New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 1104930109 (1.530)3 (0.050) 3/264 10.3 2.9% intergenic (+28/‑31) csgA/csgC curlin subunit, amyloid curli fibers, cryptic/curli assembly protein
?NC_000913 = 1104934 102 (1.530)intergenic (+32/‑27) csgA/csgC curlin subunit, amyloid curli fibers, cryptic/curli assembly protein
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

Only 100 of 109 total aligned reads displayed.

AAACAGTTCGGTGGTGGCAACGGTGCTGCAGTTGACCAGACTGCATCTAACTCCTCCGTCAACGTGACTCAGGTTGGCTTTGGTAACAACGCGACCGCTCATCAGTACTAATACATCATTTGTATTACAGAAACAGGGC‑GCAAGCCCTGTTTTTTTTCGGGAGAAGAATATGAATACGTTATTACTCCTTGCGGCACTTTCCAGTCAGATAACCTTTAATACGACCCAGCAAGGGGATGTGTATACCATTATTCCTGAAGTCACTCTTACTCAATCTTGTC  >  NC_000913/1104792‑1105072
                                                                                                                                               |                                                                                                                                          
aaaCAGTTCGGTGGTGGCAACGGTGCTGCAGTTGACCAGACTGCATCTAACTCCTCCGTCAACGTGACTCAGGTTGGCTTTGGTAACAACGCGACCGCTCATCAGTACTAATACATCATTTGTATTACAGAAACAGGGC‑GCaa                                                                                                                                            <  1:607705/143‑1 (MQ=255)
 aaCAGTTCGGTGGTGGCAACGGTGCTGCAGTTGACCAGACTTCATCTAACTCCTCCGTCAACGTGACTCAGGTTGGCTTTGGTAACAACGCGACCGCTCATCAGTACTAATACATCATTTGTATTACAGAAACAGGGC‑GCAAg                                                                                                                                           >  1:348029/1‑143 (MQ=255)
    aGTTCGGTGGTGGCAACGGTGCTGCAGTTGACCAGACTGCATCTAACTCCTCCGTCAACGTGACTCAGGTTGGCTTTGGTAACAACGCGACCGCTCATCAGTACTAATACATCATTTGTATTACAGAAACAGGGC‑GCAAGccc                                                                                                                                        <  1:971557/143‑1 (MQ=255)
      ttCGGTGGTGGCAACGGTGCTGCAGTTGACCAGACTGCATCTAACTCCTCCGTCAACGTGACTCAGGTTGGCTTTGGTAACAACGCGACCGCTCATCAGTACTAATACATCATTTGTATTACAGAAACAGGGC‑GCAAGCGCTg                                                                                                                                      >  2:301278/1‑143 (MQ=255)
        cGGTGGTGGCGACGGTGCTGCAGTTGACCAGACTGCATCTAACTCCTCCGTCAACGTGACTCAGGTTGGCTTTGGTAACAACGCGACCGCTCATCAGTACTAATACATCATTTGTATTACAGAAACAGGGC‑GCAAGCCCTGtt                                                                                                                                    <  2:1042588/143‑1 (MQ=255)
         ggtggtGGCAACGGTGCTGCAGTTGACCAGACTGCATCTAACTCCTCCGTCAACGTGACTCAGGTTGGCTTTGGTAACAACGCGACCGCTCATCAGTACTAATACATCATTTGTATTACAGAAACAGGGC‑GCAAGCCCTGttt                                                                                                                                   <  1:603373/143‑1 (MQ=255)
              tggAAACGGAGCAGCAGTAGACCAGACTGCATCTAACTCCTCCGCCAACGAAACTCATGTGTGCTTTGGCAACAACGCGACCGCTCATCAGTACTAATACATCATTTGTATTACAGAAACAGGGC‑GCAAGCCCTGtttttttt                                                                                                                              <  1:590441/143‑1 (MQ=255)
               ggCAACGGTGCTGCAGTTGACCAGACTGCATCTAACTCCTCCGTCAACGTGACTCAGGTTGGCTTTGGTAACAACGCGACCGCTCATCAGTACTAATACATCATTTGTATTACAGAAACAGGGC‑GCAAGCCCTGTTTTTTTTc                                                                                                                             <  2:1288566/143‑1 (MQ=255)
                gccaCGGGGCTGCGGTTGACCGTACTGCATTTTACTCCTCCGTGACCGTGAGTCAGGTTGGCTTTGGTAACATCGCGACTGCTCATCAGTTCTAAGACATCTGTTGTTTTACAGAAACAGGGC‑GCAAGCCCTGTTTTTTTTCg                                                                                                                            <  2:340343/140‑1 (MQ=255)
                gCAACGGTGCTGCAGTTGACCAGACTGCATCTAACTCCTCCGTCAACGTGACTCAGGTTGGCTTTGGTAACAACGCGACCGCTCATCAGTACTAATACATCATTTGTATTACAGAAACAGGGC‑GCAAGCCCTGTTTTTTTTCg                                                                                                                            >  2:663408/1‑143 (MQ=255)
                gCAACGGTGCTGCAGTTGACCAGACTGCATCTAACTCCTCCGTCAACGTGACTCAGGTTGGCTTTGGTAACAACGCGACCGCTCATCAGTACTAATACATCATTTGTATTACAGAAACAGGGC‑GCAAGCCCTGTTTTTTTTCg                                                                                                                            <  1:928943/143‑1 (MQ=255)
                 cAACGGTGCTGCAGTTGACCAGACTGCATCTAACTCCTCCGTCAACGTGACTCAGGTTGGCTTTGGTAACAACGCGACCGCTCATCAGTACTAATACATCATTTGTATTACAGAAACAGGGC‑GCAAGCCCTGTTTTTTTTCgg                                                                                                                           <  2:1134884/143‑1 (MQ=255)
                  aaCGGTGCTGCAGTTGACCAGACTGCATCTAACTCCTCCGTCAACGTGACTCAGGTTGGCTTTGGTAACAACGCGACCGCTCATCAGTACTAATACATCATTTGTATTACAGAAACAGGGC‑GCAAGCCCTGTTTTTTTTCggc                                                                                                                          >  2:822520/1‑142 (MQ=255)
                   aCGGTGCTGCAGTTGACCAGACTGCATCTAACTCCTCCGTCAACGTGACTCAGGTTGGCTTTGGTAACAACGCGACCGCGCATCAGTACTAATACATCATTTGTATTACAGAAACAGGGC‑GCAAGCCCTGTTTTTTTTCGGga                                                                                                                         <  1:1012994/143‑1 (MQ=255)
                      gTGCTGCACGTGACCAGACTGCAGCTAACGCCTCCGTCAACGTGCCTCAGATAGTCCTTGTTAACAACGCGACCGCTCATCAGTACTAATACATCATTTGTATTACAGAAACAGGGC‑GCAAGCCCTGTTTTTTTTCGGGagaa                                                                                                                      <  2:447529/143‑1 (MQ=255)
                         ctgcAGTTGACCAGACTGCATCTAACTCCTCCGTCAACGTGACTCAGGTTGGCTTTGGTAACAACGCGACCGCTCATCAGTACTAATACATCATTTGTATTACAGAAACAGGGC‑GCAAGCCCTGTTTTTTTTCGCGAgaagaa                                                                                                                   <  2:523061/143‑1 (MQ=255)
                           gcAGTTGACCAGACTGCATCTAACTCCTCCGTCAACGTGACTCAGGTTGGCTTTGGTAACAACGCGACCGCTCATCAGTACTAATACATCATTTGTATTACAGAAACAGGGC‑GCAAGCCCTGTTTTTTTTCGGGAGAAGAata                                                                                                                 <  1:955968/143‑1 (MQ=255)
                            aatttGACCCGACTGCATCTAACTCCACCGACAACGTGACTCAGGTTGGCTTTGGTAACAACGCGACCGCTCATCAGTACTAATACATCATTTGTATTACAGAAACAGGGC‑GCAAGCCCTGTTTTTTTTCGGGAGAAGAatat                                                                                                                <  2:1265793/140‑1 (MQ=255)
                             aGTTGTCCAGACGGCATCTATCTCCTCCGTCAACGTGACTCAGGTTGGCTTTGGTAACAACGCGACCGCTCATCAGTACTAATACATCATTTGTA‑TACAGAAACAGGGC‑GCAAGCCCTGTTTTTTTTCGGGAGAAGAATATGa                                                                                                              <  2:408071/143‑1 (MQ=255)
                              gTTGACCAGACTGCATCTAACTCCTCCGTCAACGTGACTCAGGTTGGCTTTGGTAACAACGCGACCGCTCATCAGTACTAATACATCATTTGTATTACAGAAACAGGGC‑GCAAGCCCTGTTTTTTTTCGGGAGAAGAATATGa                                                                                                              >  1:1105548/1‑143 (MQ=255)
                                tGACCAGACTGCATCTAACTCCTCCGTCAACGTGACTCAGGTTGGCTTTGGTAACAACGCGACCGCTCATCAGTACTAATACATCATTTGTATTACAGAAACAGGGC‑GCAAGCCCTGTTTTTTTTCGGGAGAAGAATATGAAt                                                                                                            <  2:930487/143‑1 (MQ=255)
                                    cAGACTGCATCTAACTCCTCCGTCAACGTGACTCAGGTTGGCTTTGGTAACAACGCGACCGCTCATCAGTACTAATACATCATTTGTATTACAGAAACAGGGC‑GCAAGCCCTGTTTTTTTTCGGGAGAAGAATATGAATACGt                                                                                                        >  1:984381/1‑143 (MQ=255)
                                       aCTGCATCTAACTCCTCCGTCAACGTGCCGCGAAATGGCTGTTTGAACAACGCGACCGCTCAGCAGTACTAATACAACTTTGCAATGACAGAAACAGTGC‑GCAATCCGTGCTTTATGTCGGTAGAAGAATATGAAAAcatcat                                                                                                     >  2:981310/1‑138 (MQ=255)
                                         tGCATCTAACTCCTCCGTCAACGTGACTCAGGTTGGCTTTGGTAACAACGCGACCGCTCATCAGTACTAATACATCATTTGTATTACCGAGACAGGGC‑GCAAGCCCTGTTTTTTTTCGGGAGAAGAGGATGTATACGtcatca                                                                                                   >  1:402165/1‑141 (MQ=255)
                                          gCATCTAACCCCTCCGGCACCGTGACTCAGGTTGGCTTTGGTAACAACGCGACCGCTCATCAGTACTAATACATCATTTGTATTACAGAAACAGGGC‑GCAAGCCCTGTTTTTTTTCGGGAGAAGAATATGAATACGTTATTAc                                                                                                  <  2:856648/143‑1 (MQ=255)
                                                aaCTCCTCCGTCAACGTGACTCAGGTTGGCTTTGGTAACAACGCGACAGATCATCAGAACTAATCTATATGAACTTTTTCTGAAACAGGGC‑GCAAGAACAGTTCTTTTTCGGGAGAGCAATATGAGTAAGtttttagtatttg                                                                                            >  2:1126662/1‑136 (MQ=255)
                                                  ctcctcCGTCAGCGTTACTCATGTTGGCTTTGGTAACAACGCGACCGCCCATCAGTACTAATCCATCATTTCTATTACAGAAACAGGGC‑GCAAGCCCTGTTTTTTTTCGGGAGAAGAATATGAATACGTTATTACTCCTTGCg                                                                                          <  2:343982/143‑1 (MQ=255)
                                                   tcctccGTCAACGTGACTCAGGTTGGCTTTGGTAACAACGCGACCGCTCATCAGTACTAATACATCATTTGTATTATAGAAACAGGGC‑GCAAGTCCTGTTTTTTTTCGGGAGAAGAATATGAATACATTATTACTACTTGAgg                                                                                         >  1:477133/1‑143 (MQ=255)
                                                   tcctccGTCAACGTGACTCAGGTTGGCTTTGGTAACAACGCGACCGCTCATCAGTACTAATACATCATTTGTATTACAGAAACAGGGC‑GCAAGCCCTGTTTTTTTTCGGGAGAAGAATATGAATACGTTATTACTCCTTGCgg                                                                                         <  2:461164/143‑1 (MQ=255)
                                                    cctccGTCAACGTGACTCAGGTTGGCTTTGGTAACAACGCGACCGATCATCAGTACTAATACATCATTTGTATTACAGAAACAGGGC‑GCAAGCCCTGTTTTTTTTCGGGAGAAGAATGTGAATACGTTATTACTCCTTGCAGc                                                                                        >  2:34160/1‑143 (MQ=255)
                                                    cctccGTCAACGTGACGCAGGTTGGCTTTGGTAACAACGCGACCGCTCATCAGTACTAATACATCATTTGAATTACAGAAACAGGGG‑GCAAGCCCGGTTGGTGTGCGGGAAAAGAGTATGAATAAGTCATTACTCAGTGCGGc                                                                                        >  2:616410/1‑143 (MQ=255)
                                                     ctccGTCAACGTGACTCAGGTTGGCTTTGGTAACAACGCGACCGCTCATCAGTACTAATACATCATTTGTATTACAGAAACAGGGC‑GCAAGCCCTGTTTTTTTTCGGGAGAAGAATATGAATACGTTATTACTCCTTGCGGCa                                                                                       <  2:433559/143‑1 (MQ=255)
                                                     ctccGTCAACGTGACTCAGGTTGGCTTTGGTAACAACGCGACCGCTCATCAGTACTAATACATCATTTGTATTACAGAAACAGGGC‑GCAAGCCCTGTTTTTTTTCGGGAGAAGAATATGAATACGTTATTACTCCTTGCGGCa                                                                                       <  2:532013/143‑1 (MQ=255)
                                                      tccGTCAACGTGACTCAGGTTGGCTTTGGTAACAACGCGACCGCTCATCAGTACTAATACATCACTTGAATTACAGAAACAGGGC‑GCAAGCCCTGTTTTTTTTCGGGAGAAGAATATGAATACGTTATTACTCCTTGCGGCAc                                                                                      >  1:1127729/1‑143 (MQ=255)
                                                        cGTCAACGTGACTCAGGTTGGCTTTGGTAACAACGCGACCGCTCATCAGTACTAATACATCATTTGTATTACAGAAACAGGGC‑GCAAGCCCTGTTTTTTTTCGGGAGAAGAATATGAATACGTTATTACTCCTTGCGGCACtt                                                                                    >  1:714971/1‑143 (MQ=255)
                                                        cGTCAACGTGACTCAGGTTGGCATTGATAACAACGCGACCGCTCACAAGTACTAATAAATCATTTGTATTACAGAAACAGGGC‑GCAAGCCCTGTTATTTTACGGGAAATGAATATGAATACGTTATTACTCCTTGCGGCACtt                                                                                    <  2:1056438/143‑1 (MQ=255)
                                                         gttaaCGTGACTCAGGTTGGCTTTTGTAACAACGCGACCGCTCATCAGTACTAATACATCATTTGTATTACAGAAACAGGGC‑GCAAGCCCTGTTTTTTTTCGGGAGAAGAATATGAATACGTTATTACTCCTTGCGGCACttt                                                                                   <  2:182199/140‑1 (MQ=255)
                                                          tCATCGTGACACAGGTTGGCTGGGGTAACAACGCGACCGCTCATCAGTACTAATACATCATTTGTATTACAGAAACAGGGC‑GCAAGCCCTGTTTTTTTTCGGGAGAAGAATATGAATACGTTATTACTCCTTGCGGCACTTTc                                                                                  <  1:468679/143‑1 (MQ=255)
                                                          tCAACGTGACTCAGGTTGTCTTTGGTAACAACGCGACCGCTCATCAGTACTAATACATCATTTGTATTACAGAAACAGGGC‑GCAAGCCCTGTTTTTTTTCGGGAGAAGAATATGAATACGTTATTACTCCTTGCGGCACTTTc                                                                                  <  2:356149/143‑1 (MQ=255)
                                                          tCAACGTGACTCAGGTTGGCTTTGGTAACAACGCGACCGCTCATCAGTACTAACACATCATTTGTATTACAGAAACAGGGC‑GCAAGCCCTGTTTTTTTTCGGGAGAAGAATATGAATACGTTATTACTCCTTGCGGCCCtctc                                                                                  >  1:10730/1‑143 (MQ=255)
                                                            actgttaCTCAGGTTGGCTTTGGTAACAACGCGACCGCTCATCAGTACTAATACATCATTTGTATTACAGAATCAGGGC‑GCAAGCCCTGTTTTTTTTCGGGAGAAGAATATGAATACGTTATTACTCCTTGCGGCACTTTCCa                                                                                <  2:972096/137‑1 (MQ=255)
                                                            aaCGTGACTCAGGTTGGCTTTGGTAACAACGCGACCGCTCATCAGTACTAATACATCATTTGTATTACAGAAACAGGGC‑GCAAGCCCTGTTTTTTTTCGGGAGAAGAATATGAATACGTTATTACTCCTTGCGGCACTTTCCa                                                                                <  2:195728/143‑1 (MQ=255)
                                                            aaCGTGACTCAGGTTGGCTTTGGTAACAACGCGACCGCTCATCAGTACTAATACATCATTTGTATTACAGAAACAGGGC‑GCAAGCCCTGTTTTTTTTCGGGAGAAGAATATGAATACGTTATTACTCCTTGCGGCACTTTCCa                                                                                <  1:281440/143‑1 (MQ=255)
                                                            aaCGTGACGCAGGAGGGCTTTGGTAACAACGCGACCGCTCATCAGTACTAATACATCATTTGTATTACAGAAACAGGGC‑GCAAGCCCTGTTTTTTTTCGGGAGAAGAATATGAATACGTTATTACTCCTTGCGGCACTTTCCa                                                                                <  1:145082/143‑1 (MQ=255)
                                                             aCGTGACTCAGGTTGGCTTTGGTAACAACGCGACCGCTCATCAGTACTAATACATCATTTGTATTACAGCAACAGGGC‑GCAAGCCCTGTTTTTTTTCGGGAGAAGAATATGAATACGTTATTACTCCATGCGGCACTTTCGAg                                                                               >  1:960438/1‑143 (MQ=255)
                                                              cGTGACTCAGGTTGGCTTGGGTAACAACGCGGCCGCTCATCAGTACTAATACATCATTTGTATTACAGAAACAGGGC‑GCAAGCCCTGTTTTTTTTCGGGAGAAGAATATGAATACGTTATTACTCCTTGCGGCACTTTCCAGt                                                                              >  1:901920/1‑143 (MQ=255)
                                                               gTGCCTCAGGTTGGCTTTGGTAACAACGCGACCGCTCCTCAGTACTAATACATCATTTGTATTACAGAAACAGGGC‑GCAAGCCCTGTTTTTTTTCGGGAGAAGAATATGAATACGTTATTACTCCTTGCGGCACTTTCCAGTc                                                                             <  1:629104/143‑1 (MQ=255)
                                                               gTGACTCATGGTGGCTTTGGTAACAACGCGACCGCTCATCATTTCTAATACATTATTTGTATTATAGAAACAGGGC‑GCAAGCCCTGTTTTTTTTCGGGAGAAGAATATGAATACGTTATTACTCCTTGCGGCACTTTCCAGTc                                                                             <  1:252500/143‑1 (MQ=255)
                                                               gTGACTCAGGTTGGCTTTGGTAACAACGCGACCGCTCATCAGTACTAATACATCATTTGTATTACAGAAACAGGGC‑GCAAGCCCTGTTTTTTTTCGGGAGAAGAATATGAATACGTTATTACTCCTTGCGGCACTTTCCAGTc                                                                             <  1:328588/143‑1 (MQ=255)
                                                               gTGACTCAGGTTGGCTTTGGTAACAACGCGACCGCTCATCAGTACTAATACATCATTTGTATTACAGAAACAGGGC‑GCAAGCCCTGTTTTTTTTCGGGAGAAGAATATGAATACGTTATTACTCCTCGCGGCACGTTCCAgcc                                                                             >  2:717896/1‑141 (MQ=255)
                                                                    tCAGGTTGGCTTTGGTAACAACGCGACCGCTCATCAGTACTCATGAATGAATAGAAGGACAGAAAAAGGGG‑CTGCACCCGGTGCTTTTTCGGGAGAAGAATATGAATACGTTATTACTCCTTGCGGCACTTTCCAGTCAGATa                                                                        >  1:297401/1‑143 (MQ=255)
                                                                    tCAGGTTGGCTTTGGTAACAACGCGACCGCTCATCAGTACTAATACATCATTTGTATTACAGAAACAGGGC‑GCAAGCCCTGTTTTTTTTCGGGAGAAGAATATGAATACGTTATTACTCCTTGCGGCACTTTCCAGTCAGATa                                                                        >  2:926022/1‑143 (MQ=255)
                                                                      aGGTTGGCTTTGGTAACAACGCGACCGCTCATCAGTACTAATACATCATTTGTATTACAGAAACAGGGC‑GCAAGCCCTGTTTTTTTTCGGGAGAAGAATATGAATACGTTATTACTCCTTGCGGCACTTTCCAGTCAGATAAc                                                                      <  2:119483/143‑1 (MQ=255)
                                                                       ggTTGGCTTTGGTAACAACGCGACCGCTCATCAGTACTAATACATCATTTGTATTACAGAAACAGGGC‑GCAAGCCCTGTTTTTTTTCGGGAGAAGAATATGAATACGTTATTGCTCCCTGCGGCACTTTCCAGTCacctcacc                                                                     >  1:687800/1‑136 (MQ=255)
                                                                        gTTGGCTTTGGTAACAACGCGACCGCTCATCAGTACTAATAGAACAGTTGTATTACAGAAACAGGGC‑GCAAGCCCTGTTTTTTTTCTGGAGAAGAATATGAATACGTTATTACTCCTTGCGAACATATCCAGACAAATAACCt                                                                    >  2:705735/1‑143 (MQ=255)
                                                                          tGGCTTTGGTAACAACGCGACCGCTCATCAGTACTAATACATCATTTGTATTACAGAAACAGGGC‑GCAAGCCCTGTTTTTTTTCGGGAACAGAATATGAATTCGTTATTACTCCTTGCGGCACTTTCCAGTCAGATAACCttt                                                                  <  1:1229302/143‑1 (MQ=255)
                                                                           ggCTTTGGTATAAACTCGACCGCTCATCAGTATTACTCGATCATTTGTATGACAGAAACTGGGC‑GCAAGCCCTGTTTTTTTTCGGGAGTAGAATATGAATACGTTATTACTCCTTGCGGCACTTTCCAGTCAGATAACCTGTa                                                                 <  2:351559/143‑1 (MQ=255)
                                                                           ggCTTTGGTAACAACGCGACCGCTCATCAGTACTAATACATCATTTGTATTACAGAAACAGGGC‑GCAAGCCCTGTTTTTTTTCGGGAGAAGAATATGAATACGTTATTACTCCTTGCGGCACTTTCCAGTCAGATAACCTTTa                                                                 <  2:16850/143‑1 (MQ=255)
                                                                           ggCTTTGGTAACAACGCGACCGCTCATCAGTACTAATACATCATTTGTATTACAGAAACAGGGC‑GCAAGCCCTGTTTTTTTTCGGGAGAAGAATATGAATACGTTATTACTCCTTGCGGCACTTTCCAGTCAGATAACCTTTa                                                                 <  1:1050670/143‑1 (MQ=255)
                                                                            gCTTTGGTGACAACGCGACCGCCGAGCGGTACTAATACATCATTTGTATTACAGAAACAGGGC‑GCAAGCCCTGTTTTTTTTCGGGAGAAGAATATGAATACGTTATTACTCCTTGCGGCACTTTCCAGTCAGATAACCTTTaa                                                                <  1:283446/143‑1 (MQ=255)
                                                                              tttGGTAACAACGCGACCGCTCATCAGTACTAATACATCATTTGTATTACAGAAGCAGGGC‑GCAAGCCCTGTTTTTTTTCGGGAGAAGAATATGAATACGTTATTACTCCTTGCGGCACTTTCCAGTCAGATAACCTTTAATa                                                              >  1:668941/1‑143 (MQ=255)
                                                                              tttGGTAACAACGCGACCGCTCATCAGTACTAATACATCATTTGTATTACAGAAACAGGGC‑GCAAGCCCTGTTTTTTTTCGGGAGAAGAATAAGAATACGTTATTACTCCTTGCGGCACTTTCCAGTCAGATAACCTTTAAtc                                                              >  1:222044/1‑142 (MQ=255)
                                                                                tGGTAACAACGCGACCGCTCATCAGTACTAATACATCATTTGTATTACAGAAACAGGGC‑GCAAGCCCTGTTTTTTTTTTTTTTTTTATTATGAATACGTTGTTACTCCTTGCGGCACTTTCCAGTCAGATAACGTTTAATGCg                                                            >  2:346609/1‑143 (MQ=255)
                                                                                  gTAACAACGCGACCGCTCATCAGTACTAATACATCATTTGTATTACAGAAACAGGGC‑GCAAGCCCTGTTTATTTTCGGGAGAAGAATATGAATACGTTATTACTCCTTGCGGCACTATCCAGTCAGATACCCTTTAATACGAc                                                          >  2:666428/1‑143 (MQ=255)
                                                                                       aacGCGACCGCTCATCAGTACTAATACATCATTTGTATTACAGAAACAGGGC‑GCAAGCCCTGTTTTTTTTCGGGAGAAGAATATGAATACGtta                                                                                                      <  2:134907/94‑1 (MQ=255)
                                                                                       aacGCGACCGCTCATCAGTACTAATACATCATTTGTATTACAGAAACAGGGC‑GCAAGCCCTGTTTTTTTTCGGGAGAAAAATATGAATACGTTATTACTCCTTGCGGCACTTTCCAGTCAGATAACCTTTAATACGACCCAGc                                                     >  2:696081/1‑143 (MQ=255)
                                                                                          gcgACCGCTCCTCAGTACAAATACATCATTTGTATTACAGAAACAGGGC‑GCAAGCCCTGTTTTTTTTCGGGAGAAGAATATGAATACGTTATTACTCCTTGCGGCACTTTCCAGTCAGATAACCTTTAATACGACCCAGCAAg                                                  <  1:1177886/143‑1 (MQ=255)
                                                                                             acggCTCATCGGTACTAATACATCATTTGTATTACAGAAACAGGGC‑GCAAGCCCTGTTTTTTTTCGGGAGAAGAATATGAATACGTTATTACTCCTTGCGGCACTTTCCAGTCAGATAACCTTTAATACGACCCAGCAAgggg                                               <  1:509871/140‑1 (MQ=255)
                                                                                             aCCGCTCATCAGTACTAATACATCATTTGTATTACAGAAACAGGGC‑GCAAGCCCTGTTTTTTTTCGGGAGAAGAATATGAATACGTTATTACTCCTTGCGGCACTTTCCAGTCAGATAACCTTTAATACGACCCAGCAAgggg                                               >  1:758127/1‑143 (MQ=255)
                                                                                             aCCGCTCATCAGTACTAATACATCATTTGTATTACAGAAACAGGGC‑GCAAGCCCTGTTTTTTTTCGGGAGAAGAATATGAATACGTTATTACTCCTTGCGGAAATTAACAGCCAGATAACCTTTAATACGACCCAGCAAgggg                                               >  1:1218566/1‑143 (MQ=255)
                                                                                             aCCACTCAGCAGTACTAATACTTTATTTGTATTGCTGATGCGCGCC‑TCAATCCCTGTTTTTTTTCGGGAAAAGAATATGAATACGTTATTACTCCTTGCGGCACTTTCCAGTCAGATAACCTTTAATACGACCCAGCAAggtg                                               <  2:443010/143‑3 (MQ=255)
                                                                                              ccGCTCATCAGTACTAATACATCATTTGTATTACAGAAACAGGGC‑GCAAGCCCTGTTTTTTTTCGGGAGAAGAATATGAATACGTTATTACTCCTTGCGGCACTTTCCAGTCAGATAACCTTTAATACGACCCAGCAAgggca                                              >  2:195448/1‑141 (MQ=255)
                                                                                               cGCTGATCAGTACGAATACATGATTTGTATGACAGAAGCGGGGC‑GCAAGCCCTGTTTTTTTGCGGGAGAAGAATATGAATACGTTATTACTCCTTGCGGCACTTTCCAGTCAGATAACCTTTAATACGACCCAGCAAGGGGAt                                             <  2:348029/143‑1 (MQ=255)
                                                                                                gCTCATCAGTACTAATACATCATTTGTATTACAGAAACAGGGC‑GCAAGCCCTGTTTTTTTTCGGGAGAAGAATATGAATACGTTATTACTCCTTGCGGCACTTTCCAGTCAGATAACCTTTAATACGACCCAGCAAGGGGaag                                            >  1:1015108/1‑141 (MQ=255)
                                                                                                 cTCATCAGTACTAATACATCATTTGTATTACAGAAACAGGGC‑GCAAGCCCTGTTTTTTTTCGGGAGAAGAATATGAATACGTTATTACTCCTTGCGGCACTTTCCAGTCAGATAACCTTTAATACGACCCAGCAAGGGGAtgt                                           <  2:529418/143‑1 (MQ=255)
                                                                                                  tcatcaGTACTAATACATCATTTGTATTACAGAAACAGGGC‑GCAAGCCCTGTTTTTTTTCGGGAGAAGAATATGAATACGTTATTACTCCTTGCGGCACTTTCCAGTCAGATAACCTTTAATCCGACCCAGTAAGGGGAtgtg                                          >  2:1203876/1‑143 (MQ=255)
                                                                                                  tcatcaGTACTAATACATCATTTGTATTACAGAAACAGGGC‑GCAAGCCCTGTTTTTTTTCGGGAGAAGAATATGAATACGTTATTACTCCTTGCGGCACTTTCCAGTCAGATAACCTTTAATACGACCCAGCAAGGGGAtgtg                                          >  1:819396/1‑143 (MQ=255)
                                                                                                  tcatcaGTACTAATACATCATTTGTAGTACAGAAACAGGGC‑GCAAGCCCTGTTTTTTTTCGGGAGAAGAATATGAATACGTTATTACTCCTTGCGGCACTTTCCAGTCAGATAACCTTTAATACGACCCAGCAAGGGGAtgtg                                          <  2:873077/143‑1 (MQ=255)
                                                                                                    atcaGTACTAATACATCATTTGTATTACAGAAACAGGGC‑GCAAGCCCTGTTTTTTTTCGGGAGAAGAATATGAATACGTTATTACTCCTTGCGGCACTTTCCAGTCAGATAACCTTTAATACGACCCAGCCCGGGTATGTGta                                        >  1:823988/1‑143 (MQ=255)
                                                                                                    atcaGTACTAATACATCATTTGTATTACAGAAACAGGGC‑GCAAGCCCTGTTTTTTTTCGGGAGAAGAATATGAATACGTTATTACTCCTTGCGGCACTTTCCAGTCAGATAACCTTTAATACGACCCAGCAAGGGGATGTGta                                        >  2:729915/1‑143 (MQ=255)
                                                                                                    atcaGTACTAATACATCATTTGTATTACAGAAACAGGGC‑GCAAGACCTGTTTTTTTTCGTGAGAAGAATATGAATACGTTAGTACTCCTTGTGGCACTAGTCAATCACTGAACCTTTAATACGACCCAGCAACGGGAtgtgca                                        >  2:1251060/1‑141 (MQ=255)
                                                                                                      taGTAATAATACATCATTTGTATTACAGAAACAGGGC‑GCAAGCCACCTAATAATGCGTGAGAAGAATATGAATACGTTATTACTCCTTGCGGCACTTTCCAGTCAGATAACCTTTAATACGACCCAGCAAGGGGATGTGtata                                      <  1:1281744/142‑1 (MQ=255)
                                                                                                      caGTACTAATACATCATTTGTATTACAGAAACCGGGC‑GCGCGCCCTCTAATTCTGTGGGATAAGAATATGAATACGTTATTACTCCTTGCGGCACTTTCCAGTCAGATAACCTTTAATACGACCCAGCAAGGGGATGTGtata                                      <  1:1281765/143‑1 (MQ=255)
                                                                                                                 catcatTTGTATTACAGAAACAGTGC‑GCAAGCCCTGTTTTTTTTCGGGAGAAGAATATGAATATGTTATTTCTTCTTGCGGCATTTTCCAGTCAGATAACCTTTAATACGACCCAGCAAGGGGATGTGTATACCATTATTCCt                           <  1:1130757/143‑1 (MQ=255)
                                                                                                                  atcatTTGTATTACAGAAACAGGGC‑GCACGCCCTGTTTTTTTTCGGGAGCAGAATATGAATACGTTATTACTCCTTGCGGCACTTTCCAGTCAGATAACCTTTAATACGACCCAGCAAGGCGATGTGTATACCATTATTCCTg                          >  1:519033/1‑143 (MQ=255)
                                                                                                                  atcatTTGTATTACAGAAACAGGGC‑GCAAGCCCTGTTTTTTTTCGGGAGAAGAATATGAATACGTTATTACTCCTTGCGGCACTTTCCAGTCAGATAAACTTTAATACGACCCGGCAAGGGGATGTGTATAGCattgtagctg                          >  1:210073/1‑136 (MQ=255)
                                                                                                                   tcatTTGTATTACAGAAACAGGGC‑GCAAGCCCTGTTTTTTTTCGGGAGAAGAATATGAATACGTTATTACTCCTTGCGGCACTTTCCAGTCAGATAACCTTTAATACGACCCAGCACGGGGATGTGTATACCATTATGCCTGa                         >  1:469158/1‑143 (MQ=255)
                                                                                                                    catTTGTATTACAGAAACAGGTC‑TCAAGCCCTGTTTTTTTTCGGGAGAAGAATATGAATACGTTATTACTCCTTGCGGCACTTTCCAGTCAGATAACCTTTAATACGACCCAGCTAGGGGATGTGTATACCATTATTCCTGaa                        <  2:268840/143‑1 (MQ=255)
                                                                                                                       ttGTATTACAGAAACAGGGC‑GCAAGCCCTGTTTTTTTTCGGGAGAAGAATATGAATACGTTATTACTCCTTGCGGCACTTTCCAGTCAGATAACCTTTAATACGACCCAGCAAGGGGGTGTGTATACCATTATTCCTGAAGTc                     >  2:430619/1‑143 (MQ=255)
                                                                                                                         gTATTACAGAAACAGGGC‑GCAAGCGCTGTTTTTTTGCGGGAGAAGAATATGAATACGTTATTACTCCTTGCGGCACTTTCCAGTCAGATAACCTTTAATACGACCCAGCAAGGGGATGTGTATACCATTATTCCTGAAGTCAc                   <  1:90150/143‑1 (MQ=255)
                                                                                                                           aTTACAGAAACAGGGC‑GCAAGCCCTGTTTTTTTTCGGGAGAAGAATATGAATACGTTATTACTCCTTGCGGCACTTTCCAGTCAGATAACCTTTAATACGACCCAGCAAGGGGATGTGTATACCATTATTCCTGAAGTCActc                 <  1:663408/143‑1 (MQ=255)
                                                                                                                              aCAGAAACGGGGC‑GCAAGCCCGGTTTTTTTTCGGGAGAAGAGTATGAATACGTTATTACTCCTTGCGGCACTTTCCAGTCAGATAACCTTTAATACGACCCAGCAAGGGGATGTGTATACCATTATTCCTGAAGTCACTCTTa              <  1:558133/143‑1 (MQ=255)
                                                                                                                                gagcagaGGGCGGCAGGCCCTGTGGTGTTTCGGGAGAAGAGGATGAATACGTTATTACTCCTTGCGGCACTTTCCAGTCAGATAACCTTTAATACGACCCAGCAAGGGGATGTGTATACCATTATTCCTGAAGTCACTCTTAc             <  2:136748/137‑1 (MQ=255)
                                                                                                                                  aaaCAGGGC‑GCAAGCCCTGTTTTTTTTCGGGAGTAGAATATGCATACTGTAGTACTTCTTGCGGCACTTTCCAGTCAGATAACCTTTTATTCGGCCCAGCAAGGGGATGTGTATACCATTATTCCTGAAGTCACTCTTACTCa          <  2:842589/143‑1 (MQ=255)
                                                                                                                                  aaaCAGGGC‑GCAAGCCCTGTTTTTTTTCGGGAGCAGAATATGAATACGTTATTACTCCTTGCGGCACTTTCCAGTCAGATAACCTTTAATACGACCCAGCAAGGGGATGTGTATACCATTATTCCTGAAATCACTCTTACTCa          >  2:544726/1‑143 (MQ=255)
                                                                                                                                      aGGGC‑GCAAGCCCTGTTTTTTTTCGGGAGAAGAATATGAATACGTTATTACTCCTTGCGGCACTTTCCAGTCAGATAACCTTTAATACGACCCAGCAAGGGGATGTGGATACCATTATTCCTGAAGTCACTCTTGCTCAGTCt      >  1:4719/1‑143 (MQ=255)
                                                                                                                                       gggC‑GCAAGCCCTGTTTTTTTTCGGGAGAAGAATATGAATACGTTATTACTCCTTGCGGCACTTTCCAGTCAGATAACCTTTAATACGACCCAGCAAGGGGATGTGTATACCCTTCTTCCTGAAGTCACTCTTACTCAATCtt     >  1:376666/1‑143 (MQ=255)
                                                                                                                                       gggC‑GCAAGCCCTGTTTTTTTTCGAGAGAAGAATATGAATACGTTATTACTCCTTGCGGCACTTTCCAGTCAGATAACCTTTAATACGACCCAGCAAGGGGATGTGTATACCATTATTCCTGAAGTCACTCTTACTCAATCtt     <  2:1041017/143‑1 (MQ=255)
                                                                                                                                        ggC‑GCAAGCCCTGTTTTTTTTCGGGAGAAGAATATGAATACGTTATTACTCTTTGCGGCTCTTTCCAGTCATATAACCTTTAATACTACCCAGCTAGGTGATGTGTATCACATTATTCCTGAATTCACCTTTACTCACTCTTg    >  2:573355/1‑143 (MQ=255)
                                                                                                                                          c‑gcAAGCCCTGTTTTTTTTCGGGAGAAGAATATGAATACGTTATTACTCCTTGCGGCACTTTCCAGTCAGATAACCTTTAATACGACCCAGCAAGGGGATGCGTATACGATGATTCCTGAAGTCACTCTTACTCAATCTTGTc  <  1:664852/143‑1 (MQ=255)
                                                                                                                                               |                                                                                                                                          
AAACAGTTCGGTGGTGGCAACGGTGCTGCAGTTGACCAGACTGCATCTAACTCCTCCGTCAACGTGACTCAGGTTGGCTTTGGTAACAACGCGACCGCTCATCAGTACTAATACATCATTTGTATTACAGAAACAGGGC‑GCAAGCCCTGTTTTTTTTCGGGAGAAGAATATGAATACGTTATTACTCCTTGCGGCACTTTCCAGTCAGATAACCTTTAATACGACCCAGCAAGGGGATGTGTATACCATTATTCCTGAAGTCACTCTTACTCAATCTTGTC  >  NC_000913/1104792‑1105072

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.