| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| JC | NC_000913 | 4,001,645 | Δ5 bp | coding (220‑224/951 nt) | corA → | magnesium/nickel/cobalt transporter |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 4001644 | 1 (0.010) | 61 (0.860) | 50/282 | 0.4 | 98.4% | coding (219/951 nt) | corA | magnesium/nickel/cobalt transporter |
| ? | NC_000913 | 4001650 = | 1 (0.010) | coding (225/951 nt) | corA | magnesium/nickel/cobalt transporter | |||||
GATTGATCTTGTCGAACCGGACGACGACGAGCGACTGCGCGTACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATATTCACTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGGTCGTCTGTTTACTCTGCGTGAGCGTGAACTGCCCGCTTTTCGTCTGTATCGTATGCGTGCCCGTAGCCA > NC_000913/4001509‑4001790 | gtatggattgagcttgtcgaaccggacgacgacgagcgactgcgcgtacaatctgaacttggccagagcctggcaacccgcccggaactggaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatct < 1:438466‑M2/2‑1 (MQ=255) gattgatcttgtcgaaccggacgacgacgagcgactgcgcgtacaatttgaacttggccagagcctggcaacccgcccggaactggaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCcttc < 1:325999‑M2/7‑1 (MQ=255) gattgatcttgtcgaaccggacgacgacgagcgactgcgcgtacaatctgaacttggccagagcctggcaacccgcccggaactggaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcctCTCcttc > 1:849500‑M2/137‑143 (MQ=255) attgatcttgtcgaaccggacgacgacgagcgactgcgcgtacaatctgaacttggccagagcctggcaacccgcccggaactggaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCcttct > 2:971102‑M2/136‑143 (MQ=255) ttgatcttgtcgaaccggacgacgacgagcgactgcgcgtacaatctgaacttggccagagcctggcaacccgcccggaactggaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCcttctt < 1:797713‑M2/9‑1 (MQ=255) tgatcttgtcgaaccggacgacgacgagcgactgcgcgtacaatctgaacttggccagagcctggcaacccgcccggaactggaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCcttcttc > 1:399203‑M2/134‑143 (MQ=255) tgatctggtcgcaccggacgacgacgagcgactgcgcgcacaaccagtaattgggcagagcgtggcaccgcgcccggaactggaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCcttcttc < 1:240029‑M2/10‑1 (MQ=255) accggacgacgacgagcgactgcgcgtacaatctgaacttggccagagcctggcaacccgcccggaactggaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGAt < 2:143817‑M2/22‑1 (MQ=255) ccggacgacgacgagcgactgcgcgtacaatctgaacttggccagagcctggcaacccgcccggaactggaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATg < 2:469668‑M2/23‑1 (MQ=255) gacgacgacgagcgactgcgcgtacaatctgaacttggtcagagcctggcaacccgcccggaactggaagacatcgaagcatcggcacgtttctttgaagacgacgccggcctgcatCTCCTTCTTCTTCTTTGAAGATGCgg > 1:950412‑M2/118‑143 (MQ=255) gacgacgacgagcgactgcgcgtacaatctgaacttggccagagcctggcaacccgcccggaactggaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCgg < 1:554904‑M2/26‑1 (MQ=255) cgacgacgagcgactgcgcgtacaatctgaacttggccagagcctggcaacccgcccggaactggaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGaa < 1:744557‑M2/28‑1 (MQ=255) cgacgacgagcgactgcgcgtacaatctgaactcggccacagcctggcaaccctcccggaactggaagacagcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGaa < 1:1200517‑M2/28‑1 (MQ=255) cgacgacgagccactcctcgtacaatctgaacatggacaaagcctggcaacccgcccggaactggaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGaa < 1:235866‑M2/28‑1 (MQ=255) acgacgagcgactgcgcgtacaatctgaccttggccagagcctggcaacccgcccggaactggaagacatcgaagcatcggcacgtttctttcaagacgactacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGa < 1:543614‑M2/30‑1 (MQ=255) actagggactgcgcgtacaatctgaacttggcccgaggctggcaacccgcccggaactggaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCa < 2:193599‑M2/33‑1 (MQ=255) acgagcgactgcgcgtacgatctgaacttggccagagcctgggaacccgcccggaactggaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCa < 2:193601‑M2/33‑1 (MQ=255) gcgactgcgcgtacaatctgaacttggccagagcctggcaacccgcccggaactggaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGcc > 1:1066981‑M2/107‑143 (MQ=255) cgactgcgcgtacaagcggaactgggccagagtctggcaaaccgccctgaactggaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCg < 2:615696‑M2/38‑1 (MQ=255) cgaacaatctgaactcggccagagcctggcaacccgcccggaactggaagacatcgaagcatcggcacgtttcgttgatacacatgtcggcctgcatCTCCTTCTTCTGCTTTGAAGATGCGGAAGATCACGCCTGTAACTcc < 1:1224997‑M2/46‑1 (MQ=255) gtacaatctgaacttggccagagcctggcaacccgcccggaactggaagacatcgaagcatcggcacgtttctttgtggtggtggacgaccaacatATCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTACa > 1:941641‑M2/97‑143 (MQ=255) aatctgaacttgtccacagcctggcaacccccccggaactggaagacatcgacgcatcggcacgtttctttgaagacgacgacgtcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACtgt < 1:330167‑M2/51‑1 (MQ=255) atctgaacttgcccagagcctggcaacccgcccggaactggaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACtgtg < 2:703349‑M2/52‑1 (MQ=255) ggcgctggccagagcctggcacgccgcccggaactggaagccatcgtcgcatcgtcacgtttctttgaagacgacgacggccttcacCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCAt < 2:220937‑M2/56‑1 (MQ=255) aacttggccagagcctggcaacccgcccggaactggaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCAtt < 1:887380‑M2/57‑1 (MQ=255) ggccagcgcctggctacccgctcgtatctggtagacatcgaatcatcggctcgtttctttgaagacgacgacggccttcatCTCCTTCTTCTTCTTTGATGATGCGGAAGACCACGCCGGTAACTCCACTGTGGCATTTACCa < 2:888369‑M2/62‑1 (MQ=255) gccaaagcctggcaacccgcccggaactggaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCAt < 1:1119808‑M2/63‑1 (MQ=255) cagagcctggcaacccgcccggaactggaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGCGGCATTTACAATcc > 2:349625‑M2/79‑143 (MQ=255) gagcgtggccacccgcccggaactggaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGt < 2:243464‑M2/67‑1 (MQ=255) gcctggcaacccgcccggaactggaagacatcgtggctccgacacccgtctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGa < 2:909508‑M2/69‑1 (MQ=255) tctggcaacccgcccggaactggaagacagcgaagcatcggcatgtgtctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGTATTTACCATCCTTGAt < 2:163415‑M2/70‑1 (MQ=255) cgggcaacccccccggaactggaagacatcgaagcagcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATg < 1:1122840‑M2/71‑1 (MQ=255) tccgcccagaacgggaagacatggacgcatcgacacgtttctgtgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGGTCGTCt < 1:436931‑M2/78‑1 (MQ=255) ccgGAAGTGGAATACATCGAAGCATCGGCGCGTTGCTGTGAAGACGACGACGGCCTGCAT‑TT‑A‑‑‑CTTCAACTGGTTGTAAGATGCCGAAGATCACGCCGTTAGCTCCACTGTGGGATTTTCCATCCGTGATGGTCGTCTGTTTa < 2:1049560/143‑1 (MQ=255) cccgcccggaactggaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTCTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGGTCGTCt < 1:375152‑M2/78‑1 (MQ=255) cccgcccggaacggagagacatggaagcatgggcacgttgcttggaagacgacgacggcctgcatCTCCGTCTTCTCCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGGTCGTCt < 1:31277‑M2/78‑1 (MQ=255) ccgtaactggaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGGTCGTCTGTTTa < 1:708911‑M2/83‑1 (MQ=255) ccggaactggaagatatcgaagcagcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGGTCGTCTGTTTa < 1:867681‑M2/83‑1 (MQ=255) ccggaactggaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGGTCGTCTGTTTa < 2:399203‑M2/83‑1 (MQ=255) cggaactggaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCCTCCGTGATGGTCGTCGGTCTAc > 1:617899‑M2/60‑143 (MQ=255) ggaactggaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCCCTGTGGCATTTACCATCCCTGATGGTCGTATGTTTCct > 2:331818‑M2/59‑143 (MQ=255) ctggaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGGTCGTCTGTTTACTCTgc < 1:400158‑M2/89‑1 (MQ=255) ggaaggcatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTACGTCGCCGTTGAAGATGCGGGAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGGTCGTCTGTTTACTCTgcgt < 2:148653‑M2/91‑1 (MQ=255) aagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGTTGGTCGTCTGTTTGCTCTgcgtga > 1:995166‑M2/51‑143 (MQ=255) aagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGGTCGTCTGTTTACTCTgcgtga < 1:971102‑M2/93‑1 (MQ=255) cgaagcatgagcacgtttctttgaagacgacgactgcatgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTTCACTGTGGCATTTACCATCCGTGATGGTCGTCTGTTTACTCTGCGTGAGCGTGaa < 2:137530‑M2/100‑1 (MQ=255) cgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACtgtg < 1:1024027‑M2/52‑1 (MQ=255) cgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACtgtg > 2:1024027‑M2/44‑95 (MQ=255) cgaagcagcggcatgtttatttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGGTCGTCTGTTTACTCTGCGTGAGCGTGaa < 1:998950‑M2/100‑1 (MQ=255) gcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGGTCGTCTGTTTACTCTGCGTGAGCGTGAACTGc < 1:82477‑M2/104‑1 (MQ=255) gcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGGTCGTCTGTTTACTCTGCGTGAGCGTGAACTGc < 1:1290198‑M2/104‑1 (MQ=255) catcggcgcgggtctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGGTCGTCTGTTTACTCTGCGTGAGCGTGAACTGcc < 1:230‑M2/105‑1 (MQ=255) gcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCAGTGATGGTCGTCTGTTTACTCTGCGTGAGCGTGAACTGCCCTCtt > 1:867756‑M2/34‑143 (MQ=255) cgtttctttgaagacgaccacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGGTCGTCTGTTTACTCTGCGTGAGCGTGAACTGCCCGCTTTTc < 2:941641‑M2/113‑1 (MQ=255) tttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGGTCGTCTGTTTACTCTGCGTGAGCGTGAACTGCCCGCTTTTCGt > 2:1039792‑M2/29‑143 (MQ=255) tcttggaagacgacgacggcccgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCAGTTACCATCCGTGATGGTCGTCTGTTTACTCTGCGTGAGCGTGAACTGCCCGCTTTTCGTCt < 2:533432‑M2/117‑1 (MQ=255) ttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGGTCGTCTGCCAACGCTGCGTGAGCGTGAACTGCCCGCTTTTCGTCTGTa > 1:106733‑M2/24‑143 (MQ=255) gaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGCTGGTCGTCTGTTTACTCTGCGCGAGCGTGAACTGCCCGCTTTTCGTCTGCATc > 1:500606‑M2/22‑143 (MQ=255) ggacgacgtcggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGGTCGTCTGTTTACTCTGCGTGAGCGTGAACTGCCCGCTTTTCGTCTGTATCGt < 2:1088681‑M2/124‑1 (MQ=255) tctatgacggcctgcatCTCCTTCTTCTTCTTTTAAGATGCGGAAGATCACGCGGGTAACTCCACTGTGGCATTGACCATCCGTGATGGTCGTCTGTTTACTCTGCGTGAGCGTGAACTGCCCGCTTTTCGTCTGTATCGTAt < 1:1116486‑M2/126‑1 (MQ=255) tgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGGTCGTCTGTTTACTCTGCGTGAGCGTGAACTGCCCGCTTTTCGTCTGTATCGTCTGCGTGCCcgtgg > 1:129083‑M2/6‑141 (MQ=255) atCGCCTTCTTCTTCTTGGGCGACGCGGAAGTTGAGGCCGGTAGCTCCGCTGTGGCATTTACCATCCGTGATGGTCGTCGGTTCACTCTGCGTGAGCGTGAACTGCCCGCTTTTCGTCCGTATCGTATGCGTGCCCGTAGCCa < 2:5697‑M2/141‑1 (MQ=255) | GATTGATCTTGTCGAACCGGACGACGACGAGCGACTGCGCGTACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATATTCACTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGGTCGTCTGTTTACTCTGCGTGAGCGTGAACTGCCCGCTTTTCGTCTGTATCGTATGCGTGCCCGTAGCCA > NC_000913/4001509‑4001790 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |