Predicted mutation
evidence seq id position mutation freq annotation gene description
JC JC NC_000913 1,293,032 IS1 (–) +8 bp 100% intergenic (‑110/‑488) hns ← / → tdk global DNA‑binding transcriptional dual regulator H‑NS/thymidine kinase/deoxyuridine kinase

New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 257908 =NA (NA)66 (1.160) 45/418 NT 100% noncoding (768/768 nt) IS1 repeat region
?NC_000913 = 1293039 0 (0.000)intergenic (‑117/‑488) hns/tdk global DNA‑binding transcriptional dual regulator H‑NS/thymidine kinase/deoxyuridine kinase
* ? NC_000913 1293032 =0 (0.000)64 (1.120) 46/418 NT 100% intergenic (‑110/‑495) hns/tdk global DNA‑binding transcriptional dual regulator H‑NS/thymidine kinase/deoxyuridine kinase
?NC_000913 = 1979270 NA (NA)noncoding (1/768 nt) IS1 repeat region

ATTGCGACTGTTCTACTTTTCATCATTCGCTTAATAGGGAATTCTCGTAAACACAACTAATACAGAAGACTGAAAGGTCGTCAGCCTACGATAATCTCCCCATAAAATGTGACATGAATCAGGAAGTTTTAACCTCACGT‑‑GCTGCGAAATCATCGGTGTAAATAGGGCTATATGCCGCGTCTTTTCTGGCTAATTTTATGAAAAGATATTTA‑‑TTGGCGGCACAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_000913/1293255‑1293032
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑GGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGTTTCTATCAGCTGTCCCTCCTGTTCAGCTACTGACGGGGTGGTGCGTAACGGCAAAAGCACCGCCGGACATCAGCGCTATCTCTGCTCTCACTGCCGTAAAACATGGCAACTGCAGTTCACTTACACCGCTTCTCAACCCGGTACGCACCAGAAAA  <  NC_000913/1979270‑1979050
                                                                                                                                                                                                                                                                                                                                                                                                                                                                   
ATTGCGACTGTTCTACTTTTCATCATTCGCTTAATAGGGAATTCTCGTAAACACAACTAATACAGAAGACTGAAAGGTCGTCAGCCTACGATAATCTCCCCATAAAATGTGACATGAATCAGGAAGTTTTAACCTCACGT‑‑GCTGCGAAATCATCGGTGTAAATAGGGCTATATGCCGCGTCTTTTCTGGCTAATTTTATGAAAAGATATTTA‑‑TTGGCGGCACAAGGTG                                                                                                                                                                                                                             <  1:61027/228‑1
   gagcagGTTCGACTTTTCAATATTCGCATAATAGGGAATTCTCGTAAACACAACTAATACAGAAGACTGAAAGGTCGTCAGCCTACGATAATCTCCCCATAAAATGTGACATGAATCAGGAAGTTTTAACCTCACGT‑‑GCTGCGAAATCATCGGTGTAAATAGGGCTATATGCCGCGTCTTTTCTGGCTAATTTTATGAAAAGATATTTA‑‑TTGGCGGCACAAGGTGATGC                                                                                                                                                                                                                         <  1:178213/223‑1
   GCGACTGTTCTACCTTTCATCATTCGCTTAATAGGGAATTCTCGTAAACACAACTAAGACAGAAGACTGAAAGTTCGTCAGCCTACGATAATCTCCCCATAAAATGTGACATGAATCAGGAAGTTTTAACCTCACGT‑‑GCTGCGAAATCATCGGTGTAAATAGGGCTATATGCCGCGTCTTTTCTGGCTAATTTTATGAAAAGATATTTA‑‑TTGGCGGCACAAGGTGATGC                                                                                                                                                                                                                         <  1:676167/229‑1
     GACTGTTCTACTTTTCATCATTCGCTTAATAGGGAATTCTCGTAAACACAACTAATACAGAAGACTGAAAGGTCGTCAGCCTACGATAATCTCCCCATAAAATGTGACATGAATCAGGAAGTTTTAACCTCACGT‑‑GCTGCGAAATCATCGGTGTAAATAGGGCTATATGCCGCGTCTTTTCTGGCTAATTTTATGAAAAGATATTTA‑‑TTGGCGGCACAAGGTGATGCTG                                                                                                                                                                                                                       <  1:436229/229‑1
      ACTGTTCTACTTTTCATCATTCGCTTAATAGGGAATTCTCGTAAACACAACTAATACAGAAGACTGAAAGGTCGTCAGCCTACGATAATCTCCCCATAAAATGTGACATGAATCAGGAAGTTTTAACCTCACGT‑‑GCTGCGAAATCATCGGTGTAAATAGGGCTATATGCCGCGTCTTTTCTGGCTAATTTTATGAAAAGATATTTA‑‑TTGGCGGCACAAGGTGATGCTGC                                                                                                                                                                                                                      >  1:322424/1‑229
      ACTGTTCTACTTTTCATCATTCGCTTAATAGGGAATTCTCGTAAACACAACTAATACAGAAGACTGAAAGGTCGTCAGCCTACGATAATCTCCCCATAAAATGTGACATGAATCAGGAAGTTTTAACCTCACGT‑‑GCTGCGAAATCATCGGTGGAATTAGGGCTATATGCCGCGTCTTTTCTGGCTAATTTTATGAAAAGATGTTTT‑‑TTGGCGGCACAAGGgtaggg                                                                                                                                                                                                                         >  2:676166/1‑220
       CTGTTCTACTTTTCATCATTCGCTTAATAGGGAATTCTCGTAAACACAACTAATACAGAAGACTGAAAGGTCGTCAGCCTACGATAATCTCCCCATAAAATGTGACATGAATCAGGAAGTTTTAACCTCACGT‑‑GCTGCGAAATCATCGGTGTAAATAGGGCTATATGCCGCGTCTTTTCTGGCTAATTTTATGAAAAGATATTTA‑‑TTGGCGGCACAAGGTGATGCTGCC                                                                                                                                                                                                                     <  1:17754/229‑1
           cagACTTTTCATCATTCGCTTAATAGGGAATTCTCGTAAACACAACTAATTCAGAAGACTGAAAGGTCGTCAGCCTACGATAATCTCCCCATAAAATGTGACATGAATCAGGAAGTTTTAACCTCACGT‑‑GCTGCGAAATCATCGGTGTAAATAGGGCTATATGCCGCGTCTTTTCTGGCTAATTTTATGAAAAGATATTTA‑‑TTGGCGGCACAAGGTGATGCTGCCAA                                                                                                                                                                                                                   <  1:179276/224‑1
             TACTTTTTATCATTCGATTAATAGGGAATTCTCGTAAACACAACTAATACAGAAGACTGAAAGGTCGTCAGCCTACGATAATCTCCCCATAAAATGTGACATGAATCAGGAAGTTTTAACCTCACGT‑‑GCTGCGAAATCATCGGTGTAAATAGGGCTATATGCCGCGTCTTTTCTGGCTAATTTTATGAAAAGATATTTA‑‑TTGGCGGCACAAGGTGATGCTGCCAACTTA                                                                                                                                                                                                               <  2:178166/229‑1
                   TCATCATTCGCTTAATAGGGAATTCTCGTAAACACAACTAATACAGAAGACTGAAAGGTCGTCAGCCTACGATAATCTCCCCATAAAATGTGACATGAATCAGGAAGTTTTAACCTCACGT‑‑GCTGCGAAATCATCGGTGTAAATAGGGCTATATGCCGCGTCTTTTCTGGCTAATTTTATGAAAAGATATTTA‑‑TTGGCGGCACAAGGTGATGCTGCCAACTTACTGATT                                                                                                                                                                                                         <  1:256439/229‑1
                   TCATCATTCGCTTAATAGGGAATTCTCGTAAACACAACTAATACAGAAGACTGAAAGGTCGTCAGCCTACGATAAGCTCCTCATAAAATGTGACATGAATCAGGAAGTTTTAACCTCACGT‑‑GCTGCGAAATCATCGGTGTAAATAGGGCTATATGCCGCGTCTTTTCTGGCTAATTTTATGAAAAGATATTTA‑‑TTGGCGGCACAAGGTGATGCTGCCAACTTACTGATT                                                                                                                                                                                                         <  1:484537/229‑1
                    CATCATTCGCTTAATAGGGAATTCTCGTAAACACAACTAATACAGAAGACTGAAAGGTCGTCAGCCTACGATAATCTCCCCATAAAATGTGACATGAATCAGGAAGTTTTAACCTCACGT‑‑GCTGCGAAACCATCGGTGTAAATAGGGCTATATGCCCGGCCTTTTCTGGCTACTTTTATGAAAAGCTATTTA‑‑TTGGCGGCCCAAGGGGATGCTGCCAACTTACctacca                                                                                                                                                                                                        >  2:178213/1‑223
                         TTCGCTTAATAGGGAATTCTCGTAAACACAACTAATACAGAAGACTGAAAGGTCGTCAGCCTACGATAATCTCCCCATAAAATGTGACATGAATCAGGAAGTTTTAACCTCACGT‑‑GCTTCGAAATCATCGGTGTAAATAGGGCTATATGCCGCGTCTTTTCTGGCTAATTTTATGAAAAGATATTTA‑‑TTGGCGGCACAAGGGGGTGCTGACAACTTACTGATTTttttt                                                                                                                                                                                                   >  2:179276/1‑224
                         TTCGCTTAATAGGGAATTCTCGTAAACACAACTAATACAGAAGACTGAAAGGTCGTCAGCCTACGATAATCTCCCCATAAAATGTGACATGAATCAGGAAGTTTTAACCTCACGT‑‑GCTGCGAAATCATCGGTGTAAATAGGGCTATATGCCGCGTCTTCTCTGGCTAATTTTATGAAAAGATATTTA‑‑TTGGCGGCACAAGGTGATGCTGCCAACTTACTGATTTAGTGT                                                                                                                                                                                                  <  2:322424/229‑1
                               TAATAGGGAATTCTCGTAAACACAACTAATACAGAAGACTGAAAGGTCGTCAGCCTACGATAATCTCCCCATAAAATGTGACATGAATCAGGAAGTTTTAACCTCACGTGCGCTGCGAAATCATCGGTGTAAATAGGGCTATATACCGCGTCTTTTCTGGCTAATTTTATGAAAAGATATTTA‑‑TTGGCGGCACAAGGTGATGCTGCCAACTTACTGATTTAGTGTATGA                                                                                                                                                                                              <  1:385452/229‑1
                                AATAGGGAATTCTCGTAAACACAACTAATACAGAAGACTGAAAGGTCGTCAGCCTACGATAATCTCCCCATAAAATGTGACATGAATCAGGAAGTTTTAACCTCACGT‑‑GCTGCGAAATCATCGGTGTAAATAGGGCTATATGCCGCGTCTTTTCTGGCTAATTTTATGAAAAGATATTTA‑‑TTGGCGGCACAAGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGG                                                                                                                                                                                           <  1:96873/229‑1
                                AATAGGGAATTCCCATAAACACAACTAATACAGAAGACTGAAAGGTCGTCAGCCTACGATAATCTACACATAAAATGTGACATGAATCAGGAAGTTTTAACCTCACGT‑‑GCTGCGAAATCATCGGTGTAAATAGGGCTATATGCCGCGTCTTTTCTGGCTAATTTTATGAAAAGATATTTA‑‑TTGGCGGCACAAGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGG                                                                                                                                                                                           <  1:754699/229‑1
                                       AATTCTCGTAAACACAACTAATACAGAAGACTGAAAGGTCGTCAGCCTACGATAATCTCCCCATAAAATGTGACATGAATCAGGAAGTTTTAACCTCACGT‑‑GCTGCGAAATCATCGGTGTAAATAGGGCTATATGCCGCGTCTTTTCTGGCTAATTTTATGAAAAGATATTTA‑‑TTGGCGGCACCAGGGGATGCTGCCAACTTACTCATTTAGTGTATGAGGGTGTTTTT                                                                                                                                                                                    >  2:699404/1‑229
                                       AATTCTCGTAAACACAACTAATACAGAAGACTGAAAGGTCGTCAGCCTACGATAATCTCCCCATAAAATGTGACATGAATCAGGAAGTTTTAACCTCACGT‑‑GCTGCGAAATCATCGGTGTAAATAGGGCTATATGCCGCGTCTTTTCTGGCTAATTTTATGAAAAGATATTTA‑‑TTGGCGGCACAAGGTGATGCTGCCCACTTACTGCTTTCAGTGTTGATGGGGTTTTT                                                                                                                                                                                    >  1:336854/1‑229
                                          TCTCGTAAACACAACTAATACAGAAGACTGAAAGGTCGTCAGCCTACGATAATCTCCCCATAAAATGTGACATGAATCAGGAAGTTTTAACCTCACGT‑‑GCTGCGAAATCATCGGTGTAAATAGGGCTATATGCCGCGTCTTTTCTGGCCACTTTTATGAAAAGATATTTA‑‑TTGGCGGCACAAGGTCATGCTCTCAACTTTCTGTTTTAGTTTAATATGGGGTTTTTtgg                                                                                                                                                                                 >  2:344592/1‑226
                                           ccCGTAAACACAACTAATACAGAAGACTGAAAGGTCGTCAGCCTACGATAATCTCCCCATAAAATGTGACATGAATCAGGAAGTTTTAACCTCACGT‑‑GCTGCGAAATCATCGGTGTAAATAGGGCTATATGCCGCGTCTTTTCTGGCTAATTTTATGAAAAGATATTTA‑‑TTGGCGGCACAAGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGG                                                                                                                                                                                <  1:699405/227‑1
                                                      AACTAAGACAGAAGACTGAAAGGTCGTCAGCCTACGATAATCTCCCCATAAAATGTGACATGAATCAGGAAGTTTTAACCTCACGT‑‑GCTGCGAAATCATCGGTGTAAATAGGGCTATATGCCGCGTCTTTTCTGGCTAATTTTATGAAAAGATATTTATTTTGGCGGCACAAGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGT                                                                                                                                                                       <  1:285515/229‑1
                                                         TAATACAGAAGACTGAAAGGTCGTCAGCCTACGATAATCTCCCCATAAAATGTGACATGAATCAGGAAGTTTTAACCTCACGT‑‑GCTGCGAAATCATCGGTGTAAATAGGGCTATATGCCGCGTCTTTTCTGGCTAATTTTATGAAAAGATATTTA‑‑TTGGCGGCACAAGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTT                                                                                                                                                                  <  1:212222/229‑1
                                                             ACAGAAGACTGAAAGGTCGTCAGCCTACGATAATCTCCCCATAAAATGTGACATGAATCAGGAAGTTTTAACCTCACGT‑‑GCTGCGAAATCATCGGTGTAAATAGGGCTATATGCCGCGTCTTTTCTGGCTAATTTTATGAAACGATATTTA‑‑TTGGCGGCACAAGGTGATGCTGCCAACTTATTTATTTAGTGTTTGATGGTGTTTTTTAGGGGCTCCAGTGGCTTCT                                                                                                                                                                >  1:566436/1‑227
                                                              CAGAAGACTGAAAGGTCGTCAGCCTACGATAATCTCCCCATAAAATGTGACATGAATCAGGAAGTTTTAACCTCACGT‑‑GCTGCGAAATCATCGGTGTAAATAGGGCTATATGCCGCGTCTTTTCTGGCTAATTTTATGAAAAGATATTTA‑‑TTGGCGGCACAAGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGTT                                                                                                                                                             <  1:18502/229‑1
                                                                   GACTGAAAGGTCGTCAGCCTACGATAATCTCCCCATAAAATGTGACATGAATCAGGAAGTTTTAACCTCACGT‑‑GCTGCGAAATCATCGGTGTAAATAGGGCTATATGCCGCGTCTTTTCTGGCTAATTTTATGAAAAGATATTTA‑‑TTGGCGGCACAAGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGGGTTTTTGAGGTGGTCCAGTGGCTTCTGTTTCT                                                                                                                                                          >  1:311299/1‑227
                                                                            GTCGTCAGCCTACGATAATCGCCCCATAAAAGGGGACATGAATCAGGAAGTTTTAACCTCACGT‑‑GCTGCGAAATCATCGGTGTAAATAGGGCTATATGCCGCGTCTTTTCTGGCTAATTTTATGAAAAGATATTTA‑‑TTGGCGGCACAAGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGTTTCTATCAGCT                                                                                                                                                   <  1:137089/225‑1
                                                                               GTCAGCCTACGATAATCTCCCCATAAAATGTGACATGAATCAGGAAGTTTTAACCTCACGT‑‑GCTGCGAAATCATCGGTGTAAATAGGGCTATATGCCGCGTCTGTTCTGCCTAATTTTATGAAAAGATATTTA‑‑TTGGCGGCACAAGGGGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGTTTCTATCAGCTGTCCCTC                                                                                                                                            >  1:442992/1‑229
                                                                                    CCTACGATAATCCCCCCATAAAATGTGACATGAATCAGGAAGGTTTAACCTCACGT‑‑GCTGCGAAATCATCGGTGTAAATAGGGCTATATGCCGCGTCTTTTCTGGCTAATTTTATGAAAAGATATTTA‑‑TTGGCGGCACAAGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGTTTCTATCAGCTGTCCCTCCTGTT                                                                                                                                       <  1:597966/229‑1
                                                                                       ACGATAATCTCCCCATAAAATGTGACATGAATCAGGAAGTTTTAACCTCACGT‑‑GCTGCGAAATCATCGGTGTAAATAGGGCTATATGCCGCGTCTTTTCTGGCTAATTTTATGAAAAGATATTTA‑‑TTGGCGGCACAAGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGG                                                                                                                                                                                           <  2:529181/174‑1
                                                                                       ACGATAATCTCCCCATAAAATGTGACATGAATCAGGAAGTTTTAACCTCACGT‑‑GCTGCGAAATCATCGGTGTAAATAGGGCTATATGCCGCGTCTTTTCTGGCTAATTTTATGAAAAGATATTTA‑‑TTGGCGGCACAAGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGG                                                                                                                                                                                           >  1:529181/1‑174
                                                                                              TCTCCCCATAAAATGTGACATGAATCAGGAAGTTTTAACCTCACGT‑‑GCTGCGAAATCATCGGTGTAAATAGGGCTATATGCCGCGTCTTTTCTGGCTAATTTTATGAAAAGATATTTA‑‑TTGGCGGCACAAGGTGATGCTGCCAACTTACTGATTTAGTGCATGATGGTGTTTTTGAGGTGCTCCAGTGGCCTCTGTTTCTATTAGCTGGCCCTCCTGGTCAGCTATTGA                                                                                                                             >  1:696442/1‑229
                                                                                                            GTGACATGAATCAGGAAGTTTTAACCTCACGT‑‑GCTGCGAAATCATCGGTGTAAATAGGGCTATATGCCGCGTCTTTTCTGGCTAATTTTATGAAAAGATATTTA‑‑TTGGCGGCACAAGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGTTTCTATCAGCTGTCCCTCCTGTTCAGCTACTGACGGGGTGGTGCGTA                                                                                                               >  1:27244/1‑229
                                                                                                              GACATGAATCAGGAAGTTTTAACCTCACGT‑‑GCTGCGAAATCATCGGTGTAAATAGGGCTATATGCCGCGTCTTTTCTGGCTAATTTTATGAAAAGATATTTA‑‑TTGGCGGCACAAGGTGATGCTGCCAACTTACTGATTTAGTTTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTTTTTTTATCAACTGTCCCTCCTTTTTCGCTATTGACGGGGGGGTGgctaa                                                                                                              >  2:481992/1‑223
                                                                                                                          GAAGTTTTAACCTCACGT‑‑GCTGCGAAATCATCGGTGTAAATAGGGCTATATGCCGCGTCTTTTCTGGCTAATTTTATGAAAAGATATTTA‑‑TTGGCGGCACAAGTGGACGCTGCCAACTTACTGATTTATTGTATGATGGTGTTTTTGAGGTGCTCCAGGTGCTTCTGTTTCTATCAACTGTCCCTCCTGTTTCACTACTGACGGGGTGGTGGGTAACGGCAAAAACAC                                                                                                  >  2:106355/1‑228
                                                                                                                              TTTTAACCTCACTG‑‑TCTTGGAAATCCTCGGTGTAAATAGGGTTTTATGCCGCGTCTTTTCTGGCTAATTTTATGAAAAGATATTTA‑‑TTGGCGGCACAAGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGTTTCTATCAGCTGTCCCTCCTGTTCAGCTACTGACGGGGTGGTGCGTAACGGCAAAAGCACCGCCG                                                                                             <  2:411905/229‑1
                                                                                                                                TTAACCTCACGT‑‑GCTGCGAAATCATCGGTGTAAATAGGGCTATATGCCGCGTCTTTTCTGGCTAATTTTATGAAAAGATATTTA‑‑TTGGCGGCACAAGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGTTTCTATCAGCGGTCCCTCCTGTTCAGCTACTGACGGGGTGGGGCGTGACGGCAAAAGCACGGCCGGc                                                                                           >  1:749212/1‑228
                                                                                                                                        ACGT‑‑GCTGCGAAATCATCGGTGTAAATAGGGCTATATGCCGCGTCTTTTCTGGCTAATTTTATGAAAAGATATTTA‑‑TTGGCGGCACCAGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCCGTTTCTATCAGCCGTCCCTCCTGTTCAGCTACTGACGGGGGGGTCCGTAACGGCAAAAGCCACGCCGGcaatccag                                                                                    >  1:75966/1‑220
                                                                                                                                        ACGT‑‑GCTGCGAAATCATCGGTGTAAATAGGGCTATATGCCGCGTCTTTTCTGGCTAATTTTATGAAAAGATATTTA‑‑TTGGCGGCACAAGGTGATGCTGCCAACTTACTGATTTTGTGTATGATGGTGTTTTTGCGGTGCTCCAGTTGCTTCTGTTTCTTTCAACTGTCCCTCCTGTTCAGCTTCTGACGGGGTGGTGCGGAACGGCATAAGCCCTGCCGGAAATCAG                                                                                     >  1:746476/1‑227
                                                                                                                                         CGT‑‑GCTGCGAAATCATCGGTGTAAATAGGGCTATGTGCCGCGTCTTTTCTGGCTAATTTTATGAAAAGATAGTTA‑‑TTGGCGGCACAAGTTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGGGGCTTCTGTTTCTATCAGCTGTCCCTCCTGTTCAGCTACTGACGGGGTGGTGCGTAACGGCAAAAGCACCGCCGGACATCAGCG                                                                                   <  1:478012/228‑1
                                                                                                                                         CGT‑‑GCTGCGAAATCATCGGTGTAAATAGGGCTATATGCCGCGTCTTTTCTGGCTAATTTTATGAAAAGATATTTA‑‑TTGGCGGCACAAGGGGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGTTTCTATTAGCTGTCCCTCCTGTTCAGCTACTGACGGGGTGGTGCGTAACGGCAAAAGCACCGCCGGACATTAGCc                                                                                   >  1:22871/1‑227
                                                                                                                                                          ttgtgGTAAATAGGGTTATTTGCCGCGTTTTTGCTGGCTAATTTTATGAAAAGATATTTA‑‑TTGGCGGCATAAGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGTTGCTCCAGTGGCTTCTGTTTCTATCAGCTGTCCCTCCTGTTCAGCTACTGACGGGGTGGTGCGTAACGGCAAAAGCACCGCCGGACATCAGCGCTATCTCTGCTCTCAC                                                                  <  2:149259/224‑1
                                                                                                                                                          TCGGTTTAAATAGGTTTATATGCGCCTTCTTTTCTGGCTAATTTTATGAAAAGATATTTA‑‑TTGGCGGCACAAGGTGATGCTGCCAACTTCCTGATTTAGTGTATGATGGTGTTTTTGAGGTGCCCCAGTGGCTTCTGTTTCTATCAGCTGTCCCTCCTGTTCAGCTACTGACGGGGTGGTGCGTAACGGCAAAAGCACCGCCGGACATCAGCGCTATCTCTGCTCTCAC                                                                  <  2:311299/229‑1
                                                                                                                                                                        GCTATATGCCGCGTCTTTTCTGGCTAATTTTATGAAAAGATATTTA‑‑TTGGCGGCACAAGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGCTGCTCCAGTGGCTTCTGTTTCTATCAGCTGTCCCTCCTGTTCCGCTACTGACGGGGTGGGGCGTAACGGCAAAAGCACCGCCGGCCCTCACCCCTATCCCGTCTCTCACTGCCGGAAAACcat                                                    >  2:508336/1‑226
                                                                                                                                                                          TATATGCCGCGTCTTTTCTGGCTAATTTTATGAAAAGATATTTA‑‑TTGGCGGCACAAGGTGGTGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGTTTCTATCAGCTGTCCCTCCTGTTCAGCTACTGACGGGGAGTGGCGTAACGGCAAAAGCACGGCCGGCAATCAGGGTTATTTCTGCGCTCACTCCCGTAAAACATGc                                                   >  1:370084/1‑227
                                                                                                                                                                            TATGCCGCGTCTTTTCTGGCTAATTTTATGAAAAGATATTTA‑‑TTGGCGGCACAAGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGTTTCTATCAGCTGTCCCTCCTGTTCAGCTACTGACGGGGTGGTGCTTAACGGCAAAAGCACCGCCGGACAT                                                                                        <  1:288139/190‑1
                                                                                                                                                                            TATGCCGCGTCTTTTCTGGCTAATTTTATGAAAAGATATTTA‑‑TTGGCGGCACAAGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGTTTCTATCAGCTGTCCCTCCTGTTCAGCTACTGACGGGGTGGTGCGTAACGGCAAAAGCACCGCCGGACATCAGCGCTATCTCTGCTCTCACTGCCGTAAAACATGGCA                                                 >  1:11951/1‑228
                                                                                                                                                                            TATGCCGCGTCTTTTCTGGCTAATTTTATGAAAAGATATTTA‑‑TTGGCGGCACAAGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGTTTCTATCAGCTGTCCCTCCTGTTCAGCTACTGACGGGGTGGTGCGTAACGGCAAAAGCAACGCCGGAACTCAGCGCTATCTCTGCTCTCACTGCCGTAAAACCGGGCA                                                 >  1:469896/1‑228
                                                                                                                                                                            TATGCCGCGTCTTTTCTGGCTAATTTTATGAAAAGATATTTA‑‑TTGGCGGCACAAGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGGGTTTTTGAGGTGCTCCAGTGGCTTCTGTTTCTATCAGCTGTCCCTCCTGTTCAGCTACTGACGGGGTGGTGCGTAAAGGCCAAAGCACCGCCGGACAT                                                                                        >  2:288139/1‑190
                                                                                                                                                                            TATGCCGCGTCTTTTCTGGCTAATTTTATGAAAAGATATTTA‑‑TTGGCGGCACAAGGGGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGTTTCTATCAGCTGTCCCTCCTGTTCAGCTACTGACGGGGGGGTGCGTAACGGCCAAAGACCCCCCGGACACACCCGCCATCTCTGCTCTCACTCCCGTAAAAAACGGCAA                                                >  2:376000/1‑229
                                                                                                                                                                                 CGCGTCTTTTCTGGCTAATTTTATGAAAAGATATTTA‑‑TTGGCGGCACAAGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGTTTCTATCAGCTGTCCCTCCTGTTCAGCTACTGTCGGGGTGGTGCGTAACGGCAAAAGCACCGCCGGGCATCAGCGCGATCTCTGCTCTCCCTGCCGTAAAACATGGCAACTGCA                                           >  1:35459/1‑229
                                                                                                                                                                                  cgtttTTTTTTGGCTATTTTTTTAAAAGGTTGTTTA‑‑TTGGGGGCACAAGGTGATGGTGCCAACTTACTGTTTTAGTGTATGATGGTTTTTTTGAGGTGCGTCAGTGGCTTCTGTTTCTACCAGCTGTCCCTCCTGTTCAGCTACTGACGGGGTGGTGCGTAACGGCAAAAGAACCGCCGGACATCAGCGCTATCTCTGCTCTCACTGCCGTAAAACATGGCAACTGCAG                                          <  2:27244/224‑1
                                                                                                                                                                                  GCGTGTTTTTGGGCTAATTTTATGAAAAAATATTTA‑‑GTGGCGGCACAAGGTGATGCCGCCAACTTACGGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGTTTCTATCAGCTGTCCCTCCTGTTCAGCTACTGACGGGGTGGTGCGTAACGGCAAAAGCACCGCCGGACATCAGCGCTATCTCTGCTCTCACTGCCGTAAAACATGGCAACTGCAG                                          <  2:419386/229‑1
                                                                                                                                                                                   ggttTTTTTTGGCTAATTTTTTGAAAAGATATTTA‑‑TGGGCGGCACAAGGTGATCGTGCCAACTTATTGATTTAGTGTATGAGGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGTTTCTATCAGCTGTCCCTCCTGTTCAGCTACTGACGGGGTGGTGCGTAACGGCAAAAGCACCGCCGGACATCAGCGCTATCTCTGCTCTCACTGCCGTAAAACATGGCAACTGCAG                                          <  2:674629/224‑1
                                                                                                                                                                                   gGTCTTTTTTGGCTAATTTTATGAAAAGATTTTTG‑‑TTGGCGGCAAAAGGGTGTTCCGCCATCTTTCTGATTTAGTGTTTGAGGGGTTTTTTGAGGTGCCCCAGTGGCTTCTGTTTCTAACAGCTGTCCCTCCTGTTCAGCTACTGACGGGGTGGTGCGTAACGGCAAAAGCACCCCCGGACATCAGCGCTATCTCTGCTCTCACTGCCGTAAAACATGGCAACTGCAG                                          <  2:728007/227‑1
                                                                                                                                                                                   ctgtTTTTCTGGCTATTTTTATGAAATGGTATTTG‑‑TTGGCGGGTCAAGGTGAGGCTGCCAACTTACGGAGTTAGTGTGTGACGGTGTTTGTGAGGTGCTCCAGTGGCTGCTGTTTCTATCAGCTGTCCCTCCTGTTCAGCTACTGGCGGGGTGGTGCGTAACGGCAAAAGCACCGCCGGACATCAGCGCTATCTCTGCTCTCACTGCCGTAAAACATGGCAACTGCAG                                          <  1:344592/224‑1
                                                                                                                                                                                   CGTCTTTTCTGGCTAATTTTATGAAAAGATATTTA‑‑TTGGCGGCACAAGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGTTTCTATCAGCTGTCCCTCCTGTTCAGCTACTGCCGGGGTGGTGCGTAACGGCAAAAGCACCGCCGGACATCAGCGCTATCTCTGCTCTCACTGCCGTAAAACATGGCAACTGCAG                                          <  1:623914/228‑1
                                                                                                                                                                                   CGTCTTTTCTGGCTAATTTTATGAAAAGATATTTA‑‑TTGGCGGCACAAGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGTTCCTATCAGCTGTCCCTCCTGTTCAGCTACTGCCGGGGTGGTGCGTAACGGCAAAAGCACCGCCGGACATCAGCGCTATCACTGCTCTCACTGCCGTAAAACATGGCAACTGCAG                                          <  1:60349/228‑1
                                                                                                                                                                                    tttTTTTTTGGGTAATTTTATGAAAAGAGATTTC‑‑GTGGCGGCAAAAGGGTATGCTGCCACTTTACTGAGTGAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGTTTCTATCAGCTGTCCCGCCTGTTCAGTTACTGACGTGGTGGTGCGTAACGGCAAAAGCACCGCCGGACATCAGCGCTATCTCTGCTCTCACTGCCGTAAAACATGGCAACTGCAGTT                                        <  2:370084/226‑1
                                                                                                                                                                                              GCTAATTTTATGAAACGATATTTA‑‑TTGGCGGCACAAGGGTATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGGGCTCCAGTGGCTTCTGTTTCTATCAGCTGTCCCTCCTGTTCAGCTACTGACGGGGTGGTGCGTAACGGCAAAAGCACCGCCGGACATCAGCGCTATCTCTGCTCTCACTGCCGTAAAACATGGCAACTGCAGTTCACTTACACC                              <  1:658331/229‑1
                                                                                                                                                                                                   TTTTATGAAAAGATATTTA‑‑TTGGCGGCACAAGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGTTTCTATCAGCTGTCCCTCCTGTTCAGCTACTGACGGGGTGGTGCGTAACGGCAAAAGCACCGCCGGACATCAGCGCTATCTCTGCTCTCACTGCCGTAAAACATGGGAACTGCCGTTCACTTACACCGCTTC                         >  1:55003/1‑229
                                                                                                                                                                                                    TTTATGAAAATTTATTTT‑‑TTGGCGGCACAGGGTGATGCTGCCATCTTACTGATTTGGTGTATGTTGGTGTTTTTGAGGTGCCCCGGTCGCTTCTTTTTCTACCAGCTGTCCCTCCTGTTCAGCTACTGACGGGGTGGTGCGTAACGGCAAAAGCACCGCCGGACATCAGCGCTATCTCTGCTCTCACTGCCGTAAAACATGGCAACTGCAGTTCACTTACACCGCTTCT                        <  2:749211/229‑1
                                                                                                                                                                                                        TGAAAAGATATTTA‑‑TTGGCGGCACAAGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGTTTCTATCAGCTGTTCCTCCTTTTCAGCTACTGACGGGGTGGTGCGTAACGGCCAAAACACCGCCGGACATCAGGCCCACCCCTCTCTTCACTGCCGTAAAACATGGCAACTGCAGGTCACTTTACCCGCTTCTCAA                     >  1:76938/1‑228
                                                                                                                                                                                                          AAAAGATTTTTA‑‑TTGGCGGCACAAGGTGATGGTGCCAATTTACTGATTTATTGTATGATGGTTTTTTTGAGGTGCTCCAGTGGCTTCTGTTTCTATCAGCTGTCCCTCCTGTTCAGCTACTGACGGGGTGGTGCGTAACGGCAAAAGCACCGCCGGACATCAGCGCTATCTCTGCTCTCACTGCCGTAAAACATGGCAACTGCAGTTCACTTACACCGCTTCTCAACC                   <  1:174377/228‑1
                                                                                                                                                                                                            AAGATATTTA‑‑TTGGCGGCACAAGGTGATGCTGCCAACTTACTGATTTAGTGGATGATGGAGGTTTTGAGGTGCTCCATTGGCTTCTGTTTCTATCAGCTGTCCCTCCTGTTCAGCTACTGACGGGGTGGTGCGTAACGGCAAAAGCACCGCCGGCCATCAGCGCTATCTCTGCTCTCACTGCCGTTAAACATGGCAACTGCAGTTCACTTACAACACTTCTCAACCCGc                >  2:526375/1‑228
                                                                                                                                                                                                                            CGGCACAAGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTTTTTCTATCAGCTGTCCCTCCTGTTCAGCTAATGACGGGGTGGTGCGTCACGGCCAAAGCACCGCCGGACATCAGCGCTATCTCTGCTCCCACTGCCGCAAAACATGGCAACTGCAGTTTAATTACACCGCTTTTCAACCCGGGAAGCACCCGAAAA  >  1:472628/1‑229
                                                                                                                                                                                                                                                                                                                                                                                                                                                                   
ATTGCGACTGTTCTACTTTTCATCATTCGCTTAATAGGGAATTCTCGTAAACACAACTAATACAGAAGACTGAAAGGTCGTCAGCCTACGATAATCTCCCCATAAAATGTGACATGAATCAGGAAGTTTTAACCTCACGT‑‑GCTGCGAAATCATCGGTGTAAATAGGGCTATATGCCGCGTCTTTTCTGGCTAATTTTATGAAAAGATATTTA‑‑TTGGCGGCACAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_000913/1293255‑1293032
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑GGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGTTTCTATCAGCTGTCCCTCCTGTTCAGCTACTGACGGGGTGGTGCGTAACGGCAAAAGCACCGCCGGACATCAGCGCTATCTCTGCTCTCACTGCCGTAAAACATGGCAACTGCAGTTCACTTACACCGCTTCTCAACCCGGTACGCACCAGAAAA  <  NC_000913/1979270‑1979050

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.