:255624‑M1/8‑143 (MQ=255)
                                                                                                                                        tttATTTTGTGCCGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtcccagccgtgccaggtgctgcctcagatt      <  1:687083‑M2/143‑130 (MQ=255)
                                                                                                                                        tttATTTTGTGCCGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtcccagccgtgccaggtgctgcctcagatt      <  1:765742‑M2/143‑130 (MQ=255)
                                                                                                                                            ccTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCGATGATTTCGCAGCACGTGAGGTTAAAACTTCCTGATTCATGTCACATTTTATGGGGAGATTATCGTAGGc  <  1:629062‑M1/141‑1 (MQ=255)
                                                                                                                                              |                                                                                                                                            
GATGTTGTTCAGAATTTTAAGTGCTTCGCTCATTGTAGTAATCTCAAACTTATATTGGGGTGGTTTGTTGAGGTAATAATAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCGATGATTTCGCAGCACGTGAGGTTAAAACTTCCTGATTCATGTCACATTTTATGGGGAGATTATCGTAGGC  >  NC_000913/1292890‑1293172

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.