New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 332495150 (0.830)5 (0.090) 5/262 7.6 9.7% intergenic (‑40/+50) folP/ftsH 7,8‑dihydropteroate synthase/protease, ATP‑dependent zinc‑metallo
?NC_000913 = 3324959 47 (0.840)intergenic (‑48/+42) folP/ftsH 7,8‑dihydropteroate synthase/protease, ATP‑dependent zinc‑metallo
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

ATCCGAAAAGGAATCAGGCGTGACGTTGAGGATCCCCATTACGTGAGGATGGCTAAGGTCCAGTGAAGTACCCTGGGCAAAGAGTTTCATGATGTTATCCCTGGTATGAATTGATAAGAAAAAACCCCGGAGCACGCCCCGGGGTTTTCGGTACAAATACAGTCATCTGATGCGGGAACTTACTTGTCGCCTAACTGCTCTGACATGGTGTTACCCGGGTTCGGCGTACGCGGTTCATCAACCGGACGAGGAGCCTTTGGACTACCAT  >  NC_000913/3324822‑3325089
                                                                                                                                 |                                                                                                                                          
aTCCGAAAAGGAAGCAGGCGTGACGTTGCGGATCCCCATTACGTGAGGATGGCTAAGGTCCAGTGAAGTACCCTGGGCAAAGAGTTTCATGATGTTATCCCTGGTATGAATTGATAAGAAAAAACCCCGGAGCACGCCCCggg                                                                                                                               <  1:780294/143‑1 (MQ=255)
  ccGAAAAGGAATCAGGCGTGACGTTGAGGATCCCCATTACGTGAGGATGGCTAAGGTCCAGTGAAGTACCCTGGGCAAAGAGTTTCATGATGTTATCCCTGGTATGAATTGATAAGAAAAAACCCCGGGGCGTGCTCCGGGGt                                                                                                                             <  1:645758/143‑1 (MQ=255)
   ataaaaGTAATCAGGCGGGACGTTGAGGAGCCCCATTCCGTGAGGATGGCTAAGGTCCAGTGAAGTACCCTGGGCAAAGAGTTTCATGATGTTATCCCTGGTATGAATTGATAAGAAAAAACCCCGGAGCACGCCCCGGGGtt                                                                                                                            <  1:616811/141‑1 (MQ=255)
    gAAAAGGAATCAGGCGTGACGTTGAGGATCCCCATTACGTGAGGATGGCAAGGTCCAGTGAAGTACCCTGGGCAAAGAGTTTCATGATGTTATCCCTGGTATGAATTGATAAGAAAAAACCCCGGAGCACGCTCCGGCGtttt                                                                                                                          <  2:444297/143‑1 (MQ=255)
     gaagggAGTCGGGCGGGACGTTGAGGATCCCCATGACGTGAGGATGGCTAAGGGCCAGTGAAGGACCCTGGGCAAAGAGTTTCATGATGTTATCCCTGGTATGAATTGATAAGAAAAAACCCCGGAGCACGCCCCGGGGtttt                                                                                                                          <  2:423493/139‑1 (MQ=255)
       gaGGAATCCGGCGTGACGTTGAGGATCCCCATTACGTGAGGATGGATAAGTTTCTGTGAAGTCCCCTGGCTAAAGAGTTTCATGATGTTATCCCTGGTATGAATTGATAAGAAAAAACCCCGGAGCACGCCCCGGGGTTTTCg                                                                                                                        <  2:70801/142‑1 (MQ=255)
       aaGGAATCAGGCGTGACGTTGAGGATCCCCATTACGTGAGGATGGCTAAGGTCCAGTGAAGTACCCTGGGCAAAGAGTTTCATGATGTTATCCCTGGTATGAATTGATAAGAAAAAACCCCGGAGCACGCCCCGGGGTTTTCg                                                                                                                        <  2:511064/143‑1 (MQ=255)
          gAATCAGGCGTGACGTTGAGGATCCCCATTACGTGAGGATGGCTAAGGTCCAGTGAAGTACCCTGGGCAAAGAGTTTCATGATGTTATCCCTGGTATGAATTGATAAGAAAAAACCCCGGAGCACGCCCCGGGGGTTTCggga                                                                                                                     >  2:953660/1‑141 (MQ=255)
              cAGGCGTGACGTTGAGGATCCCCATTACGTGAGGATGGCTAAGGTCCAGTGAAGTACCCTGGGCAAAGAGTTTCATGATGTTATCCCTGGTATGAATTGATAAGAAAAAACCCCGGAGCACGCCCCGGGGTTTTCGGTACaaa                                                                                                                 <  2:344948/143‑1 (MQ=255)
               aGGCGTGACGTTGAGGATCCCCATTACGTGAGGATGGCTAAGGTCCAGTGAAGTACCCTGGGCAAAGAGTTTCATGAGGTTATCCCTGGTATGAATTGATAAGAAAAAACGCCGGGGGGCGCCCCGGGGGTTGCGGTagagag                                                                                                                >  1:189681/1‑138 (MQ=255)
                  cGTGACGTTGAGGATCCCCATTACGTGAGGATGGCTAAGGTCCAGTGAAGTACCCTGGGCAAAGAGTTTCATGATGTTATCCCTGGTATGAATTGATAAGAAAAAACCCCGGAGCACGCCCCGGGGTTTTCGGTACAAATACa                                                                                                             <  1:611195/143‑1 (MQ=255)
                     ggcggtGAGGATCCCCATGGCGTGAGGATGGCTAAGGTCCAGTGAAGGACCCTGGGCAAAGAGTTTCATGATGTTATCCCTGGTATGAATTGATAAGAAAAAACCCCGGAGCACGCCCCGGGGTTTTCGGTACAAATACAGTc                                                                                                          <  1:336069/138‑1 (MQ=255)
                       ggtggAGGATCCCCGTTACGTGAGGATGGCTAAGGTCCAGTGAAGTACCCTGGGCAAAGAGTTTCATGATGTTATCCCTGGTATGAATTGATAAGAAAAAACCCCGGGGGCCGCCCCAGGGTTTTCGGTACAAATACAGTCAt                                                                                                        <  2:80348/139‑1 (MQ=255)
                       cGTTGAGGATCCCCATGACGTGAGGATGGCTAAGGTCCAGTGAAGTACCCTGGGCAAAGAGTTTCATGATGTTATCCCTGGTATGAATTGATAAGAAAAAACCCCGGAGCACGCCCCGGGGTTTTCGGTACAAATACAGTCAt                                                                                                        <  2:375085/143‑1 (MQ=255)
                         ttGAGGATCCCCATTACGTGAGGATGGCTAAGGTCCAGTGAAGTACCCTGGGCAAAGAGTTTCATGATGTTATCCCTGGTATGAATTGATAAGAAAAAACCCCGGAGCACGCCCCGGGGTTTTCGGTACAAATCCAGTCATCt                                                                                                      >  1:88932/1‑143 (MQ=255)
                              aaTCCCTATTACGTGAGGATGGCTAAGGTCCAGTGAAGTAGCCTGGGCAAAGAGTTTCATGATGTTATCCCTGGTATGAATTGATAAGAAAAAACCCCGGAGCACGCCCCGGGGTTTTCGGTACAAATACAGTCATCTGATGc                                                                                                 <  1:350475/142‑1 (MQ=255)
                                tCCCCATTACGTGAGGATGGCTAAGGTCCAGTGAAGTACCCTGGGCAAAGAGTTTCATGATGTTATCCCTGGTATGAATTGATAAGAAAAAACCCCGGAGCACGCCCCGGGGTTTTCGGTACAAATACAGTCATCTGATGCgg                                                                                               <  1:608729/143‑1 (MQ=255)
                                tCCCCATTACGTGAGGATGGCTAAGGTCCAGTGAAGTACCCTGGGCAAAGAGTTTCATGATGTTATCCCTGGTATGAATTGATAAGAAAAAACCCCGGAGCACGCCCCGGGGTTTTCGGTACAAATACAGTCATCTGAGGCgg                                                                                               >  2:148705/1‑143 (MQ=255)
                                  cccATTACGTGAGGATGGCTAAGGTCCAGTGAAGTACCCTGGGCAAAGAGTTTCATGATGTTATCCCTGGTATGAATTGAGAAGAAACAACCGCGGAGCACGCCCCGGGGTTTTCGGTACAAATACAGTCATCTGATGCGGGa                                                                                             >  2:379862/1‑143 (MQ=255)
                                    cATTACGTGAGGATGGCTAAGGTCCAGTGAAGTACCCTGGGCAAAGAGTTTCATGATGTTATCCCTGGTATGAATTGATAAGAAAAAACCCCGGAGCACGCCCCGGGGTTTTCGGTACAAATACAGTCATCTGATGCGGGAac                                                                                           <  2:995348/143‑1 (MQ=255)
                                        aCGTGAGGCTGGCTTAGGTCCAGTGAAGTACCCTGGGCAGAGAGTTTCATGATGTTAGCCCTGGTATGAATTGATAAGAAAAAACCCCGGAGCACGCCCCGGGGTTTTCGGTACAAATACAGTCATCTGATGCGGGAacttac                                                                                       <  2:271365/143‑1 (MQ=255)
                                           tGAGGATGGCTAAGGTCCAGTGAAGTACCCTGGGCAAAGAGTTTCATGATGTTATCCCTGGTATGAATTGATAAGAAAAAAACCCGGAGCACGCCCCGGGGTTTTCGGTACAAATACAGTCATCTGATGCGGGAACTTACTTg                                                                                    >  2:381310/1‑143 (MQ=255)
                                             aGGATGGCTAAGTTCCAGTGAAGTACTCTGGGCAAAGGGTTTCATGATGTTATCCCTGGCATGAATTGATAAGAAAAAACCCCGGAGCACGCCCCGGGGTTTTCGGTACAAATACAGTCATCTGATGCGGGAACTTACTTGTc                                                                                  <  2:539452/143‑1 (MQ=255)
                                                 tGGCTAAGGTCCAGTGAAGTACCCTGGGCAAAGAGTTTCATGATGTTATCCCTGGTATGAAGCGCTAAGAAAAAACCCCGGAGCACGCCCCGGGGCTTTCGGTACAAATACAGTCATCTGATGCGGGGAATTCCTTGTCGGCt                                                                              >  2:183602/1‑143 (MQ=255)
                                                  ggCTAAGGTCCAGTGAAGTACCCTGGGCAAAGAGTTTCATGATGTTATCCCTGGTATGAATTGATAAGAAAAAACCCCGGAGCACGCCCCGGGGTTTTCGGTACAAATACAGTCATCTGATGCGGGAACTTACTTGTCGCCTa                                                                             <  2:388794/143‑1 (MQ=255)
                                                   gCTAAGGTCCAGTGAAGTACCCTGGGCAAAGAGTTTCATGATGTTATCCCTGGTATGAATTGATAAGAAAAAACCCCGGAGCACGCCCCGGGGTTTTCGGTACAAATACAGTCATCTGATGCGGGAACTTACTTGTCGCCTaa                                                                            <  2:859449/143‑1 (MQ=255)
                                                          gccacttaaGTACCCTGGGCAAAGAGTTTCATGATGTTATCCCTGGTATGAATTGATAAGAAAAAACCCCGGAGCACGCCCCGGGGTTTTCGGTACAGATACAGTCATCTGATGCGGGATCTTACTTGTCGCCTAACTGctct                                                                     <  2:615206/136‑1 (MQ=255)
                                                            cAGTGAAGTACCCTGGGCAAAGAGTTTCATGATGTTATCCCTGGTATGAATTGATAAGAAAAAACCCAGGAGCACGCCCCGGGGTTTTCGGTACAAATACAGTCATCTGATGCGGGAACTTACTTGTCGCCTCACTGCTCTGa                                                                   >  1:572414/1‑143 (MQ=255)
                                                                       ccTGGGCAAAGAGTTTCATGATGTTATCCCTGGTATGAATTGATAAGAAAAAACCCCGGAGCACGCCCCGGGGTTTTCGGTACAAATACAGTCATCTGATGCGGGAACTTACTTGTCGCCTAACTGCTCTGACATGGTGTTAc                                                        >  1:844752/1‑143 (MQ=255)
                                                                         tGGGCAAAGAGTTTCATGATGTTATCCCTGGTATGAATTGATAAGAAAAAACCCCGGAGCACGCCCCGGGGTTTTCGGTACAAATACAGTCATCTGATGCGGGAACTTACTTGTCGCCTAACTGCTCTGACATGGTGTTAccc                                                      <  1:540109/143‑1 (MQ=255)
                                                                             cAATGAGTTTCATGATGTTATCCCTGGTATGAATTGATAAGAAAAAACCACGGAGCACGCCCCGGAGTTTTCGGTACAAATACAGTCATCTGATGCGGGAACTTACTTGTCGCCTAACTGCTCTGACATGGTGTTACCCGGGt                                                  >  2:180219/1‑143 (MQ=255)
                                                                                agagTTTCATGATGTTATCCCTGGTATGAATTGATAAGAAAAAACCCCGGAGCACGCCCCGGGGTTTTCGGTACAAATACAGTCATCTGATGCGGGAACTTACTTGTCGCCTAACTGCTCTGCCATGGTGTTACTCGGGTTCg                                               >  1:942121/1‑143 (MQ=255)
                                                                                    tttCATGATGTTATCCCTGGTATGAATTGATAAGAAAAAACCCCGGAGCACGCCCCGGGGTTTTCGGTACAAATACAGTCATCTGATGCGGGAACTTACTTGTCGCCTAACTGCTCTGACATGGTGTTACCCGGGTTCGGCGt                                           >  1:768012/1‑143 (MQ=255)
                                                                                           cccttATCCCTGCTATGCATTGATCAGGAAAAACCCCGGAGCACGCCCCGGGGTTTTCGGTACAAATACAGTCATCTGATGCGGGAACTTACTTGTCGCCTAACTGCTCTGACATGGTGTTACCCGGGTTCGGCGTACGCGGt                                    <  2:177802/140‑1 (MQ=255)
                                                                                             ggtATCCCCGGTATGAAGTGATAAGAAAAAACCCCGGGGCACGCCCCGGGGTTTTCGGTACAAATACAGTCATCTGATGCGGGAACTTACTTGTCGCCTAACTGCTCTGACATGGTGTTACCCGGGTTCGGCGTACGCGGTtc                                  <  2:369240/141‑1 (MQ=255)
                                                                                               tagcctgggTATGAAGTGATAAGAAAAAACCCCGGAGCACGCCCCGGTGTTTTCGGTACAAATACAGTCATCTGATGCGGGAACTTACTTGTCGCCTAACTGCTCTGACATGGTGTTACCCGGGTTCGGCGTACGCGGTtcat                                <  2:1005678/136‑1 (MQ=255)
                                                                                               tATCCCTGGTATGAATTGATAAGAAAAAACCCCGGAGCACGCCCCGGGGTTTTCGGTACAAATACAGTCATCTGATGCGGGAACTTACTTGTCGCCTAACTGCTCTGACATGGTGTTACCCGGGTTCGGCGTACGCGGTtcat                                <  1:949262/143‑1 (MQ=255)
                                                                                                  cccTGGTATGAATTGATAAGAAAAAACCCCGGAGCCCGCCCCGGCTTTTCCGCTGCAAATACAGTCATCTGATGCGGGAACTTACTTGTCGCCTAACTGCTCTGACATGGTGTTACCCGGGTTCGGCGTACGCGGTTCATCaa                             <  1:246360/143‑1 (MQ=255)
                                                                                                    cTGGTATGAATTGATACGAAAAAACCCCGGAGCACGCCCCGGGGTTTTCGGTACAAATACAGTCATCTGAGGCGGGAACTTACTTGTCGCCTAACTGCTCTGACATGGTGTTACCCGGGCTCGGCGTACGGGGGTCATCAAcc                           >  2:705619/1‑143 (MQ=255)
                                                                                                          tacaTTGATTAGACAAAACCGCTGAGCTCGCCCTGGGTTTTTCTGTACAATTACAGTCATCTGATGCGTGAACTTACTTGTCGCCTAACTGCTCTGACATGGTGTTACCCGGGTTCGGCGTACGCTGTTCATCAACCGGACga                     <  2:406044/140‑1 (MQ=255)
                                                                                                          tGAATTGATAAGAAAAAACCCCGGAGCACGCCCCGGGGTTTTCGGTACAAATACAGTCATCTGATGCGGGAACTTACTTGTCGCCTAACTGCTCTGACATGGTGTTACCCGGGTTCGGCGTACGCGGTTCATCAACCGGACga                     >  1:360516/1‑143 (MQ=255)
                                                                                                           gAATTGATAAGAAAAAACCCCGGCGCACGCCCCGGGGTTTTCGGTACAAATACAGTCATCTGATGCGGGAACTTACTTGTAGCCTAACTGCTCTGACATGGTGTTACCCGGGTTCGGCGTACGCGGTTCATCAACCGGACgag                    >  1:1040097/1‑143 (MQ=255)
                                                                                                           gAATTGATAAGAAAAAACCCCGGAGCACGCCCCGGGGTTTTCGGTACCAATAAAGTCCCGTCAGTCGGGAAATTAATTGTCGCCTAACTGCTCTGACATGGTGTTACCCGGGTTCGGCGTACGCGGTTCATCAACCGGACgag                    >  1:459884/1‑143 (MQ=255)
                                                                                                            aaTTGATAAGAAAAAACCCCGGAGCACGCCCCGGGGTTTTCGGTACAAATACAGTCATCTGATGCGGGAACTTACTTGTCGCCTAACTGCTCTGACATGGTGTTACCCGGGTTCGGCGTACGCGGTTCATCAACCGGACgagg                   >  1:466661/1‑143 (MQ=255)
                                                                                                                 aTAAGAAAAAACCCCGGAGCACGCCCCGGGGTTTTCGGTACAAATACAGTCATCTGATGCGGGAACTTACTTGTCGCCTAACTGCTCTGACATGGTGTTACCCGGGTTCGGCGTACGCGGTTCATCAACCGGACGCGGCGCCt              >  2:369870/1‑143 (MQ=255)
                                                                                                                 aTAAGAAAAAACCCCGGAGCACGCCCCGGGGTTTTCGGTACAAATAAAGTCATCTGATGCGGGAACTTACTTGTCGCCTAACTGCTCTGACATGGTGTTACCCGGGTTCGGCGTACGCGGTTCATCAACCGGACGAGGAGACt              >  1:365384/1‑143 (MQ=255)
                                                                                                                   aaGAAAAAACCCCGGAGCACGCCCCGGGGTTTTCGGTACAAATACAGTCATCTGATGCGGGAACTTACTTGTCGCCTAACTGCTCTGACATGGTGTTACCCGGGTTCGGCGTACGCGGTTCATCAACCGGACGGGGAGCCttt            >  1:476808/1‑143 (MQ=255)
                                                                                                                     gAAAAAACCCCAGAGCACGCCCCGGGGTTTTCGGTACAAATACAGTCATCTGATGCGGGAACTTACTTGTCGCCTAACTGCTCTGACATGGTGTTACCCGGGTTCGGCGTACGCGGTTCATCAACCGGACGAGGAGCCTTTgg          >  2:912581/1‑143 (MQ=255)
                                                                                                                      aagtcggcccGGCGCTCGCCCCTGAGGTTTCGGTACACAGACAGTCATCTGATGCGGGAACTTACTGGTCGCCTAACTGCTCTGACATGGTGTTACCCGGGTTCGGCGTACGCGGTTCATCAACCGGACGAGGAGCCTTTGGa         <  2:113616/136‑1 (MQ=255)
                                                                                                                      aaaaaaCCCCGGAGCACGCCCCGGGGTTTTCGGTACAAATACAGTCATCTGATGCGGGAACTTACTTGTCGCCTAACTGCTCTGACATGGTGTTACCCGGGTTCGGCGTACGCGGTTCATCAACCGGACGAGGAGCCTTTGGa         <  1:630592/143‑1 (MQ=255)
                                                                                                                             cccGGAGCACGCCCCGGGGTTTTCGGTACAAATACAGTCATCTGATGCGGGAACTTACTTGTCGCCTAACTGCTCTGACATGGTGTTACCCGGGTTCGGCGTACGCGGTTCATCAACCGGACGAGGAGCCTTTGGACTACCAt  >  2:961268/1‑143 (MQ=255)
                                                                                                                                 |                                                                                                                                          
ATCCGAAAAGGAATCAGGCGTGACGTTGAGGATCCCCATTACGTGAGGATGGCTAAGGTCCAGTGAAGTACCCTGGGCAAAGAGTTTCATGATGTTATCCCTGGTATGAATTGATAAGAAAAAACCCCGGAGCACGCCCCGGGGTTTTCGGTACAAATACAGTCATCTGATGCGGGAACTTACTTGTCGCCTAACTGCTCTGACATGGTGTTACCCGGGTTCGGCGTACGCGGTTCATCAACCGGACGAGGAGCCTTTGGACTACCAT  >  NC_000913/3324822‑3325089

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.