| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 3,480,296 | T→C | 21.1% | G104G (GGA→GGG) | kefB ← | potassium:proton antiporter |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 3,480,296 | 0 | T | C | 21.1% | 169.1 / 6.0 | 76 | G104G (GGA→GGG) | kefB | potassium:proton antiporter |
| Reads supporting (aligned to +/- strand): ref base T (48/8); new base C (2/16); total (50/26) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.26e-08 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
ACCTTCATCCAGTCGAAATGTTCGTCTGCCGACCCCGCCAACAACGGCACTAACGCCAGTGCTGGGATTACTGCCAGATCCTGAAACAGCAGAACCGAAAACCCGAGCTGGCCGGATTCGCTGCGATTCATCCCTTTCTCACGCATCA‑ATTGCAACGCCATTGCAGTTGAAGACATCGCAAGGCCAATGCCACCGACCACCGCCGCCTGCCAGGCGAAATCCGTCAGCATCAATAAT‑CCCGCCAGCAACGCCGCGCTTAACAGCA‑CCTGTGCCGCGCCTACGCCAAAAATCGAACGCCGCAGTTGCCAAAGTTTGGAGGGATTCAACTCAAGGCCGATGATAAACATCAGGAATACCACGCCGAGTTCCGAAAAGTGGAGGATCTCATCGACGTCGCTAATAAACCCCAGCCCCCACGGGCCAATTGCAATCCCTGCCAGCAAATATCCCAACACAGCGC > NC_000913/3480060‑3480519 | aCCTTCATCCAGTCGAAATGTTCGTCTGCCGACCCCGCCAACAACGGCACTAACGCCAGTGCTGGGATTACTGCCAGATCCTGAAACAGCAGAACCGAAAACCCGAGCTGGCCGGATTCGCTGCGATTCATCCCTTTCTCACGCATCA‑ATTGCAACGCCATTGCCGTTGAAGACATCGCAAGGCCAATGCCACCAACCACCGCCGCCTGCCAGGCGAAATCCGTCAGCATCAAAAAT‑c > 1:984138/1‑238 (MQ=255)aCCTTCATCCAGTCGAAATGTTCGTCTGCCGACCCCGCCAACAACGGCACTAACGCCAGTGCTGGGATTACTGCCAGATCCTGAAACAGCAGAACCGAAAACCCGAGCTGGCCGGATTCGCTGCGATTCATCCCTTTCTCACGCATCA‑ATTGCAACGCCATTGCAGTTGAAGACATCGCAAGGCCAATGCCACCGACCACCGCCGCCTGCCAGGCGAAATCCGTCACCATCAATAAT‑c > 1:947338/1‑238 (MQ=255)aCCTTCATCCAGTCGAAATGTTCGTCTGCCGACCCCGCCAACAACGGCACTAACGCCAGTGCTGGGATTACTGCCAGATCCTGAAACAGCAGAACCGAAAACCCGAGCTGGCCGGATTCGCTGCGATTCATCCCTTTCTCACGCATCA‑ATTGCAACGCCATTGCAGTTGAAGACATCGCAAGGCCAATGCCACCGACCACCGCCGCCTGCAAGCGGAAATCCGTCAGCATCAATAAT‑c > 1:44162/1‑238 (MQ=255) aTCCAGTCGAAATGTTCGTCTGCCGACCCCGCCAACAACGGCACTAACGCCAGTGCTGGGATTACTGCCAGATCCTGAAACAGCAGAACCGAAAACCCGAGCTGGCCGGATTCGCTGCGATTCATCCCTTTCTCACGCATCA‑ATTGCAACGCCATTGCAGTTGAAGACATCGCAAGGCCAATGCCACCGACCACCGCCGCCTGCCAGGCGAAATCCGTCAGCATCAATAAT‑CCCGCCa > 1:587663/1‑238 (MQ=255) tCGAAATGTTCGTCTGCCGACCCCGCCAACAACGGCACTAACGCCAGTGCTGGGATTACTGCCAGATCCTGAAACAGCAGAACCGAAAACCCGAGCTGGCCGGATTCGCTGCGATTCATCCCTTTCTCACGCATCA‑ATTGCAACGCCATTGCAGTTGAAGACATCGCAAGGCCAATGCCACCGCCCACCGCCGCCTGCCAGGCGAAACCCGCCAGCATCAATAAT‑CCCGCCAGCAAcg > 2:813364/1‑238 (MQ=255) tCGAAATGTTCGTCTGCCGACCCCGCCAACAACGGCACTAACGCCAGTGCTGGGATTACTGCCAGATCCTGAAACAGCAGAACCGAAAACCCGAGCTGGCCGGATTCGCTGCGATTCATCCCTTTCTCACGCATCA‑ATTGCAACGCCATTGCAGTTGAAGACATCGCAAGGCCAATGCCACCGACCACCGCCGCCTGCCAGGCGAAATCCGTCAGCATCAATAAT‑CCCGCCAGCAAcg > 1:1046092/1‑238 (MQ=255) tGCCGACCCCGCCAACAACGGCACTAACGCCAGTGCTGGGATTACTGCCAGATCCTGAAACAGCAGAACCGAAAACCCGAGCTGGCCGGATTCGCTGCGATTCATCCCTTTCTCACGCATCA‑ATTGCCACGCCATTGCAGTTGAAGCCATCGCAAGGCCAATGCCACCGACCACCGCCGCCTGCCAGGCGAAAACCGTCATCATCAATAAT‑CCCGCCAGCAACCCCGCGCTTAAAAga > 1:485755/1‑237 (MQ=255) cGCCAACAACGGCACTAACGCCAGTGCTGGGCTTACTGCCAGATCCTGAAACAGCAGCACCGACAACCCGAGCTGGCCTGATTCGCTGCGATTCATCCCTTTCTCACGCATCA‑ATTGCAACGCCATTGCAGTTGAAGACATGGCAATGCCAATGCCACCGCCCACCGCCGCCTGCCAGGCCAAATCCGCCCGCATCCATACT‑CCCGCCTGCCACCACGCGCTT‑ACAGCACCCTGTGcc > 2:802850/1‑238 (MQ=255) cGCCAACAACGGCACTAACGCCAGTGCTGGGATTACTGCCAGATCCTGAAACAGCAGAACCGAAAACCCGAGCTGGCCGGATTCGCTGCGATTCATCCCTTTCTCACGCATCA‑ATTGCAACGCCATTGCAGTTGAAGACATCGCAAGGCCAATGCCACCGACCACCGCCGCCTGCCAGCCGAAATCCGTCAGCATCAATAAT‑CCCGCCAGCAACGCCGCGCTTAACAGCA‑CCTGTGcc > 1:1073417/1‑238 (MQ=255) cACTAACGCCAGTGCTGGGATTACTGCCAGATCCTGAAACAGCAGAACCGAAAACCCGAGCTGGCCGGATTCGCTGCGATTCATCCCTTTCTCACGCATCA‑ATTGCAACGCCATTGCAGTTGAAGACATCGCAAGGCCAATGCCACCGACCACCGCCGCCTGCCAGGCGAAATCCGTCAGCATCAATAAT‑CCCGCCAGCAACGCCGCGCTTAACAGCA‑CCTGTGCCGCGCCTACGccca > 1:689662/1‑237 (MQ=255) cACTAACGCCAGTGCTGGGATTACTGCCAGATCCTGAAACAGCAGAACCGAAAACCCGAGCTGGCCGGATTCGCTGCGATTCATCCCTTTCTCACGCATCA‑ATTGCAACGCCATTGCAGTTGAAGACATCGCAAGGCCAATGCCACCGACCACCGCCGCCTGCCAGGCGAAATCCGTCAGCATCAATAAT‑CCCGCCAGCAACGCCGCGCTTAACAGCA‑CCTGTGCCGCGCCTACCCCaa > 1:850619/1‑239 (MQ=255) cACTAACGCCAGTGCTGGGATTACTGCCAGATCCTGAAACAGCAGAACCGAAAACCCGAGCTGGCCGGATTCGCTGCGATTCATCCCTTTCTCACGCATCA‑ATTGCAACGCCATTGCAGTTGAAGACATCGCAAGGCCAATGCCACCGACCACCGCCGCCTGCCAGGCGAAATCCGTCAGCATCAATAAC‑CCCGCCAGCAACCCCGCGCTTAACAGCA‑CCCTTACCGCGCCCACCCCaa > 2:750085/1‑239 (MQ=255) aGTGCTGGGATTACTGCCAGATCCTGAAACAGCAGAACCGAAAACCCGAGCTGGCCGGATTCGCTGCGATTCATCCCTTTCTCACGCATCA‑ATTGCAACGCCATTGCAGTTGAAGACATCGCAAGGCCAATGCCACCGACCACCGCCCCCTGCCAGGCGAAATCCGTCAGCATCAATAAT‑CCCGCCCGCAACCCCCCGCTTAACACCC‑CCTGTCCCCCCCCTCCCCCaaaaacggaag > 2:871708/1‑232 (MQ=255) aGTGCTGGGATTACTGCCAGATCCTGAAACAGCAGAACCGAAAACCCGAGCTGGCCGGATTCGCTGCGATTCATCCCTTTCTCACGCATCA‑ATTGCAACGCCATTGCAGTTGAAGACATCGCAAGGCCAATGCCACCGACCACCGCCCCCTGCCAGGCGAAAACCGTCCGCCTCCATAAT‑CCCCCCAGCAACCCCCCCCTATAAACAA‑CCCGTCCCCCGCCCACCACAAAAACCGaaa > 2:871707/1‑237 (MQ=255) gggATTACTGCCAGATCCGAAAACAGCAGAACCGAAAACCCGAGCTGGCCGGATTCGCTGGGATTCATCCCTTTCCCCCCCATCA‑ATTGCAACGCCATTGCAGTTGAAGACATCGCAAGGCCAATGCCACCGACCACCGCCGCCTGCCAGGCGAAATCCGTCAGCATCAATAAT‑CCCGCCAGCAACGCCGCGCTTAACAGCA‑CCTGTGCCGCGCCTACGCCAAAAATCGAACGCCGCa < 1:1106405/238‑1 (MQ=255) aCTGCCAGATCCTGAAACAGCAGAACCGAAAACCCGAGCTGGCCGGATTCGCTGCGATTCATCCCTTTCTCACGCATCA‑ATTGCAACGCCATTGCAGTTGAAGACATCGCAAGGCCAATGCCACCGACCACCGCCGCCTGCCAGGCGCAATCCGTCAGCATCAATAAC‑CCCGCCCGCAACGCCCCGCTTAACACCA‑CCCGTGCCCCCCCTCCCCCAAAAAAACAACGCCGCaatggcaa > 2:1277304/1‑232 (MQ=255) aCTGCCAGATCCTGAAACAGCAGAACCGAAAACCCGAGCTGGCCGGATTCGCTGCGATTCATCCCTTTCTCACGCATCA‑ATTGCAACGCCATTGCAGTTGAAGACATCGCAAGGCCAATGCCACCGACCACCGCCGCCTGCCAGGCGAAATCCGTCAGCATCAATAAT‑CCCGCCAGCAACGCCGCGCTTaa > 1:1139896/1‑191 (MQ=255) aCTGCCAGATCCTGAAACAGCAGAACCGAAAACCCGAGCTGGCCGGATTCGCTGCGATTCATCCCTTTCTCACGCATCA‑ATTGCAACGCCATTGCAGTTGAAGACATCGCAAGGCCAATGCCACCGACCACCGCCGCCTGCCAGGCGAAATCCGTCAGCATCAATAAT‑CCCGCCAGCAACGCCGCGCTTAACAGCA‑CCTGTGCCGCGCCTACGCCAAAAATCGAACGCCGCAGTTGCCa > 1:913652/1‑239 (MQ=255) aCTGCCAGATCCTGAAACAGCAGAACCGAAAACCCGAGCTGGCCGGATTCGCTGCGATTCATCCCTTTCTCACGCATCA‑ATTGCAACGCCATTGCAGTTGAAGACATCGCAAGGCCAATGCCACCGACCACCGCCGCCTGCCAGGCGAAATCCGTCAGCATCAATAAT‑CCCGCCAGCAACGCCGCGCTTAACAGCA‑CCTGTGCCGCGCCTACGCCAAAAATCGAACGCCGCACTTGCCa > 1:1005936/1‑239 (MQ=255) aCTGCCAGATCCTGAAACAGCAGAACCGAAAACCCGAGCTGGCCGGATTCGCTGCGATTCATCCCTTTCTCACGCATCA‑ATTGCAACGCCATTGCAGTTGAAGACATCGCAAGGCCAATGCCACCGACCACCGCCGCCTGCCAGGCGAAATCCGTCAGCATCAATAAT‑CCCGCCAGCAACGCCGCGCTTAACAGCA‑CCTGTGCCGCGCCTACGCCAAAAATCGAACACCGCAGTTGccc > 1:1098079/1‑238 (MQ=255) gATCCTGAAACAGCAGAACCGAAAACCCGAGCTGGCCGGATTCGCTGCGATTCATCCCTTTCTAAAGCATCA‑ATTGCAACGCCATTGCAGTTGAAGACATCCCAAGGCCAATGCCCCCGACCACCGCACCCTGCGAGGCGAAATCCGTCAGCATCAAAAAT‑CCCGCACCCAACGCCGCGCTTCAACGCA‑CCTGTGCCGCCCCAACCCCAGAAAACGAACCCCTCACttcgaaaaatgtg > 2:1074367/1‑228 (MQ=255) aaaCAGCAGAACCGAAAACCCGAGCTGGCCGGATTCGCTGCGATTCATCCCTTTCTCACGCATCA‑ATTGCAACGCCATTGCAGTTGAAGACATCGCAAGGCCAATGCCACCGACCACCGCCGCCTGCCAGGCGAAATCCGTCAGCATCAATAAT‑CCCGCCAGCAACGCCGCGCTTAACAGCA‑CCTGTGCCGCGCCTACGCCAAAAATCGAACGCCGCAGTTGCCAAAGTTTGGAGGGAt > 1:855497/1‑239 (MQ=255) aaCAGCAAACCCGAAAGCCCGAGCTGGCCGGATTCGCTGCGATTCACCCCTTTCCCCCGCATCA‑ATTGCACCGCCATTGCAGTTGAAGACATCGCAAGGCCAATGCCACCGACCACCGCCGCCTGCCAGGCGAAATCCGTCAGCATCAATAAT‑CCCGCCAGCAACGCCGCGCTTAACAGCA‑CCTGTGCCGCGCCTACGCCAAAAATCGAACGCCGCAGTTGCCAAAGTTTGGAGGGAtt < 1:413310/239‑1 (MQ=255) cagAACCGAAAACCCGAGCTGGCCGGATTCGCTGCGATTCATCCCTTTCTCACGCATCA‑ATTGCAACGCCATTGCAGTTGAAGACATCGCAAGGCCAATGCCACCGACCACCGCCGCCTGCCAGGCGAAATCCGTCAGCATCAATAAT‑CCCGCCAGCAACGCCGCGCTTAACAGCA‑CCTGTGCCGCGCCTACGCCAAAAATCGAACGCCGCAGTTGCCAAAGTTTGGAGGGATTCAAc > 1:1254538/1‑238 (MQ=255) cagAACCGAAAACCCGAGCTGGCCGGATTCGCTGCGATTCATCCCTTTCTCACGCATCA‑ATTGCAACGCCATTGCAGTTGAAGACATCGCAAGGCCAATGCCACCGACCACCGCCGCCTGCCAGGCGAAATCCGTCAGCATCAATAAT‑CCCGCCAGCAACGCCGCGCTTAACAGCA‑CCTGTGCCGCGCCTACGCCAAAAATCGAACCCCGCAGTTGCCAAAGTTTGGAGGGATTCAAc > 1:201924/1‑238 (MQ=255) caaccacaaaaCCCGGGGTGGCCGGTTTCTGTCGTATTCATCCCCTTCCCACCCACCA‑ATTGCAACCCCATTAGAGTGGAAACCACCGCAAGCCAAATGCCACCGCCCCCCGCCGCCTGCAGGGCGAAATCCGCCAGAATCAATAAT‑CCCGCCAGCAACGCCGCGCTTAACAGCA‑CCTGTGCCGCGCCTACGCCAAAAATCGAACGCCGCAGTTGCCAAAGTTTGGAGGGATTCAACTc < 2:587663/232‑1 (MQ=255) gAACCGAAAACCCGAGCTGGCCGGATTCGCTGCGATTCATCCCTTTCTCACGCATCA‑ATTGCAACGCCATTGCAGTTGAAGACATCGCAAGGCCAATGCCACCGACCACCGCCGCCTGCCAGGCGAAATCCGTCAGCATCAATAAT‑CCCGCCAGCAACGCCGCGCTTAACAGCA‑CCTGTGCCGCGCCTACGCCAAAAATCGAACGCCGACGTAGCCAAAGATTGGAGGGATTCAACTCa > 1:876977/1‑239 (MQ=255) ccaaacCCCTAGCTGGCGGGATTCGCGTCGTTCCACCCCTTTCTCCCGC‑TCACATTGCAACCCCGTTGACGTGGAAGACCTCGCAAGGCCCATCCCCCCGACCACCGCCGCCCGCCAGGCAAACTCCGTCAGCATCAATAAC‑CCCGCCAGCAACGCCGCGCTTAACAGCA‑CCTGTGCCGCGCCTACGCCAAAAATCGAACGCCGCAGTTGCCAAAGTTTGGAGGGATTCAACTCAAGGc < 2:947338/237‑1 (MQ=255) gCCGGATTCGCTGCGATTCATCCCTTTCTCACGCATCA‑ATTGCAACGCCATTGCAGTTGAAGACATCGCAAGGCCAATGCCACCGACCACCGCCGCCTGCCAGGCGAAATCCGTCAGCATCAATAAT‑CCCGCCAGCAACGCCGCGCTTAACAGCA‑CCTGTGCCGCGCCTACGCCAAAAATCGAACGCCCCAGTTGCCAAAGTTTGGCGGGGTTCAACTCAGGGCCGTTGATAAACATCa > 1:1080270/1‑239 (MQ=255) tCGCTGCGATTCATCCCTTTCTCACGCATCA‑ATTGCAACGCCATTGCAGTTGAAGACATCGCAAGGCCAATGCCACCGACCACCGCCGCCTGCCAGGCGAAATCCGTCAGCATCAATAAT‑CCCGCCAGCAACGCCGCGCTTAACAGCA‑CCTGTGCCGCGCCTACGCCAAAAATCGAACGCCGCAGTTGCCAAAGTTTGGAGGGATTCAACTCAAGGCCGATGATAAACATCAGGAATa > 1:701213/1‑238 (MQ=255) aTTCATCCCTTTCTCACGCATCA‑ATTGCAACGCCATTGCAGTTGAAGACATCGCAAGGCCAATGCCACCGACCCCCGCCGCCTGCCAGGCGAAATCCGTCAGCATCAATAAT‑CCCGCCAGCAACGCcgcg < 1:950134/130‑1 (MQ=255) aTTCATCCCTTTCTCACGCATCA‑ATTGCAACGCCATTGCAGTTGAAGACATCGCAAGGCCAATGCCACCGACCACCGCCGCCTGCCAGGCGAAATCCGTCAGCATCAATAAT‑CCCGCCAGCAACGCcgcg > 2:950134/1‑130 (MQ=255) tttcccccccATCA‑ATTCCAACCCACTTGCAGTTGAAGACACCCCAAGGCCAATGCCCCCCACCGCCGCCGCCTGCCAGGCGAAATCCGTCAGCATCAATAAC‑CCCGCCAGCAACGCCGCGCTTAACAGCA‑CCTGTGCCGCGCCTACGCCAAAAATCGAACGCCGCAGTTGCCAAAGTTTGGAGGGATTCAACTCAAGGCCGATGATAAACATCAGGAATACCACGCCGAGTTCCGcaa < 1:715009/230‑1 (MQ=255) tctcACGCATCA‑ATTGCAACGCCATTGCAGTTGAAGACATCGCAAGGCCAATGCCACCGACCACCGCCGCCTGCCAGGCGAAATCCGTCAGCATCAATAAT‑CCCGCCAGCAACGCCGCGCTTAACAGCA‑CCTGTGCCGCGCCTACGCCAAAAATCGACCGCCGCAGTTGCCAAAGTTTGGAGGGCTTCAACTCAGGGCCGTTGCTAAACATCAGGAATACCACGCCGAGTTCCGaaaaa > 1:939300/1‑238 (MQ=255) tctcACGCATCA‑ATTGCAACGCCATTGCAGTTGAAGACATCGCAAGGCCAATGCCACCGACCACCGCCGCCTGCCAGGCGAAATCCGTCAGCATCAATAAT‑CCCGCCAGCAACGCCGCGCTTAACAGCA‑CCTGTGCCGCGCCTACGCCAAAAATCGAACGCCGCAGTTGCCAAAGTTTGGAGGGATTCACCTCAAGGCCGAGGATAAACATCAGGAATACCACCCCGAGTTCCGaaact > 1:680983/1‑237 (MQ=255) tctcACGCATCA‑ATTGCAACGCCATTGCAGTTGAAGACATCGCAAGGCCAATGCCACCGACCACCGCCGCCTGCCAGGCGAAATCCGTCAGCATCAATAAT‑CCCGCCAGCAACGCCGCGCTTAACAGCA‑CCTGTGCCGCGCCTACGCCAAAAATCGAACGCCGCAGTTGCCAAAGTTTGGAGGGATTCAAc > 1:586798/1‑191 (MQ=255) ataa‑aTTGCAAGCCCATTGCAATTGAAGAAAACGAAGGCCCACGGCCCCCGCCCACCGCCGCCGGCCAGGCGAAATCCGGCAGCATCAATAAT‑CCCGCCAGCAACGCCGCGCTTAACAGCA‑CCTGTGCCGCGCCTACGCCAAAAATCGAACGCCGCAGTTGCCAAAGTTTGGAGGGATTCAACTCAAGGCCGATGATAAACATCAGGAATACCACGCCGAGTTCCGAAAAGTGGAGGAt < 1:556841/236‑1 (MQ=255) aTTGCAACGCCATTGCAGTTGAAGACATCGCAAGGCCAATGCCACCGACCACCGCCGCCTGCCAGGCGAAATCCGTCAGCATCAATAAT‑CCCGCCAGCAACGCCGCGCTTAACAGCA‑CCTGTGCCGCGCCTACGCCAAAAATCGAACGCCGCAGTTGCCCAAGTTTGGAGGGATTCAACTCAAGGCCGATGATAAACATCAGGAATACCACGCCGAGTTCCGAAAAGTggaggactcca > 1:1034435/1‑234 (MQ=255) aCGCCATTGCAGTTGAAGACATCGCAAGGCCAATGCCACCGACCACCGCCGCCTGCCAGGCGAAATCCGTCAGCATCAATAAT‑CCCGCCAGCAACGCCGCGCTTAACAGCA‑CCTGTGCCGCGCCTACGCCAAAAATCGAACGCCGCAGTTGCCAAAGTTTGGAGGGATTCAACTCAAGGCCGATGATAAACATCAGGAATACCACGCCGAGTTCCGAAAAGTGGAGGATCTCATCGCCg > 1:840980/1‑239 (MQ=255) aCGCCATTGCAGTTGAAGACATCGCAAGGCCAATGCCACCGACCACCGCCGCCTGCCAGGCGAAATCCGTCAGCATCAATAAT‑CCCGCCAGCAACGCCGCGCTTAACAGCA‑CCTGTGCCGCGCCTACGCCAAAAATCGAACGCCGCAGTTGCCAAAGTTTGGAGGGATTCAACTCAAGGCCGATGATAAACATCAGGAATACCACGCCGAGTTCCGAAAAGGGGAGGATCTCATCGAc > 1:601369/1‑238 (MQ=255) ccccATTGGAGTTAAAGACCTCCGAAGGCCAACGCCCCCGCCCCCCGCCGCCTGCCGGGCAAAATCCGCAAACAACAATAAT‑CCCGCCAGCAACGCCGCGCTTAACAGCA‑CCTGTGCCGCGCCTACGCCAAAAATCGAACGCCGCAGTTGCCAAAGTTTGGAGGGATTCAACTCAAGGCCGATGATAAACATCAGGAATACCACGCCGAGTTCCGAAAAGTGGAGGATCTCATCGACGt < 1:871708/237‑1 (MQ=255) cGCCATTGCAGTTGAAAAAAACACAAGGACAATGCCCCCGCCCCCCGCACCCGGCCAGGCAAAACCCGCCAGACTCAATATA‑CCCGCCAGCAACGCCGCGCTTAACAGCA‑CCTGGGCCGCGCCTACGCCAAAAATCGAACGCCGCAGTTGCCAAAGTTTGGAGGGATTCAACTCAAGGCCGATGATAAACATCAGGAATACCACGCCGAGTTCCGAAAAGTGGAGGATCTCATCGACGt < 1:871707/239‑1 (MQ=255) ccATTGCAGTTGAAGACATCGAAAGGCCAATGCCACCGACCCCCGCCGCCTGCCGGGCAAAACCCGTCAGCATAAATAAT‑CCCGCCAGCAACGCCGCGCTTAACAGCA‑CCTGTGCCGCGCCTACGCCAAAAATCGAACGCCGCAGTTGCCAAAGTTTGGAGGGATTCAACTCAAGGCCGATGATAAACATCAGGAATACCACGCCGAGTTCCGAAAAGTGGAGGATCTCATCGACGTCg < 1:813364/239‑1 (MQ=255) ttGCAGTTGAAGACATCGCAAGGCCAATGCCACCGACCACCGCCGCCTGCCAGGCGAAATCCGTCAGCATCAATAAT‑CCCGCCAGCAACGCCGCGCTTAACAGCA‑CCTGTGCCGCGCCTACGCCAAAAATCGAACGCCGCAGTTGCCAAAGTTTGGAGGGATTCAACTCAAGGCCGATGATAAACATCAGGAATACCACGCCGAGTTCCGAAAAGTGGCGGATCTCATCGACGCCCCta > 1:885625/1‑239 (MQ=255) tGCAGTTGAAGACATCGCAAGGCCAATGCCACCGACCACCGCCGCCTGCCAGGCGAAATCCGTCAGCATCAATAAT‑CCCGCCAGCAACGCCGCGCTTAACAGCA‑CCTGTGCCGCGCCTACGCCAAAAATCGAACGCCGCAGTTGCCAAAGTTTGGAGGGATTCAACTCAAGGCCGATGATAAACATCAGGAATACCACGCCGCGTTCCGAAAAGTGGGGGATATCATCGACGTCGCtaa > 1:1071989/1‑239 (MQ=255) gAAGACATCGCAAGGCCAATGCCACCGACCACCGCCGCCTGCCAGGCGAAATCCGTCAGCATCAATAAT‑CCCGCCAGCAACGCCGCGCTTAACAGCA‑CCTGTGCCGCGCCTACGCCAAAAATCGAACGCCGCAGTTGCCAAAGTTTGGAGGGATTCAACTCAAGGCCGATGATAAACATCAGGAATACCACGCCGAGTTCCGAAAAGTGGAGGGTCCCATCGACGTCGCTAATAAAcc > 1:1208165/1‑238 (MQ=255) gAAGACATCGCAAGGCCAATGCCACCGACCACCGCCGCCTGCCAGGCGAAATCCGTCAGCATCAATAAT‑CCCGCCAGCAACGCCGCGCTTAACAGCA‑CCTGTGCCGCGCCTACGCCAAAAATCGAACGCCGCAGTTGCCAAAGTTTGGAGGGATTCAACTCAAGGCCGATGATAAACATCAGGAATACCACGCCGAGTTCCGAAAAGTGGAGGAACTCATCGACGTCCCTAATAAAccc > 1:80233/1‑239 (MQ=255) gAAGACATCGCAAGGCCAATGCCACCGACCACCGCCGCCTGCCAGGCGAAATCCGTCAGCATCAATAAT‑CCCGCCAGCAACGCCGCGCTTAACAGCA‑CCTGTGCCGCGCCTACGCCAAAAATCGAACGCCGCAGTTGCCAAAGTTTGGAGGGATTCAACTCAAGGCCGATGATAAAAATCAGGAATACCACGCCGAGTTCCGAAAATGGGAGGATCTCATCGACGTCGCTAATAAAcc > 1:1021092/1‑238 (MQ=255) cATCGCAAGGCCAATGCCACCGACCACCGCCGCCTGCCAGGCGAAATCCGTCAGCATCAATAAT‑CCCGCCAGCAACGCCGCGCTTAAAAGCA‑CCTGTGCCGCGCCTACGCCAAAAATCGAACGCCGCCGTTGCCCAAGTTTGGCGGGATTAAACTCAAAGCAGATGCTAAACCTCAGGAATACCACGCCGCGTTCCGAAACGTGGAGGATCACCTCGACGTCGCTAAAAAACCCCacc > 2:213925/1‑236 (MQ=255) aaccacAAGGCAAAGCCCACCGACCCCCGCCGCCTGCCAGGCGAAATCCGTCAGCATCAATAAC‑CCCGCCAGCAACGCCGCGCTTAACAGCA‑CCTGTGCCGCGCCTACGCCAAAAATCGAACGCCGCAGTTGCCAAAGTTTGGAGGGATTCAACTCAAGGCCGATGATAAACATCAGGAATACCACGCCGAGTTCCGAAAAGTGGAGGATCTCATCGACGTCGCTAATAAACCCCAg < 1:750085/232‑1 (MQ=255) accGCAAGGCAAATGCACCCGCCCCCCGCCCCCTGCCAGGCGAAATCCGTCAGCAACAATAAT‑CCCGCCAGCAACGCCGCGCTTAACAGCA‑CCTGTGCCGCGCCTACGCCAAAAATCGAACGCCGCAGTTGCCAAAGTTTGGAGGGATTCAACTCAAGGCCGATGATAAACATCAGGAATACCACGCCGAGTTCCGAAAAGTGGAGGATCTCATCGACGTCGCTAATAAACCCCAGc < 1:213288/235‑1 (MQ=255) cGCCAGGCCAATGCCACCGCCCCCCGCCCCCTGCCAGGCAAAACCCGTCAGCACCAATAAC‑CCCGCCAGCAACGCCGCGCTTAACAGCA‑CCTGTGCCGCGCCTACGCCAAAAATCGAACGCCGCAGTTGCCAAAGTTTGGAGGGATTCAACTCAAGGCCGATGATAAACATCAGGAATACCACGCCGAGTTCCGAAAAGTGGAGGATCTCATCGACGTCGCTAATAAACCCCAGccccc < 1:430386/239‑1 (MQ=255) cGCAAGGCCAATGCCACCGACCACCGCCGCCTGCCAGGCGAAATCCGTCAGCATCAATAAT‑CCCGCCAGCAACGCCGCGCTTAACAGCA‑CCTGTGCCGCGCCTACGCCAAAAATCGAACGCCGCAGTTGCCAAAGTTTGGCGGGATTCAACTCAAGGCCGATGATAAACATCAGGAATACCCCGCCGAGTTCCGAAAAGAGGGGGGTCCCATACACGTCCCTAAAAAACCCAAGccccc > 2:213288/1‑239 (MQ=255) cGCAAGGCCAATGCCACCGACCACCGCCGCCTGCCAGGCGAAATCCGTCAGCATCAATAAT‑CCCGCCAGCAACGCCGCGCTTAACAGCA‑CCTGTGCCGCGCATACGCCAAAAATCGAACGCCGCAGTTGCCAAAGTTTGGAGGGATTAAACTCAAGGCCGATGATAAACATCAGGAATACCACGCCGAGATCCGAAAAGCGGAGGAGCTCATCGACGTCGATAATAAACCCCCAcccc > 1:345040/1‑238 (MQ=255) cGCAAAGCCAATGCCACCGACCACCGCCGCCTGCCAGGCGAAATCCGTCAGCATCACTAAT‑CCCGCCAGCAACCCCCCGCTTAACAGCA‑CCTTTGCCGCGCCTACGCCAAAAATCGACCTCCTCAGTTGCCAAAGTTTGCAGGGATCCACCTCAAGGCCGACGATAAACACTCGGAATACCTCCCCGGGTTCCCCAACGGGAGGGATCCCATCCCCACCGCTAAAAAAccaccgaaccc > 2:1127622/1‑230 (MQ=255) gCAAGGCCAATGCCACCGCCCCCCCCCCCCTGCCAGTCAAAACCCGTCAGCATAAATAAC‑CCCGCCAGCAACGCCGCGCTTAACAGCA‑CCTGTGCCGCGCCTACGCCAAAAATCGAACGCCGCAGTTGCCAAAGTTTGGAGGGATTCAACTCAAGGCCGATGATAAACATCAGGAATACCACGCCGAGTTCCGAAAAGTGGAGGATCTCATCGACGTCGCTAATAAACCCCAGCCCCCa < 1:1252060/239‑1 (MQ=255) cAAGGCCAATCCCACCGACCCCCGCCGCCGGCCAGGCAAAATCCTGCAGCATCAATAAC‑CCCGCCAGCAACGCCGCGCTTAACAGCA‑CCTGTGCCGCGCCTACGCCAAAAATCGAACGCCGCAGTTGCCAAAGTTTGGAGGGATTCAACTCAAGGCCGATGATAAACATCAGGAATACCACGCCGAGTTCCGAAAAGTGGAGGATCTCATCGACGTCGCTAATAAACCCCAGCCCCCAc < 1:213925/239‑1 (MQ=255) aaGGCCAATGCCACCGACCACCGCCGCCTGCCAGGCGAAATCCGTCAGCATCAATAAT‑CCCGCCAGCAACGCCGCGCTTAACAGCA‑CCTGTGCCGCGCCTACGCCAAAAATCGAACGCCGCAGTTGCCAAAGTTTGGAGGGATTCCACTCAAGGCCGATGATAAACATCAGGAAACCCACGCCGAGTTCCGAAAAGAGGAGGATTCCCCCGACGTCGCCAACAAACCCAAGCCCCCACg > 2:430386/1‑239 (MQ=255) cccaacccccccGCCCCCCCCCCCCTGCCTGGCAAACTCCCTCAGCCTAAAAAAC‑CCCGCCAGCAACGCCGCGCTTAACAGCA‑CCTGTGCCGCGCCTACGCCAAAAATCGAACGCCGCAGTTGCCAAAGTTTGGAGGGATTCAACTCAAGGCCGATGATAAACATCAGGAATACCACGCCGAGTTCCGAAAAGTGGAGGATCTCATCGACGTCGCTAATAAACCCCAGCCCCCACGGGc < 2:913652/229‑1 (MQ=255) tGCCACCGACCACCGCCGCCTGCCAGGCGAAATCCGTCAGCATCAATAAT‑CCCGCCAGCAACGCCGCGCTTAACAGCA‑CCTGTGCCGCGCCTACGCCAAAAATCGAACGCCGCAGTTGCCAAAGTTTGGAGGGATTCAACTCAAGGCCGATGATAAACATCAGGAATACCACGCCGAGTTCCGAAAAGTGGAGGATCTCATCGACGTCGCTAATAAACCCCAGCCCCCACGGGCCAAtt > 1:1179574/1‑239 (MQ=255) ccGACCACCGCCGCCTGCCAGGCGAAATCCGTCAGCATCAATAAT‑CCCGCCAGCAACGCCGCGCTTAACAGCA‑CCTGTGCCGCGCCTACGCCAAAAATCGAACGCCGCAGTTGCCAAAGTTTGGAGGGATTCAACTCAAGGCCGATGATAAACATCAGGAATACCACGCCGGGTTCCGAAAAGTGGAGAACCTCATCGCCGCCGCAAATAAACCCCACCCCCCACGGCCCAATTGCaa > 2:190004/1‑238 (MQ=255) ccGACCACCGCCGCCTGCCAGGCGAAATCCGTCAGCATCAATAAT‑CCCGCCAGCAACGCCGCGCTTAACAGCA‑CCTGTCCCGCGCCTACGCCAAAAATCGAACGCCGCAGTTGCCAAAGTTTGGAGGGATTCAACTCAAGGCCGATGATAAACATCAGGAATACCACGCCGAGTTCCGAAAAGTGGAGGATCTCATCGACGTCGCTAATAAACCCCAGCCCCCACGGGCCAATTGCaa > 1:935678/1‑238 (MQ=255) cGACCACCGCCGCCTGCCAGGCGAAATCCGTCAGCATCAATAAT‑CCCGCCAGCAACGCCGCGCTTAACAGCA‑CCTGTGCCGCGCCTACGCCAAAAATCGAACGCCGCAGTTGCCAAAGTTTGGAGGGATTCAACTCAAGGCCGATGATAAACATCAGGAATACCACGCCGAGTTCCGAAACGTGGAGGATATCATCGACGTCGCTAATAAACCCCAACACCCACGGGCCAATTGCAAt > 1:84339/1‑238 (MQ=255) ccccccgccgCCCGCCAGGCGAAACCCGTCAGCATAAATAAC‑CCCGCCAGCAACGCCGCGCTTAACAGCA‑CCTGTGCCGCGCCTACGCCAAAAATCGAACGCCGCAGTTGCCAAAGTTTGGAGGGATTCAACTCAAGGCCGATGATAAACATCAGGAATACCACGCCGAGTTCCGAAAAGTGGAGGATCTCATCGACGTCGCTAATAAACCCCAGCCCCCACGGGCCAATTGCAATccc < 1:449250/235‑1 (MQ=255) ccggccagcgcaaaTCCGACAGCATCAAATAC‑CCCGCCAGCAACGCCGCGCTTAACAGCA‑CCTGTGCCGCGCCTACGCCAAAAATCGAACGCCGCAGTTGCCAAAGTTTGGAGGGATTCAACTCAAGGCCGATGATAAACATCAGGAATACCACGCCGAGTTCCGAAAAGTGGAGGATCTCATCGACGTCGCTAATAAACCCCAGCCCCCACGGGCCAATTGCAATCCCTGCCAGCaaa < 1:464699/228‑1 (MQ=255) cccaccgggCAAAACCCGTAAGCTACAAAAGC‑CCCGCCAGCAACGCCGCGCTTAACAGCA‑CCGGTGCCGCGCATACGCCAAAAATCGAACGCCGCAGTTGCCAAAGTTTGGAGGGATTCAACTCAAGGCCGATGATAAACATCAGGAATCCCACGCCGAGTTCCGAAAAGTGGAGGATCTCATCGACGTCGCTAATAAACCCCAGCCCCCACGGGCCAATTGCAATCCCTGCCAGCaaa < 1:1074367/232‑1 (MQ=255) ccTGCCGGGCAAATGCCGCCAAAATCAATAAC‑CCCGCCAGCAACGCCGCGCTTAACAGCA‑CCTGTGCCGCGCCTACGCCAAAAATCGAACGCCGCAGTTGCCAAAGTTTGGAGGGATTCAACTCAAGGCCGATGATAAACATCAGGAATACCACGCCGAGTTCCGAAAAGTGGAGGATCTCATCGACGTCGCTAATAAACCCCAGCCCCCACGGGCCAATTGCAATCCCTGCCAGCaaa < 1:66661/239‑1 (MQ=255) ccTGCCAGGCGAAATCCGTCAGCATCAATAAT‑CCCGCCAGCAACGCCGCGCTTAACAGCA‑CCTGTGCCGCGCCTACGCCAAAAATCGAACGCCGCAGTTGCCAAAGTTTGGAGGGATTCAACTCAAGGCCGATGCTAAACATCAGGAATACCACGCCAAGTTCCGAAAACTGGAGGAGCACATCGACGTCACAAATCAACCCCCACCACCACGGGACACATGCAAACCCCGCCACCaaa > 2:640201/1‑239 (MQ=255) ccTGCCAGGCCAACTCCGCCAGCCTCAATAAC‑CCCGCCAGCAACGCCGCGCTTAACAGCA‑CCTGTGCCGCGCCTACGCCAAAAATCGAACGCCGCAGTTGCCAAAGTTTGGAGGGATTCAACTCAAGGCCGATGATAAACATCAGGAATACCACGCCGAGTTCCGAAAAGTGGAGGATCTCATCGACGTCGCTAATAAACCCCAGCCCCCACGGGCCAATTGCAATCCCTGCCAGCaaa < 1:1227873/239‑1 (MQ=255) ccTGACAGGCGAAACCCGGCAGCATCAATAAC‑CCCGCAAGCAACGCCGCGCTTAACAGCA‑CCTGTGCCGCGCCTACGCCAAAAATCGAACGCCGCAGTTGCCAAAGGTTGGAGGGATTCAACTCAAGGCCGATGATAAACATCAGGAATACCACGCCGAGTTCCGAAAAGTGGAGGATCTCATCGACGTCGCTAATAAACCCCAGCCCCCACGGGCCAATTGCAATCCCTGCCAGCaaa < 1:802850/239‑1 (MQ=255) cagggcaaaTCGGTAAGCATCAAAAAC‑CCCGCCAGCAACGCCGCGCTTAACAGCA‑CCTGTGCCGCGCCTACGCCAAAAATCGAACGCCGCAGTTGCCAAAGTTTGGAGGGATTCAACTCAAGGCCGATGATAAACATCAGGAATACCACGCCGAGTTCCGAAAAGTGGAGGATCTCATCGACGTCGCTAATAAACCCCAGCCCCCACGGGCCAATTGCAATCCCTGCCAGCAAATATcc < 1:260506/233‑1 (MQ=255) gCGAAATCCGTCAGCATCAATAAT‑CCCGCCAGCAACGCCGCGCTTAACAGCA‑CCTGTGCCGCGCCTACGCCACAAATCGAACGCCTCAGTTGCCAAAGTTTGGAGGGATTCAACTCAAGGCCGCTGATAAACATCCGGAATACCACGCCTGGTTCCGCAAATGGGAGCACCCACTCGCCGTCGCCAATAAACCCCCGCCCCCCCCGGCCAACTGCAAACCCCGCGGCCAAAAATCCaaa > 2:99260/1‑239 (MQ=255) gCGAAATCCGTCAGCATCAATAAT‑CCCGCCAGCAACGCCGCGCTTAACAGCA‑CCTGTGCCGCGCCTACGCCAAAAATCGAACGCCGCAGTTGCCAAAGTTTGGCGGGATTCAACTCAAGACCGATGCTAAACATCAGGAATACCACGCCCAGTTCCGAAAAGTGGAGGATCTCATCGACGCCGCCAAAAAACCCCCACCCCCACCGGCCAAATGCCATCCACGCCCCCAAACATCCCa > 2:87665/1‑238 (MQ=255) aaTCCGCAAGCA‑CAATAAACCCCGCCAGCAACGCCGCGCTTAACAGCA‑CCTGTGCCGCGCCTACGCCAAAAATCGAACGCCGCAGTTGCCAAAGTTTGGAGGGATTCAACTCAAGGCCGATGATAAACATCAGGAATACCACGCCGAGTTCCGAAAAGTGGAGGATCTCATCGACGTCGCTAATAAACCCCAGCCCCCACGGGCCAATTGCAATCCCTGCCAGCAAATATCCCAAcaca < 1:1130584/239‑1 (MQ=255) aTCCGTCAGCTACAAAACC‑CCCGCCAGCAACCCCGCCACTAACAGCC‑CCTGGGCCGCGCCTACGCCAAAAATCGAACGCCGCAGTTGCCAAAGTTTGGAGGGATTCAACTCAAGGCCGATGATAAACATCAGGAATACCACGCCGAGTTCCGAAAAGTGGAGGATCTCATCGACGTCGCTAATAAACCCCAGCCCCCACGGGCCAATTGCAATCCCTGCCAGCAAATATCCCAACACAg < 1:616446/239‑1 (MQ=255) cGTCAGCAACAATAAC‑CCCGCCAGCAACGCCGCGGTTAACAGCC‑CCTGTGCCGCGCCTACGCCAAAAATCGAACGCCGCAGTTGCCAAAGTTTGGAGGGATTCAACTCAAGGCCGATGATAAACATCAGGAATACCACGCCGAGTTCCGAAAAGTGGAGGATCTCATCGACGTCGCTAATAAACCCCAGCCCCCACGGGCCAATTGCAATCCCTGCCAGCAAATATCCCAACACAgcgc < 1:692971/239‑1 (MQ=255) | ACCTTCATCCAGTCGAAATGTTCGTCTGCCGACCCCGCCAACAACGGCACTAACGCCAGTGCTGGGATTACTGCCAGATCCTGAAACAGCAGAACCGAAAACCCGAGCTGGCCGGATTCGCTGCGATTCATCCCTTTCTCACGCATCA‑ATTGCAACGCCATTGCAGTTGAAGACATCGCAAGGCCAATGCCACCGACCACCGCCGCCTGCCAGGCGAAATCCGTCAGCATCAATAAT‑CCCGCCAGCAACGCCGCGCTTAACAGCA‑CCTGTGCCGCGCCTACGCCAAAAATCGAACGCCGCAGTTGCCAAAGTTTGGAGGGATTCAACTCAAGGCCGATGATAAACATCAGGAATACCACGCCGAGTTCCGAAAAGTGGAGGATCTCATCGACGTCGCTAATAAACCCCAGCCCCCACGGGCCAATTGCAATCCCTGCCAGCAAATATCCCAACACAGCGC > NC_000913/3480060‑3480519 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |