New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	= 2224021	64 (0.990)	3 (0.050)	3/282	10.1	4.9%	coding (850/933 nt)	pbpG	D‑alanyl‑D‑alanine endopeptidase
	?	NC_000913	2742804 =	54 (0.840)					coding (422/1227 nt)	yfiN	putative membrane‑anchored diguanylate cyclase
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

AACTGGCAGGAAGTGGAGTAAAAATTACGGATGGCAGAGTATCGCCATCCGAATTCACTTAATCGTTCTGTGCCGTCTGCCCCGCCGCCGCCATTTGGGCGGCTTTTTGTTTTTTATAGCTCAACGCTGCTGCCGGCACAGGCATCACTTTACCGGTTTCAATCCAGGTACGCAGGCGGCTGGCATCGGCAAAATGGGTATATTTGCCAAACGCGTCCATCACTACCAGCGCCACCGGTTTATTATTGATAACCGTACGCATCACCAGACAATGGCCCGCC  >  NC_000913/2223880‑2224160                                                                                                                                              |                                                                                                                                            aaCTGGCAGGAAGTGGAGTAAAAATTACGGATGGCAGAGTATCGCCATCCGAATTCACTTAATCGTTCTGTGCCGTCTGCCCCGCCGCCGCCATTTGGGCGGCTTTTTGTTTTTTATAGCTCAACGCTGCTGCCGGCACAGGc                                                                                                                                            <  2:362970/143‑1 (MQ=255)         ggAAGTGGAGTAAAAATTACGGATGGCAGAGTATCGCCATCCGAATTCACTTAATCGTTCTGTGCCGTCTGCCCCGCCGCCGCCATTTGGGCGGCTTTTTGTTTTTTATAGCTCAACGCTGCTGCCGGCACAGGCATCACctt                                                                                                                                    >  2:1114852/1‑143 (MQ=255)            aggggAGTAAAAAGAACGGGGGGCAGAGTATCGCCATCCGAATGCACTTAAGCGTTCTGTGCCGTCTGCCCCGCCGCCGCCATTTGGGCGGCTTTTTGTTTTTTATAGCTCAACGCTGCTGCCGGCACAGGCATCACTTTAcc                                                                                                                                 <  1:240875/140‑1 (MQ=255)                 ggTAAAAATTACGGATGGCAGAGGATCGCCATCCGAATTCACTTAATCGTTCTGTGCCGTCTGCCCCGCCGCCGCCATTTGGGCGGCTTTTTGTTTTTTATAGCTCAACGCTGCTGCCGGCACAGGCATCACTTTACCGGttt                                                                                                                            <  2:635993/142‑1 (MQ=255)                    aaaatTTACCGATGGCAGAGTCTCGCCATCCGAATTCACTTAATCGTTCTGTGCCTTCTGCCCCGCCGCCGCCATTTGGGCGGCTTTTTGTTTTTTATAGCTCTACTCTGCTGCCGGCACAGGCATCACTTTACCGGTTTCaa                                                                                                                         <  2:498241/143‑1 (MQ=255)                    aaaaaTTACGGATGGCAGAGTATCGCCATCCGAATTCACTTAATCGTTCTGTGCCGTCTGCCCCGCCGCCGCCATTTGGGCGGCTTTTTGTTTTTTATAGCTCAACGCTGCTGCCGGCACAGGCCTCACTTTACCGGTTTcca                                                                                                                         >  1:515331/1‑141 (MQ=255)                     aaaaTTACGGATGGCAGAGTATCGCCATCCGAATTCACTTAATCGTTCTGTGCCGTCTGCCCCGCCGCCGCCATTTGGGCGGCTTTTTGTTTTTTATAGCTCAACGCTGCTGCCGGCCCAGGCCTCACTTTACGCGTTTCaag                                                                                                                        >  1:242989/1‑142 (MQ=255)                       aaTTACGGATGGCAGAGTATCGCCATCCGAATTCACTTAATCGTTCTGTGCCGTCTGCCCCGCCGCCGCCATTTGGGCGGCTTTTTGTTTTTTATAGCTCAACGCTGCTGCCGGCACAGGCATCACTTTACCGGTTTCAATcc                                                                                                                      <  1:685402/143‑1 (MQ=255)                        aTTCCGGATGGCAGAGTATCGCCATCCGAATTCACTTAATCGTTCTGTGCCGTCTGCCCCGCCGCCGCCATTTGGGCGGCTTTTTGTTTTTTATAGCTCAACGCTGCTGCCGGCACAGGCATCACTTTACCGGTTTCAATCCa                                                                                                                     <  1:1140427/143‑1 (MQ=255)                         ttACGAATGGCAGAGTATCGCCATCCGAATTCACTTAATCGTTCTGTGCCGTCTGCCCCGCCGCCGCCATTTGGGCGGCTTTTTGTTTTTTATAGCTCAACGCTGCTGCCGGCACAGGCATCACTTTACCGGTTTCAATCCAg                                                                                                                    <  1:400996/143‑1 (MQ=255)                         tgtcGGATGGCAGGGGAGCGCCAGCCGGATTCACTTGGTCGTTCTGTGGCGTCTGGGCCGCCGCCGCCATGTGGGCGGCTTTTTGTTTTTTATAGCGCAACGCGGCTGCCGGCACAGGCATCACTTTACCGGTTTCAATCCAg                                                                                                                    <  2:1087817/140‑1 (MQ=255)                              gATGGCAGAGTATCGCCATCCGAATTCACTTAATCGTTCTGTGCCGTCTGCCCCGCCGCCGCCATTTGGGCGGCTTTTTGTTTTTTATAGCTCAACGCTGCTGCCGGCACAGGCATCACTTTACCGGTTTCAATCCAGGTACg                                                                                                               >  2:74804/1‑143 (MQ=255)                                tGGCAGAGGATCGCCAGCCGAAGTCACTTAATCGTTCTGTGCCGTCTGCCCCGCCGCCGCCATTTGGGCGGCTTTTTGTTTTTTATAGCTCAACGCTGCTGCCGGCACAGGCATCACTTTACCGGTTTCAATCCAGGTACGCa                                                                                                             <  1:387021/143‑1 (MQ=255)                                  gCAGAGTATCGCCATCCGAATTCACTTAATCGTTCTGTGCCGTCTGCCCCGCCGCCGCCATTTGGGCGGCTTTTTGTTTTTTATAGCTCAACGCTGCTGCCGGCACCGGCATCACTTTACCGGTTTCAATCCAGGTACGCAgg                                                                                                           >  1:417566/1‑143 (MQ=255)                                  gCAGAGTATCGCCATCCGAATTCACTTAATCGTTCTGTGCCGTCTGCCCCGCCGCCGCCATTTGGGCGGCTTTTTGTTTTTTATAGCTCAACGCTGCTGCCGGCACAGGCATCACTTTACCGGCTTCAATCCAGGTACGCCgg                                                                                                           >  2:38982/1‑143 (MQ=255)                                             cctcccGAATTCACTTGATCGTTCTGTGCCGTCTGCCCCGCCGCCGCCATTTGGGCGGCTTTTTGTTTTTTGCAGCTCAACGCTGCTGCCGGCACAGGCATCACTTTCCCGGTTTCAAGCCAGGTACGCAGGCGGCTGGCATc                                                                                                <  1:638889/139‑1 (MQ=255)                                             ccATCCGAATTCACTTAGTGGTCTTTGGCCGTCTGCCCCGCCGCCGCCATTTGGGCGGCTTTTTGTTTTTTATAGCTCAACGCTGCTGCCGGCACAGGCATCACTTTACCGGTTTCAATCCAGGTACGCAGGCGGCTGGCATc                                                                                                <  2:452741/143‑1 (MQ=255)                                             ccATCCGAATTCACTGAATCGATCGGGGCCGTCTGCCCCGCCGCCGCCATTTGGGCGGCTTTTTGTTTTTTATAGCTCAACGCTGCTGCCGGCACAGGCATCACTTTACCGGTTTCAATCCAGGTACGCAGGCGGCTGGCATc                                                                                                <  1:706962/143‑1 (MQ=255)                                              cATCCGAATTCACTGAATCGTTCTGTGCCGTCTGCCCCGCCGCCGCCATTTGGGCGGCTTTTTGTTTTTTATAGCTCAACGCTTCTGTCGGCACAGGCATCACTTTACCGGTTTCAATCCAGGTACGCAGGCGGCTGGCATCg                                                                                               <  1:165771/143‑1 (MQ=255)                                                tCCGAATTCACTTGATCGTTCTGTGCCGTCTGCCCCGCCGCCGCCATTTGGGCGGCTTTTGGTTTTTTATAGCTCAACGCTGCTGCCGGCACAGGCATCACTTTACCGGTTTCAATCCAGGTACGCAGGCGGCTGGCATCGGc                                                                                             <  1:777356/143‑1 (MQ=255)                                                tCCGAATTCACTTAATCGTTCTGTGCCGTCTGCCCCGCCGCCGCCATTTGGGCGGCTTTTTGTTTTTTCTAGCTCAACGCTGCTGCCGGCACAGGCATCACTTTATCAGGTTAAAACAAGGTACACAGAGTGCTGGCATCGGc                                                                                             >  1:56618/1‑143 (MQ=255)                                                 ccGAATTCACTTAATCGTTCTGTGCCGTCTGCCCCGCCGCCGCCATATGGGCGGCTTTTTGTTTTTTATAGCTCAACGCTGCTGCCGGCACAGGCATCACGTTACCGGGTTCAATCCAGGTACGCAGGCGGCTGGCATCGGCa                                                                                            >  1:177231/1‑143 (MQ=255)                                                         aCTTAATCGTTCTGTGCCGTCTGCCCCGCCGCCGCCATTTGGGCGGCTTTTTGTTTTTTATAGCTCAACGCTGCTGCCGGCACAGGCATCACTTTACCGGTTTCAATCCAGGTACGCAGGCGGTTGGCATCGGCAAAAGGGGt                                                                                    >  1:889827/1‑143 (MQ=255)                                                         aCTTAATCGTTCTGTGCCGTCTGCCCCGCCGCCGCCATTTGGGCGGCTTTTTGTTTTTTATAGCTCAACGCTGCTGCCGGCACAGGCATCACTTTACCGGTTTCAATCCAGGTACGCAGGCGGCTGGCATCGGCAAAATGGGt                                                                                    >  1:347852/1‑143 (MQ=255)                                                         aCTTAATCGTTCTGTGCCGTCTGCCCCGCCGCCGCCATTTGGGAGGCTTTTTGTTTTTTATAGCTCAACGCTGCTGCCGGCACAGGCATCACTTTACCGGTTTCAATCCAGGTACGCAGGCGGCTGGCATCGGCAAAATgggg                                                                                    >  1:912919/1‑142 (MQ=255)                                                           ttAATCGTTCTGTGCCGTCTGCCCCGCCGCCGCCATTTGGGCGGCTTTTTGTTTTTTATAGCTCAACGCTGCTGCCGGCACAGGCATCACTTTACCGGTTTCAATCCAGGTACGCAGGCGGCTGGCATCGGCAAAATGGGtat                                                                                  >  1:859709/1‑143 (MQ=255)                                                                 gTTCTGTGCCGTCTGCCCCGCCGCCGCCATTTGGGCGGCTTTTTGTTTTTTATAGCTCAACGCTGCTGCCGGCACAGGCATCACTTTACCGGTTTCAATCCAGGTACGCAGGCGGCTGGCATCGGCACAATGGGTATATTTGc                                                                            >  1:769905/1‑143 (MQ=255)                                                                     tgtgCCGTCTGCCCTGCCGCCGCCATTTGGGCGGCTTTTTGTTTTTTATAGCTCAACGCTGCTGCCGGCACAGGCATCACTTTACCGGTTTCAATCCAGGTACGCAGGCGGCTGGCATCGGCAAAATGGGTATATTTGCCaaa                                                                        <  1:917547/143‑1 (MQ=255)                                                                     tgtgCCGTCTGCCCCGCCGCCGCCATTTGGGCGGCTTTTTGTTTTTTATAGCTCAACGCTGCTGCCGGCACAGGCATCACTTTACCGGTTTCAATCCAGGTACGCAGGCGGCTGGCATCGGCAAAATGGGTATATTTGCCaaa                                                                        <  2:37180/143‑1 (MQ=255)                                                                       tgCCGTCTGCCCCGCCGCCGCCATTTGGGCGGCTTTTTGTTTTTTATAGCTCAACGCTGCTGACGGCACAGGCATCACTTTACCGGTTTCAATACAGGTACGCAGGCGGCTGGCCTCGGCAACAAGGGTATAGTTGCCaaagg                                                                      >  1:238661/1‑141 (MQ=255)                                                                        gCCGTCTGCCCCGCCGCCGCCATTTGGGCGGCTTTTTGTTTTTTATAGCTCAACGCTGCTGCCGGCACAGGCATCACTGTACCGGTTTCAATCCAGGTACGCAGGCGGCTGGCATCGGCAAAATGGGTATATTTGCCAAAcgc                                                                     <  1:406570/143‑1 (MQ=255)                                                                                ccccGCCGCCGCCATTTGGGCGGCTTTTTGTTTTTTATAGCTCAACGCTGCTGCCGGCACAGGCATCACTTTACCGGTTTCAATCCAGGTACGCAGGCGGCTGGCATCGGCAAAATGGGTATAttt                                                                              <  2:790239/126‑1 (MQ=255)                                                                                ccccGCCGCCGCCATTTGGGCGGCTTTTTGTTTTTTATAGCTCAACGCTGCTGCCGGCACAGGCATCACTTTACCGGTTTCAATCCAGGTACGCAGGCGGCTGGCATCGGCAAAATGGGTATAttt                                                                              >  1:790239/1‑126 (MQ=255)                                                                                ccccGCCGCCGCCATTTGGGCGGCTTTTTGTTTTTTATAGCTCAACGCTGCTGCCGGCACAGGCATCACTTTACCGGTTTCAATCCAGGTACGCAGGCGGCTGGCATCGGCAAAATGGGTATATTTGCCAACCGCGTCCATCa                                                             >  1:500560/1‑143 (MQ=255)                                                                                 cccGCCGCCGCCATTTGGGCGGCTTTTTGTTTTTTATAGCTCAACGCTGCTGCCGGCACAGGCATCACTTTACCGGTTTCAATCCAGGTACGCAGGCGGCTGGCATCGGCAAAATGGGTATATTTGCCAAACGCGTCCATCAc                                                            <  1:624025/143‑1 (MQ=255)                                                                                  ccgccgccgCCATTTGGGCGGCTTTTTGTTTTTTATAGCTCAACGCTGCTGCCGGCACAGGCATCACTTTACCGGTTTCAATCCAGGTACGCAGGCGGCTGGCATCGGCAAACTGGGTATATTTGCCAAACGCGTCCATCACt                                                           >  1:182095/1‑143 (MQ=255)                                                                                    gccgccgccATTTGGGTGGCTTTTTGTTTTTTATAGCGCAACGCTGCTGCCGGCACAGTCATCACGTTACCGGTTTCAATCCAGGTACGCAGGCGGCTGGCATCGGCAAAATGGGTATATTTGCCAAACGCGTCCATCACTAc                                                         <  2:497675/143‑1 (MQ=255)                                                                                      cgccgccATTTGGGCGGCTTTTTGTTTTTTATAGCTCAACGCTGCTGCCGGCACAGGCATCACTTTACCGGTTTCAATCCAGGTACGCAGGCAGCTCTAATCTGCAAAATGGGTATATTTGCCAAGCGCGTATATCAATActc                                                       >  2:1081837/1‑141 (MQ=255)                                                                                       gccgccATTTGGGCGGCTTTTTGTTTTTTATAGCTCAACGCTGCTGCCGGCACAGGCATCACTTTACCGGTTTCAATCCAGGTACGCAGGCGGCTGTCATCGGCAAAATGGGTATATTTGCCAAACGCGGCCATCACTACCAg                                                      >  2:1148543/1‑143 (MQ=255)                                                                                        ccgccATTTGGGCGGCTTTTTGTTTTTTATAGCTCAACGCTGCTGCCGGCACAGGCATCACTTTACCGGTTTCAATCCAGGTACGCAGGCGGCTGGCATCGGCAAAATGGGTATATTTGCCAAACGCGTCCATCACTACCAgc                                                     <  2:515331/143‑1 (MQ=255)                                                                                         cgccATTTGGGCGGCTTTTTGTTTTTTATAGCTCAACGCTGCTGCCGGCACAGGCATCACTTTACCGGTTTCAATCCAGGTACGCAGGCGGCTGGCATCGGCAAAATGGGTATATTTGCCAAACGCGTCCATCACTACCAgcg                                                    >  1:736212/1‑143 (MQ=255)                                                                                          gccATTTGGGCGGCTTTTTGTTTTTTATAGCTCAACGCTGCTGCCGGCACAGGCATCACTTTACCGGTTTCAATCCAGGTACGCAGGCGGCTGGCATCGGCAAAATGGGTATATTTGCCAAACGCGTCCATCACTACCAgcgc                                                   <  1:861574/143‑1 (MQ=255)                                                                                          gccATCTGGGCGGCTTTTTGTTTTTTACAGCCCAACGCTGCTGCCGGCACAGGCATCACTTTACCGGTTTCAATCCAGGTACGCAGGCGGCTGGCATCGGCAAAATGGGTATATTTGCCAAACGCGTCCATCACTACCAgcgc                                                   <  1:678535/143‑1 (MQ=255)                                                                                           ccATTTGGGCGGCTTTTTGTTTTTTATAGCTCAACGCTGCTGCCGGCACAGGCATCACTTTACCGGTTTCAATCCAGGTACGCAGGCGGCTGGCATCGGCAAAATGGGTATATTTGCCAAACGCGTGCATCCATACCAGCGcc                                                  >  1:15146/1‑143 (MQ=255)                                                                                            cATTTGGGCGGCTTTTTGTTTTTTATAGCTCAACGCTGCTGCCGGCACAGGCATCACTTTACCGGTTTCAATCCAGGTACGCAGGCGGCTGGCATCGGCAAAATGGGTATATTTGCCACACGCGTCCATCACTACCAgcgcga                                                 >  2:109537/1‑141 (MQ=255)                                                                                                   gcggcTTTTTGTTTTTTATAGCTTAACGCTGCTGCCGGCACAGGCATCACTTTACCGGTTTCAATCCAGGTCCGCCGGCGGCTGGCCTCGGCGAAATGGGTATATTTGCCAAACGCTTCCATGACCCCCCTCGCCACCGGttt                                          >  2:400457/1‑143 (MQ=255)                                                                                                   gcggcTTTTTGTTTTTTATAGCTCAACGCTGCTGCCGGCACAGGCATCACTTTTCCGGTTTCAATCCAGTTTCGCAGGCGGCTCGCATATTCAACTTGGGTATTTTTGCCACACGCTTCCCTAGCTACCTGTGTCCCCGGttt                                          >  2:339613/1‑143 (MQ=255)                                                                                                    cggcTTTTTGTTTTGTATAGCTCAACGCTGCTGCCGGCACAGGCATCACTTTACCGGTTTCAATCCAGGTACGCAGGCGGCTGGCATCGGCAAAATGGGTATATTTGCCAAACGCGTCCATCACTACCAGCGCCACCGGTtta                                         <  1:628176/143‑1 (MQ=255)                                                                                                     ggcTTTTTGTTTTTTATAGCTCAACGCTGCTGCCGGCACAGGCATCACTTTACCGGTTTCAATCAAGGTACGCAGGCGGCTGGCATCGGCAAAATGGGTATATTTGAAAAACGCGTCCATCACGAACAGCACCAGCggggtag                                        >  1:111106/1‑138 (MQ=255)                                                                                                       cTTTTTGTTTTTTATAGCTCAACGCTGCTGCCGGCACAGGCATCACTTTACCGGTTTCAATCCAGGTACGCAGGCGGCTGGCATCGGCAAAATGGGTATATTTGCCAAACGCGTCCATCACTACCAGCGCCACCGGTttatta                                      <  1:1016579/143‑1 (MQ=255)                                                                                                       cTTTTTGTTTTTTATAGCTCAACGCTGCTGCCGGCACAGGCATCACTTTACCGGTTTCAATCCAGGTACGCAGGCGGCTGGCATCGGCAAAATGGGTATATTTGCCAAACGCGTCCATCACTACCAGCGCCACCGGGttatta                                      >  1:1054295/1‑143 (MQ=255)                                                                                                        tttttGTTTTTTATAGCTCAACGCTGCTGCCGGCACAGGCATCACTTTACCGGTTTCAATCCAGGTACGCAGGCGGCTGGCATCGGCAAAATGGGTATATTTGCCAAACGCGTCCATCACTACCAGCGCCACCGGTTtattat                                     >  1:1051662/1‑143 (MQ=255)                                                                                                        tttttGTTTTTTATAGCTCAACGCTGCTGCCGGCACAGGCATCACTTTACCGGTTTCAATCCAGGTACGCAGGCGGCTGGCATCGGCAAAATGGGTATATTTGCCAAACGCGTCCATCACTACCAGCGCCACCGGTTtattat                                     >  1:516575/1‑143 (MQ=255)                                                                                                          tttGTTCTTTATAGCTCAACGCTGCTGCCGGCACAGGCATCACTTTACCGGTTTCAATCCAGGTACGCAGGCGGCTGGCATCGGCAAAATGGGTATATTTGCCAAACGCGTCCATCACTACCAGCGCCACCGGTTTATTATTg                                   <  1:623398/143‑1 (MQ=255)                                                                                                          ttggTTTTTTATAGCTCAACGCTGCTGCCGGCACAGGCATCACTTTACCGGTTTCAATCCAGGTACGCAGGCGGCTGGCATCGGCAAAATGGGTATATTTGCCAAACGCGTCCATCACTACCAGCGCCACCGGTTTATTATTg                                   <  1:395008/140‑1 (MQ=255)                                                                                                              ttttttATAGCTCAACGCTGATGCCGGCACAGGCATCACTTTACCGGTTTCAATCCAGGTACGCAGGCGGCTGGCATCGGCAAAATGGGTATATTTGCCAAACGCGTCCATCACTACCCGCGCCACCGGCTTATTATTGATaa                               >  2:711195/1‑143 (MQ=255)                                                                                                                ttttATAGCTCAACGCTGCTGCCGGCACAGGCATCACTTTACCGGTTTCAATCCAGGTACGCAGGCGGCTGGCATCGGCAAAATGGGTATATTTGCCAAACGCGTCCATCACTACCAGCGCCACCGGGCTATTATAGATAAcc                             >  2:769382/1‑143 (MQ=255)                                                                                                                  ttATAGCTCAACGCTGCTGCCGGCACAGGCATCACTTTACCGGTTTCAATCCAGGTACGCAGGCGGCTGGCATCGGCAAAATGGGTATATTTGCCAAACGCGTCCCTCACGACCAGCGCCACCGGAATAGCGTTGATAACTGt                           >  2:277463/1‑143 (MQ=255)                                                                                                                    ataGCTCAACGCTGCTGCCGGCACAGGCATCACTTTACCGGTTTCAATCCAGGTACGCAGGCGGCTGGCATCGGCAAAATGGGTATATTTGCCAAACGCGTCCATCACTACCAGCGCCACCGGTTTATTATTGATAACCGTAc                         <  2:859709/143‑1 (MQ=255)                                                                                                                                         cacaGGCATCACTTTACCGGTTTCAATCCAGGTACGCAGGCGGCTGGCATCGGCAAAATGGGTATATTTGCCAAACGCGTCCATCACTACCAGCGCCACCGGTTTATTATTGATAACCGTACGCATAACCAGACAACGGCccg    >  2:3914/1‑143 (MQ=255)                                                                                                                                          acaGGCATCACTTTACCGGTTTCAATCCAGGTACGCAGGCGGCTGGCATCGGCAAAATGGGTATATTTGCCAAACGCGTCCATCACTACCAGCGCCACCGGTTTATTATTGATAACCGTACGCATCACCAGACAATGGCccgc   >  1:689784/1‑143 (MQ=255)                                                                                                                                          acaGGCATCACTTTACCGGTTTCAATCCAGGTACGCAGGCGGCTGGCATCGGCAAAATGGGTATATTTGCCAAACGCGTCCATCACTACCAGCGCCACCGGTTTATTATTGATAACCGTACGCATCACCAGACAATGGCccgc   >  1:241380/1‑143 (MQ=255)                                                                                                                                          acaGGCATCACTTTACCGGTTTCAATCCAGGTACGCAGGCGGCTGGCATCCGCAAAATGGGTATATGTGCCAAACGCGTGCATCACTACCAGCGCCACCGGTTTATTATTGCTAACCGTACGCGTCACCAGACACTGGCccgc   >  2:964992/1‑143 (MQ=255)                                                                                                                                           gatgCATCTCTTTCCAGGTTTCCTCCCTGTTACGCATGCTGCTCGTATTGGTAAAATGGGTATATTTGCTAAACGCGTCCATCACTACCAGCGTCACCGGTTTATTATTGATATCCTTACTCATCTCCAGACAATGGCccgcc  <  2:1064504/140‑1 (MQ=255)                                                                                                                                              |                                                                                                                                            AACTGGCAGGAAGTGGAGTAAAAATTACGGATGGCAGAGTATCGCCATCCGAATTCACTTAATCGTTCTGTGCCGTCTGCCCCGCCGCCGCCATTTGGGCGGCTTTTTGTTTTTTATAGCTCAACGCTGCTGCCGGCACAGGCATCACTTTACCGGTTTCAATCCAGGTACGCAGGCGGCTGGCATCGGCAAAATGGGTATATTTGCCAAACGCGTCCATCACTACCAGCGCCACCGGTTTATTATTGATAACCGTACGCATCACCAGACAATGGCCCGCC  >  NC_000913/2223880‑2224160

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.