| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 4,542,223 | C→T | 12.2% | R63C (CGC→TGC) | fimE → | tyrosine recombinase/inversion of on/off regulator of fimA |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 4,542,223 | 0 | C | T | 12.2% | 292.6 / 5.7 | 120 | R63C (CGC→TGC) | fimE | tyrosine recombinase/inversion of on/off regulator of fimA |
| Reads supporting (aligned to +/- strand): ref base C (52/50); new base T (13/3); total (67/53) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 3.02e-02 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 126 total aligned reads displayed.
ATTCATTCAAATATATCTCAGTTAGGAGTACTACTATTGTGAGTAAACGTCGTTATCTTACCGGTAAAGAAGTTCAGGCCATGATGCAGGCGGTTTGTTACGGGGCAACGGGAGCCAGAGATTATTGTCTTATTCTGTTGGCATATCGGCATGGGATGCGTATTAGTGAACTGCTTGATCTGCATTATCAGGACCTTGACCTTAATGAAGGTAGAATAAATATTCGCCGACTGAAGAACGGATTTTCTACCGTT‑CACCCGTTAC‑GTTTTGATGAGCGTGAAGCCGT‑GGAACGCTGGACCCAGGAACGTGCTAACTGGAAAGGCGCTGACCGGACTGACGCTATATTTATTTCTCGCCGCGGGAGTCGGCTTTCTCGCCAGCAGGCCTATCGCATTATTCGCGATGCCGGTATTGAAGCTGGAACCGTAACGCAGACTCATCCTCATATGTTAAGGCATGCTTG > NC_000913/4541999‑4542461 | ttcattcaAATATATCTCAGTTAGGAGTACTACTATTGTGAGTAAACGTCGTTATCTTACCGGTAAAGAAGTTCAGGCCATGATGCAGGCGGTTTGTTACGGGGCAACGGGAGCCAGAGATTATTGTCTTATTCTGTTGGCATATCGGCATGGGATGCGTATTAGTGAACTGCTTGATCTGCATTATCAGGACCTTGACCTTAATGAAGGTAGAATAAATATTCGCCGACTGAAGAAc < 1:102685/238‑1 (MQ=255) ttcattcaAATATATCTCAGTTAGGAGTACTACTATTGTGAGTAAACGTCGTTATCTTACCGGTAAAGAAGTTCAGGCCATGATGCAGGCGATTTGTTACGGGGCAACGGGAGCCAGAGATTATTGTCTTATTCTGTTGGCATATCGGCATGGGATGCGTATTAGGGAACTGCTTGATCTGCATTATCAGGACCTTGACCTTAATGAAGGTAGAATAAATATTCGCCGACTGAAGAACg > 1:1321692/1‑239 (MQ=255) tcattcaAATATATCTCAGTTAGGAGTACTACTATTGTGAGTAAACGTCGTTATCTTACCGGTAAAGAAGTTCAGGCCATGATGCAGGCGGTTTGTTACGGGGCAACGGGAGCCAGAGATTATTGTCTTATTCTGTTGGCATATCGGCATGGGATGCGTATTAGTGAACTGCTTGATCTGCATTATCAGGACCTTGACCTTAATGAAGGTAGAATAAATATTTGCCGACTGAAGAACgg > 1:1176340/1‑239 (MQ=255) gTTAGGAGTACTACTATTGTGAGTAAACGTCGTTATCTTACCGGTAAAGAAGTTCAGGCCATGATGCAGGCGGTTTGTTACGGGGCAACGGGAGCCAGAGATTATTGTCTTATTCTGTTGGCATATCGGCATGGGATGCGTATTAGTGAACTGCTTGATCTGCATTATCAGGACCTTGACCTTAATGAAGGTAGAATAAATATTTGCCCGCTTAAGAAAGGAGTTTTTACCGTT‑TAccc > 1:1000833/1‑239 (MQ=255) actactATAGAGAGTAAACGTCGTTATCTTACCGGTAAAGAAGTTCAGGCCATGATGCAGGCGGTTTGTTACGGGGCAACGGGAGCCCAAGATTATTGTCTTATTCTGTTGGGATAACGGCATGGGATGCGGATTAGTGGACTGCTTGTTCTGTCTTATAAGGGCCTTGACCTTAAGTTAGGGAGAATAAAAATTCCACGACTGCAGAACGGATTTTTTAACCGT‑GACCCGGTAA‑Gttt > 2:837179/1‑239 (MQ=255) tactaTTGTGAGTAAACGTCGTTATCTTACCGGTAAAGAAGTTCAGGCCATGATGCAGGCGGTTTGTTACGGGGCAACGGGAGCCAGAGATTATTGTCTTATTCTGTTGGCATATCGGCATGGGATGCGTATTAGTGAACTGCTTGATCTGCATTATCAGGACCTTGACCTTTATGAAGGGAGAATAAATATTTGCCGCCTGAAGAACGGGTTTTTTACCCTT‑CACCCGTTAC‑CGTTtg > 1:439591/1‑239 (MQ=255) ctaTTGTGAATAAACGTTGTTATCTTAACGGTAAAGAAGTTCAGGCCATGATGCAGGCGGTTTGTTACGGGGCAACGGGAGCCAGAGATTATTGTCTTATTTTGTTGGCATATCGGCATGGGATGCGTATTAGTGAACTGCTTGATCTGCATTATCAGGACCTTGACCTTAATGAAGGTAGAATAAATATTCGCCGACTGAAGAACGGATTTTCTACCGTT‑CACCCGTTAC‑GTTTtgat < 2:1321692/239‑1 (MQ=255) aTTGTGAGTAAACGTCGTTATCTTACCGGTAAAGAAGTTCAGGCCATGATGCAGGCGGTTTGTTACGGGGCAACGGGAGCCAGAGATTATTGTCTTATTCTGTTGGCATATCGGCATGGGATGCGTATTAGTGAACTGCTTGATCTGCATTATTAGGACCTTTACCTTAATGAAGGTAGAAAAAAAATTTGCCGACCGAAGAACGGATTTTTTACCGTT‑TACCCGTTAC‑GTTTttattg > 1:1286259/1‑237 (MQ=255) gtgAGTAAACGTCGTTATCTTACCGGTAAAGAAGTTCAGGCCATGATGCAGGCGGTTTGTTACGGGGCAACGGGAGCCAGAGATTATTGTCTTATTTTGTTGGCATATCGGCATTGGATGGGGATTAGTGAAACGCTTGATTTGCATTTTCAGGACCTTGACCTTAATGAAGGTAGAATAAATATTTGCCGACTGAAGAAAGGATTTTTTACCGTT‑CATCCGTTAC‑GTTTTGTTGAGCg > 1:888995/1‑239 (MQ=255) gtgAGTAAACGTCGTTATCTTACCGGTAAAGAAGTTCAGGCCATGATGCAGGCGGTTTGTTACGGGGCAACGGGAGCCAGAGATTATTGTCTTATTCTGTTGGCATATCGGCATGGGATGCGGATTAGTGAACTGCTTGATCTGCATTATCAGGACCTTGACCTTAATGAAGGTAGAATAAATATTCGCCGACTGAAGAACGGATTTTCTACCGTT‑CACCCGTTAC‑GTTTTTATGAGCg > 1:271186/1‑239 (MQ=255) gatttagccgcgtTATCCTCCCGGTAAAGAAGTGCAGGCCTTTATGCAGGCGGTTTGCGACGGGGCAACGGGCGCCAGAGATTAGTGTCGTATTCTGTCTGCATTGCGGCATTGGATGCGTATGAGTGAACTGCTTGATATGCATTATCAGGACCGTGGCCTTAATGAAGGTAGAATAAATATTCGCCGACTGAAGAACGTATTTTCTACCGTT‑CGCCCGTTAC‑GTTTTGATGAGCGTg < 2:861245/229‑1 (MQ=255) aGTAAACGTCGTTATCTTACCGGTAAAGAAGTTCAGGCCATGATGCAGGCGGTTTGTTTCTGGGCAACGGGAGCCAGAGGTTATTTTCTTATTTTTTTGGCATATCCGGATGGGGTGCGGATTAGTGACCTGCTTTGTTTCCATTTTCCGGCACTTGACCTTAATTAAGGAAGAATAAATATTGCCCGCCTGAAGAACGGCTTTTCTACCGTT‑CCCCCGTTAC‑GTTTTGTTGCGCGCGa > 1:1035223/1‑239 (MQ=255) aGTAAACGTCGTTATCTTACCGGTAAAGAAGTTCAGGCCATGATGCAGGCGGTTTGTTACGGGGCAACGGGAGCCAGGGATTATTGTCTTATTCTGTTGGCATATCGGCATGGGATGCGTATTAGTGAACTGCTTGATCTGCATTTTCAGGACCTTGACCTTAATGAAGGTAGAATAAATATTAGCCGCCTGAAGAACGGATTTTCTAACGTT‑TACCCCTTAC‑GGTTTTATGAggtgga > 1:1206966/1‑234 (MQ=255) aGTAAACGTCGTTATCTTACCGGTAAAGAAGTTCAGGCCATGATGCAGGCGGTTTGTTACGGGGCAACGGGAGCCAGAGATTATTGTCTTATTTTGTTGGCATATGGGCATGGGGTGCGTGTTAGTGAACTGCTTGTTCTTCATTATCCGGACCTTGTACTTTATGAAGGTAGAATAAATATTTTCCGACTGAAAAAAGGGTTTTTTCCCGTT‑CCCCCGTTAC‑TTTTTGATTAggggga > 2:1187782/1‑234 (MQ=255) aGTAAACGTCGTTATCTTACCGGTAAAGAAGTTCAGGCCATGATGCAGGCGGTTTGTTAAGGGGCAACGGGAGCCAGAGATTATTGTCTTATTCTGTTGGCATATCGGCAAGGGATGCGTATTAGTGAACTGCTTGATCTGCATTATCAGGACCTTGACCTTAATGAAGGGAGAATAAAAATTTGCCGACTGAAGAACGGATTTTCTACCGTT‑CACCCGTTAA‑CGTTtgattggcggga > 1:693256/1‑231 (MQ=255) tAAACGTCGTTATCTTACCGGTAAAGAAGTTCAGGCCATGATGCAGGCGGTTTTTTACGGGGGAACGGGAGCCAGAGATTATTGTCTTATTCTGTTGGCCTATCCGCAATGGCAGCGTATTTGTGTACTGCTTGGTCTTCATTATCAGGACCTTGACCTTTATGAAGGGAGAATAAATATTCGCCGACTGAAAAACGGATTTTCTACCGTT‑CACACGTTAC‑GTTTTGATGAGCGTGaa > 1:732500/1‑238 (MQ=255) tAAACGTCGTTATCTTACCGGTAAAGAAGTTCAGGCCATGATGCAGGCGGTTTGTTACGGGGCCACGGGAGCCAGGGATTATTGTCTTATTTTGTTGGCATATCGGCATGGGATGCGTATTATTGAACTGCTTGATCTGCATTATCAGGCCCTTGACCTTAATGAAGGCAGAATAAATATTTTCCGACCGAAGAACGAATTTTCTACCGTT‑CACCCCATAA‑GTTTTGATAAAGGTGaaa > 2:119966/1‑238 (MQ=255) aCGTCGTTATCTTACCGGTAAAGAAGTTCAGGCCATGATGCAGGCGGTTTGTTACGGGGCAACGGGAGCCAGAGATTATTGTCTTATTCTGTTGGCATATCGGCATGGGATGCGGATTAGTGAACTGCTTGATCTGCATTATCAGGACCTTGACCTTAATGAAGGTAGAATAAATATTCGCCGACTGAAGAACGGATTTTCTACCGTT‑CACCCGTTAC‑GTTTTGATGAGCGTGAAGCCg > 1:1298657/1‑239 (MQ=255) gtttttttCTTACCGGTAAAGAAGTTCAGGCCATGGTGCAGGCGGTTTGTTACGGGGCAACGGGAGCCAGAGATTATTGTCTTATTCTGTTGGCATATCGGCATGGGATGCGTATTAGTGAACTGCTTGATCTGCATTATCAGGACCTTGACCTTAATGAAGGTAGAATAAATATTCGCCGACTGAAGAACGGATTTTCTACCGTT‑CACCCGTTAC‑GTTTTGATGAGCGTGAAGCCGT‑g < 2:1286259/232‑1 (MQ=255) gtTATCTTACCGGTAAAGAAGTTCAGGCCATGATGCAGGCGGTTTGTTACGGGGCAACGGGAGCCAGAGATTATTGTCTTATTCTGTTGGCATATCGGCATGGGATGCGTATTAGTGAACTGCTTGATCTGCATTATCAGGACCTTGACCTTAATGAAGGTAGAATAAATATTCGCCGACTGAAGAACGGATTTTCTACCGTT‑CACCCGTTAC‑GTTTTGATGAGCGTGAAGCCGT‑GGaa > 1:206523/1‑239 (MQ=255) ttttcccGGTAAAGAGATTCAGGCCAGTATGCAGGCGGTTTGTTACGGGGCAACGGGAGCCAGAGATTATTGTCTTATTCTGTTGGCATTGCGGCATGGGGTGCGTATTAGTGAACTGCTTGATCTGCATTATCAGGACCTTGACCTTAATGAAGGTAGAATAAATATTCGCCGACTGAAGAACGGATTTTCTACCGTT‑CACCCGTTAC‑GTTTTGATGAGCGTGAAGCCGT‑GGAACGCt < 2:208462/234‑1 (MQ=255) tCTTACCGGTAAAGAAGTTCAGGCCATGATGCAGGCGGGTTGTTACGGGGCAACGGGAGCCAGAGATTATTGTCTTATTCTGTTGGCATATCGGCATGGGATGCGTATTAGTGAACTGCTTGATCTGCATTATCAGGACCTTGACCTTAATGAAGGTAGAATAAATATTCGCCGACTGAAGAACGGATTTTCTACCGTT‑CACCCGTTAC‑GTTTTGATGAGCGTGAAGCCGT‑GGAACGCt < 1:837179/239‑1 (MQ=255) tCTTACCGGTAAAGAAGTTCAGGCCATGAAGCAGGCGGTTTGGTACGGGGCAACGGGAGCCAGAGATTATTGTCTTATTCTGTTGGCATATCGGCATGGGATGCGTATTAGTGAACTGCTTGATCTGCATTATCAGGACCTTGACCTTAATGAAGGTAGAATAAATATTCGCCGACTGAAGAACGGATTTTCTACCGTT‑CACCCGTTAC‑GTTTTGATGAGCGTGAAGCCGT‑GGAACGCt < 1:831288/239‑1 (MQ=255) acgtACCGGTAAAGAAGTTCAGGACATGATGCAGGCGTGTTGTTACGGGGCAACGGGGGCCAGAGATTATTGGTTTATTCTGTTGGCATATCGGCATGGGATGCGTATTAGTGAACTGCTTGATCTGCATTATCAGGACCTTGACCTTAATGAAGGTAGAATAAATATTCGCCGACTGAAGAACGGATTTTCTACCGTT‑CACCCGTTAC‑GTTTTGATGAGCGTGAAGCCGT‑GGAACGCt < 1:1280392/236‑1 (MQ=255) aCCGGTAAAGAAGTTCAGGCCATGATGCAGGCGGTTTGTTTTGGGGCAACGGGGGCCAGAGATTATTGTCTTATTCTTTTGGCATATCGGCCTGGGGGGCGGATTAGTTGACTGCTTGATCTGCATTATCAGGACCTTGCCCTTAATGTAGGGAGAAAAAATTTTCTCCGACTTAAAAACGGATTTTCTAACGTT‑CACCCCTTACTGTTTTG‑TGAGGGTGGAACCGTAGGAACggggg > 2:1061594/1‑234 (MQ=255) aCCGGTAAAGAAGTTCAGGCCATGATGCAGGCGGTTTGTTTCGGGGCAACGGGAGCCAGAGATTATTGTCTTATTCTTTTGGCATATCGGCATGGGATGCGGATTAGTGAACTGCTTGATCTGCATTATCAGGACCTTGACCTTAATGAAGGTAGAATAAATATTCGCCGACTGAAGAACGGATTTTTTACCGTT‑TACCCGTTAC‑CTTTTGATGAAGGGGAAACCGT‑GGAAAGCGGGa > 2:717076/1‑238 (MQ=255) aCCGGTAAAGAAGTTCAGGCCATGATGCAGGCGGGTTGTTACCGGGCAACGGGGGCCACGGATTATTTTCTTATTATGTTTGCACATCGGCATGGGGTGCGTATTAGTGGAATGCTTTATTTTGATTATACGGACCTTGACCTTAATTAAGGGAAGAAAAAAATTTGCCGACTGAAGAAAGGATTTTTCACCGTTCCCCCCGCTAT‑GTTTAG‑TGATGGTGAAACCGT‑GGaaaccgtga > 2:268307/1‑231 (MQ=255) aaaGAAGTTCAGGCCATGATGCAGGCGGTTTGTTACGGGGCAACGGGAGCCAGAGATTATTGTCTTATTCTGTTGGCATATCGGCATGGGATGCGGATTAGGGAACTTCTTGATCTGCCTTATCAGGACCTTGACCTTAATGAAGGTAGAATAAATATTCGCCGCCTGAAGAACGGCTTTTTTACCGTT‑CACCCGTTAC‑GTTTTGATGAGCGTGAAGCCCG‑GGGACGCTTGACCCCGGa > 1:1175136/1‑239 (MQ=255) aagaagTTCAGGCCATGATGCAGGCGGTTTGTTACGGGGCAACGGGAGCCAGAGATTATTGTCTTATTCTGTTGGCATATCGGCATGGGATGCGTATTAGGGAACTGCTTGATCTGCATTATCAGGACCTTGACCTTAATGAAGGTAGAATAAATATTCGCCGACTGAAAAACGGATTTTCTACCGTT‑TACCCGTTAC‑GTTTTGATGAGCGTGAAGCCCG‑GGAACGCTGGACCCAGGa > 1:923657/1‑238 (MQ=255) cAGGCCATGATGCAGGCGGTTTGTTACGGGGCAACGGGAGCCAGAGATTATTGTCTTATTCTGTTGGCATATCGGCATGGGTTGCGTATTAGTGAACTGCTTGATCTGCATTTTCAGGACCTTGCCCCTAATGAAGGTAGAATAAATATTCGCCGACTGAAGAACGGATTTTTTACCGTT‑CACCCGTTAC‑CTTTTGATGATCGTGAACCCGT‑GGAACGCTGGACCCAGGAACGCGCTa > 1:994205/1‑238 (MQ=255) cAGGCCATGATGCAGGCGGTTTGTTACGGGGCAACGGGAGCCAGAGATTATTGTCTTATTCTGTTGGCATATCGGCATGGGATGGGGATTAGTGAACTGCTTGATCTGCATTATCAGGACCTTGACCTTAATGAAGGTAGAATAAATATTTGCCGACTGAAGAACGGATTTTCTACCGTT‑TAACCGTTAC‑GTTTTGATGAGCGTGAAGACGT‑GGAACCGTTGACCCCGGGAccgtctct > 1:890922/1‑232 (MQ=255) gatgCAGGCGGTTTGTTACGGGGCAACGGGAGCCAGAGATTATTGTCTTATTCTGTTGGCATATCGGCATGGGATGCGTATTAGTGAACTGCTTGATCTGCATTATCAGGACCTTGACCTTAATGAAGGTAGAATAAATATTCGcc > 1:1039061/1‑146 (MQ=255) gatgCAGGCGGTTTGTTACGGGGCAACGGGAGCCAGAGATTATTGTCTTATTCTGTTGGCATATCGGCATGGGATGCGTATTAGTGAACTGCTTGATCTGCATTATCAGGACCTTGACCTTAATGAAGGTAGAATAAATATTCGcc < 2:1039061/146‑1 (MQ=255) gCGGTTTGTTACGGGGCCACGGGAGCCAGAGATTATTGTCTTATTCTGTTGGCATATCGGCATGGGATGCGTATTAGTGAACTGCTTGATCTTCATTATCAAGACCTTGACCTTAATGAAGGTAGAATAAAAATTCGCCGACTGAAGAACGGATTTTCTACCGTT‑CACCCGTTAC‑GTTTTGATGAGCGGGAAGCCGT‑GGAACGCTTGACCCCGGAACGCGCTAACTGGAAAGGCGCTg > 1:221161/1‑238 (MQ=255) ggttttGTTATGGGGCAAGGGGGGCCAGAGATTTTTGTCTTATTCTGTTGGCATATCGGCATGGGATGCGTATTAGTGAACTGCTTGATCTGCATTATCAGGTCCTTGACCTTAATGAAGGTAGAATAAATATTCGCCGACTGAAGAACGGATTTTCTACCGTT‑CACCCGTTAC‑GTTTTGATGAGCGTGAAGCCGT‑GGAACGCTGGACCCAGGAACGTGCTAACTGGAAAGGCGCTGa < 2:1206966/235‑1 (MQ=255) tGTTACGGGGCAACGGGAGCCAGAGATTATTGTCTTATTCTGTTGGCATATCGGAATGGGATGCGTTTTAGTGAACTGCTTGATCTGCATTATCAGGACCTTGACCTTAATGAAGGTAGAATAAATATTCGCCGACTGAAGAACGGATTTTCTACCGTT‑CACCCGTTAC‑GTTTTGATGAGCGTGAAGCCGT‑GGAACGCTGGACCCAGGAACGTGCTAACTGGAAAGGCGCTGACCGGAc < 1:268307/239‑1 (MQ=255) tccgggAAAAGGGGGCCAGAGAATGTTGACTTATTCCTGTCGCATATCGGCATGGGATGCGTATTAGTAAACCGCTTGATCTGCATTATCAGGACCTTGACCTTAATGAAGGTAGAATAAATATTCGGCGACAGAAGAACGGAGTTGCTACCGTT‑CACCCGTTAC‑GTTTTGAAGAGCGTGAAGCCGT‑GGAACGCTGGACCCAGGAACGTGCTAACTGGAAAGGCGCTGACCGGACTGAc < 1:1291186/236‑1 (MQ=255) cGGGGCAACGGGAGCTAGAGATTATTGTCTTAATCTGTTGGCATATCGGCATGGGATGCGTATTAGTGAACTGCTTGATCTGCATTATCAGGACCTTGACCTTAATGAAGGTAGAATAAATATTCGCCGACTGAAGAACGGATTTTCTACCGTT‑CACCCGTTAC‑GTTTTGATGAGCGTGAAGCCGT‑GGAACGCTGGACCCAGGAACGTGCTAACTGGAAAGGCGCTGACCGGACTGACg < 1:1068320/239‑1 (MQ=255) aggggCCACGGGGGCCAGGAATTTTTGTTTTATTCTTTTGGCATTTCGGCATGGGATGGGTATTAGTGAACTGCTTGATCTGCATTATCAGGACCTTGACCTTAATGAAGGTAGAATAAATATTCGCCGACTGAAGAACGGATTTTCTACCGTT‑CACCCGTTAC‑GGTTTGATGAGCGTGAAGCCGT‑GGAACGCTGGACCCAGGAACGTGCTAACTGGAAAGGCGCTGACCGGACTGACg < 2:286898/238‑1 (MQ=255) ggCAACGGGAGCCAGAGATTATTGTCTTATTCTGTTGGCATATCGGCATGGGATGCGTATTAGTGAACTGCTTGATCTGCATTATCAGGACCTTGACCTTAATGAAGGTAGAATAAATATTCGCCGACTGAAGAACGGATTCTCTACCGTT‑CACCCGTTAC‑GTTTTGATGAGCGTGAAGCCGT‑GGAACGCTGGACCCAGGAACGTGCTAACTGGAAAGGCGCTGACCGGACTGCGGCta > 1:5745/1‑239 (MQ=255) aCGGGAGCCAGAGATTATTGTCTTATTCTGTTGGCATATCGGCATGGGATGCGTATTAGTGAACTGCTTGATCTGCATTATCAGGACCTTGACCTTAATGAAGGTAGAATAAATATTCGCCGACTGAAGAACGGATTTTCTACCGTT‑AACCCGTTAC‑GTTTTGATGGGCGTGAAGCCGG‑GGAACGCTGAACCCAGAAACGTGCTAACTGGAAAAGGGCTGCCCGGGCTGGCGCTAaatt > 2:769929/1‑239 (MQ=255) gCCAGAGATTATTGTCTTATTCTGTTGGCATATCGGCATGGGATGCGTATTAGTGAACTGCTTGATCTGCATTATCAGGACCTTGACCTTAATGAAGGTAGAATAAATATTCGCCGACTGAAGAACGGATTTTCTACCGTT‑CACCCGTTAC‑GTTTTGATGAGCGTGAAGACGT‑GGAACGCTGGACCCAGGAAAGGGCTAACTGGAAAGGCGCTGACCGGATCGACGCTCTatttattt > 1:842034/1‑238 (MQ=255) tATTCTGTTGGCATATCGGCATGGGATGCGTATTAGTGAACTGCTTGATCTGCATTATCAGGACCTTGACCTTAATGAAGGTAGAATAAATATTCGCCGACTGAAGAACGGATTTTCTACCGTT‑CACCCGTTAC‑GTTTTGATGAGCGTGAAGCCGT‑GGAACGCTGGACCCAGGAACGTGCTAACTGGAAAGGCGCTGACCGGCCTGACGCTTAATTTATTTCTCGCCGCGGGGGGCggg > 2:1013139/1‑238 (MQ=255) aTTCTGTTGGCATATCGGCATGGGATGCGTATTAGTGAACTGCTTGATCTGCATTATCAGGACCTTGACCTTAATGAAGGTAGAATAAATATTCGCCGACTGAAGAACGGATTTTCTACCGTT‑CACCCGTTAC‑GTTTTGATGAGCGTGAAGCCGT‑GGAACGCTGGACCCAGGAACGTGCTAACTGGAAAGGCGCTGACCGGACTGACGCTATATTTATTTCTCGCCGCGGGAGTCGGCt > 1:1164010/1‑239 (MQ=255) cTGTTGGCATATCGGCATGGGATGCGTATTAGTGAACTGCTTGATCTGCATTATCAGGACCTTGACCTTAATGAAGGTAGAATAAATATTCGCCGACTGAAGAACGGATTTTCTACCGTT‑CACCCGTTAC‑GTTTTGATGAGCGTGAAGCCGT‑GGAACGCTGGACCCAGGAACGTGCTAACTGGAAAGGCGCTGACCGGACTGCCGCATTATTTATTTCTCGCGCCGGGAGGCGGCTTtc > 2:220254/1‑239 (MQ=255) ttGGCATATCGGCATGGGATGCGTATTAGTGAACTGCTTGATCTGCATTATCAGGACCTTGACCTTAATGAAGGTAGAATAAATATTCGCCGACTGAAGAACGGATTTTCTACCGTT‑CACCCGTTAC‑GTTTTGATGAGCGTGAAGCCGT‑GGAACGCTGGACCCAGGCACGTGCTAACTGGAAAGGCGCTGACCGGGCTTACGCTATCTTTATTTCTACCCGCGGGGGTCGGCTTtctc > 2:905203/1‑238 (MQ=255) ttGGCATATCGGCATGGGATGCGTATTAGTGAACTGCTTGATCAGCATTATCAGGACCTTGACCTTAATGAAGGTAGAATAAATATTCGCCGACTGAAGAACGGATTTTCTACCGTT‑CACCCGTTAC‑GTTTTGATGAGCGTGAAGCCGT‑GGAACGCTGGACCCAGGAACGTGCTAACTGGAAAGGCGCTGACCGGACTCGCGCCATATTTATTTATCGCCGCGGAAGACGGCTTtctc > 2:388953/1‑238 (MQ=255) attgcGGCATGGGATGGCTTTTAGGGAACTGCTTGATCTGCATTATCAGGACCTTGACCTTAATGAAGGTAGAATAAATATTCGCCGACTGAAGAACGGATTTTCTACCGTT‑CACCCGTTAC‑GTTTTGATGAGCGTGAAGCCGT‑GGAACGCTGGACCCAGGAACGTGCTAACTGGAAAGGCGCTGACCGGACTGACGCTATATTTATTTCTCGCCGCGGGAGTCGGCTTTCTCGCcag < 1:959192/234‑1 (MQ=255) tCGGCATGGGATGCGTATTAGTGAACTGCTTGATCTGCATTATCAGGACCTTGACCTTAATGAAGGTAGAATAAATATTCGCCGACTGAAGAACGGATTTTCTACCGTT‑CACCCGTTAC‑GTTTTGATGAGCGTGAAGCCGT‑GGAACGCTGGACCCAGGAACGTGCTAACTGGAAAGGCGCTGACCGGACTGACGCTAAATTTATTTCTCGCCGCGGGAGCCGGCTTTTTCGCcagcag > 1:640050/1‑238 (MQ=255) cATGGGATGCGTATTAGTGAACTGCTTGATCTGCATTATCAGGACCTTGACCTTAATGAAGGTAGAATAAATATTCGCCGACTGAAGAACGGATTTTCTACCGTT‑CACCCGTTAC‑GTTTTGATGAGCGTGAAGCCGT‑GGAACGCTGGACCCAGGAACGTGCTAACTGGAAAGGCGCTGACCGGACTGACGCTATATTTATTTCTCGCCGCGGGAGTCGGCTTTCTCGCCAGCAGGCCt < 1:1077188/238‑1 (MQ=255) aTGCGTATTAGTGAACTGCTTGATCTGCATTATCAGGACCTTGACCTTAATGAAGGTAGAATAAATATTCGCCGACTGAAGAACGGATTTTCTACCGTT‑CACCCGTTAC‑GTTTTGATGAGCGTGAAGCCGT‑GGAACGCTGGACCCAGGAACGTGCTAACTGGAAAGGCGCTGACCGGCCTGACGCTATATTTATTTCTCGCCGCGGGGGTCGGCTTTCTCGCCggccggccattggcat > 1:553393/1‑231 (MQ=255) aTGCGTATTAGTGAACTGCTTGATCTGCATTATCAGGACCTTGACCTTAATGAAGGTAGAATAAATATTCGCCGACTGAAGAACGGATTTTCTACCGTT‑CACCCGTTAC‑GTTTTGATGAGCGTGAAGCCGT‑GGAACGCTGGACCCAGGAACGTGCTAACTGGAAAGGCGCTGACCGGACTGACGCTATATTTATTTCTCGCCGCGGGAGTCGGCTTTCTCGCCAGCAGGCCTATCGCat > 1:1195328/1‑239 (MQ=255) cGTATTAGTGAACTGCTTGATCTGCATTATCAGGACCTTGACCTTAATGAAGGTAGAATAAATATTCGCCGACTGAAGAACGGATTTTCTACCGTT‑CACCCGTTAC‑GTTTTGATGAGCGTGAAGCCGT‑GGAACGCt > 1:1157398/1‑136 (MQ=255) aGTGAACTGCTTGATCTGCATTATCAGGACCTTGACCTTAATGAAGGTAGAATAAATATTCGCCGACTGAAGAACGGATTTTCTACCGTT‑CACCCGTTAC‑GTTTTGATGAGCGTGAAGCCGT‑GGAACGCTGGACCCAGGAACGTGCTAACTGGAAAGGCGCTGACCGGACTGACGCTATATTTATTTCTCGCCGCGGGCGTCGGCTTTCTCGCCCGCAGGCCTATCCCCTTATTCCCGa > 1:433814/1‑239 (MQ=255) gAACTGCTTGATCTGCATTAGCAGGACCTTGACCTTAATGAAGGTAGAATAAATATTCGCCGACTGAAGAACGGATTTTCTACCGTT‑CACCCGTTAC‑GTTTTGATGAGCGTGAAGCCGT‑GGAACGCTGGACCCAGGAACGTGCTAACTGGAAAGGCGCTGACCGGACTGACGCTATATTTATTTCTCGCCGCGGGAGTCGGCTTTCTCGCCAGCAGGCCTATCGCATTATTCGCGATGc < 1:292646/239‑1 (MQ=255) gAACTGCTTGAGCTGCATTATCAGGACCTTGACCTTAATGAAGGTAGAATAAATATTCGCCGACTGAAGAACGGATTTTCTACCGTT‑CACCCGTTAC‑GTTTTGATGAGCGTGAAGCCGT‑GGAACGCTGGACCCAGGAACGTGCTAACTGGAAAGGCGCTGACCGGACTGACGCTATATTTATTTCTCGCCGCGGGAGTCGGCTTTCTCGCCAGCAGGCCTATCGCATTATTCGCGAt < 1:1228769/237‑1 (MQ=255) aaCTGCTTGATCTGCATTATCAGGACCTTGACCTTAATGAAGGTAGAATAAATATTCGCCGACTGAAGAACGGATTTTCTACCGTT‑CACCCGTTAC‑GTTTTGATGAGCGTGAAGCCGT‑GGAACGCTGGACCCAGGAACGGGCTAACTGGAAAGGCGCTGACCGGACGGACGCTAAATTTATTTTCCGCGCGGGGAGTGGGCTTTTTAGCCAGAAGGCCATTCGAATTATTCCCGATGcg > 2:1118493/1‑238 (MQ=255) aaCTGCTTGATCTGCATTATCAGGACCTTGACCTTAATGAAGGTAGAATAAATATTCGCCGACTGAAGAACGGATTTTCTACCGTT‑CACCCGTTAC‑GTTTTGATGAGCGTGAAGCCGT‑GGAACCCTGGACCCAGGAACGTGCTAACTGGAAAGGCGCTGACCGGACTGACGCTATATTTATTTCTCGCCGCGGGAGTCGGCTTTCTCGCCAGCAGGCCTATCGCATTATTCGCGATGcc > 1:864879/1‑239 (MQ=255) cTGCTTGATCTGCATTATCAGGACCTTGACCTTAATGAAGGTAGAATAAATATTCGCCGACTGAAGAACGGATTTTCTACCGTT‑CACCCGTTAC‑GTTTTGATGAGCGTGAAGCCGT‑GGAACGCTGGACCCAGGAACGTGCTAACTGGAAAGGCGCTGACCGGACTGACGCTATATTTATTTTTCGCCGCGGGAGTCGGCTTTCTCGCCAGCAGGCCTATCGCATTATTCGCGATGCCgg > 2:1106468/1‑239 (MQ=255) cTGCTTGATCTGCATTATCAGGACCTTGACCTTAATGAAGGTAGAATAAATATTCGCCGACTGAAGAACGGATTTTCTACCGTT‑CACCCGTTAC‑GTTTTGATGAGCGTGAAGCCGT‑GGAACGCTGGACCCAGGAACGTGCTAACTGGAAAGGCGCTGACCGGACTGACGCTATATTTATTTCTCGCCGCGGGAGTCGGCTTTCTCGCCAGCAGGCCTATCGCATTATTCGCGATGCCgg > 1:606935/1‑239 (MQ=255) cTTGATCTGCATTATCAGGACCTTGACCTTAATGAAGGTAGAATAAATATTCGCCGACTGAAGAACGGATTTTCTACCGTT‑CACCCGTTAC‑GTTTTGATGAGCGTGAAGCCGT‑GGAACGCt > 1:656680/1‑121 (MQ=255) cTTGATCTGCATTATCAGGACCTTGACCTTAATGAAGGTAGAATAAATATTCGCCGACTGAAGAACGGATTTTCTACCGTT‑CACCCGTTAC‑GTTTTGATGAGCGTGAAGCCGT‑GGAACGCt < 2:656680/121‑1 (MQ=255) ttGATTTTCATTTGCAGGACCTGTACCTTAATGAAGGTAGAATAAATATTCGCCGACTGAAGAACGGATTTTCTACCGTT‑CACCCGTTAC‑GTTTTGATGAGCGTGAAGCCGT‑GGAACGCTGGACCCAGGAACGTGCTAACTGGAAAGGCGCTGACCGGACTGACGCTATATTTATTTCTCGCCGCGGGAGTCGGCTTTCTCGCCAGCAGGCCTATCGCATTATTCGCGATGCCGGTAtt < 2:1176340/239‑1 (MQ=255) ttGATCTGGATTATCAGGACCTTGACCTTAATGAAGGTAGAATAAATATTCGCCGACTGAAGAACGGATTTTCTACCGTT‑CACCCGTTAC‑GTTTTGATGAGCGTGAAGCCGT‑GGAACGCTGGACCCAGGAACGTGCTAACTGGAAAGGCGCTGACCGGACTGACGCTATATTTATTTCTCGCCGCGGGAGTCGGCTTTCTCGCCAGCAGGCCTATCGCATTATTCGCGATGCCGGTAtt < 1:199074/239‑1 (MQ=255) tGATCTGCATTATCAGGACCTTGACCTTAATGAAGGTAGAATAAATATTCGCCGACTGAAGAACGGATTTTCTACCGTT‑CACCCGTTAC‑GTTTTGATGAGCGTGAAGCCGT‑GGAACGCTGGACCCAGGAACGTGCTAACTGGAAAGGCGCTGACCGGACTGACGCTATATTTATTTCTCGCCGCGGGAGTCGGCTTTCTCGCCAGCAGGCCTATCGCATTATTCGCGATGCCGGTATTg > 1:941156/1‑239 (MQ=255) cTGCATTATCAGGACCTTGACCTTAATGAAGGTAGAATAAATATTCGCCGACTGAAGAGCGGATTTTCTACCGTT‑CACCCGTTAC‑GTTTTGATGAGCGTGAAGCCGT‑GGAACGCTGGACCCAGGAACGTGCTAACTGGAAAGGCGCTGACCGGACTGACGCTATATTTATTTCTCGCCGCGGGAGTCGGCTTTCTCGCCAGCAGGCCTATCGCATTATTCGCGATGCCGGTATTGAAGc < 1:128698/239‑1 (MQ=255) atgacttttCAGGACACTGGCCTTAAGGAAGGTAAAATAAATATTCGCCGGCTGAAGAACGGATTTTCTACCGTC‑CAACCGGTCC‑GTTTGGATGGGCGGGAAGCCGT‑GGAACGCTGGCCCCAGGAACGTGCTAACCGGAAAGGCGCTGACCGGACTGACGCTAGATTTATTTCTCGCCGCGGGAGTCGGATTTCTGGCCAGCAGGCCTATCGCATTATTCGCGATGCCGGTATTGAAGc < 2:221161/231‑1 (MQ=255) gttcacggtacctgggccttAATTAAGGTAGAATAATTATTTCGCGTCCAAAGTACGGATTTTGTGCCGTT‑CACCCGTTAC‑GTTTTGAAGGGCGTGAAGCCGT‑GGAACGCTGGACCCAGGATCGGGCTAACTGGAAAGGGGCTGACCGGACTGACGATATATTTATTTCTCGCCGCGGGAGTCGGCTTTCTCGCCAGCAGGCCTATCGCATTATTCGCGATGCCGGTATTGAAGCTgg < 2:710455/229‑1 (MQ=255) tCAGGACCTTGACCTTAATGAAGGTAGAATAAATATTCGCCGACTGAAGAACGGATTTTCTACCGTT‑CACCCGTTAC‑GTTTTGATGAGCGTGAAGCCGT‑GGAACGCTGGACCCAGGAACGTGCTAACTGGAAAGGCGCTGTCCGGACTGACGCTATATTTCTTTCTCGCCGCGGGAGTCGGCTTTCTCGCCAGCAGGCCTATCGCATTATTTCAGTTGCCGGTATTGAAGCTGGAACCg > 2:1052290/1‑239 (MQ=255) accttgaccttAATGAAGGTAGAATAAATATTCGCCGACTGAAGAACGGATTTTCTACCGTT‑CACCCGTTAC‑GTTTTGATGAGCGTGAAGCCGT‑GGAACGCTGGACCCAGGAACGTGCTAACTGGAAAGGCGCTGACCGGACTGACGc > 1:847749/1‑148 (MQ=255) accttgaccttAATGAAGGTAGAATAAATATTCGCCGACTGAAGAACGGATTTTCTACCGTT‑CACCCGTTAC‑GTTTTGATGAGCGTGAAGCCGT‑GGAACGCTGGACCCAGGAACGTGCTAACTGGAAAGGCGCTGACCGGACTGACGc < 2:847749/148‑1 (MQ=255) accttgaccttAATGAAGGTAGAATAAATATTCGCCGACTGAAGAACGGATTTTCTACCGTT‑CACCCGTTAC‑GTTTTGATGAGCGTGAAGCCGT‑GGAACGCTGGACCCAGGAACGTGCTAACTGGAAAGGCGCTGACCGGACTGACGCTATATTTATTTCTCGCCGCGGGAGTCGGCTTTCTCGCCAGCAGGCCTATCGCATTATTCGCGATGCCGGTATTGAAGCTGGAACCGTAAc > 1:35823/1‑238 (MQ=255) accttgaccttAATGAAGGTAGAATAAATATTCGCCGACTGAAGAACGGATTTTCTACCGTT‑CACCCGTTAC‑GTTTTGATGAGCGTGAAGCCGT‑GGAACGCTGGACCCAGGAACGTGCTAACTGGAAAGGCGCTGACCGGACTGACGCTATATTTATTTCTCGCCCCGGGAGTCGGCTTTCTCGCCAGCAGGCCTATCGCATTATTCGCGATGCCGGTATTGAAGCTGGAACCGTaaag > 1:619486/1‑237 (MQ=255) tcttgactttTTTGAAGGTTAAATAAATTGTTGCCCGTTGAAGAACGGATTTTCTACCGTT‑CACCCGTTAC‑GTTTTGATGGGCGTGAAGCCGG‑GGAACGCTGGACCCAGGAACGTGCTAACTGGAAAGGCGGTGACCGGACTGACGCTATATTTATTTCTCGCCGCGGGAGTCGGCTTTCTCGCCAGCAGGCCTATCGCATTATTCGCGATGCCGGTATTGAAGCTGGAACCGTAACg < 2:546220/237‑1 (MQ=255) ccttgaccttAATGAAGGTAGAATAAATAGTCGCCGACTGAAGAACGGATTTTCTACCGTT‑CACCCGTTAC‑GTTTTGATGAGCGTGAAGCCGT‑GGAACGCTGGACCCAGGAACGTGCTAACTGGAAAGGCGCTGACCGGACTGACGCTATATTTATTTCTCGCCGCGGGAGTCGGCTTTCTCGCCAGCAGGCCTATCGCATTATTCGCGATGCCGGTATTGAAGCTGGAACCGTAACg < 1:485296/238‑1 (MQ=255) cttgaccttAATGAAGGTAGAATAAATATTCGCCGACTGAAGAACGGATTTTCTACCGTT‑CACCCGTTAC‑GTTTTGATGAGCGTGAAGCCGT‑GGAACGCTGGACCCAGGAACGTGCTAACTGGAAAGGCGCTGACCGGACTGACGCt > 2:1242036/1‑147 (MQ=255) cttgaccttAATGAAGGTAGAATAAATATTCGCCGACTGAAGAACGGATTTTCTACCGTT‑CACCCGTTAC‑GTTTTGATGAGCGTGAAGCCGT‑GGAACGCTGGACCCAGGAACGTGCTAACTGGAAAGGCGCTGACCGGACTGACGCt < 1:1242036/147‑1 (MQ=255) tgaccttAATGAAGGTAGAATAAATATTCGCCGACTGAAGAACGGATTTTCTACCGTT‑CACCCGTTAC‑GTTTTGATGAGCGTGAAGCCGT‑GGAACGCTGGACCCAGGAACGTGCTAACTGGAAAGGCGCTGACCGGACTGACGCTATATTTATTTCTCGCCGCGGGAGTCGGCTTTCTCGCCAGCAGGCCTATCGCATTATTCGCGATGCCGGTATTGAAGCTGGAACCGTAACGCAg > 1:295803/1‑238 (MQ=255) gaccttAATGAAGGTAGAATAAATATTCGCCGACTGAAGAACGGATTTTCTACCGTT‑CACCCGTTAC‑GTTTTGATGAGCGTGAAGCCGT‑GGAACGCTGGACCCAGGAACGTGCTAACTGGAAAGGCGCTGACCGGACTGCCGCTATATTTATTTCTCGCCGCGGGAGTCGGCATTTTCCCCAGCAGGCCTTTCGCCTTATTCCCGGTGCCGGGTTTTACACTGAAACCGTAACGCacac > 2:1043047/1‑239 (MQ=255) gaccttAATGAAGGTAGAATAAATATTCGCCGACTGAAGAACGGATTTTCTACCGTT‑CACCCGTTAC‑GTTTTGATGAGCGTGAAGCCGT‑GGAACGCTGGACCCAGGAACGTGCTAACTGGAAAGGCGCTGACCGGACTGACGCTATATTTATTTCTCGCCGCGGGAGTCGGCTTTCTCGCCAGCAGGCCTATCGCATTATTCGCGATGCCGGTATTGAAGCTGGAACCGTAACGCAGa > 1:1124344/1‑238 (MQ=255) gaccttAATGAAGGTAGAATAAATATTCGCCGACTGAAGAACGGATTTTCTACCGTT‑CACCCGTTAC‑GTTTTGATGAGCGTGAAGCCGT‑GGAACGCTGGACCCAGGAACGTGCTAACTGGAAAGGCGCTGACCGGACTGACGCTATATTTATTTCTCGCCGCGGGAGTCGGCTTTCTCGCCAGCAGGCCTATCGCATTATTCCCGATGCCGGGATTGAAGCTGGAACCGTAACGCAGa > 1:641926/1‑238 (MQ=255) ccttAATGAAGGTAGAATAAATATTCGCCGACTGAAGAACGGATTTTCTACCGTT‑CACCCGTTAC‑GTTTTGATGAGCGTGAAGCCGT‑GGAACGCTGGACCCAGGAACGTGCTAACTGGAAAGGCGCTGACCGGACTGACGCTATATTTATTTCTCGCCGCGGGAGTCGGCTTTCTCGCCAGCAGGCCTATCGCATTATTCGCGATGCCGGTATTGAAGCTGGAACCGTAACGCAGACTc < 1:1106468/239‑1 (MQ=255) tttatgtaaGTTAGATTAAATTTTCGCCACCTGAGAAACGGATTTGCTACCGTG‑CCCCCGTTAC‑GTTTTGATGAGCGTGAAGCCGT‑GGAACGCTGGACCCAGGAACGTGCTAACTGGAAAGGCGCTGACCGGACTGACGCTATATTTATTTCTCGCCGCGGGAGTCGGCTTTCTCGCCAGCAGGCCTATCGCATTATTCGCGATGCCGGTATTGAAGCTGGAACCGTAACGCAGACTCa < 2:634542/232‑1 (MQ=255) tgtAAAGAAGGTTAAAAAAATATTCGGCGGCTGAAGAACGGATTTTCTACCGTT‑CACCCTGTCC‑GTTTTGATGAGCGTGAAGCCGT‑GGAACGCTGGACCCAGGAACGTTCTAACTGGAAAGGCGCTGACCGGACTGACGCTATATTTATTTCTCGCCGCGGGAGGCGGCTTTCTCGCCAGCAGGCCTATCGCATTATTCGCGATGCCGGTATTGAAGCTGGAACCGTAACGCAGACTCa < 2:732500/237‑1 (MQ=255) cttTATGAAGGTAGAATAATTTTTCGCCGACTGAAGAACGGATTTTCTCCCGTT‑CCCCCGTTAC‑GTTTTGATGAGCGTGAAGCCGT‑GGAACGCTGGACCCAGGAACGTGCTAACTGGAAAGGCGCTGACCGGACTGACGCTATATTTATTTCTCGCCGCGGGAGTCGGCTTTCTCGCCAGCAGGCCTATCGCATTATTCGCGATGCCGGTATTGAAGCTGGAACCGTAACGCAGACTCa < 2:295803/239‑1 (MQ=255) tAATGAAGGTAGAATAAATATTCGCCGACTGAAGAACGGATTTTCTACCGTT‑CACCCGTTAC‑GTTTTGATGAGCGTGAAGCCGT‑GGAACGCTGGACCCAGGAACGTGCTAACTGGAAAGGCGCTGACCGGACTGACGCTATATTTATTTCTCGCCGCGGGAGTCGGCTTTCTCGCCAGCAGGCCTATCGCATTATTCGCGATGCCGGTATTGAAGCTGGAACCGTAACGCAGACTCATc < 1:392780/239‑1 (MQ=255) tGAAGGTAGAATAAATATTCGCCGACTGAATAACGGATTTTCTACCGTT‑CACCCGTTAC‑GTTTTGATGAGCGTGAAGCCGT‑GGAACGCTGGACCCAGGAACGTGCTAACTGGAAAGGCGCTGACCGGACTGACGCTATATTTATTTCTCGCCGCGGGAGTCGGCTTTCTCGCCAGCAGGCCTATCGCATTATTCGCGATGCCGGTATTGAAGCTGGAACCGTAACGCAGACTCATCCTc < 1:220254/239‑1 (MQ=255) tGAAGGTAAAATAAATATTCGCCGACTGAAGAACGGATTTTCTACCGTT‑CACCCGTTAC‑GTTTTGATGAGCGTGAAGCCGT‑GGAACGCTGGACCCAGGAACGTGCTAACTGGAAAGGCGCTGACCGGACTGACGCTATATTTATTTCTCGCCGCGGGAGTCGGCTTTCTCGCCAGCAGGCCTATCGCATTATTCGCGATGCCGGTATTGAAGCTGGAACCGTAACGCAGACTCATCCTc < 1:717076/239‑1 (MQ=255) tgaggttatataaattTTCCGCGGCTGAAGAACGGATTTCCCACCCGT‑CACCCGTTAC‑GTTTTGATGAGCGTGAAGCCGT‑GGAACGCTGGACCCAGGAACGTGCTAACTGGAAAGGCGCTGACCGGACTGACGCTATATTTATTTCTCGCCGCGGGAGTCGGCTTTCTCGCCAGCAGGCCTATCGCATTATTCGCGATGCCGGTATTGAAGCTGGAACCGTAACGCAGACTCATCCTCa < 2:910543/230‑1 (MQ=255) aGGTAGAATAAATATGCGCCGATTGAAGAACTGATTCTCTACCGTT‑CCCTCGTTAC‑GTTTTGATGAGCGGTAAGCCGT‑GGACCGCTGGGCCCAGGAACGTGCTAACTGGAAAGGCGCTGACCGGACTGACGCTATATTTATTTCTCGCCGCGGGAGTCGGCTTTCTCGCCAGCAGGCCTATCGCATTATTCGCGATGCCGGTATTGAAGCTGGAACCGTAACGCAGACTCATCCTCat < 2:5745/238‑1 (MQ=255) aGGTAAAATAAATATTCGCCGACTGAAGAACGGATTTTCTACCGTT‑CACCCGTTAC‑GTTTTGATGAGCGTGAAGCCGT‑GGAACGCTGGACCCAGGAACGTGCTAACTGGAAAGGCGCTGACCGGACTGACGCTATATTTATTTCTCGCCGCGGGAGTCGGCTTTCTCGCCAGCAGGCCTATCGCATTATTCGCGATGCCGGTATTGAAGCTGGAACCGTAACGCAGACTCATCCTCat < 1:881453/238‑1 (MQ=255) aataaataTTCGCCGACTGAAGAACGGATTTTCTACCGTT‑CACCCGTTAC‑GTTTTGATGAGCGTGAAGCCGT‑GGAACGCTGGACCCAGGAACGTGCTAACTGGAAAGGCGCTGACCGGACTGACGCTATATTTATTTCTCGCCGCGGGAGTCGGCTTTCTCGCCAGCAGGCCTATCGCATTATTCGCGATGCCGGTATTGAAGCTGGAACCGTAACGCAGACTCATCCTCATATGTTaa > 1:910543/1‑239 (MQ=255) taaataTTCGCCGACTGAAGAACGGATTTTCTCCCGTT‑CCCCCGTTAC‑GTTTTGATGGGCGTGAAGCCGG‑TGAACGCTGGACCCAGGAACGTGCTAACTGGAAAGGCGCTGACCGGACTGACGCTATATTTATTTCTCGCCGCGGGAGTCGGCTTTCTCGCCAGCAGGCCTATCGCATTATTCGCGATGCCGGTATTGAAGCTGGAACCGTAACGCAGACTCATCCTCATATGTTAAgg < 1:727294/239‑1 (MQ=255) taaataTTCGCCGACTGAAGAACGGATTTTCTACCGTT‑CACCCGTTAC‑GTTTTGATGAGCGTGAAGCCGT‑GGAACGCTGGACCCAGGAACGTGCTAACTGGAAAGGCGCTGACCGGACTGACGCTATATTTATTTCTCGCCGCGGGAGTCGGCTTTCTCGCCAGCAGGCCTATCGCATTATTCGCGATGCCGGTATTGAAGCTGGAACCGTAACGCAGACTCATCCTCATATGTTAAgg < 1:388953/239‑1 (MQ=255) atatTCGCCGACTGAAGAACGGATTTTCTACCGTT‑CACCCGTTAC‑GTTTTGATGAGCGTGAAGCCGT‑GGAACGCTGGACCCAGGAACGTGCTAACTGGAAAGGCGCTGACCGGACTGACGCTATATTTATTTCTCGCCGCGGGAGTCGGCTTTCTCGCCCGCAGGCCTATCGCATTATTCGCGTTGCCGGTATTTAAGCTGGAACCGTAACGCAGCACCATCCCCAAATGGTAAGGCac > 2:330410/1‑238 (MQ=255) atatTCGCCGACTGAAGAACGGATTTTCTACCGTT‑CACCCGTTAC‑GTTTTGATGAGCGTGAAGCCGT‑GGAACGCTGGACCCAGGAACGTGCTAACTGGAAAGGCGCTGACCGGACTGACGCTATATTTATTTCTCGCCGCGGGAGTCGGCTTTCTCGCCAGCAGGCCTATCGCATTATTCGCGATGCCGGTATTGAAGCTGGAACCGTAACGCAGACTCATCCTCATATGTTAAGGCa > 1:435635/1‑238 (MQ=255) cGCCGACTGAAGAACGGATTTTCTACCGTT‑CTCCCGTTAC‑GTTTTGTTGAGCGTGACGCAGT‑GGAACGCTGGACCCAGGAAAGTACTAACTGGTAAGGCGCTGACCGGACTGCAGCTCCCTTTATTTATCGCCGCGGGAGTCGGCTTTTTCGCCAGCAGGCCTATCGCATTATCAGCGATGCCGGTTTTACAGCTGGAACCGCAACCCCAACGCCTCCTCACATCTTAAgcaatgtta > 2:91054/1‑230 (MQ=255) cGCCGACTGAAGAACGGATTTTCTACCGTT‑CCCCCGTTAC‑GTTTTGATGAGCGTGAAGCCGT‑GGAACGCTGGACCCAGGAACGTTCTAACTGGAAAGGCGCTGACCGGACTGACGCTATATTTATTTCTCGCCGCGGGAGTCGGCTTTCTCGCCAGCAGGCCTATCGCATTATTCGCGATGCCGGTATTGAAGCTGGAACCGTAACGCAGACTCATCCTCATATGTTAAGGCATGCTTg < 1:165354/239‑1 (MQ=255) cGCCGACTGAAGAACGGATTTTCTACCGTT‑CACCCGTTAC‑GTTTTGATGAGCGTGAAGCCGT‑GGAACGCTGGACCCAGGAACGTGCTAACTGGAAAGGCGCTGACCGGACTGACGCTATATTTATTTCTCGCCGCGGGAGTCGGCTTTCTCGCCAGCAGGCCTTTCGCATTATTCCCGCTGCCGGGATTGAAGCTGGAACCGTAAGGCAGAATCATCTCCATTTGTTAAGGCATGCTTg > 2:588167/1‑239 (MQ=255) cGCCGACTGAAGAACGGATTTTCTACCGTT‑CACCCGTTAC‑GTTTTGATGAGCGTGAAGCCGT‑GGAACGCTGGACCCAGGAACGTGCTAACTGGAAAGGCGCTGACCGGACTGACGCTATATTTATTTCTCGCCGCGGGAGTCGGCTTTCTCGCCAGCAGGCCTATCGCATTATTCGCGATGCCGGTATTGAAGCTGGAACCGTAACGCAGACTCATCCTCATATGTTAAGGCATGCtt > 1:354369/1‑238 (MQ=255) | ATTCATTCAAATATATCTCAGTTAGGAGTACTACTATTGTGAGTAAACGTCGTTATCTTACCGGTAAAGAAGTTCAGGCCATGATGCAGGCGGTTTGTTACGGGGCAACGGGAGCCAGAGATTATTGTCTTATTCTGTTGGCATATCGGCATGGGATGCGTATTAGTGAACTGCTTGATCTGCATTATCAGGACCTTGACCTTAATGAAGGTAGAATAAATATTCGCCGACTGAAGAACGGATTTTCTACCGTT‑CACCCGTTAC‑GTTTTGATGAGCGTGAAGCCGT‑GGAACGCTGGACCCAGGAACGTGCTAACTGGAAAGGCGCTGACCGGACTGACGCTATATTTATTTCTCGCCGCGGGAGTCGGCTTTCTCGCCAGCAGGCCTATCGCATTATTCGCGATGCCGGTATTGAAGCTGGAACCGTAACGCAGACTCATCCTCATATGTTAAGGCATGCTTG > NC_000913/4541999‑4542461 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |