New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 1097007 =79 (1.110)5 (0.070) 4/276 9.9 6.1% intergenic (+178/+558) ycdU/serX putative inner membrane protein/tRNA‑Ser
?NC_000913 1097172 = NA (NA)intergenic (+343/+393) ycdU/serX putative inner membrane protein/tRNA‑Ser
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

TTCTGTACTCTCTTGCGCATTTTGATTGTTGACTGAGTAACCAGACAGTTGATGTGCACGATTTCCCCTCGCCCTAACAGACGTGGGCGGGGGCACCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTGACTCGCTTCGCTCGCCCTGCGGGCAGCCCGCTCACTGCGTTCACGGTCTGTCCAACTGGCTGTCGCCAGTTGTCGACCCCCGGTCGGGGCTTCTCATCCCCCCGGTG  >  NC_000913/1096866‑1097148
                                                                                                                                             |                                                                                                                                              
ttCTGTACTCTCTTGCGCATTTTGATTGTTGACTGAGTAACCAGACAGTTGATGTGCACGATTTCCCCTCGCCCTAACAGACGTGGGCGGGGGCACCCGGTGTGTGCAATATACGAAACAAAAGCCCGTACTTTCGTACGAGc                                                                                                                                               >  2:19732/1‑143 (MQ=255)
ttCTGGACTGTCGTGCGCATTTTGATTGTTGACTGAGTAACCAGACAGTTGATGTGCACGATTTCCCCTCGCCCTAACAGACGTGGGCGGGGGCACCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGc                                                                                                                                               <  2:197818/143‑1 (MQ=255)
   tGTACTCTCTTGCGCATTTTGATTGTTGACTGAGTAACCAGACAGTTGATGTGCACGATTTCCCCTCGCCCTAACAGACGTGGGCGGGGGCACCCGGTGTGTGCAATGTACGAAGAAAAAGCCCGTACTTTCGTACGATctct                                                                                                                                            >  1:120804/1‑143 (MQ=255)
    ggaCTCTCTTTCGCATTTTGAGTGTTGATTGAGTAACCAGACAGTTGATGTGCACGATTTCCCCTCGCCCTAACAGACGTGGGCGGGGGCACCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCtctt                                                                                                                                           <  1:930629/141‑1 (MQ=255)
    gTACTCTCTTGCGCATTTTGATTGTTGACTGAGTAACCAGACAGTTGATGTGCACGATTTCCCCTCGCCCTAACAGACGTGGGCGGGGGCAGCCGGTGTGTGCAATATACTAAAAAAAAGCCCGTACTTTCGTACGAGCtctt                                                                                                                                           <  2:674015/143‑1 (MQ=255)
     tACTCTCTTGCGCATTTTGATTGTTGACTGAGTAACCAGACAGTTGATGTGCACGATTTCCCCTCGCCCTAACAGACGTGGGCGGGGGCACCCGGTGTGTGCACTATACGAAAAAAAAGCCCGTACTGTCGTACGAGCtcttc                                                                                                                                          >  2:555752/1‑143 (MQ=255)
     tACTCTCTGGCGCATTTTGCTTGTTGACTGAGTACCCAGACAGTTGATGTGCACGATTTCCCCTCGCCTTAACAGACGTGGGCGGGGGCACCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCtcttc                                                                                                                                          <  2:178921/143‑1 (MQ=255)
      aCTCTCTTGCGCATTTTGATTGTTGACTGAGTAACCAGACAGTTGATGTGCAAGATTTCCCCCCGCCCTAACAGACGTGGGCGGGGGCACCCGGTGTGTGCAATATACGAACAAACAGCCCGTACTTTCGTACGAGCtcttct                                                                                                                                         >  1:240115/1‑143 (MQ=255)
        tctctTGCGCATTTTGATTGTTGACTGAGTACCAGACCGTTTATGTGCACGATTTTCCCTCGCCCCAACAGGCGTTGGCGGGGGCCCCCCGTGGTTGCAATTTACGCAAAAAAAGCCCGGTCTTTCGGACGAGGTCTTCtttc                                                                                                                                      >  2:245177/1‑142 (MQ=255)
           ctTGCGCATTTTGATTGTTGACTGAGTAACCAGACAGTTGATGTGCACGATTTCCCCTCGCCCTAACAGACGTGGGCGGGGGCACCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTaaa                                                                                                                                    <  1:1191082/143‑1 (MQ=255)
               cgcATTTTGATTGTTGACTGAGTAACCAGACAGTTGATGTGCACGATTTCCCCTCGCCCTAACAGACGTGGGCGGGGGCACCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATg                                                                                                                                >  2:1242234/1‑143 (MQ=255)
                gcATTTTGATTGTTGACTGAGTAACCAGACAGTTGATGTGCACGATTTCCCCTCGCCCTAACAGACGTGGGCGGGGGCACCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATgg                                                                                                                               <  2:652584/143‑1 (MQ=255)
                  aTTTTGATTGTTGACTGAGTAACCAGACAGTTGATGTGCACGATTTACCCTCGCCCTAACAGACGTGGGCGGGGGCACCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCCCTTCTTTAAATATGGCg                                                                                                                             >  1:1163358/1‑143 (MQ=255)
                     ttGATTGTTGACTGAGTAACCAGACAGTTGATGTGCACGATTTCCCCTCGCCCTAACAGACGTGGGCGGGGGCACCCGGTGTGTGCCATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTg                                                                                                                          >  2:883171/1‑143 (MQ=255)
                      tGATGGTTGACTGAGTAACCAGACAGTTGATGGGCACGATTTCCGCTCGCCCTAGCAGGGGTGGGCGGGGGCACCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGa                                                                                                                         <  1:942802/143‑1 (MQ=25)
                         ttgttgACTGAGTAACCAGACAGTTGATGTGCACGATTTCCCCTCGCCCTAACAGACGTGGGCGGGGGCACCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAggg                                                                                                                     >  1:577181/1‑143 (MQ=255)
                           gttgACTGAGGAACCAGACAGTTGATGTGCACGATTTCCCCTCGCCCTAACAGACGTGGGCGGGGGCACCGCGTGTGTGCAATATCCGACAAACAGGCCCGTACTGTCGACCGAGCTCGTCCTTCAATATGGAGGtacacgga                                                                                                                    >  2:167754/1‑136 (MQ=255)
                               aCTGAGTAACCAGACAGTTGATGTGCACGATTTCCCCTCGCCCTAACAGACGTGGGCGGGGGCACCCGGTGTGTGCAATCTACGAAAAAACAGCCCGTACTTTCGTACCAGCTCTCCTTTCCATACGGCGCTGAgcggccggc                                                                                                               >  1:1100232/1‑138 (MQ=255)
                                cTGAGTAACCAGACAGTTGATGTGCACGATTTCCCCTCGCCCTAACAGACGTGGGCGGGGGCACCCGGTGTGGGCAATATACGAAAAAAAAGCCCGTACGTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGAtt                                                                                                              <  2:899134/143‑1 (MQ=255)
                                 tGAGTAACCAGACAGTTGATGTGCACGCTTTCCGCTCGCCATAACAGCCGTGGGCGGGGGCCCCCGGTGGGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGATTGa                                                                                                            <  2:980317/143‑1 (MQ=21)
                                 tGAGTAACCAGACAGTTGATGTGCACGATTTCCCCTCGCCCTAACAGACGTGGGCGGGGGCACCCGGTGTGTGCAATATACGAAAACACAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGAGGTGAGGGGGGGAGTg                                                                                                             >  1:208606/1‑143 (MQ=255)
                                 tGAGTAACCAGACAGTTGATGTGCACGATTTCCCCTCGCCCTAACAGACGTGGGCGGGGGCACCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTg                                                                                                             >  1:750818/1‑143 (MQ=255)
                                 tGAGTAACCAGACAGTTGATGTGCACGATTTCCCCTCGCCCTAACAGACGTGGGCGGGGGCACCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGCGAGGAGGGGAttt                                                                                                             >  2:577145/1‑142 (MQ=255)
                                  gagcacccAGACAGTTGCTGTGCACGCGTTCCCCTCGCCCTAACAGACGTGGGCGGGGGCACCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTCCTTTCGTACGCGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTGa                                                                                                            <  1:1098369/137‑1 (MQ=21)
                                  gAGTAACCAGACAGTTGATGTGCACGATTTCCCCTCGCCCTAACAGACGTGGGCGGGGGCACCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGGGCTCTTCTTTAAATATGGCGGTGAGGGGGGGAGTGa                                                                                                            >  1:967834/1‑143 (MQ=255)
                                  agggaaCCAGACAGTGAATGGGAACGATTGCCCCTCGCCCTAACAGACGTGGGCGGGGCCACCCGGGGGGTGCAAGATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTGa                                                                                                            <  1:149452/139‑1 (MQ=18)
                                   aGTAACCAGACAGTTGATGTGCACGATTTCCCCTCGCCCTAACAGACGTGGGCGGGGGCACCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTGAc                                                                                                           >  1:254912/1‑143 (MQ=255)
                                    gTACCCACACAGTTGATGTGCGCGATTTCCCCTCGCCCTAACAGACGTGGGCGGGGGCACCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTATATAATTTTTTCGGTGAGGGGGGGATTGACt                                                                                                          <  2:1132380/143‑1 (MQ=21)
                                    gTAACCAGACAGTTGATGTGCACGATTTCCCCTCGCCCTAACAGACGTGGGCGGGGGCACCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTACTTCTGGCTGTGAGGGGGGGATTGACt                                                                                                          <  2:1132391/143‑1 (MQ=255)
                                        ccAGACAGTTGATGTGCACGATTTCCCCTCGCCCTAACAGACGTGGGCGGGGGCACCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTGACtcgct                                                                                                      >  1:243820/1‑143 (MQ=255)
                                         cAGACAGTTGATGTGCACGATTTCCCCTCGCCCTAACAGACGTGGGCGGGGGCACCCGGTGTGTGCAATATACGCAAAAAAAGCCAGTACTTTCGTACGAGCGCTTGTTTAAATATGGCGGGGAGGGGGGGCTTGACtcgcct                                                                                                     >  2:17058/1‑141 (MQ=21)
                                           gACAGTTGATGTGCTCGATTTCTCCACGCTCGACGAGACCTGAGCGGGGGCACCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTGAATATGGCTGTGATGGGGGGATTGACtcgcttcg                                                                                                   <  2:577181/143‑1 (MQ=17)
                                            aCAGTTGATGTGCACGATTTCCCCTCGCCCTAACAGACGTGGGCGGGGGCACCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCGCTCCTTTAAATATGGCGGTGAGGGGGGGATTGTctcgcctcgc                                                                                                  >  1:1222964/1‑143 (MQ=255)
                                              aGTTGATGTGCACGATTTCCCCTCGCCCTAACAGACGTGGGCGGGGGCACCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTGACTCGCTtcgctc                                                                                                >  1:1152643/1‑143 (MQ=255)
                                               gTTGATGTGCACGATTTCCCCTCGCCCTAACAGACGTGGGCGGGGGCACCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTGACTCGCTtcgctcg                                                                                               >  2:246228/1‑143 (MQ=255)
                                                ttGATGGGCACGATTTCCCCTCGCCCTGCCAGCCGTGGGCGGGGGCACCCGGAGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTGACTCGCTtcgctcgc                                                                                              <  2:968187/143‑1 (MQ=18)
                                                   aTGTGCACGATTTCCCCTCGCCCTAACAGACGTGGGCGGGGGCACCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTGACTCGCTtcgctcggtct                                                                                           >  1:581991/1‑139 (MQ=255)
                                                   aTGTGCACGATTTCCCCTCGCCCTAACAGACGTGGGCGGGGGCACCCGGGGTGTGCAATATACGCAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTCAATGTGGCGGTGAGGGGGGGATGGAGTCGCTTCGGTCGCGCt                                                                                           >  1:944225/1‑143 (MQ=21)
                                                   aTGTGCACGAGTTCCCCGTGACCTAACAGACGCGGGCGGGGGCTCCCGGTGTGCGAAATATACGAAAAAAAAGCCCGTTCTTTCGTACGAGCTCTTCTTTAGAGATGGCGGTGAGGGGGGGATTGACTCGCTTCGCTCGCCCt                                                                                           <  2:858816/143‑1 (MQ=17)
                                                     gtgCACGAGCTCCCCTCTCCCTAACAGACGGGGGCGGGGCGACCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAAGATGGCGGTGAGGGGGGGATTGACTCGCTTCGCTCGCCCTGc                                                                                         <  2:277387/143‑1 (MQ=17)
                                                      tgtaCGATTTCCCCTCGCCCTAACAGACGTGGGCGGGGGCACCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGGGAGGGGGGGGTTGCCTCGCCTCGCTCGGCCTGCg                                                                                        >  1:390074/4‑143 (MQ=18)
                                                      tgCACGATTTCCCCTCGCCCTAACAGACGTGGGCGGGGGCACCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTGACTCGCTTCGCTCGCCCTGCg                                                                                        >  1:774297/1‑143 (MQ=255)
                                                      tgCACGATTTCCCCTCGCCCTAACAGACGTGGGCGGGGGCACCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGTTGGCCCGCTTCGCTCGCCCTGCgg                                                                                       >  1:98511/1‑143 (MQ=255)
                                                      tgCACGATTTCCCCTCGCCCTAACAGACGTGGGCGGGGGCACCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATAGGGCGGTGAGGGGGGGGTTGCCTCGCTTCGCTGGCCCTGCg                                                                                        >  1:12382/1‑143 (MQ=255)
                                                      tgCACGATGTCCCCTCGCCCTAACACACGTGGGCGGGGTCACCGAGGGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTGACTCGCTTCGCTCGCCCTGCg                                                                                        <  2:615869/143‑1 (MQ=17)
                                                       gCACGATTTCCCCTCGCCCTAACAGACGTGGGCGGGGGCACCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTGACTCGCTTCGCTCGCCCTGCgg                                                                                       <  1:1225662/143‑1 (MQ=255)
                                                             tttCCCCTCGCCCTAACAGACGTGGGCGGGGGCACCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGCTTGACTCGCTTCGCTCGCCCCGCGGGCAGcc                                                                                 >  2:494012/1‑143 (MQ=255)
                                                             tttCCCCTCGCCCTAACAGACGTGGGCGGGGGCACCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTGACTCGCTTCGCTCGCCCTGCGGGCAGcc                                                                                 >  2:745498/1‑143 (MQ=255)
                                                             tctCCACTCGCCCTAACAGACGTGGGCGGGGGCACCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTGACTCGCTTCGCTCGCCCTGCGGGCAGcc                                                                                 <  1:921272/141‑1 (MQ=255)
                                                              ttCCCCTCGCCCTAACAGACGTGGGCGGGGGCACCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTGACTCGCTTCGCTCGCCCTGCGGGCAGccc                                                                                >  2:651249/1‑143 (MQ=255)
                                                                     cGCCCTAACAGACGTGGGCGGGGGCACCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTGACTCGCTTCGCTCGCCCTGCGGGCAGCCCGCTCACt                                                                         <  1:409172/143‑1 (MQ=255)
                                                                          tAACAGACGTGGGCGGGGGCACCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGAGAGGGGGGGATTGACTCGCTTCGCTCGCCCTGCCGGCACCCCGCCCAcgacgat                                                                    >  2:817953/1‑137 (MQ=14)
                                                                           aaCAGACGTGGGCGGGGGCACCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTGa                                                                                                            >  1:224826/1‑102 (MQ=255)
                                                                           aaCAGACGTGGGCGGGGGCACCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTGa                                                                                                            <  2:224826/102‑1 (MQ=255)
                                                                              aGACGTGGGCGGGGGCACCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTGACTCGCTTCGCTCGCCCTGCGGGCAGCCCGCTCACTGCGTTCACg                                                                >  2:532630/1‑143 (MQ=255)
                                                                              aGACGGCGGCGGGGGCACCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTGACTCGCTTCGCTCGCCCTGCGGGCAGCCCGCTCACTGCGTTCACg                                                                <  1:1211203/143‑1 (MQ=255)
                                                                               gACGTGGGGGGGGGCACCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTATGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGGATTGACTCGCTTCGCTCGCCCTGCGGGCAGCCCGCTCACTGCGTTCACg                                                                <  1:1195366/143‑1 (MQ=255)
                                                                               gACGTGGGGGGAGGCACCCGGGGGGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTGACTCGCTTCGCTCGCCCTGCGGGCAGCCCGCTCACTGCGTTCACgg                                                               <  1:795075/143‑1 (MQ=255)
                                                                                  gggggCGGGGGCGCCCGGTGTTGGGAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTGACTCGCTTCGCTCGCCCTGCGGGCAGCCCGCTCACTGCGTTCACGGTCt                                                            <  2:389913/141‑1 (MQ=255)
                                                                                  gTGGGCGGGGGCACCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTGACTCGCTTCGCTCGCCCTGCGGGCAGCCCGCTCACTGCGTTCACGGTCt                                                            <  1:246228/143‑1 (MQ=40)
                                                                                  gTGGGCGGGGGCAACCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTGACTCGCTTCGCTCGCCCTGCGGGCAGCCCGCTCACTGCGTTCACGGTCt                                                            <  1:891285/143‑1 (MQ=38)
                                                                                   tGGGCGGGGGCACCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTGACTCGCTTCGCTCGCCCTGCGGGCAGCCCGCTCACTGCGTTCACGGTCTg                                                           >  1:869733/1‑143 (MQ=39)
                                                                                     ggCGGGGGCACCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTGACTCGCTTCGCTCGCCCTGCGGGCAGCCCGCTCACTGCGTTCACGGTCTGTc                                                         <  1:510837/143‑1 (MQ=38)
                                                                                           ggCACCTGGTGTGGGCAATATACGGAGTAATGGCCCGTCATTTAGTACGAGCGCTTCTTTAAATATGGCGGTGAGGGGGGGATTGACTCGCTTCGCTCGCCCTGCGGGCAGCCCGCTCACTGCGTTCACGGTCTGTCCAACTg                                                   <  2:967834/143‑1 (MQ=11)
                                                                                           ggCACCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCg                                                                                                                             >  1:781838/1‑70 (MQ=37)
                                                                                             cACCGGGGGTGTGCAATATACGAAAAAAAGGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGTTGACTCGCTTCGCTCGCCCTGCGGGCAGCCCGCTCACTGCGTTCACGGTCTGTCCAACTGGCt                                                <  2:98511/143‑1 (MQ=255)
                                                                                                               taCGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTGACTCGCTTCGCTCGCCCTGCGGGCAGCCCGCTCACTGCGTTCACGGTCTGTCCAACTGGCTGTCGCCAGTTGTCGAcc                               >  1:565265/1‑143 (MQ=31)
                                                                                                                  gAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTGACTCGCTTCGCTCGCCCTGCGGGCAGCCCGCTCACTGCGTTCACGGTCTGTCCAACTGGCTGTCGCCAGTTGCCGAccccc                            >  2:244337/1‑143 (MQ=17)
                                                                                                                   aaaaaaaaGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTGCCTCGCTTCGCTCGCCCTGCGGGCAGCCCGCTCACTGCGTTCACGGTCTGTCCAACTGGCTGTCGCCAGTTGTCGACCCCCg                           <  1:17058/143‑1 (MQ=17)
                                                                                                                     aaaaaaGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTGACTCGCTTCGCTCGCCCTGCGGGCAGCCCGCTCACTGCGTTCACGGTCTGTCCAACTGGCTGTCGCCAGTTGTCGACCCCCGGt                         >  1:1033538/1‑143 (MQ=32)
                                                                                                                         aaGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTGACTCGCTTCGCTCGCCCTGCGGGCAGCCCGCTCACTGCGTTCACGGTCTGTCCAACTGGCTGTCGCCAGTTGTCGACCCCCGGTCggg                     <  1:19732/143‑1 (MQ=32)
                                                                                                                           gCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTGACTCGCTTCGCTCGCCCTGCGGGCAGCCCGCTCATTGCGTTCACGGTCTGTCCAACTGGCTGTCGCCAGTTGTCGACCCCCGGTCGGGGc                   >  1:804481/1‑143 (MQ=17)
                                                                                                                             ccGTACTCGCCTACCGGCTCTTCTCTCAATAGTGCGGTGCGGCGGCGATTGACTCCCTTCGCCCGCCCTGCGGGCAGCTCGCTCACTGCCTTCACGGTCTGTCCAACTGGCTGTCGCCAGTTGTCGACCCCCGGTCGGGGCtt                 <  1:857626/143‑1 (MQ=11)
                                                                                                                              cGTACCTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTGACTCGCTTCGCTCGCCCTGCGGGCAGCCCGCTCACTGCGTTCACGGTCTGTCCAACTGGCTGTCGCCAGTTGTCGACCCCCGGTCGGGGCTtc                <  1:1242234/143‑1 (MQ=17)
                                                                                                                                tACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTGACTCGCTTCGCTCGCCCTGCGGGCAGCCCGCTCACTGCGTTCACGGTCTGTCCAACTGGCTGTCGCCAGTTGTCGACCCCCGGTCGGGGCTtctc              <  2:869733/143‑1 (MQ=32)
                                                                                                                                  ctgtCGTACGGGCTCTTCTTTAAGTATGGCGGTGGGGGGGGGATTGAGTCGCTTCGCTCGCCCTGCGGGCAGCCCGCGCACTGCGTTCACGGTCTGTCCAACTGGCTGTCGCCAGTTGTCGACCCCCGGTCGGGGCTTCTCAt            <  2:977888/140‑1 (MQ=11)
                                                                                                                                  cTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTGACTCGCTTCGCTCGCCCTGCGGGCAGCCCGCTCACTGCGTTCACCGTCTGTCCCACTGGCTGTCGCCACCCGTCCACCCCCGGCCGCGGCCtcccct            >  1:480751/1‑139 (MQ=11)
                                                                                                                                     tCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTGACTCGCTTCGCTCGCCCTGCGGGCAGCCCGCTCACTGCGTTCACGGTCTGTCCAACTGGCTGTCGCCAGTTGTCGACCCCCGGTCGGGGCTTCTCATccc         <  2:243820/143‑1 (MQ=32)
                                                                                                                                     ccggaCGAGCTCTTCTTTCAATGTGGCGGTGAGGGGGGGATTGACTCGCTTCGCTCGCCCTGCGGGCAGCCCGCTCACTGCGTTCACGGTCTGTCCAACTGGCTGTCGCCAGTTGTCGACCCCCGGTCGGGGCTTCTCATccc         <  2:859373/139‑1 (MQ=12)
                                                                                                                                           gAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTGACTCGCTTCGCTCGCCCTGCGGGCAGCCCGCTCACTGCGTTCACGGTCTGTCCAACTGGCTGTCGCCAGTTGTCGACCCCCGGTCGGGGCTTCTCATCCCCCCGgt   <  1:532630/143‑1 (MQ=32)
                                                                                                                                            ggCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTGACTCGCTTCGCTCGCCCTGCGGGCAGCCCGCTCACTGCGTTCACGGTCTGTCCAACTGGCTGTCGCCAGTTGTCGACCCCCGGTCGGGGCTTCTCATCCCCCCGgtg  <  1:256652/142‑1 (MQ=17)
                                                                                                                                             |                                                                                                                                              
TTCTGTACTCTCTTGCGCATTTTGATTGTTGACTGAGTAACCAGACAGTTGATGTGCACGATTTCCCCTCGCCCTAACAGACGTGGGCGGGGGCACCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTGACTCGCTTCGCTCGCCCTGCGGGCAGCCCGCTCACTGCGTTCACGGTCTGTCCAACTGGCTGTCGCCAGTTGTCGACCCCCGGTCGGGGCTTCTCATCCCCCCGGTG  >  NC_000913/1096866‑1097148

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.