| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| JC JC | NC_000913 | 1,979,486 | IS5 (+) +4 bp | intergenic (‑271/‑264) | insA ← / → uspC | IS1 repressor TnpA/universal stress protein |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | 1979486 = | 0 (0.000) | 104 (1.390) | 69/280 | 0.0 | 100% | intergenic (‑271/‑267) | insA/uspC | IS1 repressor TnpA/universal stress protein |
| ? | NC_000913 | 2101749 = | NA (NA) | noncoding (1195/1195 nt) | IS5 | repeat region | |||||
| * | ? | NC_000913 | = 1979489 | 0 (0.000) | 138 (1.840) | 77/280 | 0.0 | 100% | intergenic (‑274/‑264) | insA/uspC | IS1 repressor TnpA/universal stress protein |
| ? | NC_000913 | = 2290113 | NA (NA) | noncoding (1/1195 nt) | IS5 | repeat region | |||||
GAAAATCTCTTTTCTGGTCTGACGGCGCTTACTGCTGAATTCACTGTCGGCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCATAACGCTGTAGCCACCAGAACAGATATTGCGGAA‑CGACAAAGAGAAACAGAACCAGATTGATGCATTGAGCTTTCATCCTATGAAATTAATTGCTGTTAAAAGCATTGGGTACAGAAAATACCCATAGCTCCATACCC > NC_000913/2289974‑2290252 | gAAAATCTCTTTTCTGGTCTGACGGCGCTTACTGCTGAATTCACTGTCGGCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTAGCACCGTCCAtc > 2:460226/1‑142 (MQ=14) aaaaTCTCTTTTCTGGTCTGACGGCGCTTACTGCTGAATTCACTGTCGGCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCATaa < 2:493074/143‑1 (MQ=32) aaaaTCTCTTTTCGGGTCTGGCGGCGCTTACTGCTGAATTCACTGTCGGCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCATaa < 1:1337421/143‑1 (MQ=17) tctTTTCTGGTCTGACGGCGCTTACTGCTGAATTCACTGTCGGCGAAGGTAAGTTGATGACTCATGATGACCCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGCCTTGTTCGCACCTGCCCTACCGCTGt > 2:87607/1‑143 (MQ=11) tctTTTCTGGTCTGACGGCGCTTACTGCTGAATTCACTGTCGGCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACACACATGATCTCGTATCAGGGACTTGTTCGCACCTTCTCTAACGCTGt > 2:916216/1‑143 (MQ=255) tctTTTCTGGTCTGACGGCGCTTACTGCTGAATTCACTGTCGGCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCATAACGCTGt < 1:292927/143‑1 (MQ=38) ctgttgtGGTCTGACGGCGCTGACTGCTGAATTCACTGTCGGCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCATAACGCTGTa < 2:647157/137‑1 (MQ=255) ttttCTGGTCTGACGGCGCTTACTGCTGAATTCACTGTCGGCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCCGAACGCTGTAg > 1:60511/1‑143 (MQ=21) ttCTGGTCTGACGGCGCTTACTGCTGAATTCACTGTCGGCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCATAACGCTGTAGcc < 1:244031/143‑1 (MQ=40) gACGGCGCTTACTGCTGAATTCACTGTCGGCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACATTCCATAACGCTGTAGCCACCAGAACa > 2:767353/1‑143 (MQ=255) ttACTGCTGAATTCACTGTCGGCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCAAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCATAACGATGTAGCCACCAGAACAGAAATTga > 2:694023/1‑142 (MQ=255) ccgctgAATTCACTGTCGGCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCATAACGCTGTAGCCACCAGAACAGATATTGCGGa < 1:898414/141‑1 (MQ=255) tgctgAATTCACTGTCGGAGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCATAACGCTGTAGCCACCAGAACAGATATTGCGGaa > 2:824177/1‑143 (MQ=255) ctgAATTCACTGTCGGCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCATAACGCTGTAGCCAGCAGAACAGATATTGCGGaaag > 2:503572/1‑141 (MQ=255) tGTCGGCGAAGGTAAGTTGATGATTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCATAACGCTGTAGCCACCAGAACAGATATTGCGGAA‑CGACAAAGAGaa < 2:58913/143‑1 (MQ=255) gTCGGCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCATAACGCTGTAGCCACCAGAACAGATATTGCGGAA‑CGACAAAGAGaaa < 1:44008/143‑1 (MQ=255) tCGGCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACGTGATCTCCTTTCCGGGACTTGTTCACACCTACCATAACGCTGTAGCCACCAGAACAGATATTACAGAA‑AGACAAAGAGAAAc > 1:1039069/1‑143 (MQ=18) gCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACAGGATCGCATATCAGTGACTTGTTCGCACCTTCCATAACGCTCTAGCCACCAGAACAGATATTGCGCAA‑CGACAAACAGCAACaca > 2:629029/1‑141 (MQ=18) gAAGGTAAGTTGATGACTCATGATGAACCCTGATCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCATAACGCTGTAGCCACCAGAACAGATATTGCGGAA‑CGACAAAGCGAAACaacac > 2:1184811/1‑139 (MQ=255) gTAAGTTGATGACTCATGATGAACACTGTTCTATGGCTCCAGATGACAAACATGATATCATATCAGGGACTTGTTCGCACATTCAAAACCACGGCATCGTCCTGAACAGATATTGTGGAA‑CGACAAAGCGAAACAGAACCAGa > 2:882618/1‑143 (MQ=17) aaGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCATAACGCTGTAGCCACCAGAACAGATATTGCGGAA‑CGACAAAGAGAAACAGAACCAGAtt < 1:1141980/143‑1 (MQ=255) gTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCATAACGCTGTAGCCACCAGAACAGATATTGCGGAA‑CGACAAAGAGAAACAGAACCAGATTGa > 2:101985/1‑143 (MQ=255) ttGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCATAACGCTGTAGCCACCAGAACAGATATTGCGGAA‑CGACAAAGAGAAACAGAACCAGATTGAt < 1:70602/143‑1 (MQ=255) ttGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCATAACGCTGTAGCCACCAGAACAGATATTGCGGAA‑CGACAAAGAGAAACAGAACAAGATTGAt > 1:1213430/1‑143 (MQ=255) ttGATGACTCATGATGAACCCTGTTCAATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCATAACGCTGTAGCCACCAGAACAGATATTGCGGAA‑CGACAAAGAGAAACAGAACCAGATTGAt < 1:246019/143‑1 (MQ=255) gatgaCTCATGATGAACCCTGTTCTTGATTTCCAGATGACAAACATGCTCTCATATCAGGGACTTGTTCGCACCTTCCATAACGCTGTAGCCACCAGAACAGATATTGCGGAA‑CGACACAGTGAGACGGAGCCAGATTGATGc > 2:824110/1‑143 (MQ=21) atgaCTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCATAACTCTGTAGCCACCAGTACGGATATTGCGGAA‑CGACAAAGAGAAACAGAACCAGATTGATGcg > 1:503146/1‑142 (MQ=255) tgaCTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCATAACGCTGTAGCCACCAGAACAGATATTGCGGAA‑CGACAAAGAGAAACAGAACCAGACTGATGCAt > 2:429883/1‑143 (MQ=255) gaCTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATTCTCTCATATCAGGGACTTGTTCGCACCTTCCATAACGCTGTAGCCACCTGAACAGATATTGCGGAA‑CGACAAAGAGAAACAGAACCAGATTGATGCAtt < 1:186026/143‑1 (MQ=255) gaCTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCATAACGCTGTAGCCACCAGAACAGATATTGCGGAA‑CGACAAAGAGAAACAGAACCAGATTGATGCAtt < 1:587084/143‑1 (MQ=255) cTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCATAACGCTGTAGCCACCAGAACAGATATTGCGGAA‑CGACAAAGAGAAACAGAACCAGATTGATGCATTGa > 1:684322/1‑143 (MQ=255) tCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCATAACGCTGTAGCCACCAGAACAGATATTGCGGAA‑CGACAAAGAGAAACAGAACCAGATTGATGCATTGAg > 1:801087/1‑143 (MQ=255) tCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCATAACGCTGTAGCCACCAGAACAGATATTGCGGAA‑CGACAAAGAGAAACAGAACCAGATTGATGCATTGAg < 1:967138/143‑1 (MQ=255) tCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTACCATAACGCTGTAGCCACCAGAACAGATCATGCGGAA‑CGACAACGAGAACCCGAACCAGATTGATGCCTTGAg > 2:402322/1‑143 (MQ=21) tCAGGATGAGCCCTGTTCTATGGCTCCAGAGGACAAACAGGATCTCAGATCAGGGACTTGTTCGCACCTTCCAGAACGCTGGAGCCACCAGAACAGATATTGCGGAA‑CGACAAAGAGAAACAGAACCAGATTGATGCATTGAg < 2:966948/143‑1 (MQ=25) atgatgAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCATAACGCTGTAGCCACCAGAACAGATATTGCGGAA‑CGACAAAGAGAAACCGAACCAGATTGATGCATTGAgat > 1:452911/1‑141 (MQ=255) atgaACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCATAACGCTGTAGCCACCAGAACAGATATTGCGGAA‑CGACAAAGAGAAACAGAACCAGATTGATGCATTGAGCTTTc > 1:612672/1‑143 (MQ=255) aaCCCTGTTCTATGGCTCCAGATGACAAACAGGATCTCATATCAGGGACTTGTTCGCACCTTCCATAACGCTGTAGCCACCAGAACAGATATTGCGGAA‑CGACTAAGAGAAACAGAACCAGATTGATGCATTGAGCTTTCATc < 2:77664/143‑1 (MQ=255) cccTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCATAACGCTGTAGCCACCAGAACAGATATTGCGGAA‑CGACAAAGAGAAACAGAACCAGATTGATGCATTGAGCGTTCATCCt > 2:1283698/1‑143 (MQ=255) ccTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCATAACGCTGTAGACACCAGAACAGATATTGCGGCA‑CGACAAAGGGAAACAGAACCAGATTGATGCCTTGAGCTTTCATCCTa > 1:380477/1‑143 (MQ=255) tGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCATAACGTTGTAGCCACCAGAACAGATATTGCGGAA‑CGACAAAGAGAAACAGAACCAGATTGATGCATTGAGCTTTCATCCTATg < 1:1193213/143‑1 (MQ=255) tCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCATAACGCTGTAGCCACCAGAACAGATATTGCGGAA‑CGACAAAGAGAAACAGAACCAGATTGATGCATTGAGCTTTCATCCTATGaaa < 2:223460/143‑1 (MQ=255) tgccTCCATATCACAAACACCATCCCATATCAGGGACTTGTTCGCACCTTCCATAACGCTGTAGCCACCAGAACAGATATTGCGGAA‑CGACAAAGAGAAACAGAACCAGATTGATGCATTGAGCTTTCATCCTATGAaattaa < 1:1079916/140‑1 (MQ=39) tCCAGATGACAAACATGCTCTCATATCAGGGACTTGTTCGCACCTTCCATAACGCTGTAGCCACCCGCACAGATATTCCGGCA‑CGACACCGAGACACAGAACCAGATAGCTGCATTGAGCTTTCATCCTCTGAAATTACTTGc > 2:267312/1‑143 (MQ=25) tCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCATAACGCTGTAGCCACCAGAACAGATATTGCGGAA‑CGACAAAGAGAAACAGAACCAGATTGATGCATTGAGCTTTCATCCTATGAAATTAATTGc > 2:1352010/1‑143 (MQ=255) tCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCATAACGCTGTAGCCACCAGAACAGATATTGCGGAA‑CGACAAAGAGAAACAGAACCAGAATGATGCATTGAGCTTTCATCCTATGAAATTAATTGc > 2:130130/1‑143 (MQ=255) ccAGATGTCAATCATGATCTCATATCAGGGACTTGTTCGCACCTTCCATAACGCTGTAGCCACCAGAACAGATATTGCGGAA‑CGACAAAGAGAAACAGAACCAGATTGATGCATTGAGCTTTCATCCTATGAAATTAATTGCt < 1:2131/143‑1 (MQ=255) ccAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCATAACGCTGTAGCCACCAGAACAGATATTGCGGAA‑CGACAAAGAGAAACAGAACCAGATTGATGCATTGAGCTTTCATCCTATGAAATTAATTGCt < 2:1149315/143‑1 (MQ=255) cAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCATAACGCTGTAGCCACCAGAACAGATATTGCGGAA‑CGACAAAGAGAAACAGAACCAGATTGATGCATTGAGCTTTCATCCTATGAAATTAATTGCTg < 1:58952/143‑1 (MQ=255) aTGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCATAACGCTGTAGCCACCAGAACAGATATTGCGGCA‑CGACAAAGAGAAACAGAACCAGATTGATGCATTGAGCTTTCATCCTATGAAATTAATTGCTGTTa > 2:175920/1‑143 (MQ=255) cAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCATAACGCTGTAGCCACCAGAACAGATATTGCGGAA‑CGACAAAGAGAAACAGAACCAGATTGATGCATTGAGCTTTCATCCTATGAAATTAATTGCTGTTAAAAg > 2:932271/1‑143 (MQ=255) aaaCATGATCTCATATCAGGGACTTGTTCGCACCTTCCATAACGCTGTAGCCACCAGAACAGATATTGCGGAC‑CGACAAAGAGAAACAGAACCAGATTGATGCATTGAGCTTTCATCCTATGAAATTAATTGCTGTTAAAAGc > 1:1056418/1‑143 (MQ=255) aaaCATGATCTCATATCAGGGACTTGTTCGCACCTTCCATAACGCTGTAGCCACCAGAACAGATATTGCGGAA‑CGACAAAGAGAAACAGAACCAGATTGATGCATTGAGCTTTCATCCTATGAAATTAATTGCTGTTAAAAGc > 1:348047/1‑143 (MQ=255) aaaCATGATCTCATATCAGGGACTTGTTCGCACCTTCCATAACGCTGTAGCCACCAGAACAGATATTGCGGAA‑CGACAAAGAGAAACAGAACCAGATTGATGCATTGAGCTTTCATCACACGCAATCAATTGCTGTTAAAAGc > 2:1007134/1‑143 (MQ=39) aaCATGATCTCATATCAGGGACTTTGTCGCACCTTCCATAACGCTGTAGCCACCAGAACAGATATTGCTGAA‑CGACAAAGAGAAACAGAACCAGATTGATGCATTGAGCTTTCATCCTATGAAATTAATTGCTGTTAAAAGCa < 1:694023/143‑1 (MQ=255) gttGATCTCATAGGAGGGACTTGGTCGAAGATAACTGGACTGTGGAGCCACTAGCACAGATATTGCGGAA‑CGACAAAGAGAAACAGAACCAGATTGATGCATTGAGCTTTCATCCTATGAAATTAATTGCTGTTAAAAGCAtt < 2:951616/141‑1 (MQ=255) cATGATCTCATATCAGGGACTTGTTCGCACCTTCCATAACGCTGTAGCCACCAGAACAAATAATGCGGAA‑AGACAAAGAGAAACAGAACCAGATTGATGCATTGAGCTTTCATCCTATGAAATTAATTGCTGTTAAAAGCAtt > 1:236/1‑143 (MQ=255) tcATATCAGGGACTTGTTCGCACCTTCCATAACGCTGTAGCCACCAGAACAGATATTGCGGAA‑CGACAAAGAGAAACAGAACCAGATTGATGCATTGAGCTTTCATCCTATGAAATTAATTGCTGTTAAAAGCATTGGGTACa > 2:1240357/1‑143 (MQ=255) atatCAGGGACTTGTTCGCACCTTCCATAACGCTGTAGCCACCAGAACAGATATTGCGGAA‑CGACAAAGAGAAACAGAACCAGATTGATGCATTGAGCTTTCATCATATGAAATTAATTGCTGTTAAAAGCATTGGGTACAGa > 2:621741/1‑143 (MQ=255) tCAGGGACTTGTTCGCACCTTCCATAACGCTGTAGCCACCAGAACAGATATTGCGGAA‑CGACAAAGAGAAACAGAACCAGATTGATGCATTGAGCTTTCATCCTATGAAATTAATTGCTGTTAAAAGCATTGGGTACAGaaaa < 1:101985/143‑1 (MQ=255) cAGGGACTTGTTCGCACCTTCCATAACGCTGTAGCCACCAGAACAGATATTGCGGAA‑CGACAAAGAGAAACAGAACCAGATTGATGCATTGAGCTTTCATCCTATGAAATTAATTGCTGTTAAAAGCATTGGGTACAGAAAAt > 1:268909/1‑143 (MQ=255) cAGGGACTTGTTCGCACCTTCCATAACGCTGTAGCCACCAGAACAGATATTGCGGAA‑CGACAAAGAGAAACAGAACCAGATTGATGCATGGAGCTTTCATCCTATGAAATTAATTGCTGTTAAAAGCATTGGGTACAGAAAAt > 2:1094225/1‑143 (MQ=255) aGGGACTAGTTCGCAGCCTCCAGAACGCGGTAGCCACCAGAA‑ACAACTTATGTAATTTACAAAGCGACCGGGTAGCAGAGGGATGCATTGAGCTTTCATCCTATGAAATTAATTGCTGTTAAAAGCATTGGGTACAGAAAATa < 2:1316727/143‑1 (MQ=255) gggACTTGTTCGCACCTTCCATAACGCTGTAGCCACCAGAACAGATATTGCGGAA‑CGACAAAGAGAAACAGAACCAGATTGATGCATTGAGCTTTCATCCTATGAAATTAATAGCTGTTAAAAGCATTGGGTACAGAAAATAc > 1:429446/1‑143 (MQ=255) ggACTTGTTCGCACCTTCCATAACGCTGTAGCCACCAGAACAGATATTGCGGAA‑CGACAAAGAGAAACAGAACCAGATTGATGCATTGAGCTTTCATCCTATGAAATTAATGGCTGTTAAAAGCATTGGGTACAGAAAATAcc > 2:1195790/1‑143 (MQ=255) aCTTGTTCCCACCTTCCATAACGCTGTAGCCACCAGAACAGATATTGCGGAA‑CGACAAAGAGAAACAGAACCAGATTGATGCATTGAGCTTTCATCCTATGAAATTAATTGCTGTTAAAAGCATTGGGTACAGAAAATACCCa < 1:91543/143‑1 (MQ=255) ttGTTCGCACCTTCCATAACGCTGTAGCCACCAGAACAGATATTGCGGCA‑CGACAAAGAGAAACAGAACCAGATTGATGCATTGAGCTTTCATCCTATGAAATTAATTGCTGTTAAAAGCATTGGGTACAGAAAATACCCATa > 1:692853/1‑143 (MQ=255) ttGTTCGCACCTTCCATAACGCTGTAGCCACCAGAACAGATATTGCGGAA‑CGACAAAGAGAAACAGAACCAGATTGATGCATTGAGCTTTCATCCTATGAAATTAATTGCTGTTAAAAGCATTGGGTACAGAAAATACCCAtc > 2:183258/1‑142 (MQ=255) ttGTTCGCACCTTCCATAACGCTGTAGCCACCAGAACAGATATTGCGGAA‑CGACAAAGAGAAACAGAACCAGATTGATGCATTGAGCTTTCATCCTATGAAATTAATTGCTGTTAAAAGCATTGGGTACAGAAAATACCCATa > 1:58986/1‑143 (MQ=255) ttCGCACCTTCCATAACGCTGTAGCCACCAGAACAGATATTGCGGAA‑CGACAAAGAGAAACAGAACCAGATTGATGCATTGAGCTTTCATCCTATGAAATTAATTGCTGTTAAAAGCATTGGGTACAGAAAATACCCATAGCt > 2:897931/1‑143 (MQ=255) cGCACCTTCCATAACGCTGTAGCCACCAGAACAGATATTGCGGAA‑CGACAAAGAGAAACAGAACCAGATTGATGCATTGAGCTTTCATCCTATGAAATTAATTGCTGTTAAAAGCATTGGGTACAGAAAATACCCATAGCTcc > 1:170958/1‑143 (MQ=255) ccTTCCATGACGCTGGAGCCACCAGGACAGATATTGCGGAA‑CGACAAAGAGAAACAGAACCAGATTGATGCATTGAGCTTTCATCCTATGAAATTAATTGCTGTTAAAAGCATTGGGTACAGAAAATACCCATAGCTCCATAc < 1:505214/143‑1 (MQ=255) ccTTCCATAACGCTGTAGCCACCAGAACAGATATTGCGGAA‑CGACAAAGAGAAACAGAACCAGATTGATGCATTGAGCTTTCATCCTATGAAATTAATTGCTGTTAAAAGCATTGGGTACAGAAAATACCCATAGCTCCATAc > 1:1016226/1‑143 (MQ=255) cTTCCATAACGCTGTAGCCACCAGAACAGATATTGCGTAA‑CGACAGAGAGAAACAGAACCAGATTGATGCATTGAGCTTTCATGCTATGAAATTAATTGCTGTTAAAAGCATTGGGTACAGAAAATACGCATAGCTCCACAcc > 2:665432/1‑143 (MQ=255) cTTCCATAACGCTGTAGCCACCAGAACAGATATTGCGGAA‑CGACAAAGAGAAACAGAACCAGATTGATGc > 2:804638/1‑70 (MQ=255) cTTCCATAACGCTGTAGCCACCAGAACAGATATTGCGGAA‑CGACAAAGAGAAACAGAACCAGATTGATGc < 1:804638/70‑1 (MQ=255) ttCCATAACGCTGTAGCCACCAGAACAGATATTGCGGAA‑CGACAAAGAGAAACAGAACCAGATTGATGCATTGAGCTTTCATCCTATGAAATTAATTGCTGTTAAAAGCATTGGGTACAGAAAATACCCATAGCTCCATAccc > 2:107042/1‑143 (MQ=255) | GAAAATCTCTTTTCTGGTCTGACGGCGCTTACTGCTGAATTCACTGTCGGCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCATAACGCTGTAGCCACCAGAACAGATATTGCGGAA‑CGACAAAGAGAAACAGAACCAGATTGATGCATTGAGCTTTCATCCTATGAAATTAATTGCTGTTAAAAGCATTGGGTACAGAAAATACCCATAGCTCCATACCC > NC_000913/2289974‑2290252 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |