| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| JC | NC_000913 | 4,001,645 | Δ5 bp | coding (220‑224/951 nt) | corA → | magnesium/nickel/cobalt transporter |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 4001644 | 1 (0.020) | 43 (1.070) | 37/282 | 0.1 | 97.7% | coding (219/951 nt) | corA | magnesium/nickel/cobalt transporter |
| ? | NC_000913 | 4001650 = | 1 (0.020) | coding (225/951 nt) | corA | magnesium/nickel/cobalt transporter | |||||
GTATGGATTGATCTTGTCGAACCGGACGACGACGAGCGACTGCGCGTACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATATTCACTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGGTCGTCTGTTTACTCTGCGTGAGCGTGAACTGCCCGCTTTTCGTCTGTATCGTATGCGTGCCCGTA > NC_000913/4001504‑4001786 | gTATGGATTGATCTTGTCGAACCGGACGACGACGAGCGACTGCGCGTACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATct < 1:218611‑M1/143‑3 (MQ=255) cgttgaTCGTGTCGAACCGGACGACGACGAGCGACTGCGCGTACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttc < 2:721281‑M1/141‑8 (MQ=255) tGATCTTGTCGAACCGGACGACCACGAGCGACTGCGCGCACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCAGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttc < 1:466958‑M1/143‑11 (MQ=255) tCTTGTCGAACCGGACGACGACGAGCGACTGCGCGTACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttc > 1:89130‑M1/1‑130 (MQ=255) tCTTGTCGAACCGGACGACGACGAGCGACTGCGCGTACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttc < 1:309309‑M1/143‑14 (MQ=255) tggcgacCCTGACGACGACGACCGACTGCGCGTACAATCTGAACTTGGCCAAAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttcttt < 1:471828‑M1/140‑17 (MQ=255) aCCGGACGACGACGAGCGACTGCGCGTACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGCACTGGAAGACATCGAAGCATCGGCACGCTTCTTTGAAGACGACGCCGGCCTGCATctccttctgcagctttgaagag > 1:703409‑M1/1‑121 (MQ=255) ggACGACGACGAGCGACTGCGCGTACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcg < 1:231530‑M1/143‑26 (MQ=255) ggACGACAACCGGCGACGGGGCCGACAATCTGAACTTGGGCAGGGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcg < 2:315312‑M1/143‑26 (MQ=255) gacgacgacGAGCGACTGCGCGTGCAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcgg < 1:564294‑M1/143‑27 (MQ=255) gaGCGACTGCGCGTACAATCTGAACTTGGCCAGAGCCTGTCAACCAGCGTCGGCGGGAAATACAGCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacg < 1:165923‑M1/143‑36 (MQ=255) gaGCGACCGGGCGGAGAATCGGAACTTGGCCAGGGCAGGGCAACCCGCCAGGAAAAAGAAGTCGTCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacg < 1:166059‑M1/143‑36 (MQ=255) gTACAATCTGAACTGGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaactcca < 2:487074‑M1/143‑48 (MQ=255) cgaCAATCCGCCCTTGGCCAGAGCCTGGCCACCTGACCGTGACTGGAAGACCGCGAACGATCGGCACCTTTCGTTGAAGACGACGTCTGCCTTCAT‑‑‑‑‑CTCCTGCTACTTCTTTGAAGATGCGGAAGATTACGCCGGTAACTCCa < 2:237201/141‑1 (MQ=255) tACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaactccac < 2:399466‑M1/143‑49 (MQ=255) aTCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtcactctactgtg > 1:394584‑M1/1‑91 (MQ=255) aTCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaactcccctgtg > 1:10617‑M1/1‑91 (MQ=255) tCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaactccactgtgg > 1:58039‑M1/1‑90 (MQ=255) aaCTTGGCCAGAGCCCGGCAACCCGCCCGGAACTGCAAGACATCGAAGCATCGCCACGTTTCTTTGAAGACGACCACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaactccactgtggcatt < 1:147510‑M1/143‑58 (MQ=255) acgtggcCAGAGCCGGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGGCGGCCTGCAGctccttcttcttctttgaagatgcggaagatcacgccggtaactccactggggcattt < 1:704149‑M1/140‑59 (MQ=255) ttGGCAGGAGCCTGGCATCCCGCGCGGAACTGGAAGCCAGCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcaggccggtaactccactgtggcatttac < 2:640612‑M1/143‑61 (MQ=255) ggCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcatccgtgagtagtcggaagaacacgccggtacctccactgtggcattcacca > 2:673857‑M1/1‑81 (MQ=255) tcctGGCGACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTACATctctttcttcttctttgaagatgcggaagatcacgccggtaactccactgtggcatttaccatccgtga < 2:677031‑M1/142‑70 (MQ=255) tGGCAACCGGCCCGGACCCGGAAGACATCGAAGCATCGGCACGTCTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcgggagatcacgccggtaactccactgtggcatttaccatccgtgatgg < 1:297165‑M1/143‑73 (MQ=255) aaCCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaactccactgtggcatttaccatccgtgatggtcgt > 1:407345‑M1/1‑67 (MQ=255) aCCCGCCCGGAACTGAAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaactccactgtggcatttaccatccgtgatggtcgtc < 2:211878‑M1/143‑78 (MQ=255) cccgcgcgGAACGGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACTACGACGGCCTGCATcgccttcttcttctttgaagatgcggaagatcacgccggtaactccactgtggcatttaccatccgtgatggtcgtct < 2:674970‑M1/143‑79 (MQ=255) gcccgGAACTGGAGGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaactccactgtggcatttaccatccgtgatggtcgtctgtt < 2:624980‑M1/143‑82 (MQ=255) gcccgGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggcagatcacgccggtaactccactgtggcatttaccatccgtgatggtcgtctgtt < 1:381066‑M1/143‑82 (MQ=255) ggAACCGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCACctccttcttcttcttggaagatgcggaagatcacgccggtaactccactgtggcatttaccatccgtgatggtcgtctgtttact < 2:424653‑M1/143‑86 (MQ=255) tGGAAGACATCGAAGCAGCGGCACGTGTCTTGGAAGACGACGACGGCCTGCATctccttcttcttctttgaagacgcggaagatcacgccggtaacgccactgtggcatttaccatccgtgatggtcgtctgtttactctgcg < 1:150601‑M1/143‑91 (MQ=255) gAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttatttgaagatgcggaagatcacgccggtaactccactgtggcatttaccatccgtgatggtcgtgtgtttactctgcgtg > 1:134470‑M1/1‑51 (MQ=255) gACATCGTAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagaggcggaagatcacgccggtaactccactgtggcatttaccatccgtgatggtcgtctgtttactctgcgtgagc < 2:132857‑M1/143‑96 (MQ=255) gACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttcttcgaagatgcggaagatcacgccggtaactccactgtggcatttaccatccgtgatggtcgtctgtttactctgcgtgagc < 1:69816‑M1/143‑96 (MQ=255) gACATCGAAGCATCGGCACCTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaactccactgtggcatttaccatccgtgatggtcgtctgtttactctgcgtgagc < 2:371614‑M1/143‑96 (MQ=255) cATCGAAGCATCGGCACGTTTCTTTGAAGACGACGCCGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaactccactgtggcatttaccatccgtgatggtcgtctgtttactctgcgtgagcgt < 1:196592‑M1/143‑98 (MQ=255) tCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaactccactgtggcatttaccatccgtgatggtcgtctgtttactctgcgtgagcgtga > 1:24301‑M1/1‑44 (MQ=255) ggCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaactccactgtggcatttaccatccgtgatggtcgtctgtttactctgcgtgggcgtgaacttcccgct > 1:48796‑M1/1‑34 (MQ=255) aCGTCTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgctgaagatcacgccggtaactccactgtggcatttaccatccgtgatggtcgtctgtttactctgcgtgagcgtgaactgcccgctttt < 1:479127‑M1/143‑113 (MQ=255) ttCTTTGAAGACGACGACGGCCTGCATctcctgcttcttctttgaagatgcggaagatcacgccggtaactccactgtggcatttaccatccgtgatggtcgtctgtttactctgcgtgagcgtgaactgcccgcttttcgtc < 2:95765‑M1/143‑117 (MQ=255) tCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaactccactgtggcatttaccatccgtgatggtcgtctgtttactctgcgtgagcgtgaactgcccgcttttcgtct < 1:287478‑M1/143‑118 (MQ=255) gacgacgGCCTGCATctccctcttcttctttgaagatgcggaagatcacgccggtaactccactgtggcatttaccatccgtgatggtcgtctgtttactctgcgtgagcgtgaactgcccgcttttcgtctgtatcgtatgc < 1:579408‑M1/143‑129 (MQ=255) cTGCATctccttcttcttctttgaagatgcggacgatcacgccggtaactccactgtggcatttaccatccgtgatggtcgtctgtttactctgcgtgggcgtgaactgcccgcttttcgcctgtatcgtctgcgtgtccgta > 1:531646‑M1/1‑6 (MQ=255) tctccttcttcttctttgaagatgcggaagatcacgccggtaactccactgtggcatttaccatccgtgatggtcgtctgtttactctgcgtgagcgtgaactgcccgcttttcgtctgtatcgtatgcgtgcccgtagccag > 1:427215‑M1/1‑1 (MQ=255) | GTATGGATTGATCTTGTCGAACCGGACGACGACGAGCGACTGCGCGTACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATATTCACTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGGTCGTCTGTTTACTCTGCGTGAGCGTGAACTGCCCGCTTTTCGTCTGTATCGTATGCGTGCCCGTA > NC_000913/4001504‑4001786 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |