| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 3,289,078 | C→A | 13.8% | Q89K (CAG→AAG) | yraJ → | putative outer membrane protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 3,289,078 | 0 | C | A | 13.8% | 355.9 / 11.6 | 141 | Q89K (CAG→AAG) | yraJ | putative outer membrane protein |
| Reads supporting (aligned to +/- strand): ref base C (93/25); new base A (3/18); total (96/45) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 2.26e-08 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 141 total aligned reads displayed.
CGCACACCGAAACAGTTGGCGCTCATCATCAAACGTTGTTTGCCGATGGTGCTCACTGGCAGCGGCATGCTTTGCACTACCGCTAACGCCGAAGAGTATTATTTCGACCCCATTATGCTGGAAACCACAAAAAGTGG‑TATGCAAACAACCGATCTGTCGCGTTTTTCAAAAAAATAT‑GCACAACTACCAG‑GA‑ACTTATCAGGTTGATATCT‑GGCTGAATAAAAAGAAGGTTTCACAGAAAAAAATTACA‑TT‑TACCGCCAATGCAGAGCAACTTCTGCAGCCACAGTTTACGGTAGAACAACTACGTGAGCTGGGTATTAAGGTGGATGAAATCCCGGCGCTGGCTGAAAAAGATGACGATAGCGTGATCAACTCGCTTGAACAAATCATTCCCGGTACAGCTGCTGAATTTGATTTCAATCATCAGCAACTTAATTTGAGCATTCCCCAAATTGCACTGTACCGTGATG > NC_000913/3288844‑3289312 | cGCACACCGAAACAGTTGGCGCTCATCATCAAACGTTGTTTGCCGATGGTGCTCACTGGCAGCGGCATGCTTTGCACTACCGCTAACGCCGAAGAGTATTATTTCGACCCCATTATGCTGGAAACCACAAAAAGTGG‑TATGCAAACAACCGATCTGTCGCGTTTTTCAAAAAAATAT‑GCACAACTACCAG‑GA‑ACTTATCAGGTTGATATCT‑GGCTGAATAAAAAGAAGGTTTCACAGaa < 1:111053/239‑1 (MQ=255) gCACACCGAAACAGTTGGCGCTCATCATCAAACGTTGTTTGCCGATGGTGCTCACTGGCAGCGGCATGCTTTGCACTACCGCTAACGCCGAAGAGTATTATTTCGACCCCATTATGCTGGAAACCACAAAAAGTGG‑TATGCAAACAACCGATCTGTCGCGTTTTTCAAAAAAATAT‑GCACAACTACCAG‑GA‑ACTTATCAGGTTGATATCT‑GGCTGAATAAAAAGAAGGTTTCACAGaaa > 1:195353/1‑239 (MQ=255) cacaCCGAAACAGTTGGCGCTCATCATCAAACGTTGTTTGCCGATGGTGCTCACTGGCAGCGGCATGCTTTGCACTACCGCTACCGCCGAAAAGTATTATTTCGACCCCATTATGCTGGAAACCACAAAAAGAGG‑TATGCAAACAACCGATCTGTCGCGTTTTTCAAAAAAATAT‑GCACAACTACCAG‑GA‑ACTTATCAGGTTGAAATCT‑GGCTGAATAAAAAAAAGGTTTCACAGaaaa > 1:699866/1‑239 (MQ=255) cGAAACAGTTGGCGCTCATCATCAAACGTTGTTTGCCGATGGTGCTCACTGGCAGCGGCATGCTTTGCACTACCGCTAACGCCGAAGAGTATTATTTCGACCCCATTATGCTGGAAACCACAAAAAGTGG‑TATGCAAACAACCGATCTGTCGCGTTTTTCAAAAAAATAT‑GCACACCTACCAG‑GA‑ACTTATCAGGTTGATATAT‑GGCTGAATAAAAAGAAGGTTTCAAAAAAAAAAAtt > 2:870409/1‑239 (MQ=255) gAAACAGTTGGCGCTCATCATCAAACGTTGTTTGCCGATGGTGCTCACTGGCAGCGGCATGCTTTGCACTACCGCTAACGCCGAAGAGTATTATTTCGACCCCATTATGCTGGAAACCACAAAAAGTGG‑TATGCAAACAACCGATCTGTCGCGTTTTTCAAAAAAATAT‑GCACAACTACCAG‑GA‑ACTTATCAGGTTGATATCT‑GGCTGAATAAAAAGAAGGTTTCACAGAAAAAAATTa < 2:908978/239‑1 (MQ=255) ttGGCGCTCATCATCAAACGTTGTTTGCCGATGGTGCTCACTGGCAGCGGCATGCTTTGCACTACCGCTAACGCCGAAGAGTATTATTTCGACCCCATTATGCTGGAAACCACAAAAAGTGG‑TATGCAAACAACCGATCTGTCGCGTTTTTCAAAAAAATAT‑GCACAACTACCAG‑GA‑ACTTATCAGGTTGATATCT‑GGCTGAATAAAAAGAAGGTTTCACAGAAAAAAATTACA‑TT‑Ta > 1:1107462/1‑238 (MQ=255) ttGGCGCTCATCATCAAACGTTGTTTGCCGATGGTGCTCACTGGCAGCGGCATGCTTTGCACTACCGCTAACGCCGAAGAGTATTATTTCGACCCCATTATGCTGGAAACCACAAAAAGTGG‑TATGCAAACAACCGATCTGTCGCGTTTTTCAAAAAAATAT‑GCACAACTACCAG‑GA‑ACTTATCAGGTTGATATCT‑GGCTGAATAAAAAGAAGGTTTCACAGAAAAAAATTACA‑TT‑Ta > 1:1271514/1‑238 (MQ=255) ggCGCTCATCATCAAACGTTGTTTGCCGATGGTGCTCACTGGCAGCGGCATGCTTTGCACTACCGCTAACGCCGAAGAGTATTATTTCGACCCCATTATGCTGGAAACCACAACAAGTGG‑TATGCAAACAACCGATCTGTCGCGTTTTTCAAAAAAATAT‑GCACAACTACCAG‑GA‑ACTTATCAGGTTGATACCT‑GACTGAATAAAAAGAAGGTTTCACAGAAAAAAATTACA‑TT‑TAcc > 1:1024093/1‑238 (MQ=255) ggCGCTCATCATCAAACGTTGTTTGCCGATGGTGCTCACTGGCAGCGGCATGCTTTGCACTACCGCTAACGCCGAAGAGTATTATTTCGACCCCATTATGCTGGAAACCACAAAAAGTGG‑TATGCAAACAACCGATCTGTCGCGTTTTTCAAAAAAATAT‑GCACAACTACCAG‑GA‑ACTTATCAGGTTGATATCT‑GGCTGAATAAACAGAAGGTTTCACAGAAAAAAATTACA‑TT‑TAcc > 1:170602/1‑238 (MQ=255) ggCGCTCATCATCAAACGTTGTTTGCCGATGGTGCTCACTGGCAGCGGCATGCTTTGCACTACCGCTAACGCCGAAGAGTATTATTTCGACCCCATTATGCTGGAAACCACAAAAAGTGG‑TATGCAAACAACCGATCTGTCGCGTTTTTCAAAAAAATAT‑GCACAACTACCAG‑GA‑ACTTATCAGGTTGATATCT‑GGCTGAATAAAAAGAAGGTTTCACAGAAAAAAATTACA‑TT‑TAcc > 1:682798/1‑238 (MQ=255) ggCGCTCATCATCAAACGTTGTTTGCCGATGGTGCTCACTGGCAGCGGCATGCTTTGCACTACCGCTAACGCCGAAGAGTATTATTTCGACCCCATTATGCTGGAAACCACAAAAAGTGG‑GATGCAAACAACCGATCTGTCCCGTTTTTCAAAAAAATAT‑GCACAACTACCAG‑GA‑ACTTATCAGGTTGATATCT‑GGCTGAATAAAAAGAAGGATTCACAGAAAAAAATTACA‑TT‑TAcc > 1:902494/1‑238 (MQ=255) gttgttTGCCGATGGTGCTCACTGGCAGCGGCATGCTTTGCACTACCGCTAACGCCGGAGAGTATTATTTCGACCCCATTATGCTGGAAACCACAAAAAGTGG‑TATGCAAACAACCGATCTGTCGCGTTTTTCAAAAAAATAT‑GCACAACTACCAG‑GA‑CCTTATCAGGTTGATATCT‑GGCGGATTAAAAAGAAGGTTCAACAGAAACAAATTACA‑TT‑TACCGCCAATGCAAAACaaat > 2:624107/1‑236 (MQ=255) ttttGCCGATGGTGCTCACTGGCAGCGGCATGCTTGGCACTACCGCAAACGCCAAAGAGTTTTATTCCGACCCCATTATGCGGGAAACCAAAAAAAGTGG‑TATGCAAACAACCGATCTGTCGCGTTTTTCAAAAAAATAT‑CAACAACTCCCAG‑GA‑CCTTATAAGGTTGATATCT‑GGTTGAATAAAAAAAAGTTTTCCCAGAAAAAAATTACA‑TT‑TACCGCCAATGCAGAGCAACTTCTg < 1:1000071/238‑1 (MQ=255) tGCCGATGGTGCTCACTGGCAGCGGCATGCTTTGCACTACCGCTAACGCCGAAGAGTATTATTTCGACCCCATTATGCTGGAAACCACAAAAAGTGG‑TATGCAAACAACCGATCTGTCGCGTTTTTCAAAAAAATAT‑GCACAACTACCAG‑GA‑ACTTATCAGGTTGATATCT‑GGCTGAATAAAAAGAAGGTTTCACAAAAAAAAATTACA‑TT‑TACCCCCAATGCAGAGAAAATTCGGCAg > 2:1013698/1‑239 (MQ=255) tGGTGCTCACTGGCAGCGGCATGCTTTGCAATACCGCTAACGCCGAAGAGTATTATTTCGACCCCATTCTGCTGGAAACCACAAAAAGTGG‑TATGCAAACAACCGCTCTGTCGCGGTTTTCAAAAAAATTT‑GCACAACCACCAT‑GA‑ACTTATCAGGTTGTTATCT‑TGCTGAATAAAGAGCAGGCTTCAAAGAAAAAAATAACA‑TT‑TACCCCCAATGAATGGCAACTTTTgacaccacaa > 2:720432/1‑230 (MQ=255) cTGGAAGCGGAATGTTTTTCACTACCGCTAACGCGGAGGAGTATTATTTCGACCCCATTATGCTGGAAACCAAAAAAAGTGG‑TATGCAAACAACCGATCTGGCGCTTTTTTAAAAAAAATAT‑GCACAACTACCAG‑GA‑ACTTATCAGGTTGATATCT‑GGCTAAATAAAAAGAAGGTTTCACAGAAAAAAATTACA‑TT‑TACCGCCAATGCAGAGCAACTTCTGCAGCCACAGTTTACGGTa < 1:526593/239‑1 (MQ=255) caccgtcATGCGTTGCACTACCGCTAACGCCGAAGAGTATTATTTCGACCCCATTATGCTGGAAACCACAAAAAGTGG‑TATGCAAACAACCGATCTGTCGCGTTTTTCAAAAAAATAT‑GCACAACTACCAG‑GA‑ACTTATCAGGTTGATATCT‑GCATGAATAAAAAGAAGGTTTCACGGAAAAAAATTACA‑TT‑TAACCCCAAGGAAAAACACATCCTGCAGCCAAAGTTAACGGAAAaac > 2:315655/7‑239 (MQ=255) ggCTTGTTTTGCACTACCGCTAACGCCGAAGAGTATTATTTCGACCCCATTAGGCTGAAAACCAAAAAAAGTGG‑TATGCAAACAACCGATCTGTCGCTTTTTTAAAAAAAATAG‑GCACAACTCCCAG‑GA‑ATTTATCAGGTTGATATCT‑GGCTGAATAAAAAGAAGGTTTCAAAGAAAAAAATTACA‑TT‑TACCGCCAATGCAGAGCAACTTCTGCAGCCACAGTTTACGGTAGaacaa < 1:437542/237‑1 (MQ=255) gCATGCTTTGCACTACCGCTAACGCCGAAGAGTATTATTTCGACCCCATTATGCTGGAAACCACAAAAAGTGG‑TATGCAAACAACCGATCTGTCGCGTTTTTCAAAAAAATAT‑GCACAACTACCAG‑GA‑ACTTATCAGGTTGATATCT‑GGCTGAATAAAAAGAAGGTTTCACAGAAAAAATTTACA‑TT‑TACCGCCAATGCAGAGCAACTTCTGCAGCCCCAGTTTCCGGTAGAACAACt > 1:785628/1‑238 (MQ=255) ctttttttGCACTCCCGATAAGCCCAAAGATTTTTTTTTCGCCCCAATTAGGGTGGAAACCAAAAAAAGTGG‑TATGCAAACAACCGACTTGTCGCTTTTTTCAAAAAAATAT‑GCACAACAACCAG‑GA‑TTTTATCAGTTTGATATCT‑GGTTGAATAAAAAGAAGTTTTCACAGAAAAAAATTAAT‑TT‑TACCGCCAATGCAGAGCAACTTCTGCAGCCACAGTTTACGGTAGAACAACTa < 1:487671/233‑1 (MQ=255) ttggcaaacccGTTAACGCAGAAGAGTTTTATTTCGCCCCCTTTATGCTGGAACCCAAAAAATGGGA‑GATGAAAAGATCCTATCTGCCGCTTTTTCAAAAAAAATAT‑ACA‑GACTGACAG‑GAGATTAATCGGGTTAATCTCT‑GCGTGAAAAAAAAGACGGTTCCAAAGAAAAAAATTCCG‑TT‑TACCGCCAATGCAGAGCAACTTCTGCAGCCACAGTTTACGGTAGAACAACTACGTGAg < 2:794235/230‑1 (MQ=255) tctcatACCGCTAACCACGAAGGTTTTTTTTCCCACCCCTTTATGGTGGAAACCAAAAAAAGGGG‑TAAGAAACAAACCGATTGGTCGTGTTTTAAAAAAAAAAAG‑GCCAAACTCCCGG‑GA‑ATTTATCAGGTTGATACCG‑GGCTAAAAAAAAAAAAGGTTCAACAAAAAAAAATTACT‑TT‑TACCGCCAATGCAGAGCAACTTCTGCAGCCACAGTTTACGGTAGAACAACTACGTGAGCt < 2:401136/234‑1 (MQ=255) tGCCCTCCCGCTAACCCCGAAGAGTTATATGTCGACCCCTTTATGCTGGAAACCAAAAAAAGTGG‑TATGCAAACAACCGATCTGCCGCTTTTTCAAAAAAAAGAT‑GCAAAATGACCAG‑GA‑ACTTAACGGGTTGATATCT‑GGCTGAATAAAAAGAGTGTTTCCCAGAAAAAAATTCCA‑TT‑TACCGCCAATGCAGAGCAACTTCTGCAGCCACAGTTTACGGTAGAACAACTACGTGAGCt < 1:306006/239‑1 (MQ=255) tGCCCTACCGCTAACGCAGAGGTGTATTATTTCGACCCAATTATGCGGGAAACCAAAAAAAGTGG‑TTTGAAAACAACCGTTTTGTCGGGTTTTCCAAAAAAATAT‑GCACAACTACCAG‑GA‑ACTTATCAGGTGGATATCT‑GGCTGAATAAAAAGAAGGTTTCACAGAAAAAAATTACA‑TT‑TACCGCCAATGCAGAGCAACTTCTGCAGCCACAGTTTACGGTAGAACAACTACGTGAGCt < 1:799008/239‑1 (MQ=255) cACTACCGCTAACGCCGAAGAGTATTATTTCGACCCCATTATGCTGGAAACCACAAAAAGTGG‑TATGCAAACAACCGATCTGTCGCGTTTTTCAAAAAAATAT‑GCACAACTACCAG‑GA‑ACTTATCAGGTTGATATCT‑GGCTGAATAAAAAGAAGGTTTCACAGAAAAAAATTACA‑TT‑TACCGCCAATGCAGAGCAACTTCTGCAGCCACAGTTTACGGTAGAACAACTACGTGAGCTgg > 1:140874/1‑239 (MQ=255) ccGCTAACGCCGAAGAGTATTATTTCGACCCCATTATGCTGGAAACCACAAAAAGTGG‑TATGCAAACAACCGATCTGTCGCGTTTTTCAAAAAAATAT‑GCACAACTAACAG‑GA‑ACTTATCAGGTTGATATCT‑GGCTGAATAAAAAAAAGGTTTACAAGACAAAAATTACA‑TT‑TACGGCCAATCCAAAGCAAATTCTACACCCACAGTTTACGGTAGAACAAACACGCGAACCGGGAAtt > 2:1086494/1‑239 (MQ=255) ccGATAACGCCAAAGAGTATTTTTGCGACCCAATTTGGCTGGAAACCAAAAAAAGTGG‑AAGGCAAACAACCGATCTGCCGGGTTTTTAAAAAAAATAG‑GAAAAACTACCAG‑GA‑ACTTATCAGTTTGATATCT‑GGTTGAATAAAAAGAAGGTTTCACAGAAAAAAATTACA‑TT‑TACCGCCAATGCAGAGCAACTTCTGCAGCCACAGTTTACGGTAGAACAACTACGTGAGCTGGGTAtt < 1:405662/239‑1 (MQ=255) cTAACGCCGAAGAGTATTATTTCGACCCCATTATGCTGGAAACCACAACAAGTGG‑TATGCAAACAACCGATCTGTCGCGTTTTTCAAAAAAATAT‑GCACAACTACCAG‑GA‑ACTTATCAGGTTGATATCT‑GGCTGAATAAAAAGAAGGATTCACAGAAAAAAATTACA‑TT‑TACCGCCAATGCAGAGCAACTTCTGCAGCCACCGTTTACGGTAAAACAACAACTGGACCGGGGAATTagg > 2:1113507/1‑237 (MQ=255) cTAACGCCGAAGAGTATTATTTCGACCCCATTATGCTGGAAACCACAAAAAGTGG‑TATGCAAACAACCGATCTGTCGCGTTTTTCAAAAAAATAT‑GCACAACTACCAG‑GA‑ACTTATCAGGTTGATATCT‑GGCTGAATAAAAAGAAGGTTTCACAGAAAAAAATTACA‑TT‑TACCGCCAATGCAGAGCAACTTCTGCAGCCACAGTTTACGGTAGAACAACTACGTGAGCTGGGTATTAAg > 1:1146885/1‑239 (MQ=255) aCGCCGAAGAGTATTATTTCGACCCCATTATGCTGGAAACCACAAAAAGTGG‑TATGCAAACAACCGATCTGTCGCGTTTTTCAAAAAAATAT‑GCACAACTACCAG‑GA‑ACTTATCAGGTTGATATCT‑GGCTGAATAAAAAGAAGGTTTCACAGAAAAAAATTACA‑TT‑TACCGCCAATGCAGAGCAACTTCTGCAGCCACAGTTTACGGTAGAACAACTACGTGAGCTGGGAATTAAg > 1:1113089/1‑236 (MQ=255) aaGAGTATTATTTCGACCCCATTATGCTGGAAACCACAAAAAGTGG‑TATGCAAACAACCGATCTGTCGCGTTTTTCAAAAAAATAT‑GCACAACTACCAG‑GA‑ACTTATCAGGTTGATATCT‑GGCTGAATAAAAAGAAGGTTTCACAGAAAAAAATTACA‑TT‑TACCGCCAATGCAGAGCAACTTCTGCAGCCACAGTTTACGGTAGAACAACTACGTGAGCTGGGAATTAAGGTGGATGaa > 1:867130/1‑239 (MQ=255) tattTCGACCCCATTATGCTGGAAACCACAAAAAGTGG‑TATGCAAACAACCGATCTGTCGCGTTTTTCAAAAAAATAT‑GCACAACTACCAG‑GA‑ACTTATCAGGTTGATATCT‑GGCTGAATAAAAAAAAGGTTTCACAGAAAAAAATTAAA‑TT‑TACCGCCAATGCAGAGCAACTTCTACAGCCAAAGTTTACGGTAGAAAAACAACTTGAGCTGGGAATTAAGGTGGATGAAATCCCGgc > 2:339203/1‑239 (MQ=255) cGACCCCATTATGCTGGAAACCACAAAAAGTGG‑TATGCAAACAACCGATCTGTCGCGTTTTTCAAAAAAATAT‑CCACAACTACCAG‑GA‑ACTTATCAGGTTGATATCT‑GGCTGAATAAAAAGAAGGTTTCACAGAAAAAAATTACA‑TT‑TACCGCCAATGCAGGGAAACTTCTGCAGCAACAGTTTACGGTAGACCAACTACTGAAGCTGGGGATTAAGGGGGATGAAATCCCGCCgcggg > 1:1178853/1‑239 (MQ=255) aCCCTATTATGCTGGAAACCACAAAAAGTGG‑TATGCAAACAACCGATCTGTCGCGTTTTTCAAAAAAATAT‑GCACAACTACCAG‑GA‑ACTTATCAGGTTGATATCT‑GGCTGAATAAAAAGAAGGTTTCACAGAAAAAAATTACA‑TT‑TACCGCCAATGCAGAGCAACTTCTGCAGCCACAGTTTACGGTAGAACAACTACGTGAGCTGGGTATTAAGGTGGATGAAATCCCGGCcctggct > 1:1282493/1‑239 (MQ=255) aCCCCATTATGCTGGAAACCACAAAAAGTGG‑TATGCAAACAACCGATCTGTCGCGTTTTTCAACAAAATAT‑GCACAACTACCAG‑GA‑ACTTATCAGGTTGATATCT‑GGCTGAATAAAAAGAAGGTTTCACAGAAAAAAATTACA‑TT‑TACCGCCAATGCAGAGAAACTTCTGCAGCAACAATTTACGGTAGAAAAACAACATGAGCTGGGTTTTAGGGGGGATAAAATCCGGgcgcgcttg > 2:1257114/1‑234 (MQ=255) aCCCCATTATGCTGGAAACCACAAAAAGTGG‑TATGCAAACAACCGATCTGTCGCGTTTTTCAACAAAATAT‑GCACAACTACCAG‑GA‑ACTTATCAGGTTGATATCT‑GGCTGAATAAAAAGAAGGTTTCACAAAAAAAAATTACC‑TT‑TACCGCCAATGCAAAGCAACTTCTGCAGCAACCATTTCAGGTAGACTAACTACGTGACCTGGGTATTAAGGGGAATGAAATCCCGgcccagacg > 2:1299989/1‑232 (MQ=255) aCCCCATTATGCTGGAAACCACAAAAAGTGG‑TATGCAAACAACCGATCTGTCGCGTTTTTCAAAAAAATAT‑GCACAACTACCAG‑GA‑ACTTATCAGGTTGATCTCT‑GGCTGAATAAAAAGAAGGTTTCACAGAAAACAATTACA‑TT‑TACCGCCAATGCAGAGAAACTTCTGCAGCCACCATTTACGGTAGAACAAATAGGTGAGATGGGTCTTCAGGTGTGTGAAAACCCTGCgctg > 1:937952/1‑236 (MQ=255) aCCCCATTATGCTGGAAACCACAAAAAGTGG‑TATGCAAACAACCGATCTGTCGCGTTTTTCAAAAAAATAT‑GCACAACTACCAG‑GA‑ACTTATCAGGTTGATATCT‑GGCTGAATAAAAAGAAGGTTTCACAGAAAAAAATTACA‑TT‑TACCGCCAATGCAGAGCAACTTCTGCAGCCACAGTTTACGGTAGAACAACTACGTGAGCTGGGTATTAAGGTGGATGAAATCCCGGCgctg > 1:817456/1‑236 (MQ=255) aCCCCATTATGCTGGAAACCACAAAAAGTGG‑TATGCAAACAACCGATCTGTCGCGTTTTTCAAAAAAATAT‑GCACAACTACCAG‑GA‑ACTTATCAGGTTGATATCT‑GGCTGAATAAAAAGAAGGTTTCACAGAAAAAAATTACA‑TT‑TACCGCCAATGCAGAGCAACTTCTGCAGCCACAGTTTACGGTAGAACAACTACGTGAGCTGGGGATTAAGTTGGATGAAATCCCGCCgctggcg > 1:798538/1‑238 (MQ=255) cATTTTGCGGAAAACAAAAAAAAGGGG‑TACGAAAAAACCAGTACTGTGGGGTTTGTAAAAAAATAAA‑GCAAATGTACCAG‑AA‑ATTTAGAAGGTT‑AAATCTGGGCGAAAAAAAAAGAAGTTTCCAAAGAAAAAATTTACA‑TT‑AACCGCCAATGCAGAGCAACTTCTGCAGCCACAGTTTACGGTAGAACAACTACGTGAGCTGGGTATTAAGGTGGATGAAATCCCGGCGCTGGCTGaaa < 2:817456/239‑1 (MQ=255) cATTAGGCTGAAAACCAAAAAAAGTGT‑TATGCAAACAACCGATCTGGCGCTTTTTCAAAAAAAATAG‑GCCCAACTACCAG‑GA‑ACTTATCAGGTGGATATCT‑GGCAGAAAAAAAAGAAGGTTGCAAAGAAAAAAATTACA‑TT‑TACCGCCAATGCAGAGCAACTTCTGCAGCCACAGTTTACGGTAGAACAACTACGTGAGCTGGGTATTAAGGTGGATGAAATCCCGGCGCTGGCTGaaa < 1:26379/239‑1 (MQ=255) aTTATGCTGGAAACCACAAAAAGTGG‑TATGCAAACAACCGATCTGTCGCGTTTTTCAAAAAAATAT‑GCACAACTACCAG‑GA‑ACTTATCAGGTTGATATCT‑GGCTGAATAAAAAGAAGGTTTCACAGAAAAAAATTACA‑TT‑TACCGCCAATGCAGAGCAACTTCTGCAGCCACAGTTTACGGTAGAACAACTACGTGAGCTGGGTATTAAGGTGGATGAAATCCCGGCGCTGGCTGaaaa > 1:80549/1‑239 (MQ=255) ttttttaaaaCCA‑AAAAAGTGGTTATGAAAACACCTGTTTTGTCGCGTTTTTAAAAAAAATAC‑GAACATCT‑CCAGACA‑CCATATCAGTGGTATCTCT‑GGGTGAAAAAAAGAAATGTTTAACAAAAAAAATTTACT‑TT‑TACCGCCAATGCAGAGCAACTTCTGCAGCCACAGATTACGGTAGAACAACTACGTGAGCTGGGTATTAAGGTGGATGAAATCCCGGCGCTGGCTGAAAAAGa < 2:212120/232‑1 (MQ=255) cTGGAAACCACAAAAAGTGG‑TATGCAAACAACCGATCTGCCGCGTTTTTCAAAAAAATAT‑GCACAACTACCAG‑GA‑ACTTATCAGGTTGATATCT‑GGCTGAATAAAAAGAAGGTTTCCCAGAAAAAAATTACA‑TT‑TACCGCCAATGCAGAGCAACTTCTGCAGCCACAGTTTACGGTATACCAACTACGTCGCACGGGCATTAAGGTGGATGAAACCCCGACGCTGGCTAAAAAAGATGa > 2:26379/1‑239 (MQ=255) gAAACCACAAAAAGTGG‑TATGCAAACAACCGATCTGTCGCGTTTTTCAAAAAAATAT‑GCACAACTACCAG‑GA‑ACTTATCAGGTTGATATCT‑GGCTGAATAAAAAGAAGGTTTCACAGAAAAAAATTACA‑TT‑TACCGCCAATGCAGAGCAACTTCTGCAGCCACAGTTTACGGTAGAACAACTACGTGAGCTGGGTATTAAGGTGGATGAAATCCCGGCGCTGGCTGaaa > 1:62582/1‑229 (MQ=255) gAAACCACAAAAAGTGG‑TATGCAAACAACCGATCTGTCGCGTTTTTCAAAAAAATAT‑GCACAACTACCAG‑GA‑ACTTATCAGGTTGATATCT‑GGCTGAATAAAAAGAAGGTTTCACAGAAAAAAATTACA‑TT‑TACCGCCAATGCAGAGCAACTTCTGCAGCCACAGTTTACGGTAGAACAACTACGTGAGCTGGGTATTAAGGTGGATGAAATCCCGGCGCTGGCTGAAAAAGATGACGa > 1:429974/1‑239 (MQ=255) gAAACCACAAAAAGTGG‑TATGCAAACAACCGATCTGTCGCGTTTTTCAAAAAAATAT‑GCACAACTACCAG‑GA‑ACTTATCAGGTTGATATCT‑GGCTGAATAAAAAGAAGGTTTCACAGAAAAAAATTACA‑TT‑TACCGCCAATGCAGAGCAACTTCTGCAGCCACAGTTTACGGTAGAACAACTACGTGAGCTGGGTATTAAGGTGGATGAAAACCCGGGGCTGGCTGAAAAAGATGAGGa > 2:1178372/1‑239 (MQ=255) gAAACCACAAAAAGTGG‑TATGCAAACAACCGATCTGTCGCGTTTTTCAAAAAAATAT‑GCACAACTACCAG‑GA‑ACTTATCAGGTTGATATCT‑GGCTGAATAAAAAGAAGGTTTCACAGAAAAAAATTACA‑TT‑TACCGCCAATGCAGAGCAACTTCTGCAGCCACAGTTTACGGTAGAACAACTACGTGAGCTGGGCATTAAGGTGGATGAAATCCCGGCGCTGGCTGAAAAAGATGACGa > 1:994839/1‑239 (MQ=255) gAAACCACAAAAAGTGG‑TATGCAAACAACCGATCTGTCGCGTTTTTCAAAAAAATAT‑GCACAACTACCAG‑GA‑ACTTATCAGGTTGATATCT‑GGCTGAATAAAAAGAAGGTTTCACAGAAAAAAATTACA‑TT‑TACCGCCAATGCAGAGCAACTTCTGCAGCCACAGTTTACGGTAGAACAACTACGTGAGCTGGGAATTAAGGTGGATGAAATCCCGGCGCTGGCTGAAAAAGATGACGa > 1:912760/1‑239 (MQ=255) gAAACCACAAAAAGTGG‑TATGCAAACAACCGATCTGTCGCGTTTTTCAAAAAAATAT‑GCACAACTACCAG‑GA‑ACTTATCAGGTTGATATCT‑GGCTGAATAAAAAGAAGGTTTCACAGAAAAAAATTACA‑TT‑TACCGCCAATGCAGAGCAACTTCTGCAGCCACAGTTTACGGTAGAACAACTACGTGAGCTGGGAATTAAGGTGGATGAAATCCCGGCGCTGGCTGAAAAAGATGACGa > 1:369531/1‑239 (MQ=255) cacaAAAAGTGG‑TATGCAAACAACCGATCTGTCGCGTTTTTCAAAAAAATAT‑GCACAACTACCAG‑GA‑ACTTATCAGGTTGATATCT‑GGCTGAATAAACAGAAGGTTTCACAGAAAAAAATTACA‑TT‑TACCGCCAATGCAGAGCAACTTCTGCAGCCACAGTTTACGGTAGAACACCTACGTGAGCTGGGTTTTAAGGTGGATGAAATCCCGACCCGGGCTGAAAAAAAAGACGATAACg > 2:157114/1‑239 (MQ=255) aaaaaaGTGG‑TAAGCAAGAACCCGATCTGCCCTGTTTTACAAAAAAATAT‑GAACAACTACCAG‑GA‑ATTTATGAGGTTGATATCT‑GGCTGAATAAAAAGAAGGTTTCACAGAAAAAAATTAAA‑TT‑TACCGCCAATGCAGAGCAACTTCTGCAGCCACAGTTTACGGTAGAACAACTACGTGAGCTGGGTATTAAGGTGGATGAAATCCCGGCGCTGGCTGAAAAAGATGACGATAGCGTg < 1:988810/238‑1 (MQ=255) aaaaaaGGGG‑TATGCAAACAACCGATCTGGCGCTTTTTTAAAAAAAATTT‑GCACAACTACCAG‑GA‑ACTTAACAGGTTGATATCT‑GGCTGAAAAAAAAGAAGGTTTCACAAAAAAAAATTACA‑TT‑TACCGCCAATGCAGAGCAACTTCTGCAGCCACAGTTTACGGTAGAACAACTACGTGAGCTGGGTATTAAGGTGGATGAAATCCCGGCGCTGGCTGAAAAAGATGACGATAGCGTg < 1:222783/238‑1 (MQ=255) agggg‑TAAGCAAAACACCGTTTTGTCGCTTTTTAAAAAAAAATAT‑GCCAAACTACCAG‑GA‑ACTTAACAGTTTTATATCT‑GGCGAAATAAAAAGAAGGTTTCAAAAAAAAAAATTACA‑TT‑TACCGCCAATGCAGAGCAACTTCTGCAGCCACAGTTTACGGTAGAACAACTACGTGAGCTGGGTATTAAGGTGGATGAAATCCCGGCGCTGGCTGAAAAAGATGACGATAGCGTGATCaa < 1:683548/236‑1 (MQ=255) agggg‑TAAGAAAACACCCGATCTGTCGCTTTTTTAAAAAAAATAT‑GCACAACTACCAG‑GA‑ACTTATCAGGTTGATATCG‑GGCTGAAAAAAAAGAAGGTTTCACAGAAAAAAATTACA‑TT‑TACCGCCAATGCAGAGCAACTTCTGCAGCCACAGTTTACGGTAGAACAACTACGTGAGCTGGGTATTAAGGTGGAAGAAATCCCGGCGCTGGCTGAAAAAGATGACGATAGCGTGATCaa < 1:339203/236‑1 (MQ=255) g‑TATGCAAACAACCGATCTGTCGCGTTTTTCAAAAAAATAT‑GCACAACTACCAG‑GA‑ACTTATCAGGTTGATATCT‑GGCTGAATAAAAAGAAGGTTTCACAGAAAAAAATTACA‑TT‑TACCGCCAATGCAGAGCAACTTCTGCAGCCACAGTTTACGGTAGAACAACTACGTGAGCTGGGTATTAAGGTGGATGAAATCCCGGCGCTGGCTGAAAAAGATGACGATAGCGTGATCAACtg > 1:838672/1‑237 (MQ=255) tatcaaaaCAACCGATCT‑TTGCGTTTTTTAAAAAAAAGTGGCACAACTACCAG‑GA‑ACTTATCAGGTTGATTTCT‑GGCTGAATAAAAAGAAGGTTACAAAAAAAAAAATTACA‑TT‑TACCGCCAATGCAGAGCAACTTCTGCAGCCACAGTTTACGGTAGAACAACTACGTGAGCTGGGTATTAAGGTGGATGAAATCCCGGCGCTGGCTGAAAAAGATGACGATAGCGTGATCAACTCGc < 1:28127/234‑1 (MQ=255) acaacCGATCTGTCGCGTTTTTCAAAAAAATAT‑GCACAACTACCAG‑GA‑ACTTATCAGGTTGATATCT‑GGCTGCATAAAAAGAAGGTTTCACAGAAAAAAATTACA‑TT‑TACCGCCAATGCAGAGCAACTTCTGCAGCCACAGTTTACGGTAGAACACCTACGTAAGCTGGGTATTCAGGTGGATAAAATCCCGGAGCTGGCTGAAAAGGATGACGATAGCGTGATCAAATCGCTTGaaaa > 2:9011/1‑237 (MQ=255) aacCGATCTGTCGCGTTTTTCAAAAAAATAT‑GCACAACTACCAG‑GA‑ACTTATCAGGTTGATATCT‑GGCTGAATAAAAAGAAGGTTTCACAGAAAAAAATTACA‑TT‑TACCGCCAATGCAGAGCAACTTCTGCAGCCACAGTTTACGGTAGAACAACTACGTGAGCTGGGTATTTAGGTGGATGAAATCCCCGCGCTGGCTGAAAAAGAAGACTATAAGGTGATAAAATCGATTGaaaaaa > 2:1233603/1‑239 (MQ=255) acCGATCTGTCGCGTTTTTCAAAAAAATAT‑GCACAACTACCAG‑GA‑ACTTATCAGGTTGATATCT‑GGCTGAATAAAAAGAAGGTTTCACAGAAAAAAATTACA‑TT‑TACCGCCAATGCAGAGCAACTTCTGCAGCCACAGTTTACGTTATAACACCACCGTGAGCGGGGTATTAAGGTGGATGGAATCCCGGCCAGTGCTGAAAAAAGTGACGATAGCGGGATCAACCAGCTTGAACaaaa > 2:10989/1‑238 (MQ=255) ccGATCTGTGGTGTTTTAAAAAAAAATAT‑GCAAAACAACCAG‑AA‑TCTTATAGGGTTGATATCT‑GGCTGAAAAAAAAGAAGTTTTACAAAAAAAAAATTACA‑TT‑GACCGCCAATGCAGAGCAACTTCTGCAGCCACAGTTTACGGTAGAACAACTACGTGAGCTGGGTATTAAGGTGGATGAAATCCCGGCGCTGGCTGAAAAAGATGACGATAGCGTGATCAACTCGCTTGAACAAATc < 1:977077/239‑1 (MQ=255) cGATCTGTCGCGTTTTTCAAAAAAATAT‑GCACAACTACCAG‑GA‑ACTTATCAGGTTGATATCT‑GGCTGAATAAAAAGAAGGTTTCACAGAAAAAAATTACA‑TT‑TACCGCCAATGCAGAGCAAATTCTGCAGCCACAGTTTACGGTAGAACAACTACGTGAGCTGGGTATTAAGGTGGCTGAAATCTCGGCGATGGCTGAAAAAGATGACGAAAGCGGGATCAAATACCTTGAAAAAAtaa > 2:293587/1‑237 (MQ=255) cTGTCGCGTTTTAAAAAAAAATAT‑GCACAACTACAGG‑GA‑ACTTATCAGGTTGATATCT‑GGCTAAAAAAAAAGAAGGTTTCACAAAAAAAAATTACA‑TT‑TACCGCCAATGCAGAGCAACTTCTGCAGCCACAGTTTACGGTAGAACAACTACGTGAGCTGGGTATTAAGGTGGATGAAATCCCGGCGCTGGCTGAAAAAGATGACGATAGCGTGATCAACTCGCTTGAACAAATCATTcc < 1:1178372/239‑1 (MQ=255) tCGCGTTTTTCAAAAAAATAT‑GCACAACTACCAG‑GA‑ACTTATCAGGTTGATATCT‑GGCTGAATAAAAAGAAGGTTTCACAGAAAAAAATTACA‑TT‑TACCGCCAATGCAGAGCAACTTCTGCAGCCACAGTTTACGGTAGAACAACTACGTGAGCTGGGTATTAAGGTGGATGAAATCCCGGCGCTGGCTGAAAAAGATGACGATAGCGTGATCAACTCGCTTGAACAAATCATTCCCgg > 1:615674/1‑239 (MQ=255) gcgTTTTTCAAAAAAATAT‑GCACAACTACCTG‑GA‑ACTTATCAGGTTGATATCT‑GGCTGAATAAAAAGAAGGTTTCACAGAAAAAAATTACA‑TT‑TACCGCCAATGCAGAGCAACTTCTGAAGCAACAGTTTACGGTAGAACAACTACGTGAACTGGGTATTAAGGTGGATGAAATCCCGGCGCTGCCTGGAAAAGATGACGATACCGGGAGAAACACCCTTGAAAAAACAATCCCCGATa > 2:1012974/1‑239 (MQ=255) ccAG‑GA‑ACTTATCAGGTTGATATCT‑GGCTGAATAAAAAGAAGGTTTCACAGAAAAAAATTACA‑TT‑TACCGCCAATGCAGAGCAACTTCTGCAGCCACAGTTTACGGTAGAACACCTACGTGAGCTGGGTATTAAGGTGGATGAAATCCCGGCGCTGGCTGAAAAAGATGACGATAGCGTGATCAATTCGCTTGAACCAATCATTCCCGGAACCGCTCCTGAATTTGATTTCAatcaca > 2:119039/1‑236 (MQ=255) aagA‑ACTTACAAGTGTGATTTCT‑GGCGAAAAAAAAAGAAAGTTCCACAAAAAATAATTACT‑TT‑AACCGCCAATGCAGAGCATCTTCTGCAGCCACAGTTTACGGTAGAACAACTACGTGAGCAGGGTATTAAGGTGGATGAAATCCCGGCGCAGGCTTAAAGAGATGACGATAGCGTGATCAACTCGCTTGAACAAATCATTCCCGGTACAGCTGCTGAATTTTATTTCAATCATCAGc < 1:135201/237‑1 (MQ=255) aCTTAACAGGTTGAAATCT‑GGCTAAATAAAAAGAAGGTTTCAAAAAAAAAAACTACA‑TT‑TACCGCCAATGCAGAGCAACTTCTGCAGCCACAGTTTACGGTAGAACAACTACGTGAGCTGGGTATTAAGGTGGATGAAATCCCGGCGCTGGCTGAAAAAGATGACGATAGCGTGATCAACTCGCTTGAACAAATCATTCCCGGTACAGCTGCTGAATTTGATTTCAATCATCAGCAACt < 1:1066747/239‑1 (MQ=255) cTTATCAGGTTGATATCT‑GGCTGAATAAAAAGAAGGTTTCACAGAAAAAAATTACA‑TT‑TACCGCCAATGCAGAGCAACTTCTGCAGCCACAGTTTACGGTAGAACAACTACGTGAGCTGGGTATTAAGGTGGATGAAATCCCGGCGCTGGCTGAAAAAGATGACGATAGCGTGATCAACTCGCTTGAACAAATCATTCCCGGTACAGCTGCTGAATTTGATTTCAATCATCAGCAACtt > 1:57590/1‑239 (MQ=255) cTTATCAGGTTGATATCT‑GGCTGAATAAAAAGAAGGTTTCACAGAAAAAAATTACA‑TT‑TACCGCCAATGCAGAGCAACTTCTGCAGCCACAGTTTACGGTAGAACAACTACGTGAGCTGGGTATTAAGGTGGATGAAATCCCGGCGCCGGCTGAAAAAGATGACGATAGCGTGATCAACTCGCTTGaa > 1:269489/1‑188 (MQ=255) ttATCAGGTTGATATCT‑GGCTGAATAAAAAGAAGGTTTCACAGAAAAAAATTACA‑TT‑TACCGCCAATGCAGAGCAACTTCTGCAGCCACAGTTTACGGTAGAACAACTACGTGAGCTGGGTATTAAGGTGGATGAAATCCCGGCGCTGGCTGAAAAAGATGACGATAGCGTGATCAACTCGCTTGACCAAATCATTCCCGGTACAGCTGCTGAATTTGATTTCATTCATCAGCAACTTa > 1:226200/1‑239 (MQ=255) aTCAGGTTGATATCT‑GGCTGAATAAAAAGAAGGTTTCACAGAAAAAAATTACA‑TT‑TACCGCCAATGCAGAGCAACTTCTGCAGCCACAGTTTACGGTAGAACAACTACGTGAGCTGGGTATTAAGGTGGATGAAATCCCGGCGCTGGCTGAAAAAGATGACGATAGCGTGATCAACTCGCTTGAACAAATCATTCCCGGTACAGCTGCTGAATTTGATTTCAATCATCAGCAACTTAAt > 1:571702/1‑239 (MQ=255) tCAGGTTGATATCT‑GGCTGAATAAAAAGAAGGTTTCACAGAAAAAAATTACA‑TT‑TCCCGCCAATGCAGAGCAACTTCTGCAGCCCCAGTTTACGGTAGAACAACAACGTGAGCTGGGTATTAAGGTGGATGAAATCCCGGCGCTGGCTGAAAAAGATGACGCTAGCGTGATCAACTCACTTGAACAAATCATTCCCGGTACAGTCGCTGACTTTGATTTCAATCAACAACAACTTaaat > 2:1289991/1‑237 (MQ=255) gTTGATATCT‑GGCTGAATCAAAAGAAGGATTCACAAAAAAAAATTACA‑TT‑TACCGCCAATGCAGAGCAACTTCTGCAGCCACAGTTTACGGTAGAACAACTACGTGAGCTGGGAATTAAGGTGGACGGAATCCCGGCGCTGGCTGAAACAGATGACGCTAGCGTGATCCACTCGCTTGAACAAATCATATCCGGAACAGCACCTAAATTTGTTTTACAACATACACAACTTAAtttaa > 2:1133520/1‑236 (MQ=255) gATTTCT‑GGCTGAAAAAAAAGAAGGTTTCAAAAAAAAAAATTCCA‑TT‑TACCGCCAATGCAGAGCAACTTCTGCAGCCACAGTTTACGGTAGAACAACTACGTGAGCTGGGTATTAAGGTGGATGAAATCCCGGCGCTGGCTGAAAAAGATGACGATAGCGTGATCAACTCGCTTGAACAAATCATTCCCGGTACAGCTGCTGAATTTGATTTCAATCATCAGCAACTTAATTTGAGCAt < 1:1013698/239‑1 (MQ=255) gATATTT‑GGCGAAAAAAAAAGAAGGTTACAGGAAAAAAAATTCAT‑TT‑TACCGCCAATGCAGAGCAACTTATGCAGCCACAGTTTACGGTAGAACAACTACGTGAGCTGGGTATTAAGGTGGATGAAATCCCGGCGCTGGCTGAAAAAGATGACGATAGCGTGATCAACTCGCTTGAACAAATCATTCCCGGTACAGCTGCTGAATTTGATTTCAATCATCAGCAACTTAATTTGAGCAt < 1:533508/239‑1 (MQ=255) gATATCT‑GGCTGAATAAAAAGAAGGTTTCACAGAAAAAAATTACA‑TT‑TACCGCCAATGCAGAGCAACTTCTGCAGCCACAGTTTACGGTAGAACAACTACGTGAGCTGGGTATTAAGGTGGATGAAATCCCGGCGCTGGCTGAAAAAGATGATGATAGCGTGATCAACTCGCTTGAACAAATCATTCCCGGTACAGCTGCTGAATTTGATTTCAATCATCAGCAAATTAATTTGAGCAt > 1:92317/1‑239 (MQ=255) gATATCT‑GGCTGAATAAAAAGAAGGTTTCACAGAAAAAAATTACA‑TT‑TACCGCCAATGCAGAGCAACTTCTGCAGCCACAGTTTACGGTAGAACAACTACGTGAGCTGGGTATTAAGGTGGATGAAATCCCGGCGCTGGCTGAAAAAGATGACGATAGCGTGATCAACTCGCTTGAACAAATCATTCCCGGTACAGCTGCTGAATTTGATTTCAATCATCAGCAACTTAATTTGAGCAt > 1:866971/1‑239 (MQ=255) ctgtggcaaaaTAAAAAAAATTTTTCAAAAAAAAAAATTTCA‑TT‑TCCCCCCAATGCAGGGCAACTTCTGCAGCCACAGTTTACGGTAGAACAACTACGTGAGCTGGGTATTAAGGTGGATGAAATCCCGGCGCTGGCTGAAAAAGATGACGATAGCGTGATCAACTCGCTTGAACAAATCATTCCCGGTACAGCTGCTGAATTTGATTTCAATCATCAGCAACTTAATTTGAGCATTcc < 2:80549/230‑1 (MQ=255) ggCTGAATAAAAAGAAGGTTTCACAGAAAAAAATTACA‑TT‑TACCGCCAATGCAGAGCAACTTCTGCAGCCACAGTTTACGGTAGAACAACTACGTGAGCTGGGTATTAAGGTGGATGAAATCCCTGCGCTGGCTGACAAAGCTGACGATAACGTGATCAACTCCCCTGACAAAATCATCACCGGTACCGCTCCTGAATTTGTTTTCAATAATCAGCAACTAAATTTGAGAATTCCCCaa > 2:657605/1‑239 (MQ=255) ggCTGAATAAAAAGAAGGTTTCACAGAAAAAAATTACA‑TT‑TACCGCCAATGCAGAGCAACTTCTGCAGCCACAGTTTACGGTAGAACAACTACGTGAGCTGGGTATTAAGGTGGATGAAATCCCGGCGCTGGCTGAAAAAGATGACGATAGCGTGATCAACTCGCTTGAACAAATCATTCCCGGTACAGCTGCTGAATTTGATTTCAATCATCAGCAACTTAATTTGAGCATTCCCCaa > 1:916049/1‑239 (MQ=255) ggCTGAATAAAAAGAAGGTTTCACAGAAAAAAATTACA‑TT‑TACCGCCAATGCAGAGCAACTTCTGCAGCCACAGTTTACGGTAGAACAACTACGTGAGCTGGGTATTAAGGTGGATGAAATCCCGGCGCTGGCTGAAAAAGATGACGATAGCGTGATCAACTCGCTTGAACAAATCATTCCCGGTACAGCTGCTGAATTTGATTTCAATCATCAGCAACTTAATTTGAGCATTCCCCaa > 1:610042/1‑239 (MQ=255) tgtaaaaaaaaaGAAGGTTTAAAAAAAAAAAATTATA‑TT‑TTCCGACCATGCAAGGCAACTTTTGCAGCCACAGTTTACGGGAGGAAAACTTCGGGAGTTGGGTATTAAGGTGGATGAAATCCCGGCGCTGGCTGAAAAAGATGACGATAGCGTGATCAACTCGCTTGAACAAATCATTCCCGGTACAGCTGCTGAATTTGATTTCAATCATCAGCATCTTAATTTGAGCATTCCCCaaa < 1:1257114/232‑1 (MQ=255) ctaaaaaaaaaGAAGGTTTCACAAAAAAAAATTACA‑TT‑TACCGCCAATGCAGAGCAACTTCTGCAGCCACAGTTTACGGTAGAACAACTACGTGAGCTGGGTATTAAGGTGGATGAAATCCCGGCGCTGGCTGAAAAAGATGACGATAGCGTGATCAACTCGCTTGAACAAATCATTCCCGGTACAGCTGCTGAATTTGATTTCAATCATCAGCAACTTAATTTGAGCATTCCCCaaa < 1:1303974/232‑1 (MQ=255) atGAATAAAAAGAAGGTTACCCAGAAAAAAATTACA‑TT‑TACCGCCAATGCAGAGCAACTTCTGCAGCCACAGTTTACGGTAGAACAACTACGTGAGCTGGGTATTAAGGTGGATGAAATCCCGGCGCTGGCTGAAAAAGATGACGATAGCGTGATCAACTCGCTTGAACAAATCATTCCCGGTACAGCTGCTGAATTTGATTTCAATCATCAGCAACTTAATTTGAGCATTCCCCaaa < 1:374074/237‑1 (MQ=255) gAATAAAAAGAAGGTTTCACAGAAAAAAATTACA‑TT‑TACCGCCAATGCAGAGCAACTTCTGCAGCCAAAGTTTACGGTAGAACAACTCCGTGAGCTGGGTATTAAGGTGGAGGAAATCCGGGCGCTGGCTGAAAAAGCTGACGATAGCGGGTTAACATCGCTTAAACAAATCATTCCCGGTAACCCGGCTAAATTGTTTTTCAATCATCAACAACTTAATTTCA‑CAATCCCCAAAATgg > 2:684978/1‑238 (MQ=255) aaaaaaaaaGAAGGTTTCACA‑AAAAAAATTTCATTT‑TCCCGCCAATGCAGAGCAACTTCTGCAGCCACAGTTTACGGTAGAACAACTACGTGAGCTGGGTATTAAGGTGGATGAAATCCCGGCGCTGGCTGAAAAAGATGACGATAGCGTGATCAACTCGCTTGAACAAATCATTCCCGGTACAGCTGCTGAATTTGATTTCAATCATCAGCAACTTAATTTGAGCATTCCCCAAATTg < 2:866971/235‑1 (MQ=255) actAAAAAGAAGGAATCACAGTAAAAAATTACA‑TT‑TACCGCCAATGCAGAGAAAATTCTGCAGCCACAGTTTACGGTAGAACAACTACGTGAGATGGGTATTAAGGTGGCTGAAATGATGGCGCAGGCTGAAAAATATGACGATATCGTTATCGACTCGCTTGCACAACACCTACCAGGTACAGCTGCTGAATGAGATTTCCATCATCAGAAAATTAATTTAGCCATTCCCCAAATTga > 2:1093818/3‑238 (MQ=255) aaaaaaaaaGAGGTTTCAAAAAAAAAAAATTCA‑TTGTACCGCCAATGCAGAGCAACTTCTGCAGCCACAGTTTACGGTAGAACAACTACGTGAGCTGGGTATTAAGGTGGATGAAATCCCGGCGCTGGCTGAAAAAGATGACGATAGCGTGATCAACTCGCTTGAACAAATCATTCCCGGTACAGCTGCTGAATTTGATTTCAATCATCAGCAACTTAATTTGAGCATTCCCCAAAtt < 1:1140211/235‑1 (MQ=255) aaTAAAAAGAAGGTTTCACAGAAAAAAATTACA‑TT‑TACCGCGAATGCAGAGCAACTTCTGCAGCCACAGTTTAAGGTAGAACAAATACGTGAGCTGGGTATTAAGGTGGATGAAATCCCGGCGCTGGCTGAAAAAGCTGACGCTAGCGAGATAAACTCGCTTGACCAAATCATTCCCGCTACAGCTGCTGAATTTGATTTCAGACATTAGCAATTAATTTTTGGCATTCCCAAAATTGc > 2:182101/1‑239 (MQ=255) aaTAAAAAGAAGGTTTCACAGAAAAAAATTACA‑TT‑TACCGCCAATGCAGAGCAACTTCTGCAGCCACAGTTTACGGTAGAACAACTACGTGAGCTGGGTATTAAGGTGGATGAAATCCCGGCGCTGGCTGAAAAAGATGACGATAGCGTGATCAACTCGCTTGAACAAATCATTCCCGGTACAGCTGCTGAATTTGATTTCAATCATCAGCAACTTAATTTGAGCATTCCCCAAATTGc > 1:105885/1‑239 (MQ=255) aaTAAAAAGAAGGTTTCACAGAAAAAAATTACA‑TT‑TACCGCCAATGCAGAGCAACTTCTGCAGCCACAGTTTACGGTAGAACAACTACGTGAGCTGGGTATTAAGGTGGATGAAATCCCGGCGCTGGCTGAAAAAGATGACGATAGCGTGATCAACTCGCTTGAACAAATCATTCCCGGTACAGCTGCTGAATTTGATTTCAATCATCAGCAACTTAATTTGAGCATTCCCCAAATTGc > 1:463058/1‑239 (MQ=255) aTAAAAAGAAGTTTTCACAGAAAAAACTTACA‑TT‑TACCGCCAATGCAGAGCAACTTCTGCAGCCACAGTTTACGGTAGAACAACTACGTGAGCTGGGTATTAAGGTGGATGAAATCCCGGCGCTGGCTGAAAAAGATGACGATAGCGTTATCAACTCGCTTGAACAAATCATTCCCGGTACAGCTGCTGAATTTGATTTCAATCATCAGCAACTTAATTTGAGCATTCCCCAAATTGCa < 1:315655/239‑1 (MQ=255) aatttttCAAAAAAAAAATTTACT‑TT‑AACCCGCAATGCAGGGACACTTCTGCAGCCAAAGGTTACGGTAGAACAAATACGGGAGCTGGGTAATAAGGTGGATGAAATCCCGGCGCTGGCTGAAAAAGATGACGATAGCGTGATCAACTCGCTTGAACAAATCATTCCCGGTACAGCTGCTGAATTTGATTTCAATCATCAGCAACTTAATTTGAGCATTCCCCAAATTGCACTGTACCg < 2:1282493/235‑1 (MQ=255) agGTTTCACAGAAAAAAATTACA‑TT‑TACCGCCAATGCAGAGCAACTTCTGCAGCCACAGTTTACGGTAGAACAACTACGTGAGCTGGGTATTAAGGTGGATGAAATCCCGGCGCTGGCTGAAAAAGATGACGATAGCGTGATCAACTCGCTTGAACAAATCATTCCCGGTACAGCTGCTGAATTTGATTTCAATCATCAGCAACTTAATTTGAg > 1:631990/1‑214 (MQ=255) agGTTTCACAGAAAAAAATTACA‑TT‑TACCGCCAATGCAGAGCAACTTCTGCAGCCACAGTTTACGGTAGAACAACTACGTGAGCTGGGTATTAAGGTGGATGAAATCCCGGCGCTGGCTGAAAAAGATGACGATAGCGTGATCAACTCGCTTGAACAAATCATTCCCGGTACAGCTGCTGAATTTGATTTCAATCATCAGCAACTTAATTTAAGCATTCCCCAAATTGCACTGTACCGt > 1:749900/1‑239 (MQ=255) agGTTTCACAGAAAAAAATTACA‑TT‑TACCGCCAATGCAGAGCAACTTCTGCAGCCACAGTTTACGGTAGAACAACTACGTGAGCTGGGTATTAAGGTGGATGAAATCCCGGCGCTGGCTGAAAAAGATGACGATAGCGTGATCAACTCGCTTGAACAAATCATTCCCGGTACAGCTGATGAATTTGATTTCAATCATCAGAAACTTAATTTGAGAATTCCCCAAATTGAACTTTaactt > 2:561712/1‑235 (MQ=255) agGTTTCACAGAAAAAAATTACA‑TT‑TACCGCCAATGCAGAGCAACTTCTGCAGCCACAGTTTACGGTAGAACAACTACGTGAGCTGGGTATTAAGGTGGATGAAATCCCGGCGCTGGCTGAAAAAGATGACGATAGCGTGATCAACTCGCTTGAACAAACAATTCCCGGTACAGCTGCTGCATTTGATTCCAATCATAAGCAACTAAACTTGCGCATTCCCCAAATTGCACTTTCCCg > 2:117249/1‑238 (MQ=255) ggTTTCACAGAAAAAAATTACA‑TT‑TACCGCCAATGCAGAGCAACTTCTGCAGCCACAGTATACGGTAGAACAACTACGTGAGCTGGGTATTAAGGTGGATGAAATCCCGGCGCTGGCTGAAAAAGTTGACGATAGCGTGATCAACTCGCTTGAACAAATCATTCCCGGTACAGCTGCTGAATTTGATTTCAATATTCAGCAACTTAATTTGAGACTTCCCCAAATTGCACTGAACCGTg > 1:567618/1‑239 (MQ=255) ttCACAGAAAAAAATTACA‑TT‑TACCGCCAATGCAGAGCAACTTCTGCAGCCACAGTTTACGGTAGAACAACTACGTGAGCTGGGTATTAAGGTGGATGAAATCCCGGCGCTGGCTGAAAAAGCTGACGTTAGCGTGATCAACTCGCTTGAACAAATCATTCCCGGTACAGCTGCTGAATTTGATTTCAATCATCAGCAACTTAATTTGAACATTCCCCAAATTGAACTGAACCGTGagg > 2:30975/1‑237 (MQ=255) | CGCACACCGAAACAGTTGGCGCTCATCATCAAACGTTGTTTGCCGATGGTGCTCACTGGCAGCGGCATGCTTTGCACTACCGCTAACGCCGAAGAGTATTATTTCGACCCCATTATGCTGGAAACCACAAAAAGTGG‑TATGCAAACAACCGATCTGTCGCGTTTTTCAAAAAAATAT‑GCACAACTACCAG‑GA‑ACTTATCAGGTTGATATCT‑GGCTGAATAAAAAGAAGGTTTCACAGAAAAAAATTACA‑TT‑TACCGCCAATGCAGAGCAACTTCTGCAGCCACAGTTTACGGTAGAACAACTACGTGAGCTGGGTATTAAGGTGGATGAAATCCCGGCGCTGGCTGAAAAAGATGACGATAGCGTGATCAACTCGCTTGAACAAATCATTCCCGGTACAGCTGCTGAATTTGATTTCAATCATCAGCAACTTAATTTGAGCATTCCCCAAATTGCACTGTACCGTGATG > NC_000913/3288844‑3289312 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |