Predicted mutation
evidence seq id position mutation freq annotation gene description
RA NC_000913 4,487,250 C→T 9.9% L345F (CTC→TTC)  lptF → lipopolysaccharide export ABC permease

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009134,487,2500CT 9.9% 318.1 / 2.1 119L345F (CTC→TTC) lptFlipopolysaccharide export ABC permease
Reads supporting (aligned to +/- strand):  ref base C (44/58);  new base T (9/5);  total (55/64)
Fisher's exact test for biased strand distribution p-value = 1.61e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.98e-01

Only 100 of 122 total aligned reads displayed.

CTGAACTGGCGTATCACGTTGGTATTCACCGTGTTTATGATGGCACTTATGGTCGTACCGCTGAGCGTGGTTAACCCACGTCAGGGACGCGTACTGTCGATGCTGCCAGCCATGCTGCTGTATCTACTTTTCTTCCTGATCCAGACCTCCCTGAAATCGAACGGCGGTAAAGGTAAGCTGGACCCGACGCTGTGGA‑TGTGGACCGTT‑AACCTGATTTATCTGGCTTTAGCGATTGTTCTCA‑A‑CCTTT‑G‑GGACACCGTGCC‑GGTCCGCCGCCTG‑CGCGCCAGTTTTTCGCGTAAAGGAGCGGTGTGATGCAACCTTTTGGCGTACTTGACCGCTATATCGGTAAAACTATTTTCACCACCATCATGATGACACTGTTCATGCTGGTGTCGCTGTCGGGCATTATCAAGTTTGTCGA‑TCAGCTGAAAAAAGCCGGGCAGGGGAGTTACGACGCGTTAGGCGCAGGAATGTATACCTTG  >  NC_000913/4487013‑4487488
                                                                                                                                                                                                                                               |                                                                                                                                                                                                                                                     
        gCGTATCACGTTGGTATTCACCGTGTTTATGATGGCACTTATGGTCGTACCGCTGAGCGTGGTTAACCCACGTCAGGGACGCGTACTGTCGATGCTGCCAGCCATGCTGCTGTATCTCCTTTTCTTCCTGATCCAGACCTCCCTGAAATCGAACGGCGGAAAAGGGAAACTGGACCCGAACCTATGGG‑TGTGGACCGCT‑ACACACTTTTATCTTGGTTTAACAGTTGTTTTCT‑A‑ccctg                                                                                                                                                                                                                                            >  2:188293/1‑236 (MQ=255)
        gCGTATCACGTTGGTATTCACCGTGTTTATGATGGCACTTATGGTCGTACCGCTGAGCGTGGTTAACCCACGTCAGGGACGCGTACTGTCGATGCTGCCAGCCATGCTGCTGTATCTACTTTTCTTCCTGATCCAGACCTCCCTGAAATCGAACGGCGGTAAAGGGAAACTGGGCCCGCACCGTTGGG‑TGTGGGCCGTT‑AACCCGTTTTTTTTGTGTTTATGTATTTTTTTCA‑A‑CCttt                                                                                                                                                                                                                                            >  1:586573/1‑239 (MQ=255)
            ttctcGTTGGTTTTCCCCGTTTTTTGTGTGGCATTTAGGGTCGTGCCGCTGAGCGGGGTTAACCCACGTCAGGGACGCGTCCTGTCGATGCTGCCAGCCATGCTGCTGTATCTACTTTTCTTCCTGATCCAGACCTCCCTGAAATCGAACGGCGGTAAAGGTAAGCTGGACCCGACGCTGTGGA‑TGTGGACCGTT‑AACCTGATTTATCTGGCTTTAGCGATTGTTCTCA‑A‑CCTTT‑G‑GGa                                                                                                                                                                                                                                      <  2:63653/235‑1 (MQ=255)
             tCACGTTGGTATTCACCGTGTTTATGATGGCACTTATGGTCGTACCGCTGAGCGTGGTTAACACACGTCAGGGACGCGTACTGACGATGCTGCCAGCCATGCTGCTGTATCTACTTTTCTTCCTGCTCCAGACCTCCCTGAAATCGAACGGCGGTAAAAGTCAACTGGACCCGCCGCTGATGG‑TGTGGGCCGTTAAACCTG‑GTTATCTGGAGTTAGGGGGGTTTCTCA‑A‑cccatgtgac                                                                                                                                                                                                                                       >  2:1123465/1‑231 (MQ=255)
                             cGTGTTTATGATGGCACTTATGGTCGTACCGCTGAGCGTGGTTAACCCACGTCAGGGACGCGTACTGTCGATGCTGCCAGCCATGCTGCTGTATCTACTTTTCTTCCTGATCCAGACCTCCCTGAAATCGAACGGCGGTAAAGGTAAGCTGGACCCGACGCTGTGGA‑TGTGGACCGTT‑AACCTGATTTATCTGGCTTTAGGGATTGTTCTCA‑A‑CCCTT‑T‑GGGCAACGTGCC‑GGTcccc                                                                                                                                                                                                                     >  1:559794/1‑236 (MQ=255)
                               tgtTTATGATGGCACTTATGGTCGTACCGCTGAGCGTGGTTAACCCACGTCAGGGACGCGTACTGTCGATGCTGCCAGCCATTCTGCTGTATCTACTTTTCTTCCTGATCCAGACCTCCCTGAAATCGAACGGCGGTAAAAGGAAGCTGGACCCGACGCTGCGGA‑TGTGGGCCGCG‑CACCTGGTTTATCTGGGTTTTGCACTTGTTCTCC‑A‑CCTTT‑T‑GGACACCGGGCC‑GGGGcgccgc                                                                                                                                                                                                                  >  2:1117767/1‑239 (MQ=255)
                                         ggCACTTATGGTCGTACCGCTGAGCGTGGTTAACCCACGTCAGGGACGCGTACTGTCGATGCTGCCAGCCATGCTGCTGTATCTACTTTTCTTCCTGATCCAGACCTCCCTGAAATCGAACGGCGGTCAAGGTAAGCGTGACCCCACGCTGTGGAGTGTGG‑CAGTT‑AACCTGATTTATCTTGCTTTTACGATTGTGTTAC‑A‑CCTTT‑G‑GGACACCCGGCC‑CGTCCccggcccgtgggccc                                                                                                                                                                                                        >  2:959689/1‑230 (MQ=255)
                                         ggCACTTATGGTCGTACCGCTGAGCGTGGTTAACCCACGTCAGGGACGCGTACTGTCGATGCTGCCAGCCATGCTGCTGTATCTACTTTTCTTCCTGATCCAGACCTCCCTGAAATCGAACGGCGGTAAAGGTAAGCTGGACCCGCCGCTGTGGA‑TTTGGACCGGT‑AACCTGATTTATTTGGCTTTAGCGATTGTTTTCA‑A‑CCTTT‑T‑GGACACCGGGCC‑GGTCCGCCGCCtcccgcccc                                                                                                                                                                                                        >  1:462487/1‑231 (MQ=255)
                                         ggCACTTATGGTCGTACCGCTGAGCGTGGTTAACCCACGTCAGGGACGCGTACTGTCGATGCTGCCAGCCATGCTGCTGTATCTACTTTTCTTCCTGATCCAGACCTCCCTGAAATCGAACGGCGGTAAAGGTAAGCTGGACCCGACGCTCTGGA‑TGTGGACCGTT‑AACCTGGTTTATCTGGCTTTAGCGATTGTTTTCA‑A‑CCTTT‑G‑GGACACCCTGCC‑GGGCCGCCGCCTG‑CGCGCCa                                                                                                                                                                                                       >  1:911285/1‑239 (MQ=255)
                                         ggCACTTATGGTCGTACCGCTGAGCGTGGTTAACCCACGTCAGGGACGCGTACTGTCGATGCTGCCAGCCATGCTGCTGTATCTACTTTTCTTCCTGATCCAGACCTCCCTGAAATCGAACGGCGGTAAAGGTAAGCTGGACCCGACGCCGTGGG‑TGTGGACCGTT‑AACCTGATTTATTCGGCTTTAGCGATTTTTCTCA‑A‑CCTTT‑T‑GGACACCGTGCC‑GGTCCCCCGCCTg‑cgcgc                                                                                                                                                                                                         >  1:1271427/1‑237 (MQ=255)
                                           cACTTATGGTCGTACCGCTGAGCGTGGTTAACCCACGTCAGGGACGCGTACTGTCGATGCTGCCAGCCATGCTGCTGTATCTACTTTTCTTCCTGATCCAGACCTCCCTGAAATCGAACGGCGGTAAAGGTAAGCTGGACCCGCCGCTGCGGA‑TGTGGGCAGTG‑AACCTGATTTATCTTGCTTTCGCCATTGTTTTCA‑ACCCTTT‑G‑GAACACC‑TGCCGGGTCCCCCCCTGG‑CGCGCCAg                                                                                                                                                                                                      >  2:1198632/1‑239 (MQ=255)
                                              tttgggTCGTACCGTGGACGGTGGTTAACCCACGCCAGGGACCCGTACTGTCGATGCTGCCAGCCATGCTGCTGTATCTACTTTTCTTCCTGATCCAGACCTCCCTGAAATCGAACGGCGGTAAAGGTAAGCTGGACCCGACGCTGTGGA‑TGTGGACCGTT‑AACCTGATTTATCTGGCTTTAGCGATTGTTCTCA‑A‑CCTTT‑G‑GGACACCGTGCC‑GGTCCGCCGCCTG‑CGCGCCAGtttt                                                                                                                                                                                                  <  1:839623/235‑1 (MQ=255)
                                                     cGTACGGCTGGGCGTGGTTAACCCACGTCAGGGACGCGTACTGTCGATGCTGCCAGCCATGCTGCTGTATCTACTTTTCTTCCTGATCCAGACCTCCCTGAAATCGAACGGCGGTAAAGGTAAGCTGGACCCGACGCTGTGGA‑TGTGGACCGTT‑AACCTGATTTATCTGGCTTTAGCGATTGTTCTCA‑A‑CCTTT‑G‑GGACACCGTGCC‑GGTCCGCCGCCTG‑CGCGCCAGTTTTTCGCGTa                                                                                                                                                                                           <  1:367416/239‑1 (MQ=255)
                                                     cGTACCGCTGGGCGTGGTTAACCCAAGTCAGGGACGCGTACTGTCGATGCTGCCAGCCATGCTGCTGTATCTACTTTTCTTCCTGATCCAGACCTCCCTGAAATCGAACGGCGGTAAAGGTAAGCTGGACCCGACGCTGTGGA‑TGTGGACCGTT‑AACCTGATTTATCTGGCTTTAGCGATTGTTCTCA‑A‑CCTTT‑G‑GGACACCGTGCC‑GGTCCGCCGCCTG‑CGCGCCAGTTTTTCGCGTa                                                                                                                                                                                           <  1:549892/239‑1 (MQ=255)
                                                        aCCGCTGAGCGTGGTTAACCCACGTCAGGGACGCGTACTGTCGATGCTGCCAGCCATGCTGCTGTATCTACTTTTCTTCCTGATCCAGACCTCCCTGAAATCGAACGGCGGTAAAGGTAAGCTGTACCCGACGCTGTGGA‑TGGGGACCGTT‑AACCTGATTTATCTGGCTTTAGCGCTGGTTTTCA‑A‑CCTTT‑G‑GGGCACCGCTCG‑GGTCGGCCGCCTG‑CGCGCCCGCTTTTCGCTTAAAg                                                                                                                                                                                        >  1:909375/1‑239 (MQ=255)
                                                        aCCGCTGAGCGTGGTTAACCCACGTCAGGGACGCGTACTGTCGATGCTGCCAGCCATGCTGCTGTATCTACTTTTCTTCCTGATCCAGACCTCCCTGAAATCGAACGGCGGTAAAGGTAAGCTGGACCCGACGCCGTGGG‑TGTGGGCCGTT‑AACCTGATTTATCTGGCTTTAGCGATTGTTCTCC‑A‑CCCTT‑G‑GGACAACGTGCC‑GGGCCGCCGCCTG‑GTCGCCAGTTTTTCCCGTGAAg                                                                                                                                                                                        >  1:1034277/1‑239 (MQ=255)
                                                         ccGCTGAGCGTGGTTACCCACCGTCAGGGACGCGTACTGGCGATGCTGCCAGCCATGCTGCTGTATCTACTTTTCGTCCTGATCCAGACCTCCCTGAAATCGAACGGCGGTAAAGGTAAGCTGGACCCGACGCTGTGGA‑TGTGGACCGTT‑AACCTGATTTATCTGGCTTTAGCGATTGTTCTCA‑A‑CCTTT‑G‑GGACACCGTGCC‑GGTCCGCCGCCTG‑CGCGCCAGTTTTTCGCGTAAAg                                                                                                                                                                                        <  1:319250/238‑1 (MQ=255)
                                                          cgatGATCGTTGTTACCCCACTTCGGGGACGCGTACTTTCGATGTTTCACTCAATGCTTCTGTATCTACTTTTCTTCCTGATCCAGGCCTCCCGGAAACCGACCGGCGGTAAAGGTACGCTGGACCCGACGCTGTGGA‑TGTGGACCGTT‑AACCTGATTTATCTGGCTTTAGCGATTGTTCTCA‑A‑CCTTT‑G‑GGACACCGTGCC‑GGTCCGCCGCCTG‑CGCGCCAGTTTTTCGCGTAAAGGa                                                                                                                                                                                      <  2:1273939/236‑1 (MQ=255)
                                                           gCTGGGCGTGGTTACCCCACGTCAGGGACGCGTACTGTCGATGCTGCCAGCCATGCTGCTGTATCTACTTTTCTTCCTGATCCAGACCTCCCTGAAATCGAACGGCGGTAAAGGTAAGCTGGACCCGACGCTGTGGA‑TGTGGACCGTT‑AACCTGATTTATCTGGCTTTAGCGATTGTTCTCA‑A‑CCTTT‑G‑GGACACCGTGCC‑GGTCCGCCGCCTG‑CGCGCCAGTTTTTCGCGTAAAGGAg                                                                                                                                                                                     <  1:1287702/239‑1 (MQ=255)
                                                           cgtggggggtgTTAACCCACGTTGGGGACGCTGTCTGTCGATGCGGCAGGCCATGTGTCTTGAGTTCCTTGTCTTCCTGATCCAGACCGCCCGGAAATCGAACGGCGGTAAAGGTAAGCTGGACCCGACGCTGTGGA‑TGTGGACCGTT‑AACCTGATTTATCTGGCTTTAGCGATTGTTCTCA‑A‑CCTTT‑G‑GGACACCGTGCC‑GGTCCGCCGCCTG‑CGCGCCAGTTTTTCGCGTAAAGGAg                                                                                                                                                                                     <  2:486673/229‑1 (MQ=255)
                                                              gAGCGTGGTTAACCCACGTCAGGGACGCGTACTGTCGATGCTGCCAGCCATGCTGCTGTATCTACTTTTCTTCCTGATCCAGACCTCCCTGAAATCGAACGGCGGTAAAGGTAAGCTGGACCCGACGCTGTGGA‑TGTGGACCGTT‑AACCTGATTTATCTGGCTTTAGCGATTGTTCTCA‑A‑CCTTT‑T‑GGACACCGTGCC‑GGTCCGCCGCCTG‑CGCGCCCGTTTTTTGCGTAAAGGAGCgg                                                                                                                                                                                  >  1:1136511/1‑239 (MQ=255)
                                                               aGCGTGGTTAACCCACGTCAGGGACGCGTACTGTCGATGCTGCCAGCCATGCTGCTGTATCTACTTTTCTTCCTGATCCAGACCTCCCTGAAATCGAACGGCGGTAAAGGTAAGCTTGACCCGACGCTGTGGC‑TGGGGACCGGT‑AACC‑GATTTTCATGGCTTTACGGGATGTTTTCA‑A‑CCTTTGG‑GGCCACCG‑CCC‑GGTGCGCCCCCCGCCGTGCCGGTTTTTCGGCTAAAgagggggg                                                                                                                                                                                 >  2:811961/1‑232 (MQ=255)
                                                                gcttGGTTAACCCGCGTCAGGGACGCGTACTGTCGATGCTGCCAGCCATGCTTCTGTATCTACTTTTCTTCCTGATCCAGACCTCCCTGAAATCGAACGGCGGTAAAGGTAAGCTGGACCCGACGCTGTGGA‑TGTGGACCGTT‑AACCTGATTTATCTGGCTTTAGCGATTGTTCTCA‑A‑CCTTT‑G‑GGACACCGTGCC‑GGTCCGCCGCCTG‑CGCGCCAGTTTTTCGCGTAAAGGAGCGgt                                                                                                                                                                                 <  1:980179/235‑1 (MQ=255)
                                                                gCGTGGCAAACCCACGTCAGGGACGCGTACTGTCGATGCTGCCAGCCATGCTGCTGTATCTACTTTTCTTCCTGATCCAGACCTCCCTGAAATCGAACGGCGGTAAAGGTAAGCTGGACCCGACGCTGTGGA‑TGTGGACCGTT‑AACCTGATTTATCTGGCTTTAGCGATTGTTCTCA‑A‑CCTTT‑G‑GGACACCGTGCC‑GGTCCGCCGCCTG‑CGCGCCAGTTTTTCGCGTAAAGGAGCGgt                                                                                                                                                                                 <  1:432502/238‑1 (MQ=255)
                                                                  gTGGTTAACCCACGTCAGGGACGCGTACTGTCGATGCTGCCAGCCATGCTGCTGTATCTACTTTTCTTCCTGATCCAGACCTCCCTGAAATCGAACGGCGGCAAAAGTAAGCTGGACCCGACGCCCTGGG‑TGTGGACCGTG‑ACACTGATTTATTCGGCTTTAGCGCTTGTT‑TCACA‑CCTTT‑GTGGACCCCG‑GCC‑GGGCCCCCGCCGC‑CCCGCCTGGTTTTCGCGGaaaacggggggggg                                                                                                                                                                              >  2:758083/1‑228 (MQ=255)
                                                                   tGGTTAACCCGCGGCAGGGACGCGTACTGTCGGAGCTGCCAGCCATGCTGCTGTATCTACTTTTCTTCCTGACCCAGGCCCTCCTGAAATCGAACGGCGGTAAAGGTAAGCTGGACCCGACGCTGTGGA‑TGTGGACCGTT‑AACCTGATTTATCTGGCTTTAGCGATTGTTCTCA‑A‑CCTTT‑G‑GGACACCGTGCC‑GGTCCGCCGCCTG‑CGCGCCAGTTTTTCGCGTAAAGGAGCGGtgtg                                                                                                                                                                              <  1:190099/238‑1 (MQ=255)
                                                                    ggTTAACCCACGTCAGGGACGCGTACTGTCGATGCTGCCAGCCATGCTGCTGTATCTACTTTTCTTCCTGATCCAGCCCTCCCTGAAATCGAACGGCGGTAAAGGTAAGCTGGACCCGACGCTGTGGA‑TGTGGACCGTT‑AACCTGATTTATCTGGCTTTAGCGATTGTTCTCA‑A‑CCTTT‑G‑GGACACCGTGCC‑GGTCCGCCGCCTG‑CGCGCCAGTTTTTCGCGTa                                                                                                                                                                                           <  1:601728/224‑1 (MQ=255)
                                                                       taccccACGTTAGGGACGGTTTCTGTCGCTGCTGCCCGCCATGCTGCTGATTTGTCTTTTCTTCCTGATCCAGACCTCCCTGAAATCGAGCGGCGGTAAAGGTAAGCTGGACCCGACGCTGTGGA‑TGTGGACCGTT‑AACCTGATTTATCTGGCTTTAGCGATTGTTCTCA‑A‑CCTTT‑G‑GGACTCCGTGCC‑GGTCCGCCGCCTG‑CGCGCCAGTTTTTCGCGTAAAGGAGCGGTGTGATGCa                                                                                                                                                                         <  2:840537/236‑1 (MQ=255)
                                                                       tAACCCACGTTAGGGACGCGTACTGGCGATGCTGCCAGCCATGCTGCTGTATCTACTTTTCTTCCTGATCCAGACCTCCCTGAAATCGAACGGCGGTAAAGGTAAGCTGGACCCGACGCTGTGGA‑TGTGGACCGTT‑AACCTGATTTATCTGGCTTTAGCGATTGTTCTCA‑A‑CCTTT‑G‑GGACACCGTGCC‑GGTCCGCCGCCTG‑CGCGCCAGTTTTTCGCGTAAAGGAGCGGTGTGATGCa                                                                                                                                                                         <  1:976461/239‑1 (MQ=255)
                                                                                 cAGGGACGCGTACTGTCGATGCTGCCAGCCATGCTGCTGTATCTACGTTTCTTCCGGATCCAGACCGCCCTGAAATCGAACGGCGGTAAAGGTAAGCTGGACCCGACGCTGTGGA‑TGTGGACCGTT‑AACCTGATTTATCGGGCTTTAGCGATTGTTCTCa                                                                                                                                                                                                                                                    <  1:577852/160‑1 (MQ=255)
                                                                                  aGGGACGCGTACTGCCGATGCTGCCAGCCATGCTGCTGTATCTACTTTTCTTCCTGATCCAGACCTCCCTGAAATCGAACGGCGGTAAAGGTAAGCTGGACCCGACGCTGTGGA‑TGTGGACCGTT‑AACCTGATTTATCTGGCTTTAGCGATTGTTCTCA‑A‑CCTTT‑G‑GGACACCGTGCC‑GGTCCGCCGCCTG‑CGCGCCAGTTTTTCGCGTAAAGGAGCGGTGTGATGCAACCTTTTGGCg                                                                                                                                                              <  1:106595/239‑1 (MQ=255)
                                                                                         cgTACTGTCGATGCTGCCAGCCATGCTGCTGTATCTACTTTTCTTCCTGATCCAGACCTCCCTGAAATCGAACGGCGGTAAAGGTAAGCTGGACCCGACGCTGTGGA‑TGTGGACCGTT‑AACCTGATTTATCTGGCTTTAGCGATTGTTCTCA‑A‑CCTTT‑G‑GGACACCGTGCC‑GGTCCGCCGCCTG‑CGCGCCAGTTTTTCTCGTAAAGGAGCGGTGTGATGCAACCTTTTTGCCGACTTg                                                                                                                                                        >  1:94774/1‑238 (MQ=255)
                                                                                             cTGTCGATGCCGCCAGCCATGCTGCTTTATCTACTTTTCTTCCTGATCCAGACCTCCCTGAAATCGAACGGCGGTAAAGGTAAGCTGGACCCGACGCTGTGGA‑TGTGGACCGTT‑AACCTGATTTATCTGGCTTTAGCGATTGTTCTCA‑A‑CCTTT‑G‑GGACACCGTGCC‑GGTCCGCCGCCTG‑CGCGCCAGTTTTTCGCGTAAAGGAGCGGTGTGATGCAACCTTTTGGCGTACTTGACCg                                                                                                                                                    <  1:285616/238‑1 (MQ=255)
                                                                                              tGTCGATGCTGCCAGCCATGCTGCTGTATCTACTTTTCTTCCTGATCCAGACCTCCCTGAAATCGAACGGCGGTAAAGGTAAGCTGGACCCGACGCTGTGGA‑TGTGGACCGTT‑AACCTGATTTATCTGGGTTTAGCGATTGGTCTCA‑A‑CATTT‑G‑GGAAACCGGGCC‑GGTCCGCCGCCTG‑CGCGCCAGGTTTTTGCGGAAAGGGGCGGGTGGAGGCAACCTTTTGGCGGACTTGACCGCt                                                                                                                                                  >  1:655017/1‑239 (MQ=255)
                                                                                                 gactgctgcCCGCCTTGCTTGTGTTTCTATTTTTTTGCCTGACCCAGCCCCCCCTGAAATCGAACGGCGGTAAAGGGAAGCTGGACCCGACGCTGTGGA‑TGTGGACCGTT‑AACCTGATTTATCTGGCTTTAGCGATTGTTCTCA‑A‑CCTTT‑G‑GGACACCGTGCC‑GGTCCGCCGCCTG‑CGCGCCAGTTTTTCGCGTAAAGGAGCGGTGTGATGCAACCTTTTGGCGTACTTGACCGCtata                                                                                                                                               <  2:285479/236‑1 (MQ=255)
                                                                                                  aaTGCTGCCAGCCATGCTGCTGTATCTACTTTTCTTCCTGATCCAGACCTCCCTGAAATCGAACGGCGGTAAAGGTAAGCTGGCCCCGACGCTGTGGA‑TGTGGACCGTT‑AACCTGATTTATCTGGCTTTAGCGATTGTTCTCA‑A‑CCTTT‑G‑GGACACCGTGCC‑GGTCCGCCGCCTG‑CGCGCCAGTTTTTCGCGTAAAGGAGCGGTGTGATGCAACCTTTTGGCGTACTTGACCGCTatat                                                                                                                                              <  1:650169/238‑1 (MQ=255)
                                                                                                   aTGCTGCCAGCCATGCTGCTGTATCTACTTTTCTTCCTGATCCAGACCTCCCTGAAATCGAACGGCGGTAAAGGTAAGCTGGACCCGACGCTGTGGA‑TGTGGACCGTT‑AACCTGATTTATCTGGCTTTAGCGATTTATCTCA‑A‑CCTTT‑G‑GGACACCGGGCC‑GGTCCGCCGCCTG‑CGCGCCAGGTTTTCGCGTAAAGGAGCGGGGTGATGCAACCTTTTGGCGGACTTGACCCCCATATc                                                                                                                                             >  1:272117/1‑239 (MQ=255)
                                                                                                       tgcCAGCCATGCTGCTGTATCTACTTTTCTTCCTGATCCAGACCTCCCTGAAATCGAACGGCGGTAAAGGTAAGCTGGACCCGACGCTGTGGA‑TGTGGACCGTT‑AACCTGATTTATCTGGCTTTAGCGATTGTTCTCA‑A‑CCTTT‑G‑GGACACCGTGCC‑GGTCCGCCGCCTG‑CGCGCCAGTTTTTCGCGTAAAGGAGCGGTGTGATGCAACCTTTTGGCGTACTTGACCGCTATATCGGTa                                                                                                                                         <  1:338020/239‑1 (MQ=255)
                                                                                                              caTGCTGCTGTATCTACTTTTCTTCCTTATCCAGACCTCCCTGAAATCGAACGGCGGTAAAGGTAAGCTGGACCCGACGCTGTGGA‑TGTGGACCGTT‑AACCTGATTTATCTGGCTTTAGCGATTGTTCTCA‑A‑CCTTT‑G‑GGACACCGTGCC‑GGTCCGCCGCCTG‑CGCGCCAGTTTTTCGCGTAAAGGAGCGGTGTGATGCAACCTTTTGGCGTACTTGACCGCTATATCGGTAAAACt                                                                                                                                    <  1:891759/237‑1 (MQ=255)
                                                                                                               attctgctgTATTTATTTTTCTCCCTGATCCAGACCTCCCTGAAATCGAACGGCGGTAAAGGTAAGCTGGACCCGACGCTGTGGA‑TGTGGACCGTT‑AACCTGATTTATCTGGCTTTAGCGATTGTTCTCA‑A‑CCTTT‑G‑GGACACCGTGCC‑GGTCCGCCGCCTG‑CGCGCCAGTTTTTCGCGTAAAGGAGCGGTGTGATGCAACCTTTTGGCGTACTTGACCGCTATATCGGTAAAACTAtt                                                                                                                                 <  1:1179951/236‑1 (MQ=255)
                                                                                                                 gctgctGTATCTACTTTTCTTCCTGATCCAGACCTCCCTGAAATCGAACGGCGGTAAAGGTAAGCTGGACCCGACGCTGTGGA‑TGTGGACCGTT‑AACCTGATTTATCTGGCTTTAGCGATTGTTCTCA‑A‑CCTTT‑G‑GGACACCGTGCC‑GGTCCGCCGCCTG‑CGCGCCAGTTTTTCGCGTAAAGGAGCGGGGTGATGCAACCTTTTGGCGTACTTTACCGCTATATCGGTAAAACTAttt                                                                                                                                >  1:398138/1‑238 (MQ=255)
                                                                                                                 gctgctGTATCTACTTTTCTTCCTGATCCAGACCTCCCTGAAATCGAACGGCGGTAAAGGTAAGCTGGACCCGACGCTGTGGA‑TGTGGACCGTT‑AACCTGATTTATCTGGCTTTAGCGATTGTTCTCA‑A‑CCTTT‑G‑GGACACCGTGCC‑GGTCCCCCGCCCG‑CGCGCCAGGTTTTCGCGTAAAGGAGCGGTGGGATTCAACCTTTTGGCGGACTTGACCGCTATATCGGTAAAACTAttt                                                                                                                                >  1:332615/1‑238 (MQ=255)
                                                                                                                    gctgTAGCTACTTTGCTTCCTTGTCCAGGCCTCCCTGAAATCGAACGGCGGTAAAGGTAAGCTGGACCCGACGCTGTGGA‑TGTGGACCGTT‑AACCTGATTTATCTGGCTTTAGCGATTGTTCTCA‑A‑CCTTT‑G‑GGACACCGTGCC‑GGTCCGCCGCCTG‑CGCGCCAGTTTTTCGCGTAAAGGAGCGGTGTGATGCAACCTTTTGGCGTACTTGACCGCTATATCGGTAAAACTATTTTcac                                                                                                                            <  1:1123465/239‑1 (MQ=255)
                                                                                                                      tgTATCTACTTTTCTTCCTGATCAAGACCTCCCTGAAATCGAACGGCGGTAAAGGTAAGCTGGACCCGACGCTGTGGA‑TGTGGACCGTT‑AACCTGATTTATCTGGCTTTAGCGATTGTTCTCA‑A‑CCTTT‑G‑GGaca                                                                                                                                                                                                                                    <  1:482418/135‑1 (MQ=255)
                                                                                                                        tATCTACTTTTCTTCCTGATCCAGACCTCCCTGAAATCGAACGGCGGTAAAGGTAAGCTGGACCCGACGCTGTGGA‑TGTGGACCGTT‑AACCTGATTTATCTGGCTTTAGCGATTGTTCTCA‑A‑CCTTT‑G‑GGACACCGTGCC‑GGTCCGCCGCCTG‑CGCGCCAGTTTTTCGCGTAAAGGAGCGGTGTGATGCAACCTTTTGGCGTACTTGACCGCTATATCGGTAAAACTATTTTcac                                                                                                                            <  1:774166/235‑1 (MQ=255)
                                                                                                                          tCTACTTTTCTTCCTGATCCAGACCTCCCTGAAATCGAACGGCGGTAAAGGTAAGCTGGACCCGACGCTGTGGA‑TGTGGACCGTT‑AACCTGATTTATCTGGCTTTAGCGATTGTTCTCC‑A‑CCTTT‑G‑GGACACCGTTCC‑GGTCCGCCGCCTG‑CCGGCCAGTTTTTCGCGTAAAGGAGCGGGGGGATTGAACCTTTTGTCGGACTTTACCGCTATATCGGTAAAACTATTTTtaccacac                                                                                                                       >  1:243856/1‑236 (MQ=255)
                                                                                                                          tCTACTTTTATTCCTGATCCAGCCCCCCCTGAAAGCGAACGGCGGTAAAGGTAAGCTGGACCCGACGCTGTGGA‑TGTGGACCGTT‑AACCTGATTTATCTGGCTTTAGCGATTGTTCTCA‑A‑CCTTT‑G‑GGACACCGTGCC‑GGTCCGCCGCCTG‑CGCGCCAGTTTTTCGCGTAAAGGAGCGGTGTGATGCAACCTTTTGGCGTACTTGACCGCTATATCGGTAAAACTATTTTCACCACcat                                                                                                                      <  1:528263/239‑1 (MQ=255)
                                                                                                                               ttttCTTCCTGATCCAGACCTCCCTGAAATCGAACGGCGGTAAAGGTAAGCTGGACCCGACGCTGTGGA‑TGTGGACCGTT‑AAACTGATTTATCTGGCTTTAGCGATTGTTCTCA‑A‑CCTTT‑G‑GGACACCGTGCC‑GGTCCGCCGCCTG‑CCCGCCAGTTTTTCGCGTAAAGGAGCGGGGTGATGCAACCTTTTGGCGGACTTGACCGCTATATCGGTAAAACTATTTTCACCACCATCatga                                                                                                                 >  1:1114008/1‑239 (MQ=255)
                                                                                                                                  tcttcCTGATCCAGCCCTCCCTGAAATCGACCGGCGGTAAAGGTAAGCTGGACCCGACGCTGTGGA‑TGTGGACCGTT‑AACCTGATTTATCTGGCTTTAGCGATTGTTCTCA‑A‑CCTTT‑G‑GGACACCGTGCC‑GGTCCGCCGCCTG‑CGCGCCAGTTTTTCGCGTAAAGGAGCGGTGTGATGCAACCTTTTGGCGTACTTGACCGCTATATCGGTAAAACTATTTTCACCACCATCAtgatga                                                                                                              <  1:123643/239‑1 (MQ=255)
                                                                                                                                  tcttcCTGATCCAGACCTCCCTGAAATCGAACGGCGGTAAAGGTAAGCTGGACCCGACCCTCTGGA‑TTGGGACCGTT‑AACCTGATTTTTCTGGGTTTAGGCAGTGGTCTCA‑A‑CCCTT‑G‑GGGCACAGTGCC‑CGGACGCCGCCTG‑CGCGCCCATTTTTTGCCTAACAGCACGGAGGGTGGGCACCTATTGGCGTTATTTTCCCCTCTACTGGGAAAAATATTTTCAccaccacaacagtta                                                                                                              >  2:569273/1‑230 (MQ=255)
                                                                                                                                   cttcCTGATCCAGACCTCCCTGAAATCGAACGGGGGTAAAGGGAAGCTGGACCCGACGCTGTGGA‑TGTGGACCGTT‑AACCTGATTTATCTGGCTTTAGCGATTGTTCTCA‑A‑CCGTT‑G‑GGACACCGTGCC‑GGTCCGCCGCCTG‑CGCGCCAGTTTTTCGCGTAAAGGAGCGGTGTGATGCAACCTTTTGGCGTACTTGACCGCTATATCGGTAAAACTATTTTCACCACCATCATGATGac                                                                                                             <  1:82712/239‑1 (MQ=255)
                                                                                                                                    ttccttgcccAGACCCCCCTGAAATCGAACGGCGGTAAAGGTAAGCTGGACCCGGCGCTGTGGA‑TGGGGACCGTT‑AACCTGATTTATCTGGCTTTAGCGATTGTTCTCA‑A‑CCTTT‑G‑GGACACCGTGCC‑GGTCCGCCGCCTG‑CGCGCCAGTTTTTCGCGTAAAGGAGCGGTGTGATGCAACCTTTTGGCGTACTTGACCGCTATATCGGTAAAACTATTTTCACCACCATCATGATGaca                                                                                                            <  2:1271427/231‑1 (MQ=255)
                                                                                                                                    ttcCTGTCCCGGGCCCCCCTGAAATCGAACGGCGGTAAGGGTAAGGTGGACCCGACGCTGGGGA‑TGGGGACCGTT‑AACCTGATTTAGCTGGCTTTAGCGATTGTTCTCA‑A‑CCTTT‑G‑GGACACCGTGCC‑GGTCCGCCGCCTG‑CGCGCCAGTTTTTCGCGTAAAGGAGCGGTGTGATGCAACCTTTTGGCGTACTTGACCGCTATATCGGTAAAACTATTTTCACCACCATCATGATGaca                                                                                                            <  2:332615/239‑1 (MQ=255)
                                                                                                                                    ttcCTGATCCAGGCCTCCCTGAAATCGAACGGCGGTAAAGGTAAGCTGGACCCGACGCTGTGGA‑TGTGGACCGTT‑AACCTGATTTATCTGGCTTTAGCGATTGTTCTCA‑A‑CCTTT‑G‑GGACACCGTGCC‑GGTCCGCCGCCTG‑CGCGCCAGTTTTTCGCGTAAAGGAGCGGTGTGATGCAACCTTTTGGCGTACTTGACCGCTATATCGGTAAAACTATTTTCACCACCATCATGATGaca                                                                                                            <  1:498606/239‑1 (MQ=255)
                                                                                                                                    ttcCTGATCCAGACCTCCCTGAAATCGAACGGCGGTAAAGGTAAGCTGGTCCCGACCCTGGTGC‑TTTGGGACGTT‑AACCTGATTTATCTGGCTTTAACGATTGTTCTCA‑G‑CCTTT‑T‑GGACACCGTGCC‑GGTCCGCCGCCCG‑CGGCCCAGGTTTTTGCGTAAAGGGGCGGGGGGGTTCCACCTTTTGGCGTGTCTGACCGGTGTATTGGTAAAAAAATTTTTaccacccaccaaatgaa                                                                                                             >  2:916921/1‑227 (MQ=255)
                                                                                                                                    ttcCTGATCCAGACCTCCCTGAAATCGAACGGCGGTAAAGGTAAGCTGGACCCGACGCTGTGGA‑TGTGGACCGTT‑AACCTGATTTATCTGGCTTTAGCGATTGTTCTCA‑A‑CCTTT‑G‑GGACACCGTGCC‑GGTCCGCCGCCTG‑CGCGCCAGTTTTTCGCGTAAAGGAGCGGTGTGATGCAACCTTTTGGCGTACTTGACCGCTATATCGGTAAAACTATTTTCACCACCATCATGATGaca                                                                                                            <  1:747920/239‑1 (MQ=255)
                                                                                                                                    ttcCTGATCCAGACCTCCCTGAAATCGAACGGCGGTAAAGGTAAGCTGGACCCGACGCTGTGGA‑TGTGGACCGTT‑AACCTGATTTATCTGGCTTTAGCGATTGTTCTCA‑A‑CCTTT‑G‑GGACACCGTGCC‑GGTCCGCCGCCTG‑CGCGCCAGTTTTTCGCGTAAAGGAGCGGTGTGATGCAACCTTTTGGCGTACTTGACCGCTATATCGGTAAAACTATTTTCACCACCATCATGATGaca                                                                                                            <  1:188293/239‑1 (MQ=255)
                                                                                                                                    tgccTGGTCCAGACCTCCCTGAAATCGAACGGTGGTAAAGGTAAGCGGGACCGGACGCTGTGGA‑TGTGGACCGTT‑AACCTGATTTATCTGGCTTTAGCGATTGTTCTCA‑A‑CCTTT‑G‑GGACCCCGTGCC‑GGTCCGCCGCCTG‑CGCGCCAGTTTTTCGCGTAAAGGAGCGGTGTGATGCAACCTTTTGGCGTACTTGACCGCTATATCGGTAAAACTATTTTCACCACCATCATGATGaca                                                                                                            <  2:94774/237‑1 (MQ=255)
                                                                                                                                         gacccAGGCCTCCCTGAAATCGAACGGCGGTAAAGGTAAGCTGGACCCGACGCTGTGGA‑TGTGGACCGTT‑AACCTGATTTATCTGGCTTTAGCGATTGTTCTCA‑A‑CCTTT‑G‑GGACACCGTGCC‑GGTCCGCCGCCTG‑CGCGCCAGTTTTTCGCGTAAAGGAGCGGTGTGATGCAACCTTTTGGCGTACTTGACCGCTATATCGGTAAAACTATTTTCACCACCATCATGATGACACTGtt                                                                                                       <  1:359968/236‑1 (MQ=255)
                                                                                                                                         gATCCAGACCTCCCTGAAATCGAACGGCGGTAAAGGTAAGCTGGACCCGACGCTGTGGA‑TGTGGACCGTT‑AACCTGATTTATCTGGCTTTAGCGATTGTTCTCA‑A‑CCTTT‑G‑GGACACCGTGCC‑GGTCCGCCGCCTG‑CGCGCCAGTTTTTCGCGTAAAGGAGCGGTGTGATGCAACCTTTTGGCGTACTTGACCGCTATATCGGTAAAACTATTTTCACCACCATCATGATGACACTGtt                                                                                                       <  1:1198632/239‑1 (MQ=255)
                                                                                                                                           ctcaccccccccTGAAATGTAACGGTGGTAAGGGTAAGCTGGCCCCGACGCTGTGGA‑TGTGGACCGTT‑AACCTGATTTATCTGGCTTTAGCGATTGTTCTCA‑A‑CCTTT‑G‑GGACACCGTGCC‑GGTCCGCCGCCTG‑CGCGCCAGTTTTTCGCGTAAAGGAGCGGTGTGATGCAACCTTTTGGCGTACTTGACCGCTATATCGGTAAAACTATTTTCACCACCATCATGATGACACTGTTCa                                                                                                     <  2:559794/230‑1 (MQ=255)
                                                                                                                                                     ccTGAAATCGAACGGCGGAAAAGGCTAACCGGAACCGACCCTGTGGA‑TGTGGACCGTT‑TACCTGATTTATCTGGCTTTAGCGATTGTTCTCA‑A‑CCTTT‑G‑GGACACCGTGCC‑GGTCCGCCGCCTG‑GGCGCCCGTTTTTCGCGTAAAGGGGCGGTGTGATg                                                                                                                                                                           >  1:1306920/1‑159 (MQ=255)
                                                                                                                                                          aaTCGAACGGGGGTAAAGGTAAGCTGGACCCGACGCTGTGGA‑TGTGGACCGTT‑AACCTGATTTATCTGGCTTTAGCGATTGTTCTCA‑A‑CCTTT‑G‑GGACACCGTGCC‑GGTCCGCCGCCTG‑CGCGCCAGTTTTTCGCGTAAAGGAGCGGTGTGATGCAACCTTTTGGCGTACTTGACCGCTATATCGGTAAAACTATTTTCACCACCATCATGATGACACTGTTCATGCTGGTGTCGCTg                                                                                       <  1:205686/238‑1 (MQ=255)
                                                                                                                                                             cGAACGGCGGTAAAGGTAAGCTGGACCCGACGCTGTGGA‑TGTGGACCGTT‑AACCTGATTTATCTGGCTTTAGCGATTGTTCTCA‑A‑CCTTT‑G‑GGACACCGTGCC‑GGTCCGCCGCCTG‑CGCGCCAGTTTTTCGCGTAAAGGAGCGGTGTGATGCAACCTTTTGGCGTACTTGACCGCTATATCGGTAAAACTATTTTCACCACCATCATGATGACACTGTTCATGCTGGTGTCGCTGTCgg                                                                                   <  1:95660/239‑1 (MQ=255)
                                                                                                                                                               aaCGGCGGTAAAGGTAAGCTGGACCCGACGCTGTGGA‑TGTGGACCGTT‑AACCTGATTTATCTGGCTTTAGCGATTGTTCTCA‑A‑CCTTT‑G‑GGACACCGTGCC‑GGTCCGCCGCCTG‑CGCGCCAGTTTTTCGCGTAAAGGAGGGGGGTGATGCAACCTTTTGGCGTACTTGACCGCTATATCGGGAAAACTATTTTTACCACCATCCAGATGAAACCGTTCATGCTGGGGTCGCTGTCGGGc                                                                                 >  1:868700/1‑239 (MQ=255)
                                                                                                                                                                      gTAAAGGTAAGCGGGACCCGACGCTGTGGA‑TGTGGACCGTT‑AACCTGATTTATCTGGCTTTAGCGATTGTTCTCA‑A‑CCTTT‑G‑GGACACCGTGCC‑GGTCCGCCGCCTG‑CGCGCCAGTTTTTCGCGTAAAGGAGCGGTGTGATGCAACCTTTTGGCGTACTTGACCGCTATATCGGTAAAACTATTTTCACCACCATCATGATGACACTGTTCATGCTGGTGTCGCTGTCGGGCATTATc                                                                           <  1:198063/238‑1 (MQ=255)
                                                                                                                                                                               aGCTGGACCCGACGCTGTGGA‑TGTGGACCGTT‑AACCTGATTTATCTGGCTTTAGCGATTGTTCTCA‑A‑CCTTT‑G‑GGACACCGTGCC‑GGTCCGCCGCCTG‑CGCGCCAGTTTTTCGCGTAAAGGAGCGGTGTGATGCAACCTTTTGGCGTACTTGACCGCTATATCGGTAAAACTATTTTCACCACCATCatg                                                                                                                  >  1:806146/1‑190 (MQ=255)
                                                                                                                                                                                gCTGGACCCGACGCTGTGGA‑TGTGGACCGTT‑AACCTGATTTATCTGGCTTTAGCGATTGTTCTCA‑A‑CCTTT‑G‑GGACACCGTGCC‑GGTCCGCCGCCTG‑CGCGCCAGTTTTTCGCGTAAAGGAGCGGGGTGATGCAACCTTTTGGCGTACTTGACCGCTATATCGGTAAAACTATTTTCACCACCATCATGATGACACTGTTAATGCTGGTGTCGCTGTCGGGAATTATCAAGTTTGTCGa                                                                >  1:515194/1‑239 (MQ=255)
                                                                                                                                                                                      cccGACGCTGTGGA‑TGTGGACCGTT‑AACCTGATTTATCTGGCTTTAGCGATTGTTCTCA‑A‑CCTTT‑G‑GGACACCGTGCC‑GGTCCGCCGCCTG‑CGCGCCAGTTTTTCGCGTAAAGGAGCGGTGTGATGCACCCTTTTGGCGTACTTGACCGCTATATCGGTAAAACTATTTTCGCCACCATACTGATGACACAGCTCATGCTGGGTTCGCTTTTCGGCATTACCAAGTTTGTCGA‑CCAACt                                                         >  2:568099/1‑239 (MQ=255)
                                                                                                                                                                                         gggtctttggt‑tgtggaCCGTT‑AACCTGTTTTTTCTGGCTTTAGCGATTGTTCTCA‑A‑CCTTT‑G‑GGACACCGGGCC‑GGGCCGCCGCCTG‑CGCGCCAGTTTTTCGCGTAAAGGAGCGGTGTGATGCAACCTTTTGGCGTACTTGACCGCTATATCGGTAAAACTATTTTCACCACCATCATGATGACACTGTTCATGCTGGTGTCGCTGTCGGGCATTATCAAGTTTGTCGA‑TCAGCTGaa                                                      <  2:23485/232‑1 (MQ=255)
                                                                                                                                                                                         gACGCTGTGGA‑TGTGGACCGTT‑AACCTGATTTATCTGGCTTTAGCGATTGTTCTCA‑A‑CCTTT‑G‑GGACACCGTGCC‑GGTCCGCCGCCTG‑CGCGCCAGTTTTTCGCGTAAAGGAGCGGTGTGATGCAACCTTTTGGCGTACTTGACCGCTATATCGGTAAAACTATTTTCACCACCATCATGATGACACTGTTCATGCTGGTGTCGCTGTCGGGCATTATCAAGTTTGTCGA‑TCAGCTGaa                                                      >  2:84796/1‑239 (MQ=255)
                                                                                                                                                                                              tgggga‑tgtggaCCGTT‑AACCTGATTTATCTGGCTTTAGCGATTGTTCTCA‑A‑CCTTT‑G‑GGACACCGTGCC‑GGTCCGCCGCCTG‑CGCGCCAGTTTTTCGCGTAAAGGAGCGGTGTGATGCAACCTTTTGGCGTACTTGACCGCTATATCGGTAAAACTATTTTCACCACCATCATGATGACACTGTTCATGCTGGTGTCGCTGTCGGGCATTATCAAGTTTGTCGA‑TCAGCTGAAAAAAg                                                 <  1:702656/236‑1 (MQ=255)
                                                                                                                                                                                                tgga‑tgtggaCCGTT‑AACCTGATTTATCTGGCTTTAGCGATTGTTCTCA‑A‑CCTTT‑G‑GGACACCGTGCC‑GGTCCGCCGCCTG‑CGCGCCAGTTTTTCGCGTAAAGGAGCGGTGTGATGCAACCTTTTGGCGTACTTGACCGCTATATCGGTAAAACTATTTTCACCACCATCATGATGACACTGTTCATGCTGGTGTCGCTGTCGGGCATTATCACGTTTGTCGA‑TCAGCTGAAACAAgac                                               >  1:205981/1‑237 (MQ=255)
                                                                                                                                                                                                       tggaCCGTT‑ATCCTGTTTTATTTGCCTTTGGGGATTGTTTGCA‑A‑CCTTT‑G‑GTACCCCGTGCC‑GGCCCGGCGTCTG‑CGCGCCAGTTTTTCGCGTAAAGGGGCGGTGTGAGGCACCCTTTTGGCGTACGTGACCGCTATATCGGTAAAACTATTTTCACCACCATCATGATGACACTGTTCATGCTGGTGTCGCTGTCGGGCATTATCAAGTTTGTCGA‑TCAGCTGAAAAAAGCCGGGCAg                                         <  2:1250691/239‑1 (MQ=255)
                                                                                                                                                                                                         gaCCGTT‑AACCTGATTTATCTGGCTTTAGCGATTGTTCTCA‑A‑CCTTT‑G‑GGACACCGTGCC‑GGTCCGCCGCCTG‑CGCGCCAGTTTTTCGCGTAAAGGAGCGGTGTGATGCAACCTTTTGGCGTACTTGACCGCTATATCGGTACAACTATTTTCACCACCATCATGATGACACTGTTCATGCTGGGTTTGCTGTCGGGCATTATCAAGTTTTTGGA‑CAAGCTGAAAAAAGCCggggcggg                                       >  2:660178/1‑234 (MQ=255)
                                                                                                                                                                                                         gaCCGTT‑AACCTGATTTATCTGGCTTTAGCGATTGTTCTCA‑A‑CCTTT‑G‑GGACACCGTGCC‑GGTCCGCCGCCTG‑CGCGCCAGTTTTTCGCGTAAAGGAGCGGTGTGATGCAACCTTTTGGCGTACTTGACCGCTATATCGGTAAAACTATTTTCACCACCATCATGATGACACTGTTCATGCTGGTGTCGCTGTCGGGCATTATCAAGTTTGTCGA‑TCAGCTGAAAAAAGCCGGGCAggg                                       >  1:1161746/1‑239 (MQ=255)
                                                                                                                                                                                                           ccGTT‑AACCTGATTTATCTGGCTTTAGCGATTGTTCTCA‑A‑CCTTT‑G‑GGACACCGTGCC‑GGTCCGCCGCCTG‑CGCGCCAGTTTTTCGCGTAAAGGAGCGGTGTGATGCAACCTTTTGCCGTCCTTGACCGCTCTATCGGTAAAACTATTTTCACCACCATCCTGTTGAAACTGTTCATGCTGGTGGCGCTGTCGGGCATTATCAAGTTTTCCGA‑TCAGCCTGACAAACCCGGGCGggggg                                     >  2:990946/1‑238 (MQ=255)
                                                                                                                                                                                                              tt‑AACCTGATTTATCTGGCTTTAGCGATTGTTCTCA‑A‑CCTTT‑G‑GGACACCGTGCC‑GGTCCGCCGCCTG‑CGCGCCAGTTTTTCGAGTAAAGGAGCGGTGGGATGCAACCTTTTGGCCTACTTGACCGCTAGATCGGTAAAACAATGTGCACCACCATCATGATGCAACTGTTCATGCGGGGGTCGCGTTCGGGCCTTATCAAGTTT‑TCAACTCAACTGGAAAAATACGGGCAGGGGGGtt                                  >  2:422974/1‑239 (MQ=255)
                                                                                                                                                                                                                  aCCTGATTTATCTGGCTTTAGCGATTGTTCTCA‑A‑CCTTT‑G‑GGACACCGTGCC‑GGTCCGCCGCCTG‑CGCGCCAGTTTTTCGCGTAAAGGAGCGGTGTGATGCAACCTTTTGGCGTACTTGACCGCTATATCGGTAAAACTATTTTCACCACCATCATGATGACACTGTTCATGCTGGTGTCGCTTGTGGGCATTATCAAGTTTGTCGA‑TCATCTGAAAAAAGCGGGGCAGGGGAggtcaa                               >  2:134164/1‑234 (MQ=255)
                                                                                                                                                                                                                  aCCTGATTTATCTGGCTTTAGCGATTGTTCTCA‑A‑CCTTT‑G‑GGACACCGTGCC‑GGTCCGCCGCCTG‑CGCGCCAGTTTTTCGCGTAAAGGAGCGGCGTGATGAAACCTTTGGGCGTACTTGCCCGCTATATCGGTAAAACTATTTTCACCACCACCATGATGACACTGTTCATGTTGGTTTCGCTTCCGGGCATTATCAAGTTTG‑CGAGTCAGCTGCAAAAAACCGGGAGGGGGGGTAaca                               >  2:1033138/1‑238 (MQ=255)
                                                                                                                                                                                                                    cTGATTTATCTGGCTTTAGCGATTGTTCTCA‑A‑CCTTT‑G‑GGACACCGTGCC‑GGTCCGCCGCCTG‑CGCGCCAGTTTTTCGCGTAAAGGAGCGGTGTGATGCAACCTTTTGGCGTACTTGACCGCTATATCGGTAAAACTATTTTCACCACCATCATGATGACACTGTTCATGCTGGTGTCGCTGTCGGGCATTATCAAGTTTGTCGA‑TCAGCTGAAAAAAGCCGGGCAGGGGAGTTacga                              >  1:271233/1‑238 (MQ=255)
                                                                                                                                                                                                                       aTTTATCTGGCTTTAGCGATTGTTCTCA‑A‑CCTTT‑G‑GGACACCGTGCC‑GGTCCGCCGCCTG‑CGCGCCAGTTTTTCGCGTAAAGGAGCGGTGTGATGCAACCTTTTGGCGTACTTGACCGCTATATCGGTAAAACTATTTTCACCACCATCATGATGACACTGTTCATGCTGGTGTCGCTGTCGGGCATTATCAAGTTTGTCGA‑TCAGCTGAAAAAAGCCGGGCAGGGGAGTTACGAcgcg                          >  1:59883/1‑239 (MQ=255)
                                                                                                                                                                                                                       aTTTATCTGGCTTTAGCGATTGTTCTCA‑A‑CCTTT‑G‑GGACACCGTGCC‑GGTCCGCCGCCTG‑CGCGCCAGTTTTTCGCGTAAAGGAGCGGTGTGATGCAACCTTTTGGCGTACTTGACCGCTATATCGGTAAAACTATTTTCACCACCATCATGATGACACTGTTCATGCTGGGGTCGTTGTCGGGCATTATCCAGTTTGTCGA‑TCCACTGAAAAAAACCGGGGAGGGGAGGTACGAcgcg                          >  2:74790/1‑239 (MQ=255)
                                                                                                                                                                                                                       aTTTATCTGGCTTTAGCGATTGTTCTCA‑A‑CCTTT‑G‑GGACACCGTGCC‑GGTCCGCCGCCTG‑CGCGCCAGTTTTTCGCGTAAAGGAGCGGAGTGATGCAACCTTTTGGCGTACTTGACCGCTATATCGGTAAAACTATTTTCACCACCATCATGATGACACTGTTCATGCTGGTGTCGCTGTCGGGCATTATCAAGTTTGTCGA‑TCAGCTGAAAAAAGCCGGGCAGGGGAGTTACGAcgcg                          >  1:709191/1‑239 (MQ=255)
                                                                                                                                                                                                                            tCTGGTTTTAGCGATTGTTCTCA‑A‑CCTTT‑G‑GGACACCGTGCC‑GGTCCGCCGCCTG‑CGCGCCAGTTTTTCGCGTAAAGGAGCGGTGTGATGCAACCTTTTGGCGTACTTGACCGCTATATCGGTAAAACTATTTTCACCACCATCATGATGACACTGTTCATGCTGGTGTCGCTGTCGGGCATTATCAAGTTTGTCGA‑TCAGCTGaa                                                      <  1:1054451/206‑1 (MQ=255)
                                                                                                                                                                                                                              tGGCTTTAGTCATTGTTCTCA‑A‑CCTTT‑G‑GGAACCGGTGGC‑GGTCCGCCGCCTG‑CGGGCCGTTTTTTCGGGTAAAGGAGCGGTGTGATGCAACCTTTGGGCGTACTTGACCGCTATATCGGTAAAACTATTTTCACCACCATCATGATGACACTGTTCATGCTGGTGTCGCTGTCGGGCATTATCAAGTTTGTCGA‑TCAGCTGAAAAAAGCCGGGCAGGGGAGTTACGACGCGTTAGgcg                   <  2:911285/239‑1 (MQ=255)
                                                                                                                                                                                                                              tGGCTTTAGGGATTGTTCTCA‑A‑CCTTT‑G‑GGACACCGTGCC‑GGTCCGCCGCCTG‑CGCGCCAGTTTTTCGCGTAAAGGAGCGGTGTGATGCAACCTTTTGGCGTACTTGACCGCTATATCGGTAAAACTATTTTCACCACCATCATGATGACACTGTTCATGCTGGTGTCGCTGTCGGGCATTATCAAGTTTGTCGA‑TCAGCTGAAAAAAGCCGGGCAGGGGAGTTACGACGCGTTAGgcg                   <  1:27597/239‑1 (MQ=255)
                                                                                                                                                                                                                              tGGCTTTAGCGATTGTTCTCA‑A‑CCTTT‑G‑GGACACCGTGCC‑GGTCCGCCGCCTG‑CGCGCCAGTTTTTCGCGTAAAGGAGCGGTGTGATGCAACCTTTTGGCGTACTTGACCGCTATATCGGTAAAACTATTTTCACCACCATCATGATGACACTGTTCATGCTGGTGTCGCTGTCGGGCATTATCAAGTTTGTCGA‑TCAGCTGAAAAAAGCCGGGCAGGGGAGTTACGACGCGTTAGgcg                   <  1:331591/239‑1 (MQ=255)
                                                                                                                                                                                                                                gCTTTAGCGCTTTTTTTTA‑T‑CCTTT‑G‑GGACTCCGGGCC‑GGTCCGCCGCCTG‑CTCGCCAGTTTTTCGCGTAAAGGCGCGGTGTGATGCAACCTTTTGGCGTACTTGACCGCTATATCGGTAAAACTATTTTCACCACCATCATGATGACACTGTTCATGCTGGTGTCGCTGTCGGGCATTATCAAGTTTGTCGA‑TCAGCTGAAAAAAGCCGGGCAGGGGAGTTACGACGCGTTAGGCGCa                 <  2:1224796/239‑1 (MQ=255)
                                                                                                                                                                                                                                 gtttAGCCTTTTTTCTCA‑A‑CCTTT‑G‑GGACCCCGGGCC‑GGGCCGGCTCCTT‑GGCGGCAGTTTTGCGCGTAAAGGGGCGGTGTGATGCACCCTTTTGGCGTTCTGGACCGCTATATCGGTAAAACTATTTCCACCACCATCATGATGACACTGTTCATGCTGGTGTCGCTGTCGGGCATTATCAAGTTTGTCGA‑TCAGCTGAAAAAAGCCGGGCAGGGGAGTTACGACGCGTTAGGCGCa                 <  2:655017/237‑1 (MQ=255)
                                                                                                                                                                                                                                 cTTTAGCGATTGTTCTCA‑A‑CCTTT‑G‑GGACCCCGTGCC‑GGTCCGCCGCCTG‑CGCGCCAGTTTTTCGCGTAAAGGAGCGGTGTGATGCAACCTTTTGGCGTACTTGACCGCTATATCGGTAAAACTATTTTCACCACCATCATGATGACACTGTTCATGCTGGTGTCGCTGTCGGGCATTATCAAGTTTGTCGA‑TCAGCTGAAAAAAGCCGGGCAGGGGAGTTACGACGCGTTAGGCGCa                 <  1:879317/238‑1 (MQ=255)
                                                                                                                                                                                                                                 cTTTAGCGATTGTTCTCA‑A‑CCTTT‑G‑GGACACCGTGCC‑GGTCCGCCGCCTG‑CGCGCCAGTTTTTCGCGTAAAGGAGCGGTGTGATGCCACCTTTTGGCCTACTTGACCGCTATATCGGTAAAACTATTTTCACCACCATCATGATGACACTGTTCCTGCTGGTGTCGCTTTCGGGCATTATCAAGTTTGTCCA‑TCCGCTGAAAAAAGCCGGGCAGGGGGGTTACACCACGTTAGgcgccg                >  2:536647/1‑237 (MQ=255)
                                                                                                                                                                                                                                 cTTTAGCGATTGTTCTCA‑A‑CCTTT‑G‑GGACACCGTGCC‑GGTCCGCCGCCTG‑CGCGCCAGTTTTTCGCGTAAAGGAGCGGTGTGATGCAACCTTTTGGCGTACTTGACCGCTATATCGGTAAAACTATTTTCACCACCTTCATGATGACACTCTTCATGCTGGTGTAGCTGTCGTGCATTATCAAGTTTGTCGC‑TAAGCTGAAAAAAGCCGGGCAGGGGAGTTACGACGCGTTAGGCGCAg                >  2:1073587/1‑239 (MQ=255)
                                                                                                                                                                                                                                 cTTTAGCGATTGTTCTCA‑A‑CCTTT‑G‑GGACACCGTGCC‑GGTCCGCCGCCTG‑CGCGCCAGTTTTTCGCGTAAAGGAGCGGTGTGATGCAACCTTTTGGCGTACTTGACCGCTATATCGGTAAAACTATTTTCACCACCATCATGATGACACTGTTCATGCTGGTGTCGCTGTCGGGCATTATCAAGTTTGTCGA‑TCAGCTGAAAAAAGCCGGGCAGGGGAGTTACGACGCGTTAGGCGCa                 <  1:916921/238‑1 (MQ=255)
                                                                                                                                                                                                                                  tttAGGGTTTGTTCTCA‑T‑CTTTG‑G‑GGGCACCGTGCC‑GGTCCGCCGCCTG‑CGGGCAAGTTTTTCGCGTAAAGGAGCGGTTGAATGCAACCTTTTGGCGTCCTTGACCGCTATATCGGTAAATCTATTTTCACCACCATCATGATGACACTGTTCATGCTGGTGTCGCTGTCGGGCATTATCAAGTTTGTCGA‑TCAGCTGAAAAAAGCCGGGCAGGGGAGTTACGACGCGTTAGGCGCAgg               <  2:952517/239‑1 (MQ=255)
                                                                                                                                                                                                                                     agtcgttGTTTTCA‑A‑CCTTT‑G‑GGAACCCGTGGC‑GGGCCGCCGCCGT‑CGCTCCCGTTTTTCGCGTAAAGGAGCGGTGTGATGCAACCCTTTGGCGTACTTGACCGCTATATCGGTAAAACTATTTGCACCACCATCATGATGACACTGTTCATGCTGGTGTCGCTGTCGGGCATTATCAAGTTTGTCGA‑TCAGCTGAAAAAAGCCGGGCAGGGGAGTTACGACGCGTTAGGCGCAGGAAt            <  2:272117/234‑1 (MQ=255)
                                                                                                                                                                                                                                     aGCGTTTGTTCCTA‑A‑CCTTT‑G‑GGACACCGTGCC‑GGTCCGCCGCCTG‑CCCGCCAGTTTTTCGCGTAAAGGAGCGGTGTGATGCAACCTTTTGGCGTACTTGACCGCTATATCGGTAAAACTATTTTCACCACCATCATGATGACCCTGTTCATGCTGGTGTCGCTGTCGGGCATTATCAAGTTTGTCGA‑TCAGCTGAAAAAAGCCGGGCAGGGGAGTTACGACGCGTTAGGCGCAGGAAt            <  1:885146/239‑1 (MQ=255)
                                                                                                                                                                                                                                     aGCGATTGTTCTCA‑A‑CCTTT‑G‑GGACACCGTGCC‑GGTCCGCCGCCTG‑CGCGCCAGTTTTTCGCGTAAAGGAGCGGTGTGATGCAACCTTTTGGCGTACTTGACCGCTATATCGGTAAAACTATTTTCACCACCATCATGATGACACTGTTCATGCTGGTGTCGCTGTCGGGCATTATCAAGTTTTTCGA‑TCAGCCGAAAAAAGCCGGGCAGGGGGATGACGACGCGTTAGGGGCAGGaag            >  2:354945/1‑238 (MQ=255)
                                                                                                                                                                                                                                        gATTGTTCCCA‑A‑CCTTG‑G‑GGACCCCGTGCC‑GGTCCGGCGCCTG‑CGCGCCAGGTTTTCGCGTAAAGGAGCGGTGTGATGCAACCTTTTGGCGTACTTGACCGCTATATCGGTAAAACTATTTTCACCACCATCATGATGACACTGTTCATGCTGGTGTCGCTGTCGGGCATTATCAAGTTTGTCGA‑TCAGCTGAAAAAAGCCGGGCAGGGGAGTTACGACGCGTTAGGCGCAGGAATGt          <  1:660178/238‑1 (MQ=255)
                                                                                                                                                                                                                                           tGTTCTCA‑A‑CCTTT‑G‑GGACACCGTGCC‑GGTCCGCCGCCTG‑CGCGCCAGTTTTTCGCGTAAAGGAGCGGTGTGATGCAACCTTTTGGCGTACTTGACCGCTATATCGGTAAAACTATTTTCACCACCATCATGATGACACTGTTCATGCTGGTGTCGCTTGCGGGCATTATCAAGTTTGTCGA‑TCAGCTGAAAAAAGCCGGGCAGGGGGGTTACGACCGGTTAGGCGCAGGaaggataa       >  1:121773/1‑232 (MQ=255)
                                                                                                                                                                                                                                               |                                                                                                                                                                                                                                                     
CTGAACTGGCGTATCACGTTGGTATTCACCGTGTTTATGATGGCACTTATGGTCGTACCGCTGAGCGTGGTTAACCCACGTCAGGGACGCGTACTGTCGATGCTGCCAGCCATGCTGCTGTATCTACTTTTCTTCCTGATCCAGACCTCCCTGAAATCGAACGGCGGTAAAGGTAAGCTGGACCCGACGCTGTGGA‑TGTGGACCGTT‑AACCTGATTTATCTGGCTTTAGCGATTGTTCTCA‑A‑CCTTT‑G‑GGACACCGTGCC‑GGTCCGCCGCCTG‑CGCGCCAGTTTTTCGCGTAAAGGAGCGGTGTGATGCAACCTTTTGGCGTACTTGACCGCTATATCGGTAAAACTATTTTCACCACCATCATGATGACACTGTTCATGCTGGTGTCGCTGTCGGGCATTATCAAGTTTGTCGA‑TCAGCTGAAAAAAGCCGGGCAGGGGAGTTACGACGCGTTAGGCGCAGGAATGTATACCTTG  >  NC_000913/4487013‑4487488

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑