BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	freq	annotation	gene	description
RA	NC_000913	3,686,539	T→C	10.9%	S879G (AGC→GGC)	bcsC ←	cellulose synthase subunit

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	3,686,539	0	T	C	10.9%	268.7 / 2.8	113	S879G (AGC→GGC)	bcsC	cellulose synthase subunit
Reads supporting (aligned to +/- strand): ref base T (47/48); new base C (6/9); total (55/58)
Fisher's exact test for biased strand distribution p-value = 5.84e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 114 total aligned reads displayed.

CTTTATCGTAGCTCAGACTTAGCCCCACACCGTCGGCACGTACGCCACCCCATTTTTTCCCGGTATTGCTCGGGGAGTCTTTTTGCCCACCAAAGGCCAGCAAAGAACTGGAGAT‑G‑GGCCG‑ACGGTGGGCGTTAACGGTGTAACCCAG‑CGGCCCGA‑TATCATCGCTGTAA‑CTGATGCCGCCG‑ACCACATCCACCACGTTGAAGCCCATCGGCGTGGTAC‑CGATATCCCAGCTCCAGACGTCATTTCGCCAGCCGACCGCCACGCTGGCACCGGAATCCGACTGGCTGCGGTTGCCGCTACAGTCCTGTAATGTACAGGTGCCCCAGTTGTCATCCCATTTGCCATCGGCATTAGTGGAGAAACTGCCGACGTTCATATTGACGAAATCACTGCGAAAGAACATCCGCCCGTCAGAATACGGCGCATCCACCTGCAACATGGTAGTGTGCGCTTTCAGATCGGAGTAACC  >  NC_000913/3686308‑3686776

cTTTATCGTAGCTCAGACTTAGCCCCACACCGTCGGCACGTACGCCACCCCATTTTTTCCCGGTATTGCTCGGGGAGTCTTTTTGCCCACCAAAGGCCAGCAAAGAACTGGAGAT‑G‑GGCCG‑ACGGTGGGCGTTAACGGTGTAACCCAG‑CGGCCCGA‑TATCATCGCTGTAC‑CTGATGCCGCCG‑GCCACATCCACCACGTTGACGCCCATCGGGTTGGTAC‑CGGTATCCCAGCTCCAGCCg                                                                                                                                                                                                                                        >  1:64598/1‑239 (MQ=255)

  ttATCGTAGCTCAGACTTAGCCCCACACCGTCGGCACGTACGCCACCCCATTTTTTCCCGGTATTGCTCGGGGAGTCTTTTTGCCCACCAAAGGCCAGCAAAGAACTGGAGAT‑G‑GGCCG‑ACGGTGGGCGTTAACGGTGTAACCCAG‑CGGCCCGA‑TATCATCGCTGTAA‑CTGATGCCGCCG‑ACCCCATCCACCACGGTGAAGCCCATCGGCGTGGGAC‑CGACACCCCACCCCCAAACggc                                                                                                                                                                                                                                      >  2:628891/1‑237 (MQ=255)

   tATCGTAGCTCAGACTTAGCCCCACACCGTCGGCACGTACGCCACCCCATTTTTTCCCGGTATTGCTCGGGGAGTCTTTTTGCCCACCAAAGGCCAGCAAAGAACTGGAGAT‑G‑GGCCG‑ACGTTGGGCGTTAACGGTGTAACCCAG‑CGGCCCGA‑TATCATCGCTGGAA‑CTGCTG‑CGCCGCACCCAATCCCCCCCGTTGAAGACCATCGGCCGGGTAC‑GCGTAGCCCAGCACCacgctcca                                                                                                                                                                                                                                     >  2:807911/1‑232 (MQ=255)

        tAGCTCAGACTTAGCCCCACACCGTCGGCACGTACGCCACCCCATTTTTTCCCGGTATTGCTCGGGGAGTCTTTTTGCCCACCAAAGGCCAGCAAAGAACTGGAGAT‑G‑GGCCG‑ACGGTGGGCGTTAACGGTGTAACCCAG‑CGGCCCGA‑TATCATCGCTGTAA‑CTGATGCCGCCG‑ACCACATCCACCACGTTGAAGCCCATCGGCGTGGACC‑CGGAATCCCCGCCCCAGACGTCATTTc                                                                                                                                                                                                                                 >  1:378877/1‑238 (MQ=255)

          gCTCAGACTTAGCCCCACACCGTCGGCACGTACGCCACCCCATTTTTTCCCGGTATTGCTCGGGGAGTCTTTTTGCCCACCAAAGGCCAGCAAAGAACTGGAGAT‑G‑GGCCG‑ACGGTGGGCGTTAACGGTGTAACCCAG‑CGGCCCGA‑TATCATCGCTGTAA‑CTGATGCCGCCG‑AACCCATCCCCCCCGTTGAAGCCCATCGGCGGGGGCA‑CGATACCCCACCCCCAGACgcactttcccc                                                                                                                                                                                                                              >  2:1123690/1‑229 (MQ=255)

                aCTTAGCCCCACACCGTCGGCACGTACGCCACCCCATTTTTTCCCGGTATTGCTCGGGGAGTCTTTTTGCCCACCAAAGGCCAGCAAAGAACTGGAGAT‑G‑GGCCG‑ACGGTGGGCGTTAACGGTGTAACCCAG‑CGGCCCGA‑TATCATCGCTGTAA‑CTGATGCCGCCG‑ACCACATCCACCCCGTTTAAGCCCATCGGCGTGGGAC‑CGATATCCCAGCTCCAGCCGGCATTTcccaacccc                                                                                                                                                                                                                         >  2:364215/1‑230 (MQ=255)

                   ttaacgcccacCGTCGGCACGTACGCCACCCCATTTTTTCCCGGTATTGCTCGGGGAGTCTTTTTGCCCACCAAAGGCCAGCAAAGAACTGGAGAT‑G‑GGCCG‑ACGGTGGGCGTTAACGGTGTAACCCAG‑CGGCCCGA‑TATCATCGCTGTAA‑CTGATGCCGCCG‑ACCACATCCCCCACGTTGAAGCCCATCGGCGTGGGAC‑CGCAATCCCAGCTCCAGCCGTCATTTCCCCAGCCGAcc                                                                                                                                                                                                                      >  1:502747/9‑238 (MQ=255)

                    aGCCCCACACCGTCGGCACGTACGCCACCCCATTTTTTCCCGGTATTGCTCGGGGAGTCTTTTTGCCCACCAAAGGCCAGCAAAGAACTGGAGAT‑G‑GGCCG‑ACGGTGGGCGTTAACGGTGTAACCCAG‑CGGCCCGA‑TATCATCCCTGTAA‑CTGATGCCGCCG‑AACCCATCCACCACGTTGAAGCCCATCGGCGGGGTCC‑CGATATCCCAGCACCAACCGGCTTTTCCCCAGCCgcacgc                                                                                                                                                                                                                    >  1:472884/1‑234 (MQ=255)

                     gCCCCACACCGTCGGCACGTACGCCACCCCATTTTTTCCCGGTATTGCTCGGGGAGTCTTTTTGCCCACCAAAGGCCAGCAAAGAACTGGCGAT‑G‑GGCCG‑ACGGTGGGCGTTAACGGTGTAACCCAG‑CGTCCCGA‑TATCATCGCTGTAA‑CTGCTGCCGCCG‑ACCACATCCACCCCGTTGAAGCCCACCGGCGTGGTAC‑CACTATCCCCCACCCAAACGTAATTTCACCaaacggccca                                                                                                                                                                                                                    >  2:572466/1‑229 (MQ=255)

                     gCCCCACACCGTCGGCACGTACGCCACCCCATTTTTTCCCGGTATTGCTCGGGGAGTCTTTTTGCCCACCAAAGGCCAGCAAAGAACTGGAGAT‑G‑GGCCG‑ACGGTGGGCGTTAACGGTGTAACCCAG‑CGGCCCGA‑TATCATCGCTGTAA‑CTGATGCCGCCG‑ACCACATCCACCACGTTGAAGCCCATCGGCGTGGTAC‑CGAAATCCCAGCTCCAGACGTCATTTCGCCAGCCGACCGc                                                                                                                                                                                                                    >  1:104484/1‑238 (MQ=255)

                          acacCGTCGGCACGTACGCCACCCCATTTTTTCCCGGTATTGCTCGGGGAGTCTTTTTGCCCACCAAAGGCCAGCAAAGAACTGGAGAT‑G‑GGCCG‑ACGGTGGGCGTTAACGGTGTAACCCAG‑CGGCCCGA‑TATCATCGCTGTAA‑CTGATGCCGCCG‑ACCACATCCACCACGTTGAAGCCCATCGGGGTGGTAC‑CGCTATCCCAGATCCAGCCGTCATTTCGCCAGCCGACCCCCAc                                                                                                                                                                                                                 >  1:641509/1‑236 (MQ=255)

                          acacCGTCGGCACGTACGCCACCCCATTTTTTCCCGGTATTGCTCGGGGAGTCTTTTTGCCCACCAAAGGCCAGCAAAGAACTGGAGAT‑G‑GGCCG‑ACGGTGGGCGTTAACGGTGTAACCCAG‑CGGCCCGA‑TATCATCGCTGTAA‑CTGATGCCGCCG‑ACCACATCCACCACGTTGAAGCCCATCGCCGT‑GTACACGAACTCCCACACCCAGACGTCATTTCCCCAACCAACCCCCAccc                                                                                                                                                                                                               >  2:1046313/1‑236 (MQ=255)

                            acCGTCGGCACGTACGCCACCCCATTTTTTCCCGGTATTGCTCGGGGAGTCTTTTTGCCCACCAAAGGCCAGCAAAGAACTGGAGAT‑G‑GGCCG‑ACGGTGGGCGTTAACGGTGTAACCCAG‑CGGCCCGA‑TATCATCGCTGTAA‑CTGATGCCGCCG‑ACCACATCCACCACGTTGAAGCCCATCGGCGTGGTAC‑CGCAATCCCAGCTCCAGACGTCATTTCGCCAGCCGACCGCCCCGCtt                                                                                                                                                                                                             >  1:541639/1‑237 (MQ=255)

                               gTCGGCACGTACGCCACCCCATTTTTTCCCGGTATTGCTCGGGGAGTCTTTTTGCCCACCAAAGGCCAGCAAAGAACTGGAGAT‑G‑GGCCG‑ACGGTGGGCGTTAACGGTGTAACCCAG‑CGGCCCGA‑TATCATCGCTGTAA‑CTGATGCCGCCG‑CCCACATCCACCACGTTGAAGCCCATCGGCGTGGTAC‑CGATATCCCAGCTCCAGACGTCATTTCGCCAGCCGACCGCCACGCTGGCAc                                                                                                                                                                                                         <  1:364215/239‑1 (MQ=255)

                                tCGGCACGTACGCCACCCCATTTTTTCCCGGTATTGCTCGGGGAGTCTTTTTGCCCACCAAAGGCCAGCAAAGAACTGGAGAT‑G‑GGCCG‑ACGGTGGGCGTTAACGGTGTAACCCAG‑CGGCCCGA‑TATCATCGCTGTAA‑CTGATGCCGCCG‑ACCACATCCACCACGTTGAAGCCCATCGGCGTGGTAC‑CGATATCCCAGCTCCAGACGTCCTTTCGCCAGCCGACCGCCACGCTGGCAcc                                                                                                                                                                                                        >  1:694552/1‑239 (MQ=255)

                                tCGGCACGTACGCCACCCCATTTTTTCCCGGTATTGCTCGGGGAGTCTTTTTGCCCACCAAAGGCCAGCAAAGAACTGGAGAT‑G‑GGCCG‑ACGGTGGGCGTTAACGGTGTAACCCAG‑CGGCCCGA‑TATCATCGCTGTAA‑CTGATGCCGCCG‑ACCACATCCACCACGTTGAAGCCCATCGGCGTGGTAC‑CGATATCCCAGCTCCAGACGTCATTTCGCCAGCCGCCCGCCACCCTGGCAcc                                                                                                                                                                                                        >  1:1197277/1‑239 (MQ=255)

                                         accccccccaATTTTCTCCCGTTCTTGCGGGGGGACTCTTTTCTCCCACCAAAGCGCAGCAAA‑AAATGGGGTC‑GTGGCCG‑CAGGTGGCGGTTACCGTGGTAACCCCG‑CGGCCCGA‑TATCACCCTGGTAA‑CTGATGCCGCCG‑ACCACACCCACCACGTTGAAGCCCAGCGGCGGGGTAC‑CGATATCCCAGCTCCAGCCGTCATTGCGCCAGCCGACCGCCACGCTGGCACCGGAATCCGa                                                                                                                                                                                               <  2:64598/233‑1 (MQ=255)

                                                    ttttttCCCGGTATTGCTCGGGGAGTCTTTTTGCCCACCAAAGGCCAGCAAAGAACTGGAGAT‑G‑GGCCG‑ACGGTGGGCGTTAACGGTGTAACCCAG‑CGGCCCGA‑TATCATCGCTGTAA‑CTGATGCCGCCG‑ACCACATCCACCACGTTGAAGCCCATCGGCGTGGTAC‑CGATATCCCAGCTCCAGACGTCATTTCGCCAGCCGACCGCCACGCTGGCACCGGAATCCGACTGGCTGCGGt                                                                                                                                                                                    <  1:1092853/239‑1 (MQ=255)

                                                    ttttttCCCGGTATTGCCCGGGGGATCTTTTTGCCCACCAAAGGCCAGCAAAGAACTGGAGAT‑G‑GGCCG‑ACGGTGGGCGTTAACGGTGTAACCCAG‑CGGCCCGA‑TATCATCGCTGTAA‑CTGATGCCGCCG‑ACCACATCCACCACGTTGAAGCCCATCGGCGTGGTAC‑CGATATCCCAGCTCCAGACGTCATTTCGCCAGCCGACCGCCACGCTGGCACCGGAATCCGACTGGCTGCGGt                                                                                                                                                                                    <  1:1141189/239‑1 (MQ=255)

                                                    ttttttCCCGGGTTTTCCCGGGGAGTCTTTTTGCCCCCCAAAGGCCAGCAAAGAACTGGAAAT‑G‑GGCCG‑ACGGTGGGCGTTAACGGTGTAACCCAG‑CGGCCCGA‑TATCATCGCTGTAA‑CTGATGCCGCCG‑ACCACATCCACCACGTTGAAGCCCATCGGCGTGGTAC‑CGATATCCCAGCTCCAGACGTCATTTCGCCAGCCGACCGCCACGCTGGCACCGGAATCCGACTGGCTGCGGt                                                                                                                                                                                    <  1:831142/239‑1 (MQ=255)

                                                       tttCCCTGTTTTGCGGGGGGGGTTTTTTTCGCCCCCAAGGGCCGAAAAAGACGTGGATGT‑G‑GGCCA‑GGGGGGGGGATTAACGGTGTACCCACG‑CGGCCCGG‑TATCATCGCTGTAA‑CTGATGCCGCCC‑ACCCCACCCACCACGTTGAACCCCATCGCGGTGTAAC‑CGATCTCCCAGCTCCAGGCGTCATTTCGCCAGCCGACCGCCCCGCTGGCACCGGAATCCGACTGGCTGCGGTTGc                                                                                                                                                                                 <  2:360372/239‑1 (MQ=255)

                                                       tttCCCGGTTTTGCTCGGGGATTCTTTTTGCCCACCAAAGGCCAGCAAAGAACTGGAGAT‑G‑GGCCG‑ACGGTGGGCGTTAACGGTGTAACCCAG‑CGGCCCGA‑TATCATCGCTGTAA‑CTGATGCCGCCG‑ACCACATCCACCACGTTGAAGCCCATCGGCGTGGTAC‑CGATATCCCAGCTCCAGACGTCATTTCGCCAGCCGACCGCCACGCTGGCACCGGAATCCGACTGGCTGCGGTTGc                                                                                                                                                                                 <  1:484695/239‑1 (MQ=255)

                                                       tttCCCGGTATTGCTCGGGGAGTCTTTTTGCCCACCAAAGGCCAGCAAAGAACTGGAGAT‑G‑GGCCG‑ACGGTGGGCGTTAACGGTGTAACCCAG‑CGGCCCGA‑TATCATCGCTGTAA‑CTGATGCCGCCG‑ACCACATCCACCACGTTGAAGCCCATCGGCGTGGTAC‑CGATATCCCAGCTCCAGACGTCATTTCGCCAGCCGACCGCCACGCTGGCACCGGAATCCGACTGGCTGCGGTTGc                                                                                                                                                                                 <  1:1123690/239‑1 (MQ=255)

                                                       tttCCCGGTATTGCGCGGGGAGTCTTTTTCCCCACCAAAGGCCAGCAAAGAACTGGATAT‑G‑GGCCG‑ACGGTGGGCTTTAACGGTGTAACCCAG‑CGGCCCGA‑TATCATCGCTGTAA‑CTGATGCCGCCG‑ACCACATCCACCACGTTGAAGCCCATCGGCGTGGTAC‑CGATATCCCAGCTCCAGACGTCATTTCGCCAGCCGACCGCCACGCTGGCACCGGAATCCGACTGGCTGCGGTTGc                                                                                                                                                                                 <  1:1027110/239‑1 (MQ=255)

                                                       ttccccGGTTTTGCTGGGGGGGTTTTTTTGCCCCCCAAAGGGCACAAAAGACTGGGGGAT‑G‑GGCCG‑ACGGTGGGCTTTAACGGTGTAACCCAG‑CGGCCCGA‑TATCATCGCTGTAA‑CTGATGCCGCCG‑CCCACCTCCCCCCCGTTGAAGCCCATCGGCGTGGTAC‑CGATACCCCAGCTCCAGACGTCATTTCGCCAGCCGACCGCCACGCTGGCACCGGAATCCGACTGGCTGCGGTTGc                                                                                                                                                                                 <  2:348422/236‑1 (MQ=255)

                                                          cccGGTATTGCTCGGGGAGTCTTTTTGCCCACCAAAGGCCAGCAAAGAACTGGAGAT‑G‑GGCCG‑ACGGTGGGCGTTAACGGTGTAACCCAG‑CGGCCCGA‑TATCATCGCTGTAA‑CTGATGCCGCCG‑ACCACATCCACCACGTTGAAGCCCATCGGCGTGGTAC‑CGATATCCCAGCTCCAGACGTCATTTCGCCAGCCGACCGCCCCGCTGGCACCGGAATCCGACTGGCTGCGGTTGCCGc                                                                                                                                                                              >  1:296576/1‑239 (MQ=255)

                                                          cccGGTATTGCTCGGGGAGTCTTTTTGCCCACCAAAGGCCAGCAAAGAACTGGAGAT‑G‑GGCCG‑ACGGTGGGCGTTAACGGTGTAACCCAG‑CGGCCCGA‑TATCATCGCTGTAA‑CTGATGCCGCCG‑ACCACATCCACCACGTTGAAGCCCATCCGCGTGGTAC‑CGATATCCCAGCTCCAGACGTCATTTCGCCAGCCGACCGCCACGCTGGCCCCGGAATCCGACTGGCTGCGGTTTccc                                                                                                                                                                               >  1:38768/1‑237 (MQ=255)

                                                            ggttgtggCTCGGGGGGTCTTTTTCCCCTCAAAAGCCAAGCAAAGAACTGCAGAG‑T‑GGCGC‑TGTGTGGGCGGTAACCGTGTAACCGCG‑CGGCCCGA‑TAACATCGCTGTAA‑CGGATGCCGCCG‑ACCACATCCCCCACGTTGAAGCCCCTCGGGGTGGTCC‑CGATCCCCCAGCTCCAGACGTCATTCCCCCAGCCGACCGCCACGCTGGCACCGGAATCCGACTGGCTGCGGTTGCCGCTa                                                                                                                                                                            <  2:824540/232‑1 (MQ=255)

                                                            ccgtttttcTCGGGGGGTCTTTTTGCCCACAAAAGGCCAGAAAAGAACT‑GAGCTGG‑GGCCG‑CCGGGGGGCGTTACCGGTTAAACCCGG‑CGGCCCGA‑TATCATCGCTGTAA‑CTGAGGCCGCCG‑CCCACACCCACCACGTTGAAGCCCATCGGCGTGGTAC‑CGATATCCCAGCCCCAGACGTCATTTCGCCAGCCGACCGCCACGCTGGCACCGGAATCCGACTGGCTGCGGTTGCCGCTa                                                                                                                                                                            <  2:1071437/231‑1 (MQ=255)

                                                            cGGTTTTGGCCGGGGGGTCTTTTGGCCCACCAAAGGCCAGAAAAGAACTGGAGAT‑G‑GGCCG‑ACGGTGGGCGTTAACGGTGTAACCCAG‑CGGCCCGA‑TATCATCGCTGTAA‑CTGATGCCGCCG‑ACCACATCCACCACGTTGAAGCCCATCGGCGTGGTAC‑CGATATCCCAGCTCCAGACGTCATTTCGCCAGCCGACCGCCACGCTGGCACCGGAATCCGACTGGCTGCGGTTGCCGCTa                                                                                                                                                                            <  1:628891/239‑1 (MQ=255)

                                                            cGGTATTGCGCGGGGAGTCTTTTTGCCCACCAAAGGCCAGCAAAGAACTGGAGAT‑G‑GGCCG‑ACGGTGGGCGTTAACGGTGTAACCCAG‑CGGCCCGA‑TATCATCGCTGTAA‑CTGATGCCGCCG‑ACCACATCCACCACGTTGAAGCCCATCGGCGTGGTAC‑CGATATCCCAGCTCCAGACGTCATTTCGCCAGCCGACCGCCACGCTGGCACCGGAATCCGACTGGCTGCGGTTGCCGCTa                                                                                                                                                                            <  1:1264409/239‑1 (MQ=255)

                                                            cGGTATTGCCCGGGGAGTCTTTTTGCCCACCAAAGGCCAGCAAAGAACTGGAGAT‑G‑GGCCG‑ACGGTGGGCTTTAACGGTTTAACCCAG‑CGGCCCGA‑TATCATCGCTGTAA‑CTGATGCCGCCG‑ACCACATCCACCACGTTGAAGCCCATCGGCGTGGTAC‑CGATATCCCAGCTCCAGACGTCATTTCGCCAGCCGACCGCCACGCTGGCACCGGAATCCGACTGGCTGCGGTTGCCGCTa                                                                                                                                                                            <  1:1272930/239‑1 (MQ=255)

                                                              gTATTGCTCGGGGAGTCTTTTTGCCCACCAAAGGCCAGCAAAGAACTGGAGAT‑G‑GGCCG‑ACGGTTGGCGTTAACGGTGTAACCCAG‑CGGCCCGA‑TATCATCGCTGTAA‑CTGATGCCGCCG‑ACCACATCCACCCCGTTGAAGCCCATCGGCGTGGGAC‑CGATATCCCAGCCCCCGACGCCCTTTCGCCAGCCGACCGCCACCCCGGCCCCGGGACCCGACCGGCTGCggggggccgccac                                                                                                                                                                          >  2:1272930/1‑228 (MQ=255)

                                                                 ttGCTGGGGGGTTTTTTTTCCCCCCCAAAGGCCAAAAAAGAACGGGAGGT‑G‑GGCCG‑GGGGTGGGCGTTCAGGGGTGAACCCAG‑CGGCCCGA‑TATCCGCGCTGGAA‑CTGATGCCGCCG‑ACCACACCCCACACGTTGAAGCCCATCGGCGTGGTAC‑CGATATCCCAGCCCCAGACGTCATTTCGCCAGCCGACCGCCACGCTGGCACCGGAATCCGACTGGCTGCGGTTGCCGCTACAGTc                                                                                                                                                                       <  2:104484/239‑1 (MQ=255)

                                                                 ttGCTGGGGGGGTCTTTGGCCCCCACAAGGCCCAGAAATGACGTGGAGAG‑G‑GGCAG‑AGGTGGGGCGTTACCGGGGCACCCCAG‑GGGCCCGA‑TATCGTCGTTGTAA‑CCGACTCCGGCG‑ACCACTTCCACGCCGTGGAAGCCCATCGGCGGGGAGC‑CGATACCCCAGCTCCAGCCGGCATTTCGCCAGCCGACCGCCACGCTGGCACCGGAAGCCGACTGGCTGCGGTTGCCGCTACAGTc                                                                                                                                                                       <  2:21292/239‑1 (MQ=255)

                                                                 ttGCTCGGGGATTCTTTTTGCCCACCAAAGGCCAGCAAAGAACGGGAGAT‑G‑GGCCG‑GCGGTGGGCGTTAACGGTGTAACCCAG‑CGGCCCGA‑TATCATCGCTGTAA‑CTGATGCCGCCG‑ACCACATCCACCACGTTGAAGCCCATCGGCGTGGTAC‑CGATATCCCAGCTCCAGACGTCATTTCGCCAGCCGACCGCCACGCTGGCACCGGAATCCGACTGGCTGCGGTTGCCGCTACAGTc                                                                                                                                                                       <  1:1097049/239‑1 (MQ=255)

                                                                 ttGCTCGGGGAGTTTTTTTGCCCACCAAAGGCCAGCAAAGAACTGGAGAT‑G‑GGCCG‑AGGGTGGGCGTTAACGGTGTAACCCAG‑CGGCCCGA‑TATCATCGCTGTAA‑CTGATGCCGCCG‑ACCACATCCCCCACGTTGAAGCCCATCGGCGTGGTAC‑CGATATCCCAGCTCCAGACGTCATTTCGCCAGCCGACCGCCACGCTGGCACCGGAATCCGACTGGCTGCGGTTGCCGCTACAGTc                                                                                                                                                                       <  1:1006808/239‑1 (MQ=255)

                                                                 ttGCGCGGGGTGCTTTTTTGCCCCCCAGGGGCCAGCAAAAGTCGGGGGAT‑G‑GCCCG‑ACGGTGGGGGTTACCGGTTGAACCCGG‑CGGCCCGA‑TTCCATCGCTGTAA‑CTGATGCCGCCG‑ACCACATCCACCACGTTGAAGCCCATGGGCGTGGTAC‑CGATATCCCGGCTCCAGACGTCATTTCGCCAGCCGACCGCCACGCTGGCACCGGAATCCGACTGGCTGCGGTTGCCGCTACAGTc                                                                                                                                                                       <  2:378877/239‑1 (MQ=255)

                                                                    cTCGGGGAGTCTTTTTGCCCACCAAAGGCCAGCAAAGAACTGGAGAT‑G‑GGCCG‑ACGGTGGGCGTTAACGGTGTAACCCAG‑CGGCCCGA‑TATCATCGCTGTAA‑CTGATGCCGCCG‑ACCACATCCACCACGTTGAAGCCCATCGGCGTGGTAC‑CGCTTTCCCACCTCCAGACGGCATTTTGCCAGCCGACCGCCACCCTGGCACCGGCATCCGACCGCCCGCGGTAGCCGcccaaatcatc                                                                                                                                                                    >  2:142293/1‑229 (MQ=255)

                                                                     tCGGGGAGTCATTTTGCCCACCAAAGGCCAGCAAAGAACTGGAGAT‑G‑GGCCG‑ACGGTGGGCGTTAACGGTGTAACCCAG‑CGGCCCGA‑TATCATCGCTGTAA‑CTGATGCCGCCG‑ACCACATCCACCACGTTGAAGCCCATCGGCGTGGTAC‑CGATATCCCAGCTCCAGACGTCATTTCGCCAGCCGACCGCCACGCTGGCACCGGAATCCGACTGGCTGCGGTTGCCGCTACAGTCCTg                                                                                                                                                                    <  1:118163/238‑1 (MQ=255)

                                                                     ccGGGGAGTCTGTTTGCCAACCAAGGGCCAGCAAAGAACTGGAGAT‑G‑GGCCG‑ACGGTGGGCGTTAACGGTTTAACCCAC‑GGGCCCGA‑TTGCATCGCTGTAA‑CTGATGCCGCCG‑ACCACATCCACCACGTTGAAGCCCATCGGCGTGGTAC‑CGATATCCCAGCTCCAGACGTCATTTCGCCAGCCGACCGCCACGCTGGCACCGGAATCCGACTGGCTGCGGTTGCCGCTACAGTCCTg                                                                                                                                                                    <  1:98536/237‑1 (MQ=255)

                                                                       ggggggcttttttGCCCACCAAGGGCCAGCAAGGGAGAGGGGAG‑G‑GGCCG‑GGGGGGGGCGTTAACGGTGAAACCCAG‑CGGCCCAA‑TATCCTCGCTGTAA‑GTGATGCCGCGG‑GCCACATCCCCCACGTTGAGGCCCATCGGCGTGGTCC‑CGATATCCCAGCTCCAGACGTCATTTCGCCAGCCGACCGCCACGCTGGCACCGGAATCCGACTGGCTGCGGTTGCCGCTACAGTCCTGTa                                                                                                                                                                  <  2:236530/230‑1 (MQ=255)

                                                                         ggtatttttttGCTCCCCTAAGGCCAGCAAAGTTCGGTAGTT‑G‑GTCCG‑CCTTGTGGCGTTAACGTTGTAACCGCG‑CGGCCCAA‑TATCA‑CGGCGTAACCTGAGGCCGCCG‑CCACCAGCCAACACGTTGCAGCCCATCGGCGTGGTAC‑CGATAGCCCCACCCCCGACGTCATGTCCCCGGCCGACCGCCACGCTGGCACCGGAATCCGACTGGCTGCGGTTGCCGCTACAGTCCTGTAATg                                                                                                                                                               <  2:603940/233‑1 (MQ=255)

                                                                         ggAGTCTTTTTGCCCACCAAAGGCCAGCAAAGAACTGGAGAT‑G‑GGCCG‑ACGGTGGGCGTTAACGGTGTAACCCAG‑CGGCCCGA‑TATCATCGCTGTAA‑CTGATGCCGCCG‑ACCACATCCACCACGTTGAAGCCCATCGGCGTGGTAC‑CGATATCCCAGCTCCAGACGTCATTTCGCCAGCCGACCGCCACGCTGGCACCGGAATCCGACTGGCTCCGGTTGCCGCTACAGTCCCGTAAtt                                                                                                                                                               >  1:768568/1‑238 (MQ=255)

                                                                         ggAGTCTTTTTGCCCACCAAAGGCCAGCAAAGAACTGGAGAT‑G‑GGCCG‑ACGGTGGGCGTTAACGGTGTAACCCAG‑CGGCCCGA‑TATCATCGCTGTAA‑CTGATGCCGCCG‑ACCACATCCACCACGTTGAAGCCCATCGGCGTGGTAC‑CGATATCCCAGCTCCAGACGTCATTTCGCCAGCCGACCGCCACCCTGGCACCGGAATCCGACTGGCTGCGGTTGCCGCTCAAGTCCTGTAAtt                                                                                                                                                               >  1:514400/1‑238 (MQ=255)

                                                                             tttttttCCCCCCCAAAGCCCAACCAAG‑ACTGGGGGA‑G‑GGCCGCACGTTGGGACTTAAGCGTTAACCCCCG‑CGGCTCTA‑TATCATCGCTGTAA‑CTGACGGCGACT‑ACCACATCCACCACGTTGAGGCCCAGCGGCGTGGTAC‑CGATATCCCAGCTCCAGACCTCATTTCGCCAGCCGACCGCCACGCTGGCACCGGAATCCGACTGGCTGCGGTTGCCGCTACAGTCCTGTAATGTAc                                                                                                                                                            <  2:696/236‑1 (MQ=255)

                                                                               ttttgGCCCACCAAAGGCCAGCAAAGACCTGGAGAG‑G‑GGCCG‑AAGGTGGCCGTTAACGGTGTAACCCAG‑CGGCCCGA‑TATCATCGCTGTAA‑CTGATGCCGCCG‑ACCACATCCACCACGTTGAAGCCCATCGGCGTGGTAC‑CGATATCCCAGCTCCAGACGTCATTTCGCCAGCCGACCGCCACGCTGGCACCGGAATCCGACTGGCTGCGGTTGCCGCTACAGTCCTGTAATGTACAgg                                                                                                                                                         <  1:962760/239‑1 (MQ=255)

                                                                                    tgccaccaAAGGCCAGCAAAGAACTGGAGAT‑G‑GGCCG‑ACGGTGGGCGTTAACGGTGTAACCCAG‑CGGCCCGA‑TATCATCGCTGTAA‑CTGATGCCGCCG‑ACCACATCCACCACGTTGAAGCCCATCGGCGTGGTAC‑CGATATCCCAGCTCCAGACGTCATTTCGCCAGCCGACCGCCACGCTGGCACCGGAATCCGACTGGCTGCGGTTGCCGCTACAGTCCTGTAATGTACAGGTGccc                                                                                                                                                    <  1:742735/237‑1 (MQ=255)

                                                                                    gCCCACAAAAGGCCAGCAAAGAACTGGAGAT‑G‑GGCCG‑ACGGTGGGCGTTAACGGTGTAACCCAG‑CGGCCCGA‑TATCATCGCTGTAA‑CTGATGCCGCCG‑ACCACATCCACCACGTTGAAGCCCATCGGCGTGGTAC‑CGATATCCCAGCTCCAGACGTCATTTCGCCAGCCGACCGCCACGCTGGCACCGGAATCCGACTGGCTGCGGTTGCCGCTACAGTCCTGTAATGTACAGGTGccc                                                                                                                                                    <  1:807911/239‑1 (MQ=255)

                                                                                            acgcccAGCAAAGATTGGGATAT‑G‑GGCCG‑ACGGGGGGC‑TTAACCGTGGACCCCCG‑CCGGCCGAGTAACCTCGCTGGAG‑CTGATGCCGCCG‑ACCACTCCCCCCACGTGGACGCCCCGCGGCGTGGCAC‑TGATATCCCAGCCCCAGACTTCATTTCGCCAGCCGACCGCCACGCTGGCACCGGAATCCGACTGGCTGCGGTTGCCGCTACAGTCCTGTAATGTACAGGTGCCCCAGTTGTc                                                                                                                                            <  2:681819/235‑1 (MQ=255)

                                                                                                  aGCAAAGAACTGGAGAT‑G‑GGCCG‑ACGGTGGGCGTTAACGGTGTAACCCAG‑CGGCCCGA‑TATCATCGCTGTAA‑CTGATGCCGCCG‑ACCACATCCACCACGTTGAAGCCCATCGGCGTGGTAC‑CGATATCCCAGCTCCAGACGTCATTTCGCCAGCCGACCGCCACGCTGGCACCGGAATCCGACTGGCTGCGGGTGCCGCTACAGTCCTGTAATGTACAGGTGCCCCAGTTGTCATCCCa                                                                                                                                      >  1:372201/1‑239 (MQ=255)

                                                                                                         tatggggagt‑G‑GGCAG‑GCGGTGGGTGTTAACGGTTAACCCCGG‑CGGCCCGA‑TACCATCGCTGTAA‑CTGATGCCCCCG‑ACCCCCTCCCCCACCTTGAAGCCCATGGGGGGGGTCC‑CGATATCCCAGCTCCAGACGTCATTTCGCCAGCCGACCGCCACGCTGGCACCGGAATCCGACTGGCTGCGGTTGCCGCTACAGTCCTGTAATGTACAGGTGCCCCAGTTGTCATCCCATTTGCCa                                                                                                                               <  2:1197277/230‑1 (MQ=255)

                                                                                                              gagaT‑G‑GGCCG‑ACGGTGGGCGTTAACGGTGTAACCCAG‑CGGCCCGA‑TATCATCGCTGTAA‑CTGATGCCGCCG‑ACCACATCCACCACGTTGAAGCCCATCGGCGTGGTAC‑CGAAATCCCAGCTCCAGACGTCATTTCGCCAGCCGACCGCCACGCTGGCACCGGCATCCGCCTGGCTGCGGTGTCCGCCACAGTCCTGGAATGGACAGGTGCCCCAGTTGTCATCCCATTTGCCACCggg                                                                                                                          >  2:913939/1‑238 (MQ=255)

                                                                                                                   tggcgCCG‑ACGGTGGGCGTTTATGGT‑TAACCCCGACCGCCCGA‑TCAGCTCGCTGCAA‑CTGAGGCCGCCT‑ACGCGTCCCACCTCGTTGAAGCCCATCGGCTGGGCAA‑GGAGCACCAGCCGCCAGACTTCATTTACACGGCCGACCGCCACGCTGGCACCGGTATCCGACTGGCTGCGGTTGCCGCTACAGTCCTGTAATGTACAGGTGCCCCAGTTGTCATCCCATTTGCCATCGGCAt                                                                                                                        <  2:694552/234‑1 (MQ=255)

                                                                                                                    g‑ggCCG‑ACGGTGGGCGTTAACGGTGTAACCCAG‑CGGCCCGA‑TATCATCGCTGTAA‑CTGATGCCGCCG‑ACCACATCCACCACGTTGAAGCCCATCGGCGTGGTAC‑CGATATCCCAGCTCCAGACGCCATTTCGCCACCCGACCGCCACGCTGGCCCCGGAATCGCACTGCCCGCGGTTGACGCTACCGTCCCGTACATTCCAGGTCCCCCATTTGCCATCCCCTTTTcccccgcccttat                                                                                                                     >  2:1070261/1‑228 (MQ=255)

                                                                                                                            aCGGTGGGCGTTAACGGTGTAACCCAG‑CGGCCCGA‑TATCATCGCTGTAA‑CTGATGCCGCCG‑ACCACATCCACCACGTTGAAGCCCATCGGCGTGGTAC‑CGATATCCCAGCTCCAGACGTCATTTCGCCAGCCGACCGACACGCTGGCACCGCAATCCGCCTGGCTTCGGCTCCCCATACAGGCCCGTAACGTACAGGAGCCCCAATTGTAAGCCCCATTGCCTTCGGCCATAGTGggga                                                                                                               >  2:224590/1‑239 (MQ=255)

                                                                                                                                  ggCGTTAACGGTGTAACCCAG‑CGGCCCGA‑TATCATCGCTGTAA‑CTGATGCCGCCG‑ACAACATCCACCACGTTGAAGCCCATCGGCGTGGTAC‑CGATATCCCAGCTCCAGACGTCCTTTCACCAGCCGACCGCACAGCCAGCACCGGAATCCAAATGGAGGCGGTTGCAGCTAACGACCCGTAATTGCAAGGTGCCACCGCTGCCGACCCAATTGCACACGGCGTTAGAGGAGAAAATGc                                                                                                         >  2:335311/1‑239 (MQ=255)

                                                                                                                                      ttAACGGTGTAACCCGG‑CGGCCCGA‑TATCATCGCTGTAA‑CTGAGGCCGCCG‑ATCACATCCACCACGTTGAAGCCCATCGGCGTGGTAC‑CGATATCCCGGCTCCAGACGTCATTTCGCCAGCCGACCGCCACGCTGGCACCGGAATCCGACTGGCTGCGGTTGCCGCTACAGTCCTGTAATGTACAGGTGCCCCAGTTGTCATCCCATTTGCCATCGGCATTAGTGGAGAAACTGCCGa                                                                                                      <  1:572466/238‑1 (MQ=255)

                                                                                                                                          cGGTGTAACCCAG‑CGGCCCGA‑TATCATCGCTGTAA‑CTGATGCCGCCG‑ACCACATCCACCACGTTGAAGCCCATCGGCGTGGTAC‑CGATATCCCAGCTCCAGACGTCATTTCGCCAGCCGACCGCCACGCTGGCACCGGAATCCGACTGGCTGCGGTTGCCGCTACAGTCCTGTAATGTACAGGTGCCCCAGTTGTCATCCCATTTGCCATCGGCATTAGTGGGGAAACTGCCGACGTTc                                                                                                 >  1:162747/1‑239 (MQ=255)

                                                                                                                                            gtgtAACCCAG‑CGGCCCGA‑TATCATCGCTGTAA‑CTGATGCCGCCG‑ACCACATCCACCACGTTGAAGCCCATCGGCGTGGTAC‑CGATATCCCAGCTCCAGACGTCATTTCGCCAGCCGACCGCCACGCTGGCACCGGAATCCGACTGGCTGCGGTTGCCGCTACAGTCCTGTAATGTACAGGTGCCCCAGTTGTCATCCCATTTGCCATc                                                                                                                             <  1:194907/209‑1 (MQ=255)

                                                                                                                                            gtgtAACCCAG‑CGGCCCGA‑TATCATCGCTGTAA‑CTGATGCCGCCG‑ACCACATCCACCACGTTGAAGCCCATCGGCGTGGTAC‑CGATATCCCAGCTCCAGACGTCATTTCGCCAGCCGACCGCCACGCTGGCACCGGAATCCGACTGGCTGCGGTTGCCGCTACAGTCCTGTAATGTACAGGTGCCCCAGTTGTCATCCCATTTGCCATc                                                                                                                             >  2:194907/1‑209 (MQ=255)

                                                                                                                                             tgtACCCCAG‑CGGCCCGA‑TATCATCGCTGTAA‑CTGATGCCGCCG‑ACCACATCCACCCCGTTGAAGCCCATCGGCGTGGTAC‑CGATATCCCAGCTCCAGACGTCATTTCGCCAGCCGACCGCCACGCTGGCACCGGAATCCGACTGGCTGCGGTTGCCGCTACAGTCCTGTAATGTACAGGTGCCCCAGTTGTCATCCCATTTGcc                                                                                                                                <  1:212172/205‑1 (MQ=255)

                                                                                                                                              gtAACCCAG‑CGGCCCGA‑TATCATCGCTGTAA‑CTGATGCCGCCG‑ACCACATCCACCACGTTGAAGCCCATCGGCGTGGTAC‑CGATATCCCAGCTCCAGACGTCATTTCGCCAGCCGACCGCCACGCTGGCACCGGAATCCGACTGGCTGCGGTTGCCGCTACAGTCCTGTAATGTACAGGTGCCCCAGTTGTCATCCCCTTTGCCATCGCCCTTAGTGGAGAAACTGCCGCCGTTCatat                                                                                             >  1:687020/1‑239 (MQ=255)

                                                                                                                                                      g‑CGGCCCGA‑TATCATCGCTGTAA‑CTGATGCCGCCG‑ACCACATCCACCACGTTGAAGCCCATCGGCGTGGTAC‑CGATATCCCAGCTCCAGACGTCATTTCGCCAGCCGACCGCCACGCTGGCACCGGAATCCGACTGGCTGCGGTTGCCGCTACAGTCCTGGAATGTACAGGTGCCCCAGTTGTCATCCCATTTGCCATCGGCATTTGTGGAGAAAATGCCGGAGTACATATTTTCGaaa                                                                                     >  2:919551/1‑239 (MQ=255)

                                                                                                                                                        cGGCCCGA‑TATCATCGCTGTAA‑CTGATGCCGCCG‑ACCACATCCACCACGTTGACGCCCATCGGCGTGGTAC‑CGATATCCCAGCTCCAGACGTCATTTCGCCAGCCGACCGCCACGCTGTCACCGGAATCCGACTGCCTGCGGTTGCCGCTTAAGTCCTGTACTGGACAGGGCCCCCACGTGTCATCCCCTTTGCAATCGGCATTAGGGGAGAAAATTCCGCAGTTCATAtttcagaaat                                                                                    >  2:46077/1‑231 (MQ=255)

                                                                                                                                                        cGGCCCGA‑TATCATCGCTGTAA‑CTGATGCCGCCG‑ACCACATCCACCACGTTGAAGCCCATCGGCGTGGTAC‑CGATATCCCAGCTCCAGACGTCATTTCGCCAGCCGACCGCCACGCTGGCACCGGAATCCGACTGGCTGCGGTTGCCGCTACAGTCCTGTAATGTACAGGTGCCCCa                                                                                                                                                  >  1:974060/1‑177 (MQ=255)

                                                                                                                                                        cGGCCCGA‑TATCATCGCTGTAA‑CTGATGCCGCCG‑ACCACATCCACCACGTTGAAGCCCATCGGCGTGGTAC‑CGATATCCCAGCTCCAGACGTCATTTCGCCAGCCGACCGCCACGCTGGCAACGGAATCCGACTGGCCGCGGTTGGCGCTACAGTCCTCTAATGTACAGGTGCCCCCGGTGTCATCCCACTTGCCATCGGCATTa                                                                                                                      >  2:212172/1‑205 (MQ=255)

                                                                                                                                                        cGGCCCGA‑TATCATCGCTGTAA‑CTGATGCCGCCG‑ACCACATCCACCACGTTGAAGCCCATCGGCGTGGTAC‑CGATATCCCAGCTCCAGACGTCATTTCGCCAGCCGACCGCCACCCTGGCACCGGAATCCGACTGGCTGCGGTTGCCGCTACAGTCCTGTAAATTACAGGTGCCCACGTTGTCATCCCATTTGCCATCGGCATTAGTGGAGAAAATTCCGACGTTCATCATGAAGAAAt                                                                                    >  2:780832/1‑239 (MQ=255)

                                                                                                                                                        aggCCCGA‑TATCATCGCTGTAA‑CTGATGCCGCCG‑ACCACATCCACCACGTTGAAGCCCATCGGCGTGGTAC‑CGATATCCCAGCTCCAGACGTCATTTCGCCAGCCGACCGCCACGCTGGCACCGGAATCCGCCCGGCTGCGGTTTCCGCTACCGCCCTGTAATTTTCCGGGGCCCCCGTTGTCATCCCATTTGCCCACGGCATTCGGGGAGAAAACGCCCCCGTTTAAATTCACCaaa                                                                                     >  2:792806/2‑238 (MQ=255)

                                                                                                                                                                      tcGCTGTAA‑CTGATGCCGCCG‑ACCACATCCACCACGTTGAAGCCCATCGGCGTGGTAC‑CGATATCCCAGCTCCAGACGTCATTTCGCCAGCCGACCGCCACGCTGGCACCGGAATCCGACTGGCTGCGGTTGCCGCTACAGTCCTGTAATGTACAGGTGCCCCAGTTGTCATCCCATTTGCCATCGGCATTAGTGGAGAAACTGCCGACGTTCATATTGACGAAATCACTGCGAAAGaa                                                                       >  1:880210/1‑239 (MQ=255)

                                                                                                                                                                             aa‑CTGATGCCGCCG‑ACCACATCCACCACGTTGAAGCCCATCGGCGTGGTAC‑CGATATCCCAGCTCCAGACGTCATTTCGCCAGCCGACCGCCACGCTGGCACCGGAATCCGACTGGCTGCGGTTGCCGCTACAGTCCTGTAATGTACAGGTGCCCCAGTTGTCATCCCATTTGCCATCGGCATTAGTGGAGAAACTGCCGACGTTCATATTGACGAAATCACTGCGAAAGAACATCCg                                                                 <  1:46077/238‑1 (MQ=255)

                                                                                                                                                                              a‑CTGATGCCCCCG‑ACCACATCCCCCACGTTGAAGCCCATCGGCGTGGTAC‑CGATACCCCAGCTCCAGACGTCATTTCGCCAGCCGACCGCCACGCTGGCACCGGAATCCGACTGGCTGCGGTTGCCGCTACAGTCCTGTAATGTACAGGTGCCCCAGTTGTCATCCCATTTGCCATCGGCATTAGTGGAGAAACTGCCGACGTTCATATTGACGAAATCACTGCGAAAGAACATCCGcc                                                               <  1:229634/239‑1 (MQ=255)

                                                                                                                                                                                  gATCCCGCCC‑ACCACATCCACCACGTTGAAGCCCATCGGCGTGGTAC‑CGATACCCCAGCTCCAGACGTACTTTCGCCAGCCGACCGCCACGCTGGCACCGGAATCCGACTGGCTGCGGTTGCCGCTACAGTCCTGTAATGTACAGGTGCCCCAGTTGTCATCCCATTTGCCATCGGCATTAGTGGAGAAACTGCCGACGTTCATATTGACGAAATCACTGCGAAAGAACATCCGCCCGt                                                            <  1:478485/239‑1 (MQ=255)

                                                                                                                                                                                        gccg‑ACCACATCCACCACGTTGAAGCCCATCGGCGTGGTAC‑CGATATCCCAGCTCCAGACGTCATTTCGCCAGCCGACCGCCACGCTGGCACCGGAATCCGACTGGCTGCGGTTGCCGCTACAGTCCTGTAATGTACAGGTGCCCCAGTTGTCATCCCCTTTGCCATCGGCATTAGTGGAGAAACTCCCGCCGTTCAAATTTCCGAAATCACCGCAAAAGAAAATCCCCCCGTCaaaaa                                                      >  2:1194138/1‑238 (MQ=255)

                                                                                                                                                                                          cg‑ACCACATCCCCCACGTTGAAGCCCCTCGGCGTGGTAC‑CGATATCCCAGCTCCAGACGTCATTTCGCCAGCCGACCGCCACGCTGGCACCGGAATCCGACTGGCTGCGGTTGCCGCTACAGTCCTGTAATGTACAGGTGCCCCAGTTGTCATCCCATTTGCCATCGGCATTAGTGGAGAAACTGCCGACGTTCATATTGACGAAATCACTGCGAAAGAACATCCGCCCGTCAGAATAc                                                    <  1:951794/239‑1 (MQ=255)

                                                                                                                                                                                            gcccccaTCCACCCTGTTGAAGCCCATCGGCGTGGTAC‑CGATATCCCACTTCCGGACGTCATTCCGCCAGCCGACCGCCACGCTGGCACGGGAATCCGACTGGCTGCGGTTGCCGCTACAGTCCTGTAATGTACAGGTGCCCCAGTTGTCATCCCATTTGCCATCGGCATTAGTGGAGAAACTGCCGACGTTCATATTGACGAAATCACTGCGAAAGAACATCCGCCCGTCAGAATACg                                                   <  1:1003688/234‑1 (MQ=255)

                                                                                                                                                                                                 caccccccacGTTGAAGCCCAGCGGCGTGGTAC‑CGATTCCCCAGCCCCGGACGTCATTTCGCCAGCCGCCCGCCACGCTGGCACCGGAATCCGACTGGCTGCGGTTGCCGCTACAGTCCTGTAATGTACAGGTGCCCCAGTTGTCATCCCATTTGCCATCGGCATTAGTGGAGAAACTGCCGACGTTCATATTGACGAAATCACTGCGAAAGAACATCCGCCCGTCAGAATACGGCGCa                                              <  1:1205726/233‑1 (MQ=255)

                                                                                                                                                                                                  aTCCCCCACGGTGAAGCCCATCGGCGTGGTAC‑CGATACCCCAGCTCCAGACGTCATTTCGCCAGCCGACCGCCACGCTGGCACCGGAATCCGACTGGCTGCGGTTGCCGCTACAGTCCTGTAATGTACAGGTGCCCCAGTTGTCATCCCATTTGCCATCGGCATTAGTGGAGAAACTGCCGACGTTCATATTGACGAAATCACTGCGAAAGAACATCCGCCCGTCAGAATACGGCGCAt                                             <  1:1091124/239‑1 (MQ=255)

                                                                                                                                                                                                       tccggTTTAAGCCCCTGGGGGGGGGAA‑CGATAGCCCAGCTACAAGCGTCATTCCGCCCGCCGACCGCCACGCTGGCACCGGAATCCGACTGGCTGCGGTTGCCGCTACAGTCCTGTAATGTACAGGTGCCCCAGTTGTCATCCCATTTGCCATCGGCATTAGTGGAGAAACTGCCGACGTTCATATTGACGAAATCACTGCGAAAGAACATCCGCCCGTCAGAATACGGCGCATCCAcc                                        <  1:179031/235‑1 (MQ=255)

                                                                                                                                                                                                        cacGTTGAAGCCCATCGGCGTGGTAC‑CGATATCCCAGCTCCAGACGTCATTTCGCCAGCCGACCGCCACGCTGGCACCGGAATCCGACTGGCTGCGGTTGCCGCTACAGTCCTGTAATGTACAGGTGCCCCAGTTGTCATCCCATTTGCCATCGGCATTAGTGGAGAAACTGCCGACGTTCATATTGACGAAATCACTGCGAAAGAACATCCGCCCGTCAGAATACGGCGCATCCAccc                                       >  1:18211/1‑238 (MQ=255)

                                                                                                                                                                                                         ccggtGAGGCCCATCGGCGTGGTAC‑CGATACCCCAGCTCCAGACGGCATTTCGCCAGCCGACCGCCACGCTGGCACCGGAATCCGACTGGCTGCGGTTGCCGCTACAGTCCTGTAATGTACAGGTGCCCCAGTTGTCATCCCATTTGCCATCGGCATTAGTGGAGAAACTGCCGACGTTCATATTGACGAAATCACTGCGAAAGAACATCCGCCCGTCAGAATACGGCGCATCCACCTg                                      <  1:482320/235‑1 (MQ=255)

                                                                                                                                                                                                         ccGTTGACGCCCATCGGCGTGGGAC‑CGATACCCCGGCCCCAGACGGCATTGCGCCAGACGACCGCCACGCTGGCACCGGAATCCGACTGGCTGCGGTTGCCGCTACAGTCCTGTAATGTACAGGTGCCCCAGTTGTCATCCCATTTGCCATCGGCATTAGTGGAGAAACTGCCGACGTTCATATTGACGAAATCACTGCGAAAGAACATCCGCCCGTCAGAATACGGCGCATCCACCTg                                      <  1:142293/238‑1 (MQ=255)

                                                                                                                                                                                                         ccGTTGAAGCCCGTCGGCGTGGTAC‑CGATACCCCAGCTCCAGACGTCATTTCGCCAGCCGACCGCCACGCTGGCACCGGAATCCGACTGGCTGCGGTTGCCGCTACAGTCCTGTAATGTACAGGTGCCCCAGTTGTCATCCCATTTGCCATCGGCATTAGTGGAGAAACTGCCGACGTTCATATTGACGAAATCACTGCGAAAGAACATCCGCCCGTCAGAATACGGCGCATCCACCTg                                      <  1:1290396/238‑1 (MQ=255)

                                                                                                                                                                                                         acGTTGAAGCCCAGCGGCGTGGTCC‑CGATATCCCAGCTCCAGACGTCATTTCGCCAGCCGACCGCCACGCTGGCACCGGAATCCGACTGGCTGCGGTTGCCGCTACAGTCCTGTAATGTACAGGTGCCCCAGTTGTCATCCCATTTGCCATCGGCATTAGTGGAGAAACTGCCGACGTTCATATTGACGAAATCACTGCGAAAGAACATCCGCCCGTCAGAATACGGCGCATCCACCTg                                      <  1:1194138/239‑1 (MQ=255)

                                                                                                                                                                                                          cGTTGAAGCCCATCGGCGTGGTAC‑CGATATCCCAGCTCCAGACGTCATTTCGCCAGCCGACCGCCACGCTGGCACCGGAATCCGACTGGCTGCGGTTGCCGCTACAGTCCTGTAATGTACAGGTGCCCCAGTTGTCATCCCATTTGCCATCGGCATTAGTGGAGAAACTGCCGACGTTCATATTTACGAAATCACTGCGCAAGAACATCCGCCCGTCAGAATACGTCGCATCCACCTGc                                     >  1:213695/1‑239 (MQ=255)

                                                                                                                                                                                                           gTTGAAGCCCATCGGCGTGGTAC‑CGATATCCCAGCTCCAGACGTCATTTCGCCAGCCGACCGCCACGCTGGCACCGGAATCCGACTGGCTGCGGTTGCCGCTACAGTCCTGTAATGTACAGGTGCCCCAGTTGTCATCCCATTTGCCATCGGCATTAGTGGAGAAACTGCCGACGTTCATATTGACGAAATCACTGCGAAAGAACATCCGCCCGTCAGAATACGGCGCATCCACCTGCa                                    <  1:913939/239‑1 (MQ=255)

                                                                                                                                                                                                            ttGAAGCCCATCGGCGTGGTAC‑CGATATCCCAGCTCCAGACGTCATTTCGCCAGCCGACCGCCACGCTGGCACCGGAATCCGACTGGCTGCGGTTGCCGCTACAGTCCTGTAATGTACAGGTGCCCCAGTTGTCATCCCATTTGCCATCGGCATTAGTGGAGAAACTGCCGACGTTCATATTGACGAAATCACTGCGACAGAACATCCGCCCGTCAGAATAAGGCGCATCCACCTGCaa                                   >  1:233574/1‑239 (MQ=255)

                                                                                                                                                                                                                    cATCGGCGTGGTAC‑CGATATCCCAGCTCCAGACGTCATTTCGCCAGCCGACCGCCACGCTGGCACCGGAATCCGACTGGCTGCGGTTGCCGCTACAGTCCTGTAATGTACAGGTGCCCCAGTTGTCATCCCAt                                                                                                                                     >  1:1212682/1‑133 (MQ=255)

                                                                                                                                                                                                                    cATCGGCGTGGTAC‑CGAAATCCCAGCTCCAGCCGTCATTTCGCCAGCCCGCCGCCACGCTGGCACCGGAATCCGACTGGCTGCGGTTGCCGCTACAGTCCTGTAATGTACAGGTGCCCCAGTTGTCATCCCATTTGCCATCGGCATTAGTGGAGAAACTGCCGACGTTCATATTGACGAAATCACTGCGAAAGAACATCCGCCCGTCAGAATACGGCGCATCCACCTGCAACATGGTAg                           <  1:1304425/239‑1 (MQ=255)

                                                                                                                                                                                                                      tCGGCGTGGTAC‑CGATATCCCAGCTCCAGACGTCATTTCGCCAGCCGACCGCCACGCTGGCACCGGAATCCGACTGGCTGCGGTTGCCGCTACAGTCCTGTAATGTACAGGTGCCCCAGTTGTCATCCCATTTGCCATCGGCATTAGTGGAGAAACTGCCGACGTTCATATTGACGAAATCACTGCGAAAGAACATCCGCCCGCCAGAATACGGCGCATCCACCTGCAACATGGTAatg                         >  1:926980/1‑239 (MQ=255)

                                                                                                                                                                                                                        ggCGTGTTAC‑CGAAACCCCAGCTCCAGCAGTCATTTCGCCAGCCGCCCGCCACGCTGGCACCGGAATCCGACTGGCTGCGGTTGCCGCTACAGTCCTGTAATGTACAGGTGCCCCAGTTGTCATCCCATTTGCCATCGGCATTAGTGGAGAAACTGCCGACGTTCATATTGACGAAATCACTGCGAAAGAACATCCGCCCGTCAGAATACGGCGCATCCACCTGCAACATGGTAGtgtg                       <  1:792806/239‑1 (MQ=255)

                                                                                                                                                                                                                            tGGTAC‑CGATATCCCAGCTCCAGACGTCATTTCGCCAGCCGACCGCCACGCTGGCACCGGAATCCGACTGGCTGCGGTTGCCGCTACAGTCCTGTAATGTACAGGTGCCCCAGTTGTCATCCCATTTGCCATCGGCATTAGTGGAGAACCTGCCGACGTTCATATTGACGAAATCACTGCGAAAGAACATCCGCCCGCAGGAAAACGCGGCATCAACCTGCAACATGGTAGTGTGCGCt                   >  1:311805/1‑239 (MQ=255)

                                                                                                                                                                                                                               tcc‑cGATATCCCAGCTCCAAGCGTCATTGCGCCAGCCGACCGCCACGCTGGCACCGGAATCCGACTGGCTGCGGTTGCCGCTACAGTCCTGTAATGTACAGGTGCCCCAGTTGTCATCCCATTTGCCATCGGCATTAGTGGAGAAACTGCCGACGTTCATATTGACGAAATCACTGCGAAAGAACATCCGCCCGTCAGAATACGGCGCATCCACCTGCAACATGGTAGTGTGCGCttt                 <  1:780832/236‑1 (MQ=255)

                                                                                                                                                                                                                               tAC‑CGATACCCCAGCCCCAGCCGTCATTGCGCCAGCCGACCGCCACGCTGGCACCGGAATCCGACTGGCTGCGGTTGCCGCTACAGTCCTGTAATGTACAGGTGCCCCAGTTGTCATCCCATTTGCCATCGGCATTAGTGGAGAAACTGCCGACGTTCATATTGACGAAATCACTGCGAAAGAACATCCGCCCGTCAGAATACGGCGCATCCACCGGCAACATGGTAGTGTGCGCttt                 <  1:1046313/238‑1 (MQ=255)

                                                                                                                                                                                                                                   cGATATCCACGCCCCAGGCGTCATTTCGCCAGCCGACCGACACGCTGGCACCGGAATCCGACTGGCTGCGGTTGCCGCTACAGTCCTGTAATGTACAGGTGCCCCAGTTGTCATCCCATTTGCCATCGGCATTAGTGGAGAAACTGCCGACGTTCATATTGACGAAATCACTGCGAAAGAACATCCGCCCGTCAGAATACGGCGCATCCACCTGCAACATGGTAGTGTGCGCTTTCAGa             <  1:917407/239‑1 (MQ=255)

                                                                                                                                                                                                                                          ccAGCTCCAGACGTCCTTTCGCCAGCCGACCGCCACGCTGGCACCGGAATCCGACTGGCTGCGGTTGCCGCTACAGTCCTGTAATGTACAGGTGCCCCAGTTGTCATCCCATTTGCCATCGGCATTAGTGGAGAAACTGCCTACGTTCATATTGACCAAATCACTTCGAAAGAACCTCCCGCCGTCCGAATAAGGCGCCCCCACCTGCAACACGGCAGTGTGCGCTTTCAGATCGGAGt      >  2:278708/1‑239 (MQ=255)

                                                                                                                                                                                                                                            aGCTCCAGACGTCATTTCGCCAGCCGACCGCCACGCTGGCACCGGAATCCGACTGGCTGCGGTTGCCGCTACAGTCCTGTAATGTACAGGTGCCCCAGTTGTCATCCCATTTGCCATCGGCATTAGTGGAGAAACTGCCGACGTTCATATTGACGAAATCACTGCGAAAGAACATCCGCCCGTCAGAATACGGCGCATCCCCCTGCAACATGGCAGTGTGCGCTTTCAGATCGGAGTac    >  1:397465/1‑238 (MQ=255)

                                                                                                                                                                                                                                            aGCTCCAGACGTCATTTCGCCAGCCGACCGCCACGCTGGCACCGGAATCCGACTGGCTGCGGTTGCCGCTACAGTCCTGTAATGTACAGGTGCCCCAGTTGTCATCCCATTTGCCATCGGCATTAGTGGAGAAACTGCCGACGTTCATATTGACGAAATCACTGCGAAAGAACATCCGCCCGCCCGAATACGGCGCATCCACCTGCAACATGGTAGTGTGCGCTTTCAGATCGGAGTa     >  1:132630/1‑238 (MQ=255)

                                                                                                                                                                                                                                              cTCCAGACGTCATTTCGCCAGCCGACCGCCACGCTGGCACCGGAATCCGACTGGCTGCGGTTGCCGCTACAGTCCTGTAATGTACAGGTGCCCCAGTTGTCATCCCATTTGCCATCGGCATTATAGGAGAAACTGCCGCCGTTCATATTGACGAAATCCCTGCGGAAGAACATCCGCCCGTCACAATACGGCGCATCCCCCTGCCACATGGCAGTGGGCGCTTTCCAATCGGCGTacc   >  2:896198/1‑236 (MQ=255)

                                                                                                                                                                                                                                               tCCAGACGTCATTTCGCCAGCCGACCGCCACGCTGGCACCGGAATCCGACTGGCTGCGGTTGCCGCTACAGTCCTGTAATGTACAGGTGCCCCAGTTGTCATCCCATTTGCCATCGGCATTAGTGGAGAAACTGCCGACGTTCATATTGACGAAATCACTGCGAAAGAACATCCGCCCGTCAGAAAACGGGGCATCCACCTGCAACATGGTAGTGTGCGCTTTCAGATCGGCGTAacc  >  1:616303/1‑238 (MQ=255)

CTTTATCGTAGCTCAGACTTAGCCCCACACCGTCGGCACGTACGCCACCCCATTTTTTCCCGGTATTGCTCGGGGAGTCTTTTTGCCCACCAAAGGCCAGCAAAGAACTGGAGAT‑G‑GGCCG‑ACGGTGGGCGTTAACGGTGTAACCCAG‑CGGCCCGA‑TATCATCGCTGTAA‑CTGATGCCGCCG‑ACCACATCCACCACGTTGAAGCCCATCGGCGTGGTAC‑CGATATCCCAGCTCCAGACGTCATTTCGCCAGCCGACCGCCACGCTGGCACCGGAATCCGACTGGCTGCGGTTGCCGCTACAGTCCTGTAATGTACAGGTGCCCCAGTTGTCATCCCATTTGCCATCGGCATTAGTGGAGAAACTGCCGACGTTCATATTGACGAAATCACTGCGAAAGAACATCCGCCCGTCAGAATACGGCGCATCCACCTGCAACATGGTAGTGTGCGCTTTCAGATCGGAGTAACC  >  NC_000913/3686308‑3686776

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 12 ≤` `ATCG/ATCG` `< 13 ≤` `ATCG/ATCG` `< 25 ≤` `ATCG/ATCG` `< 39 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`