| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 4,086,203 | A→G | 11.4% | E63G (GAG→GGG) | fdhD → | formate dehydrogenase formation protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 4,086,203 | 0 | A | G | 11.4% | 275.0 / 2.3 | 112 | E63G (GAG→GGG) | fdhD | formate dehydrogenase formation protein |
| Reads supporting (aligned to +/- strand): ref base A (44/47); new base G (10/4); total (61/51) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.52e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.88e-01 | |||||||||||
Only 100 of 114 total aligned reads displayed.
TAACAGAATACCATAATGTTGGTGTGTGTGTTCTTATCTGGTTAAGAGAAAGTGAAAAAAACACAGCGAAAAGAAATCGAAAATGTG‑ACAAATATCACAGGTGTTCGTCAAATTGAGTTATGGCGGCGTGATGATTTACAACACCCACGGTTAGATGAGGTCGCGGAAGAAGTTCCCGTTGCGCTGGTCTACAACGGCATTTCGCAT‑GTGGTGATGATGGCGTCGCCCAAAGA‑CCTTGAGTAC‑TTTGCG‑CTCGGTTTTT‑CGCTTTCCGAGGGGATTATCGAAAGTCCGCGCGATATCTTCGGCATGGATGTCGTTCCTTCCTG‑TAATGGTCTTGAAGTACAAATTGAGCTTTCCAGCCGCCGCTTTATGGGGTTGAAGGAGCGCCGCCGGGCGCTGGCGGGACGTACGGGCTGTGGCGTATGCGGCGTGGAGCAACTTAATGACATCGGAAAACCGGTGCAGCCGCTACCGTTC > NC_000913/4085965‑4086438 | aGAATACCATAATGTTGGTGTGTGTGTTCTTATCTGGTTAAGAGAAAGTGAAAAAAACACAGCGAAAAGAAATCGAAAATGTG‑ACAAATATCACAGGTGTTCGTCAAATTGAGTTATGACGGCGGGATGATTTATAACACCCACGGTTAGATGAGGTGTCGGCAGAAGTTCCCTTTGCGATGGTCTACAACGGCATTTCGCAT‑GTGGGGGAGGTGGCGGCGCCCAAAAA‑GCTCGAggag > 2:1063634/1‑236 (MQ=255) aaTACCATAATGTTGGTGTGTGTGTTCTTATCTGGTTAAGAGAAAGTGAAAAAAACACAGCGAAAAGAAATCGAAAATGTG‑ACAAATATCACAGGTGTTCGTCAAATTGAGTTATGGCGGCGTGATGATTTACAACACCCACGGTTAGATGAGGTCGCGGAAGAAGTTCCCGTTGCGCTGGTCTACAACGGCATTTCGCAT‑GTGGTGATGATGGCGTCGCCCAAAGG‑CCTTGAGTCC‑tt > 1:391360/1‑239 (MQ=255) tACCATAATGTTGGTGTGTGTGTTCTTATCTGGTTAAGAGAAAGTGAAAAAAACACAGCGAAAAGAAATCGAAAATGTG‑ACAAATATCACAGGTGTTCGTCAAATTGAGTTATGGCGGCGTGATGATTTACAACACCCACGGGTAGATTGAGTCTCGGAAGAAATTCCCGTTGCGCTGGGTCACAACGGGATTTCGCCA‑GTGGTGTTGATGGTGGCGCCCAAAAA‑CCTTGAGGAC‑ttt > 1:1327046/1‑238 (MQ=255) aTAATGTTGGTGGGGGTGTTCTTATCCGGTTAAGAGAAAGTGAAAAAAACACAGCGAAAAGAAAGCGAAAATGGG‑ACAAATATCACAGGTGTTCGTCAAATTGAGTTATGGCGGCGTGATGATTTACAACACCCACGGTTAGATGAGGTCGCGGAAGAAGTTCCCGTTGCGCTGGTCTACAACGGCATTTCGCAT‑GTGGTGATGATGGCGTCGCCCAAAGA‑CCTTGAGTAC‑TTTGCG‑Ct < 1:1176196/239‑1 (MQ=255) tAATGTTGGTGTGTGTGTTCTTATCTGGTTAAGAGAAAGTGAAAAAAACACAGCGAAAAGAAATCGAAAATGTG‑ACAAATATCACAGGTGTTCGTCAAATTGAGTTATGGCGGCGTGATGATTTACAACACCCACGGTTAGATGAGGTCGCGGAAGAAGTTTCCGTTGCGCTGGGCTACAACGGCATTTCGCAT‑GTGGGGATTATGGCGTGGCCCAAAGA‑CCTTGAGTAC‑TTTGCG‑CTc > 1:317986/1‑239 (MQ=255) gtgtgtgtgtTCTTATCTGGTTAAGAGAAAGTGAAAAAAACACAGCGAAAAGAAATCGAAAATGTG‑ACAAATATCACAGGTGTTCGTCAAATTGAGTTATGGCGGCGTGATGATTTACAACACCCACGGTTAGTTGAGGTCGCGGAAGAAGTTCCCGTTGCGCTGGGCTACAACGGCATTTCGCAT‑GTGGGGATGATGGCGTCGCCCCAAGA‑CCTTGGGGACTTTTGCG‑C‑CGGtttttt > 1:222617/1‑238 (MQ=255) gtgtgtgtgtTCTTATCTGGTTAAGAGAAAGTGAAAAAAACACAGCGAAAAGAAATCGAAAATGTG‑ACAAATATCACAGGTGTTCGTCAAATTGAGTTATGGCGGCGTGATGATTTACAACACCCACGGTTAGATGGGGTCGCGGAAGAAGTTCCCGTTGCGCTGGTCTACAACGGCATTTCGCAT‑GTGGTGATGATTGCGTCGCCCAAAGA‑CCTTTGGGCC‑TTTGGG‑CTCGGttttt > 1:980007/1‑238 (MQ=255) gtgtgtgtgtTCTTATCTGGTTAAGAGAAAGTGAAAAAAACACAGCGAAAAGAAATCGAAAATGTG‑ACAAATATCACAGGTGTTCGTCAAATTGAGTTATGGCGGCGTGATGATTTACAACACCCACGGTTAGATGAGGTCGCGGAAGAAGTTCCCGTTGCGCTGGTCTACAACGGCATTTCGCAT‑GTGGTGATGATGGCGTCGCCCAAAGA‑CCTTGGGTAC‑TTTGCG‑CTCGGTTTTT‑c > 1:964859/1‑239 (MQ=255) tgtgtTCTTATCTGGTTAAGAGAAAGTGAAAAAAACACAGCGAAAAGAAATCGAAAATGTG‑ACAAATATCACAGGTGTTCGTCAAATTGAGTTATGGCGGCGTGATGATTTACAACACCCACGGTTAGATGAGGTGCCGGAAGAAGTTCCCGTTGCGCTGGTCTACAACGGCATTTTGCAT‑GTGGTGATGAATGCGTCGCCCAAAGG‑CCTTGAGTAC‑TTTTGG‑ATCGGTTTTT‑CGGtt > 1:1022994/1‑238 (MQ=255) tgtgtTCTTATCTGGTTAAGAGAAAGTGAAAAAAACACAGCGAAAAGAAATCGAAAATGTG‑ACAAATATCACAGGTGTTCGTCAAATTGAGTTATGGCGGCGTGATGATTTACAACACCCACGGTTAGATGAGGTCGCGGAAGAAGTTCCCGTTTCGCTGGGCTCCAACGGCATTTCGCCT‑GTGGGGAATATGGGGTCGCCCCAAGA‑CCTTGTGTCC‑TTTTGC‑CTCGGTTTTT‑TGCtt > 1:629458/1‑238 (MQ=255) tgtgtTCTTATCTGGTTAAGAGAAAGTGAAAAAAACACAGCGAAAAGAAATCGAAAATGTG‑ACAAATATCACAGGTGTTCGTCAAATTGAGTTATGGCGGCGTGATGATTTACAACACCCACGGTTAGATGAGGTCGCGGAAGAAGTTCCCGTTGCGCTGGTCTACAACGGCATTTCGCCT‑GTGGGGATGATGGCGTCGCCCAAAGA‑CCTTGGGTAC‑TTTGCG‑CTCCGTTTTT‑TGCtt > 1:1267943/1‑238 (MQ=255) tgtgtTCTTATCTGGTTAAGAGAAAGTGAAAAAAACACAGCGAAAAGAAATCGAAAATGTG‑ACAAATATCACAGGTGTTCGTCAAATTGAGTTATGGCGGCGTGATGATTTACAACACCCACGGTTAGATGAGGTCGCGGAAGAAGTTCCCGTTGCGCTGGTCTACAACGGCATTTCGCAT‑GTGGGGATGAGGGCGTCGCCCAAAAA‑CCTTTCGGAC‑TTTTCG‑CTCGGTTTTT‑TGCtt > 1:789036/1‑238 (MQ=255) tgtgtTCTTATCTGGTTAAGAGAAAGTGAAAAAAACACAGCGAAAAGAAATCGAAAATGTG‑ACAAATATCACAGGTGTTCGTCAAATTGAGTTATGGCGGCGTGATGATTTACAACACCCACGGTTAGATGAGGTCGCGGAAGAAGTTCCCGTTGCGCTGGTCTACAAAGGCATTTCGCAT‑GTGGTGATGGTGGCGTCGCCCAAAAC‑CCTTGGGGAC‑CTTGGG‑CTCGGttttttcttt > 1:944044/1‑233 (MQ=255) tgtgtTCTTATCTGGTTAAGAGAAAGTGAAAAAAACACAGCGAAAAGAAATCGAAAATGTG‑ACAAATATCACAGGTGTTCGTCAAATTGAGTTATGGCGGCGGGATGATTTACAACACCCACGGTTAGATGAGGTCGCGGAAGAAGTTCCCGTTGCGCTGGCCTACAACGGAATTTCGCGT‑GTGGGGAGGATGGCGGCGCCCAAAGA‑CCTTGAGTCC‑TTTTCG‑CTCGGGTTTT‑CGcgt > 1:429525/1‑236 (MQ=255) tgtTCTTATCTGGTTAAGAGAAAGTGAAAAAAACACAGCGAAAAGAAATCGAAAATGTG‑ACAAATATCACAGGTGTTCGTCAAATTGAGTTATGGCGGCGTGATGATTTACAACACCCACGGTTAGATGAGGTCGCGGAAGAAGTTCCCGTTGCGCTGGTCTACAACGGCATTTCGCAT‑GTGGTGATGATGGCGGCGCCCAAAGA‑CCTTGAGTCC‑TTTGCG‑CTCGGTTTTT‑CGCttttc > 1:1312126/1‑237 (MQ=255) tttttttttGGTTAAGAAAAAGTGAAAAAAACCCAGGGAAAAAAAATCGAAAAGTTG‑AAAAATATCACAGGTGTTCGTCAAATTGAGTTATGGCGGCGTGATGATTTACAACACCCACGGTTAGATGAGGTCGCGGAAGAAGTTCCCGTTGCGCTGGTCTACAACGGCATTTCGCAT‑GTGGTGATGATGGCGTCGCCCAAAGA‑CCTTGAGTAC‑TTTGCG‑CTCGGTTTTT‑CGCTTTCCGa < 2:728566/231‑1 (MQ=255) tttttATTTTGTTAAGAAGAAGGGAAAAAAGCACAGCGAAAAGAAATCGAAAAGGGG‑ACAAATATCACAGGTGTTCGTCAAATTGAGTTATGGCGTCGTGATGATTTACAACGCCCACGGTTAGATGGGGTCGCGGAAGAAGTTCCCGTTGCGCTGGTCTTCAACGGCATTTCGCAT‑GTGGTGATGATGGCGTCGCCCAAAGA‑CCTTGAGTAC‑TTTGCG‑CTCGGTTTTT‑CGCTTTCCGa < 2:113455/236‑1 (MQ=255) tATCTGGTTAAGAGAAAGTGAAAAAAACACAGCGAAAAGAAATCGAAAATGTG‑ACAAATATCACAGGTGTTCGTCAAATTGAGTTATGGCGGCGTGATGATTTACAACACCCACGGTTAGATGAGGTCGCGGAAGAAGTTCCCGTTGCGCTGGTCTACAACGGCATTTCGCAT‑GTGGGGATGATGGGGTCGCCCCAAGA‑CCTTGGGTAC‑TTTGCG‑CTCGGTTTTT‑CGCTTTCCGAgggg > 1:39334/1‑239 (MQ=255) tCTGGTTAAAAAAAAGGTAAAAAAACACAGCAAAAAGAAATCGGAAATGGG‑ACAAATATCACAGGTTTTCGTCAAATTGAGTTATGGCGGCGTGATGATTTACAACACCCACGGTTAGATGAGGTCGCGGAAGAAGTTCCCGTTGCGCTGGTCTACAACGGCATTTCGCAT‑GTGGTGATGATGGCGTCGCCCAAAGA‑CCTTGAGTAC‑TTTGCG‑CTCGGTTTTT‑CGCTTTCCGAGGGGAt < 2:272238/239‑1 (MQ=255) gTTAAGAGAAAGTGAAAAAAACACAGCGAAAAGAAATCGAAAATGTG‑ACAAATATCACAGGTGTTCGTCAAATTGAGTTATGGCGGCGTGATGATTTTCAACACCCCCGGTTAGATGAGGTCGCGGAAGGAGTTCCCGTTGCGCTGGTCTACACAGGCATTTCGCAT‑GTGGTGAAGATGGCGTCGCCCAAAGACCCTTGGGAAC‑TTTG‑G‑CCCGGGTTTT‑TGCTTTCCCCGGGGGATATc > 2:309117/1‑239 (MQ=255) gTTAAGAGAAAGTGAAAAAAACACAGCGAAAAGAAATCGAAAATGTG‑ACAAATATCACAGGTGTTCGTCAAATTGAGTTATGGCGGCGTGATGATTTACAACACCCACGGTTAGATGAGGTCGCGGAAGAAGTTCCCGTTGCCCTGGGCTCAAACGGCATTTTGCCTGGTGGGGTTG‑TGGGGGCGCCCCAAAA‑CACCGAGTCC‑TTTTCG‑CCCGGGTTTT‑TGTTTTCCGCGGGGGttcac > 2:1043094/1‑236 (MQ=255) gTTAAGAGAAAGTGAAAAAAACACAGCGAAAAGAAATCGAAAATGTG‑ACAAATATCACAGGTGTTCGTCAAATTGAGTTATGGCGGCGGGATGATTTACAACACCCACGGTTAGATGAGGTCGCGGAAGAAGTTCCCGTTGCGCTGGTCTACAACGGCATTTCGCAT‑TTGGTGATGATGGCGTCGCCCAAAGA‑CCTTTGGTAC‑TTTGCG‑CTCGGTTTTT‑CGCTTTCCGAGGGGGTTAt > 1:272238/1‑238 (MQ=255) gTTAAGAGAAAGTGAAAAAAACACAGCGAAAAGAAATCGAAAATGTG‑ACAAATATCACAGGTGTTAGTCAAATTGAGTTATGGCGGAGAGATGAGTTAAAAAAACCAAGGTTAGATGAGGTCGCGGAAGAAGATTCCGTTGCGGAGGTCTACAACGGCATTTTGCAT‑GTGGGGATGATGGCGGCGGCCAAAGA‑CCTTGAGTAA‑TTTGCG‑GTCGGTTTTT‑AGCTTTGCGAGGGGATTaag > 1:953517/1‑237 (MQ=255) agaAAGTGAAAAAAACACAGCGAAAAGAAATCGAAAATGTG‑ACAAATATCACAGGTGTTCGTCAAATTGAGTTATGGCGGCGTGAGGATTTACAACACCCACGGTTAGATGAGGTCGCGGAAGAAGTTCCCGTTGCGCTGGTCTACAACGGCATTTCGCAT‑TGTGTGATGGAGGGGTCGCCCCAAGA‑CACT‑CGGAC‑TATTCGCCCCGGTTTTT‑CGCTTTTCGCGGGGagtctaccaaaa > 2:52907/1‑228 (MQ=255) aGTGAAAAAAACACAGCGAAAAGAAATCGAAAATGTG‑ACAAATATCACAGGTGTTCGTCAAATTGAGTTATGGCGGCGTGAAGATTTACAAAAACCACGGGTAGATTGGGTCGCGGAAGCAGGTCCCGTTGCGCTCGGCTACACCGGCATTTCGCGT‑GGGGGGAGGGTGGCGCGGCCCAAAAC‑CCCTTGGGAC‑TTTCGG‑CCCGGTTTTTCCGCTTCCCAGGGGGTTTATCGAAAgcagg > 2:1257192/1‑235 (MQ=255) attaaaaaaaCACAGCGAAAAGAAATGGAAAATGTG‑AAAAATATCACAGGTGTTCGTCAAATTGAGTTATGGCGGCGTGATGATTTACAACACCCACGGTTAGATGAGGTCGCGGAAGAAGTTCCCGTTGCGCTGGTCTACAACGGCATTTCGCAT‑GTGGTGATGATGGCGTCGCCCAAAGA‑CCTTGAGTAC‑TTTGCG‑CTCGGTTTTT‑CGCTTTCCGAGGGGATTATCGAAAGTCcgcg < 2:818205/236‑1 (MQ=255) gAAAAAAACCCAGCGAAAAAAAATGGAAAA‑GTGTACAAATCTCCCAGGGTTGCGTCAAATTGGGTTAGGGCGGCTGTATTATTTACAACACCCACGGTTAGATGAGGTCGCGGAAGAAGTTCCCGTTGCGCTGGTCTACAACGGCATTTCGCAT‑GTGGTGATGATGGCGTCGCCCAAAGA‑CCTTGAGTAC‑TTTGCG‑CTCGGTTTTT‑CGCTTTCCGAGGGGATTATCGAAAGTCcgcg < 2:1050031/237‑1 (MQ=255) aaaaaaaCACAGCGAAAAGAAATCGAAAATGTG‑ACAAATATCACAGGTGTTCGTCAAATTGAGTTATGGCGGCGTGATGATTTACAACACCCACGGTTAGATGAGGTCGCGGAAGAAGTTCCCGTTGCGCTGGTCTACAACGGCATTTCGCAT‑GTGGTGATGATGGCGTCGCCCAAAGA‑CCTTGAGTAC‑TTTGCG‑CTCGGTTTTT‑CGCTTTCCGAGGGGATTATCGAAAGTCcgcgcg < 1:230937/238‑1 (MQ=255) aaaaaaCAACGAGAAAAGAAATCGAAACTGGG‑ACAAGTTACACAGGTGTTCGGCAAAGTGAGGTATGGGGGCGTGATGATTTACAACACCCACGGGTAGATGAGGGCGCGGAAGAAGTTCCCGTTGCGCTGGTCTACAACGGCATTTCGCAT‑GTGGTGACGATGGCGTCGCCCAAAGA‑CCTTGAGTAC‑TTTGCG‑CTCGGTTTTT‑CGCTTTCCGAGGGGATTATCGAAAGTCCGCGCGa < 2:1073549/238‑1 (MQ=255) gAAAAGGAATCGAAAATGTG‑ACAAATATCACAGGTGTTCGTCAAATTGAGTTAGGGCGGCGTTATGATTTACAACACCCACGGTTAGATGAGGTCGCGGAAGAAGTTCCCGTTGCGCTGGTCTACAACGGCATTTCGCAT‑GTGGTGATGATGGCGTCGCCCAAAGA‑CCTTGAGTAC‑TTTGCG‑CTCGGTTTTT‑CGCTTTCCGAGGGGATTATCGAAAGTCCGCGCGATATCTTCGGCAt < 1:1123772/238‑1 (MQ=255) gAAAAGAAATCGAAAATGTG‑ACAAATATCACAGGTGTTCGTCAAATTGAGTTATGGCGGCGTGATGATTTACAACACCCACGGTTAGATGAGGTCGCGGAAGAAGTTCCCGTTGCGCTGGTCTACAACGGCATTTCGCAT‑GTGGTGATGATGGCGTCGCCCAAAGA‑CCTTGAGTAC‑TTTGCG‑CTCGGTTTTT‑CGCTTTCCGAGGGGATTATCGAAAGTCCGCGCGATATCTTCGGCAt < 1:1075355/238‑1 (MQ=255) gAAAAGAAATCGAAAATGTG‑ACAAATATCACAGGTGTTCGTCAAATTGAGTTATGGCGGCGTGATGATTTACAACACCCACGGTTAGATGAGGTCGCGGAAGAAGTTCCCGTTGCGCTGGTCTACAACGGCATTTCGCAT‑GTGGTGATGATGGCGTCGCCCAAAGA‑CCTTGAGTAC‑TTTGCG‑CTCGGTTTTT‑CGCTTTCCGAGGGGATTATCGAAAGTCCGCGCGATATCTTCGGCAt < 1:1257192/238‑1 (MQ=255) aaaGAAATCGAAAATGTG‑ACAAATATCACAGGTGTTCGTCAAATTGAGTTATGGCGGCGTGATGATTTACAACACCCACGGGTAGATGAGGTCGCGGAAGAAGTTCCCGTTTCGCTGGTCTACAACGGCATTTCGCAT‑GTGGTGATGATGGCGGCGCCCAAAGA‑CCTTGAGGAC‑TTTGCG‑CTCGGTTTTT‑CGCTTTCCGAGGGGATTATCGCAAGTCCGCGCGGCATCTTCGGCATggt > 1:1036170/1‑238 (MQ=255) tCGAAAATGGT‑ACAAATATCCCAGGTGTTCGTCAAATTGAGTTATGGCGGCGTGATGATTTACAACACCCACGGTTAGATGAGGTCGCGGAAGAAGTTCCCGTTGCGCTGGTCTACAACGGCATTTCGCAT‑GTGGTGATGATGGCGTCGCCCAAAGA‑CCTTGAGTAC‑TTTGCG‑CTCGGTTTTT‑CGCTTTCCGAGGGGATTATCGAAAGTCCGCGCGATATCTTCGGCATGGATGTCGtt < 1:1043094/239‑1 (MQ=255) aaaaTGTG‑ACAAATATTACAGGTGTTTGTCAAATTGAGTTATGGCGGCGTGATGATTTACAACACCCACGGTTAGGTGAGGTCGCGGAAGAAGTTCCCGTTGCGCTGGTTTACAACGGCATTTCGCAT‑GTGGTGATGATGGCGTCGCCCAAAGA‑CCTTGAGTAC‑TTTGCG‑CTCGGTTTTT‑CGCTTTCCGAGGGGATTATCGAAAGTCCGCGCGATATCTTCGGCATGGATGTCGttcct < 1:675110/239‑1 (MQ=255) aaaTTTG‑ACAAATTTCACAGGTTTTCGTCAAATTGAGTTATGGGGGCGTGATGGTTTACAACCCCCACGGTTAGATGAGGTCGCGGAAGAAGTTCCCGTTGCGCTGGTCTACAACGGCATTTCGCAT‑GTGGTGATGATGGCGTCGCCCAAAGA‑CCTTGAGTAC‑TTTGCG‑CTCGGTTTTT‑CGCTTTCCGAGGGGATTATCGAAAGTCCGCGCGATATCTTCGGCATGGATGTCGttcct < 2:789036/238‑1 (MQ=255) aaaTGTG‑ACAAATATCACAGGTGTTCGTCAAATTGAGTTATGGCGGCGTGATGATTTACAACACCCACGGTTAGATGAGGTCGCGGAAGAAGTTCCCGTTGCGCTGGTCTACAACGGCATTTCGCAT‑GTGGTGATGATGGCGTCGCCCAAAGA‑CCTTGAGTAC‑TTTGCG‑CTCGGTTTTT‑CGCTTTCCGAGGGGATTATCGAAAGTCCGCGCGATATCTTCGGCATGGATGTCGttcct < 1:952854/238‑1 (MQ=255) aaaTGTG‑ACAAAGTCCCCAGGGTTTGGGCAAATGGAGTTATGGCGGGGTGATGATTTACAACACCCACGGTTAGATGAGGTCGGGGAAGAAGTTCCCGTTGCGCTGGTCTACAACGGCCTTTCGCAT‑GTGGTGATGATGGCGTCGCCCAAAGA‑CCTTGAGTAC‑TTTGCG‑CTCGGTTTTT‑CGCTTTCCGAGGGGATTATCGAAAGTCCGCGCGATATCTTCGGCATGGATGTCGttcct < 1:1257357/238‑1 (MQ=255) aaaTGTG‑ACAAAGATCAACGGGGTTACGCAAAGTTGGTTATGGCGGGGTGGTGATTTACACCCCCCGAGTTTAGATGAGGGCGCGGAAGAAGTTCCCGTTGCGCTGGTCTACAACGGCATTTCGCAT‑GTGGTGATGATGGCGTCGCCCAAAGA‑CCTTGAGTAC‑TTTGCG‑CTCGGTTTTT‑CGCTTTCCGAGGGGATTATCGAAAGTCCGCGCGATATCTTCGGCATGGATGTCGttcct < 2:807416/238‑1 (MQ=255) aatggcaCAAATATCACAGGTGTTCGTCAAATTGAGTTAGGGCGGCGTGATGATTTACAACCCCCACGGTTAGATGAGGTCGCGGAAGAAGTTCCCGTTGCGCTGGTCTACAACGGCATTTCGCAT‑GTGGTGATGATGGCGTCGCCCAAAGA‑CCTTGAGTAC‑TTTGCG‑CTCGGTTTTT‑CGCTTTCCGAGGGGATTATCGAAAGTCCGCGCGATATCTTCGGCATGGATGTCGttccttc < 1:270392/233‑1 (MQ=255) aCAAATTTCCCAGGGCTGCGGCAAAGTGAGTTATGGCGGTGTGAGGATTTACAACCCCCACGGTTAAATGAGGTCGCTGAAGAAGTCCCCGTTGCGCTGGTCTACAACGGCATTTCGCAT‑GGGGTGATGATGGCGTCGCCCAAAGA‑CCTTGAGTTC‑TTTGCG‑CTCGGTTTTT‑CGTTTTCCGAGGGGATTATCGAAAGTCCGCGCGATATCTTCGGCATGGATGTCGTTCCTTCCGG‑Taa < 2:898320/239‑1 (MQ=255) aCAAATATCACAGGTGTTCGTCAAATTGAGTTATGGCGGCGTGATGATTTACAACGCCCACGGTTAGATGAGGTCGCGGAAGAAGTTCCCGTTGCGCTGGTCTACAACGGCATTTCGCAT‑GTGGTGATGATGGCGTCGCCCAAAGA‑CCTTGAGTAC‑TTTGCG‑CTCGGTTTTT‑CGCTTTCCGAGGGGATTATCGAAAGTCCGCGCGATATCTTCGGCATGGATGTCGTTCCTTCCTG‑Taa < 1:1247193/239‑1 (MQ=255) cAAATTGCACCGGTGTTCGTCAAATTGAGTTATGGCGGCGTGATGATTTACAACCCCCACGGTTAGATGAGGTCGCGGAAGAAGGTCCCGGTGCGCTGGTCTACAACGGCATTTCGCAT‑GTGGTGATGATGGCGTCGCCCAAAGA‑CCTTGAGTAC‑TTTGCG‑CTCGGTTTTT‑CGCTTTCCGAGGGGATTATCGAAAGTCCGCGCGATATCTTCGGCATGGATGTCGTTCCTTCCTG‑Taa < 1:322873/238‑1 (MQ=255) gtTCGTCAAATTGAGTTATGGCGGCGTGATGATTTACAACACCCACGGTTAGATGGGGTCGCGGAAGAAGTTTCCGTTGCGCTGGTCTACAACGGCGTTTCGCCT‑GTGGTGATGATGGCGTCGCCCCAAGA‑CCTCGGGGAC‑TTTGCC‑GCCGGTTTTT‑CGCTTTCCCGGGGGTGTTTCGCAAGTCCGCCGGATATCTTTGGCCTGGATGTCGGTCCTTCCTG‑TAAAGGTCTTTAAGTACa > 2:108905/1‑239 (MQ=255) ttCGTCAAATTGAGTTATGGCGGCGTGATGATTTACAACCCCCACGGTTAGATGAGGTCGCGGGAGAAGTTCCCGTTGCGCTGGTCTACAACGGCATTTCGCAT‑GTGGGGATGAGGGCGTCGCCCAAAGA‑CACTGCGTAC‑TTTGCG‑ATCGGTTTTT‑CTCTTTCCCAGGGGGTTATTGGAAATCCTCTCGTTATCTTTGTCATGGATTCCGTGCCTTCCTT‑AAATGTCCTTGAAGTaaaa > 2:56718/1‑239 (MQ=255) aTTGAGTTATGGCGGCGTGATGATTTACAACACCCACGGTTAGATGAGGTCGCGGAAGAAGTTCCCGTTGCGCTGGTCTATAACGGCATTTCGCAT‑GTGGTGATGATGGCGTCGCCCAAAGA‑CCTTGAGTAC‑TTTGCG‑CTCGGTTTTT‑CGCTTTCCGAGGGGGTTATCGCAAGTCCGCGCGATATCTTCGGCATGGATGTCGTTCCTTCCTG‑TAATGGTCTTGAAGTACAAATTGAGCt > 1:673865/1‑239 (MQ=255) ttATGGCGGCGTGATGATTTACAACACCCACGGTTAGATGAGGTCGCGGAAGAAGTTCCCGTTGCGCTGGTCTACAACGGCATTTCGCAT‑GTGGTGATGATGGCGTCGCCCAAAGA‑CCTTGAGTAC‑TTTGCG‑CTCGGTTTTT‑CGCTTTCCGa > 1:439547/1‑152 (MQ=255) ttATGGCGGCGTGATGATTTACAACACCCACGGTTAGATGAGGTCGCGGAAGAAGTTCCCGTTGCGCTGGTCTACAACGGCATTTCGCAT‑GTGGTGATGATGGCGTCGCCCAAAGA‑CCTTGAGTAC‑TTTGCG‑CTCGGTTTTT‑CGCTTTCCGa < 2:439547/152‑1 (MQ=255) ttATGGCGGCGTGATGATTTACAAAACCCACGGTTAGATGAGGTCGCGGAAGAAGGTGCCGTTGCGCCTGTCTACAACGGCATTTCTCAT‑GTGGTGATGATGGCGTCGCCCCAAGC‑ACTTGTGTAC‑TTTGCG‑CTCGGTTTTT‑AGCGTTTCGCGGGGAGTATCGAAAGTCCTCGCGCTATCTTCGGCATGGATGT‑ATTGCTTTCTGCTGAAGGGCTTTGAGTAAAAATAGAGCTTTTCac > 2:1293024/1‑238 (MQ=255) tagggcggcGTGATGATTTACAACCCCCACGGTTAGATGAGGTCGCAGAAGAAGTTCCCGTTGCGCTGGTCTACAACGGCATTTCGCAT‑GTGGTGATGATGGCGTCGCCCAAAGA‑CCTTGAGTAC‑TTTGCG‑CTCGGTTTTT‑CGCTTTCCGAGGGGATTATCGAAAGTCCGCGCGATATCTTCGGCATGGATGTCGTTCCTTCCTG‑TAATGGTCTTGAAGTACAAATTGAGCTTTCCAgc < 1:309117/236‑1 (MQ=255) tGGCGGGGTTGTGGTTTCCAACCCCCACGGTTAGATGAGGTCGCGGAAGAAGTTCCCGTGGCGCTGGTCTATAACGGCATTTGTCAT‑GTGGTGATGATGGGGTCGCCCAAAGA‑CCTTGAGTAC‑TTTGCG‑CTCGGTTTTT‑CGCTTGCCGAGGGGATTATCGAAAGTCCGCGCGATATCTTCGGCATGGATGTCGTTCCTTCCTG‑TAATGGTCTTGAAGTACAAATTGAGCTTTCCAgccg < 2:673865/239‑1 (MQ=255) tGGCGGCGTGATGATTTACAACCCCCACGGTTAGATGAGGTCGCGGAAGAAGTTCCCGTTGCGCTGGTCTACAACGGCATTTCGCAT‑GTGGTGATGATGGCGTCGCCCAAAGA‑CCTTGAGTAC‑TTTGCG‑CTCGGTTTTT‑CGCTTTCCGAGGGGATTATCGAAAGTCCGCGCGATATCTTCGGCATGGATGTCGTTCCTTCCTG‑TAATGGTCTTGAAGTACAAATTGAGCTTTCCAgccg < 1:789215/239‑1 (MQ=255) ggcggcGTGATGATTTACAACCCCCACGGTTAGATGAGGTCGCGGAAGAAGTTCCCGTTGCGCTGGTCTACAACGGCATTTCGCAT‑GTGGTGATGATGGCGTCGCCCAAAGA‑CCTTGAGTAC‑TTTGCG‑CTCGGTTTTT‑CGCTTTCCGAGGGGATTATCGAAAGTCCGCGCGATATCTTCGGCATGGATGTCGTTCCTTCCTG‑TAATGGTCTTGAAGTACAAATTGAGCTTTCCAgccgc < 1:998278/239‑1 (MQ=255) gcgTGATGATTTACAACACCCACGGTTAGATGAGGTCGCGGAAGAAGTTCCCGTTGCGCTGGTCTACAACGGCATTTCGCAT‑GTGGTGATGATGGCGTCGCCCAAAGA‑CCTTGAGTAC‑TTTGCG‑CTCGGTTTTT‑CGCTTTCCGAGGGGATTATCGAAAGTCCGCGCGATATCTTCGGCATGGATGTCGTTCCTTCCTG‑TAATGGTCTTGAAGACAAAATTTGCCTTTCCAgcccccc > 1:1167587/1‑236 (MQ=255) cgTAATGATTTACAACCCCCACGGTTAGATTGGGTCGCGGAAGAAGTTCCCGTTGCGCTGGTCTACAACGGCATTTCGCAT‑GTGGTGATGATGGCGTCGCCCAAAGA‑CCTTGAGTAC‑TTTGCG‑CTCGGTTTTT‑CGCTTTCCGAGGGGATTATCGAAAGTCCGCGCGATATCTTCGGCATGGATGTCGTTCCTTCCTG‑TAATGGTCTTGAAGTACAAATTGAGCTTTCCAGCCGCCGCt < 1:701985/238‑1 (MQ=255) gttgttttACAACCCCCAGGTTTGGAGGGGGGCGGGGAAGAAGTTCTCGTGGCGCGGGTGTACAACGGTATTTCGCAG‑GTGGTGATGATGGCGTCGGCCAAGGA‑CCTTGAGTAC‑TTTGCG‑CTTGGTTTTT‑CGCTGTCCGAGGGGATTATCGAAAGTCCGCGCGATATCTTCGGCATGGATGTCGTTCCTTCCTG‑TAATGGTCTTGAAGTACAAATTGAGCTTTCCAGCCGCCGCTTTAt < 2:1239089/234‑1 (MQ=255) atgatTTACAACTCCCAGGGTTAGATGAGGTCGGGGAAGAAGTTCCCGTTGCGCTGGTCTACAACGGCATTTCGCAT‑GTGGTGATGATGGCGTCGCCCAAAGA‑CCTTGAGTAC‑TTTGCG‑CTCGGTTTTT‑CGCTTTCCGAGGGGATTGTCGAAAGTCCGCGCGATATCTTCGGCATGGATGTCGTTCCTTCCTG‑TAATGGTCTTGAAGTACAAATTGAGCTTTCCAGCCGCCGCTTTAt < 1:485055/238‑1 (MQ=255) atgatTTACAACCCCCACGGTTAGATGAGGTCGCGGAAGAAGTTCCCGTTGCGCTGGTCTACAACGGCATTTCGCAT‑GTGGTGATGATGGCGTCGCCCAAAGA‑CCTTGAGTAC‑TTTGCG‑CTCGGTTTTT‑CGCTTTCCGAGGGGATTATCGAAAGTCCGCGCGATATCTTCGGCATGGATGTCGTTCCTTCCTG‑TAATGGTCTTGAAGTACAAATTGAGCTTTCCAGCCGCCGCTTTAt < 1:205835/238‑1 (MQ=255) acacCCACGGTTAGATGAGGTCGCGGAAGAAGTTCCCGTTGCGCTGGTCTACAACGGCATTTCGCAT‑GTGGTGATGATGGCGTCGCCCAAAGA‑CCTTGAGTAC‑TTTGCG‑CTCGGTTTTT‑CGCTTTCCGAGGGGATTATCGAAAGTCCGCGCGATATCTTCGGCATGGATGTCGTTCCTTCCTG‑TAATGGTCTTGAAGTACAAATTGAGCTTTCCAGCCGCCGCTTTATGGGGTTGAAgg > 1:348975/1‑239 (MQ=255) ccACGGTTAGATGAGGTCGCGGAAGAAGTTCCCGTTGCGCTGGTCTACAACGGCATTTCGCAT‑GTGGTGATGATGGCGTCGCCCAAAGA‑CCTTGAGTAC‑TTTGCG‑CTCGGTTTTT‑CGCTTTCCGAGGGGATTATCGAAAGTCCGCGCGATATCTTCGGCATGGATGTCGTTCCTTCCTG‑TAATGGTCTTGAAGTACAAATTGAGCTTTCCAGCCGCCGCTTTATGGGGTTGAAGGAgc > 1:1074884/1‑238 (MQ=255) ccACGGTTAGATGAGGTCGCGGAAGAAGTTCCCGTTGCGCTGGTCTACAACGGCATTTCGCAT‑GTGGTGATGATGGCGTCGCCCAAAGA‑CCTTGAGTAC‑TTTGCG‑CTCGGTTTTT‑CGCTTTCCGACGGGATTATCGAAAGTCCGGGCGGTATCTTCGGCCTGGTTGTCATTCCTTCCTG‑TAATGGCTTTCAAGACAAAATTGGGTTTTCCAGCTGCCCCTTTTTGGGGTTGACGGAgg > 2:815505/1‑237 (MQ=255) aGATGAGGTCGCGGAAGAAGTTCCCGTTGCGCTGGTCTACAACGGCATTTCGCAT‑GTGGTGATGATGGCGTCGCCCAAAGA‑CCTTGAGTAC‑TTTGCG‑CTCGGTTTTT‑CGCTTTCCGAGGGGATTATCGAAAGTCCGCGCGATATCTTCGGCATGGATGTCGTTCCTTCCTG‑TAATGGTCTTGAAGTACAAATTGAGCTTTCCAGCCGCCGCTTTATGGGGTTGAAGGAGCGCCGCCggg > 1:1076436/1‑239 (MQ=255) gATGAGGTCGCGGAAGAAGTTCCCGTTGCGCTGGTCTACAACGGCATTTCGCAT‑GTGGTGATGATGGCGTCGCCCAAAGA‑CCTTGAGTAC‑TTTGCG‑CTCGGTTTTT‑CGCTTTCCGAGGGGATTATCGAAAGTCCGCGCGATATCTTCGGCATGGGTTTCGTTCCTTCCTG‑TAATGGCCTTGAAGGACAAATTAAGCTTTCCAGCCGCCGCTTTATGGGGTTGAGGGAGCGCCGCCGGgc > 1:564908/1‑239 (MQ=255) tGAGGTCGCGGAAGAAGTTCCCGTTGCGCTTGTCTACAACGGCATTTGGCAT‑GTGGTGATGATGGCGTCGCCAAAAGA‑CCTTGAGTAC‑TTTGCG‑CTCGGTTTTT‑CGCTTTCCGAGGGGATTATCGAAAGTCCGCGCGATATCTTCGGCATGGATGTCGTTCCTTCCTG‑TAATGGTCTTGAAGTACAAATTGAGCTTTCCAGCCGCCGCTTTATGGGGTTGAAGGAGCGCCGCCGGgcg < 1:630037/238‑1 (MQ=255) ggTCGCGGAAGAAGTTCCCGTTGCGCTGGTCTACAACGGCATTTCGCAT‑GTGGTGATGATGGCGTCGCCCAAAGA‑CCTTGAGTAC‑TTTGCG‑CTCGGTTTTT‑CGCTTTCCGAGGGGATTATCGAAAGTCCGCGCGATATCTTCGGCATGGATGTCGTTCCTTCCTG‑TAATGGTCTTGAAGTACAAATTGAGCTTTCCAGCCGCCGCTTTATGGGGTTGACGGAGCGCCGCCGGGCCCTgg > 1:115734/1‑239 (MQ=255) ggTCGCGGAAGAAGTTCCCGTTGCGCTGGTCTACAACGGCATTTCGCAT‑GTGGTGATGATGGCGTCGCCCAAAGA‑CCTTGAGTAC‑TTTGCG‑CTCGGTTTTT‑CGCTTTCCGAGGGGATTATCGAAAGTCCGCGCGATATCTTCGGCATGGATGTCGTTCCTTCCTG‑TAATGGTCTTGAAGTACAAATTGAGCTTTCCAGCCGCCGCTTTATGGGGTTGAAGGAGCGCCGCCGGGCGCTgg > 1:879695/1‑239 (MQ=255) ggTCGCGGAAGAAGTTCCCGTTGCGCTGGTCTACAACGGCATTTCGCAT‑GTGGTGATGATGGCGTCGCCCAAAGA‑CCTTGAGTAC‑TTTGCG‑CTCGGTTTTT‑CGCTTTCCGAGGGGATTATCGAAAGTCCGCGCGATATCTTCGGCATGGATGTCGTTCCTTCCTG‑TAATGGTCTTGAAGTACAAATTGAGCTTTCCAGCCGCCGCTTTATGGGGTTGAAGGAGCGCCGCCGGGCGCTgg > 1:1110183/1‑239 (MQ=255) ggTCGCGGAAGAAGTTCCCGTTGCGCTGGTCTACAACGGCATTTCGCAT‑GTGGTGATGATGGCGTCGCCCAAAGA‑CCTTGAGTAC‑TTTGCG‑CTCGGTTTTT‑CGCTTTCCGAGGGGATTATCGAAAGTCCGCCCGATATCTTCTGCATGGATGTCGTTCCTTCCTG‑TAATGGCCTTGAAGTACAAATTGCGCTTTCCAGCCGCCCTTTTAATGGGTTGAAGGAGGGCCGCCggggggcgg > 2:867196/1‑233 (MQ=255) ggTCGCGGAAGAAGTTCCCGTTGCGCTGGTCTACAACGGCATTTCGCAT‑GAGGTGATGATGGCGTCGCCCAAAGA‑CCTTGAGTAC‑TTTGCG‑CTCGGTTTTT‑CGCTTTCCGAGGGGATTATCGAAAGTCCGCGCGATATCTTCGGCCTGGATGTCGTTCCTTCCTG‑GAATGGTCTTTAAGGACAAATTGAGCTTTCCAACCCCCGCTTTATGGGGTTGAAAGAGCACCGCCGGGCGCAgg > 2:399799/1‑239 (MQ=255) gTCGCGGAAGAAGTTCCCGTTGCGCTGGTCTACAACGGCATTTCGCAT‑GTGGTGATGATGGCGTCGCCCAAAGA‑CCTTGAGTAC‑TTTGCG‑CTCGGTTTTT‑CGCTTTCCGAGGGGATTATTGAAAGTCCGCGCGATATCTTCGGCATGGATGTCGTTCCTTCCTG‑TAATGGTCTTGAAGTACAAATTGAGCTTTCCAGCCGCCGCTTTATGGGGTTAAAGGAGCGCCGCCGGGCCCTGGc > 1:1280842/1‑239 (MQ=255) gTCGCGGAAGAAGTTCCCGTTGCGCTGGTCTACAACGGCATTTCGCAT‑GTGGTGATGATGGCGTCGCCCAAAGA‑CCTTGAGTAC‑TTTGCG‑CTCGGTTTTT‑CGCTTTCCGAGGGGATTATCGAAAGTCCGCGCGATATCTTCGGCATGGATGTCGTTCCTTCCTG‑TAATGGTCTTGAAGTACAAATTGAGCTTTCCAGCCGCCGCTTTATGGGGTTGAAGGAGCGCCGCCGGGCGCTGGc > 1:558513/1‑239 (MQ=255) ggggaaaaatgtCCGGTGGCGCTGGTCTACACCGGTATTTCGGAT‑GGGGTGATGATGGGGTCGCCCAAAGC‑CCTTGGGTGC‑TTTGCG‑TGCGGTTTTT‑CGTTTCCCGAGGGGATTATCGAAAGTCCGGGCGATATCTTCGGCATGGATGTCGTTCCTTCCTG‑TAATGGTCTTGAAGTACAAATTGAGCTTTCCAGCCGCCGCTTTATGGGGTTGAAGGAGCGCCGCCGGGCGCTGGCgg < 2:317986/227‑1 (MQ=255) cgGAAGAAGTTCCCGTTGCGCTGGTCTACAACGGCATTTCGCAT‑GTGGTGATGATGGCGTCGCCCAAAGA‑CCTTGAGTAC‑TTTGCG‑CTCGGTTTTT‑CGCTTTCCGCGGGGATTATCGAAAGTCCGCGCGATATCTTCGGCATGGATGTCGTTCCTTCCTT‑TAATGGTCTTGAAGTACAAATTGAGCTTTCCAGCCCCCCCTTTATGGGGTTAAGGGAGCGCCGCCGGgcgggggggggg > 2:906227/1‑230 (MQ=255) cgGAAGAAGTTCCCGTTGCGCTGGTCTACAACGGCATTTCGCAT‑GTGGTGATGATGGCGTCGCCCAAAGA‑CCTTGAGTAC‑TTTGCG‑CTCGGTTTTT‑CGCTTTCCGAGGGGATTATCGAAAGTCCGCGCGATATCTTCGGCATGGATGTCGTTCCTTCCTG‑TAATGGTCTTGAAGTACAAATTGAGATTTCCAGCCGCCGCTTTATGGGGTTGAAGGAGGCCCCCCGGgcgtcggggggg > 2:577263/1‑230 (MQ=255) tCCCCTTCCGTTGGTTTCTAACGTTATTTCGATT‑GTGTTGATGAGGGCGCCGCACAAAGG‑CCTTGAGTAC‑TTTGCG‑CTCGGTTTTT‑CGCTTGCCGAGGGGATGATCGAAAGTCCGCGCGATATCTTCGGCATGGATGTCGTTCCTTCCTG‑TAATGGTCTTGAAGTACAAATTGAGCTTCCCAGCCGCCGCTTTATGGGGTTGAAGGAGCGCCGCCGGGCGCTGGCGGGACGTACGGGCt < 2:492144/239‑1 (MQ=255) cccGTTGCGCTGGTCTACAACGGCATTTCGCAT‑GTGGTGATGATGGCGTCGCCCAAAGA‑CCTTGAGTAC‑TTTGCG‑CTCGGTTTTT‑CGCTTTCCGAGGGGATTATCGAAAGTCCGCGCGATATCTTCGGCATGGATGTCGTTCCTTCCTG‑TAATGGTCTTGAAGTACAAATTGAGCTTTCCAGCCGCCGCTTTATGGGGTTGAAGGAGCGCCGCCGGGCGCTGGCGGGACGTACGGGCtg > 1:947595/1‑239 (MQ=255) cGTTGCGCTGGTCTACAACGGCATTTCGCAT‑GTGGTGATGATGGCGTCGCCCAAAGA‑CCTTGAGTAC‑TTTGCG‑CTCGGTTTTT‑CGCTTTCCGAGGGGATTATCGAAAGTCCGCGCGATATCTTCGGCATGGATGTCGTTCCTTCCTG‑TAATGGTCTTGAAGTACAAATTGAGCTTTCCAGCCGCCGCTTTATGGGGTTGAAGGAGCGCCGCCGGGCGCTGGCGGGACGTACGGGCtggg > 1:580846/1‑237 (MQ=255) ttgaCAACGTGATTTCGCAT‑GTGGTGATGATGGCGTCGCCCAAAGG‑CCTTGAGTAC‑TTTGCG‑CTCGGTTTTT‑CGCTTTCCGAGGGGATTATCGAAAGTCCGCGCGATATCTTCGGCATGGATGTCGTTCCTTCCTG‑TAATGGTCTTGAAGTACAAATTGAGCTTTCCAGCCGCCGCTTTATGGGGTTGAAGGAGCGCCGCCGGGCGCTGGCGGGACGTACGGGCTGTGGCGTATgcgg < 1:52907/235‑1 (MQ=255) cTACAACGGCATTTCGCAT‑GTGGTGATGATGGCGTCGCCCAAAGG‑CCTTGAGTTC‑TTTGCG‑CTCGGTTTTT‑CGCTTTCCGAGGGGATTATCGAAAGTCCGCGCGATATCTTCGGCATGGATGTCGTTCCTTCCTG‑TAATGGTCTTGAAGTACAAATTGAGCTTTCCAGCCGCCGCTTTATGGGGTTGAAGGAGCGCCGCCGGGCGCTGGCGGGACGTACGGGCTGTGGCGTATgcggcg < 1:1140642/239‑1 (MQ=255) cTACAACGGCATTTCGCAT‑GTGGTGATGATGGCGTCGCCCAAAGA‑CCTTGAGTAC‑TTTGCG‑CTCGGTTTTT‑CGCTTTCCGAGGGGATTATCGAAAGTCCGCGCGATATCTTCGGCATGGATGTCGTTCCTTCCTG‑TAATGGTCTTGAAGTACAAATTGAGCTTTCCAGCCGCCGCTCTATGGGGTTGAAGGAGCGCCGCCGGGCGCTGGCGGGACGTACGGGCTGTGGCGTATgcggcg < 1:1045493/239‑1 (MQ=255) cTAAAACGTCTTTTCGGAT‑GTGGTGATTGTGGCGTCGCCCAAAGA‑CCTTGAGTAC‑TTTGCG‑CTCGGTTTTT‑CGCTTTCCGAGGGGATTATCGAAAGTCCGCGCGATATCTTCGGCATGGATGTCGTTCCTTCCTG‑TAATGGTCTTGAAGTACAAATTGAGCTTTCCAGCCGCCGCTTTATGGGGTTGAAGGAGCGCCGCCGGGCGCTGGCGGGACGTACGGGCTGTGGCGTATgcggcg < 1:356851/239‑1 (MQ=255) ccgggcttttGCAT‑TTGGTGTTATTGGCGTCGCCCAAAGC‑CCGTAGGTAC‑TTGGCG‑CTCGGTTTTT‑CGCTGTCCGAGGGGATTAGCGAAAGTCCGCGGGATATCTTCGGCATGGATGCCGTTCCTTCCTG‑TAATGGTCTTGAAGTACAAATTGAGCTGTCCAGCCGCCGCTTTATGGGGTTGAAGGAGCGCCGCCGGGCGCTGGCGGGACGTACGGGCTGTGGCGTATGCGGCGTGGAg < 2:1022994/233‑1 (MQ=255) gggtttttCGCGT‑GTGGGGCTGTGTGCATCGCCCAAAGT‑CCTGGAGTGC‑TTGTCT‑GTTGGTTTTT‑TGTTTCCCGTGGGGATTATTGAAAGTCTGGGCGATATCGTCGGCATGGATGTCGTTCCTTCCTG‑TAATGGGTTGGAAGTACAAATTGAGCTTTCCAGCCGCCGCTTTATGGGGTTGAAGGAGCGCCGCCGGGCGCTGGCGGGACGTACGGGCTGTGGCGTATGCGGCGTGGAGc < 2:1280842/234‑1 (MQ=255) cGGCATTTCGAAT‑GTGGTGATGATGGCGTCGCCCAAAGA‑CCTTGAGTCC‑TTTGCG‑CTCGGTTTTT‑CGCTTTCCGAGGGGATTATCGAAAGTCCGCGCGATATCTTCGGCATGGATGTCGTTCCTTCCTG‑TAATGGTCTTGAAGTACAAATTGAGCTTTCCAGCCGCCGCTTTATGGGGTTGAAGGAGCGCCGCCGGGCGCTGGCGGGACGTACGGGCTGTGGCGTATGCGGCGTGGAGc < 1:1293024/239‑1 (MQ=255) gCATTTCGCAT‑GTGGTGATGATGGCGTCGCCCAAAGA‑CCTTGAGTAC‑TTTGCG‑CTCGGTTTTT‑CGCTTTCCGCGGGGATTATCGAAAGTCCGCGCGATATCTTCGGCATGGATGTCGTTCCTTCCTG‑TAATGGTCTTGAAGTACAAATTGAGCTTTCCAGCCGCCGCTTTATGGGGTTGAAGGAGCGCCGCCGGGCGCTGGCGGGACGTACGGGCTGTGGCGTATGCGGCGTGGAGCa > 1:1007876/1‑238 (MQ=255) gCATTTCGCAT‑GTGGTGATGATGGCGTCGCCCAAAGA‑CCTTGAGTAC‑TTTGCG‑CTCGGTTTTT‑CGCTTTCCGAGGGGATTATCGAAAGTCCGCGCGATATCTTCGGCATGGATGTCGTTCCTTCCTG‑TAATGGTCTTGAAGTACAAATTGAGCTTTCCAGCCGCCGCTTTATGGGGTTGAAGGAGCGCCGCCGGGCGCTGGCGGGACGTACGGGCTGTGGCGCATGCGGCGTGGAGCa > 1:799797/1‑238 (MQ=255) gCATTTCGCAT‑GTGGTGATGATGGCGTCGCCCAAAGA‑CCTTGAGTAC‑TTTGCG‑CTCGGTTTTT‑CGCTTTCCGAGGGGATTATCGAAAGTCCGCGCGATATCTTCGGCATGGATGGCGTTCCTTCCTG‑TAATGGTCTTGAAGTACAAATTGAGATTTCCAGCCGCCGCCTTATTGGGTTGAGGAAGCGCCGACGGGCCCGGGGGGGACGTACGGGCTTGGGCGGATCCGGCggggggga > 2:530342/1‑234 (MQ=255) cATTTCGCAT‑GTGGTGATGATGGCGTCGCCCAAAGA‑CCTTGAGTAC‑TTTGCG‑CTCGGTTTTT‑CGCTTTCCGAGGGGATTATCGAAAGTCCGCGCGATATCTTCGGCATGGATGTCGTTCCTTCCTG‑TAATGGTCTTGAAGTACAAATTGAGCTTTCCAGCCGCCGCTTTATGGGGTTGAAGGAGCGCCGCCGGGCGCTGGCGGGACGTACGGGCTGTGGCGTATGCGGCGTGGGGCa > 1:970619/1‑237 (MQ=255) tttCGCAT‑GTGGTGATGATGGCGTCGCCCACAGA‑CCTTGAGTAC‑TTTGCG‑CTCGGTTTTT‑CGCTTTCCGAGGGGATTATCGAATGTCCGCGCGATATCTTCGGCATGGATGTCGTTCCTTCCTG‑TAATGGTCTTGAAGTACAAATTGAGCTTTCCAGCCGCCGCTTTATgg > 1:1274322/1‑171 (MQ=255) tttCGCAT‑GTGGTGATGATGGCGTCGCCCAAAGA‑CCTTGAGTAC‑TTTGCG‑CTCGGTTTTT‑CGCTTTCCGAGGGGATTATCGAAAGTCCGCGCGATATCTTCGGCATGGATGTCGTTCCTTCCTG‑TAATGGTCTTGAAGTACAAATTGAGCTTTCCAGCCGCCGCTTTATGGGGTTGAAGGAGCGCCGCCGGGCGCTGCCGGGACGTACGGGCTGTGGCGTATGCGGCGTGGGGCAACtt > 1:813886/1‑239 (MQ=255) ttggtgTTGTTGGCGGCGCCCAAAGC‑CTTTGGATTC‑TGTGCC‑CTTGTTTTGT‑CCCTTCCCGAGGGGATTACCAAAAGGCCGCAGGATTTCTTCGGCTTGGATGTCTTTCCTTCCTG‑TAATGGTCTTGAAGTACAAAGTGCGCTTTCCAGCCGCCGCTTTATGGGGTTGAAGGAGCGCCGCCGGGCGCTGGCGGGACGTACGGGCTGTGGCGTATGCGGCGTGGAGCAACTTAATGACAt < 2:646014/238‑1 (MQ=255) atgatgGCGTCGCCCAAAGA‑CCTTGAGTAC‑TTTGCG‑CTCGGTTTTT‑CGCTTTCCGAGGGGATTATCGAAAGTCCGCGCGATATCTTCGGCATGGATGTCGTTCCTTCCTG‑TAATGGTCTTGAAGTACAAATTGAGCTTTCCAGCCGCCGCTTTATGGGGTTGAAGGAGCGCCGCCGGGCGCTGGCGGGACGTACGGGCTGTGGCGTATGCGGCGTGGGGCAACTTAATGACATCGGaa > 1:332460/1‑238 (MQ=255) tgGCGTCGCCCAAAGA‑CCTTGAGTAC‑TTTGCG‑CTCGGTTTTT‑CGCTTTCCGAGGGGATTATCGAAAGTCCGCGCGATATCTTCGGCATGGATGTCGTTCCTTCCTG‑TAATGGTCTTGAAGTACAAATTGAGCTTTCCAGCCGCCGCTTTATGGGGTTGAAGGAGCGCCGCCGGGCGCTGGCGGGACGTACGGGCTGTGGCGTATGCGGCGTGGGGCAACTTAATGACATCGGAAAACCg > 1:246922/1‑239 (MQ=255) cGTCGCCCAAAGA‑CCTTGAGTAC‑TTTGCG‑CTCGGTTTTT‑CGCTTTCCGAGGGGATTATCGAAAGTCCGCGCGATATCTTCGGCATGGATGTCGTTCCTTCCTG‑TAATGGTCTTGAAGTACAAATTGAGCTTTCCAGCCGCCGCTTTATGGGGTTGAAGGAGCGCCGCCGGGCGCTGGCGGGACGTa > 2:459959/1‑186 (MQ=255) cGTCGCCCAAAGA‑CCTTGAGTAC‑TTTGCG‑CTCGGTTTTT‑CGCTTTCCGAGGGGATTATCGAAAGTCCGCGCGATATCTTCGGCATGGATGTCGTTCCTTCCTG‑TAATGGTCTTGAAGTACAAATTGAGCTTTCCAGCCGCCGCTTTATGGGGTTGAAGGAGCGCCGCCGGGCGCTGGCGGGACGTa < 1:459959/186‑1 (MQ=255) cGTCGCCCAAAGA‑CCTTGAGTAC‑TTTGCG‑CTCGGTTTTT‑CGCTTTCCGAGGGGATTATCGAAAGTCCGCGCGATATCTGCGGCATGGATGTCGTTCCTTCCTG‑TAATGGTCTTGAAGTACAAATTGAGCTTTCCAGCCGCCGCTTTATGGGGTTGAAGGAGCGCCGCCGGGCGCTGGCGGGACGTACGGGCTGTGGCGTATGCGGCGTGGAGCAACTTAATGACATCGGAAAACCGGt < 1:906227/238‑1 (MQ=255) cGCCCAAAGA‑CCTTGAGTAC‑TTTGCG‑CTCGGTTTTT‑CGCTTTCCGAGGGGATTATCGAAAGTCCGCGCGATATCTTCGGCATGGATGTCGTTCCTTCCTG‑TAATGGTCTTGAAGTACAAATTGAGCTTTCCAGCCGCCGCTTTATGGGGTTGAAGGAGCGCCGCCGGGCGCTGGCGGGACGTACGGGCTGTGGCGTATGCGGCGTGGGGCAACTTAATGACATCGGAAAACCGGTGCa > 1:610578/1‑238 (MQ=255) gCCCAAAGC‑CCTTGAGTAG‑TTTGCT‑CTCGTTTTTT‑CGTTTTCCGAGGGGATTATCGAAAGGCCGCGCGATATCTTCGGCATGGATGTCGTTCCTTCCTG‑TAATGGTCTTGAAGTACAAATTGAGCTTTCCAGCCGCCGCTTTATGGGGTTGAAGGAGCGCCGCCGGGCGCTGGCGGGACGTACGGGCTGTGGCGTATGCGGCGTGGAGCAACTTAATGACATCGGAAAACCGGTGCAGc < 1:1204179/239‑1 (MQ=255) aaaGC‑CCTTGGGTTC‑TTTGCG‑CTAGGTTTTT‑CGCTTTCCGAGGGGATTACCGAAAGTCCGCGCGATATCTTCGGCATGGATGTCGTTCCTTCCTG‑TAATGGTCTTGAAGTACAAATTGAGCTTTCCAGCCGCCGCTTTATGGGGTTGAAGGAGCGCCGCCGGGCGCTGGCGGGACGTACGGGCTGTGGCGTATGCGGCGTGGAGCAACTTAATGACATCGGAAAACCGGTGCAGCCGCt < 1:4242/239‑1 (MQ=255) tGAGTAC‑TTTGCG‑CTCGGTTTTT‑CGCTTTCCGAGGGGATTATCGAAAGTCCGCGCGATATCTTCGGCATGGATGTCGTTCCTTCCTG‑TAATGGTCTTGAAGTACAAATTGAGCTTTCCAGCCGCCGCTTTATGGGGTTGAAGGAGCGCCGCCGGGCGCTGGCGGGACGTACGGGCTGTGGCGTATGCGGCGTGGAGCAACTTAATGACATCGGAAAACCGGTGCAGCCGCTACCGTTc > 1:825966/1‑238 (MQ=255) | TAACAGAATACCATAATGTTGGTGTGTGTGTTCTTATCTGGTTAAGAGAAAGTGAAAAAAACACAGCGAAAAGAAATCGAAAATGTG‑ACAAATATCACAGGTGTTCGTCAAATTGAGTTATGGCGGCGTGATGATTTACAACACCCACGGTTAGATGAGGTCGCGGAAGAAGTTCCCGTTGCGCTGGTCTACAACGGCATTTCGCAT‑GTGGTGATGATGGCGTCGCCCAAAGA‑CCTTGAGTAC‑TTTGCG‑CTCGGTTTTT‑CGCTTTCCGAGGGGATTATCGAAAGTCCGCGCGATATCTTCGGCATGGATGTCGTTCCTTCCTG‑TAATGGTCTTGAAGTACAAATTGAGCTTTCCAGCCGCCGCTTTATGGGGTTGAAGGAGCGCCGCCGGGCGCTGGCGGGACGTACGGGCTGTGGCGTATGCGGCGTGGAGCAACTTAATGACATCGGAAAACCGGTGCAGCCGCTACCGTTC > NC_000913/4085965‑4086438 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |