New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 3041643141 (1.120)4 (0.030) 4/486 NT 3.1% coding (331/981 nt) ygfZ iron‑sulfur cluster repair protein, plumbagin resistance
?NC_000913 = 3042745 113 (0.940)coding (404/660 nt) yqfA hemolysin III family HylIII inner membrane protein
Rejected: Frequency below/above cutoff threshold.

GGCTTCTGCCCGTTTACCGCTGACGCTGATGACGCTTGATGACTGGGCGCTTGCCACCATTACTGGCGCGGACAGCGAAAAATATATGCAGGGTCAGGTGACAGCAGATGTCAGCCAGATGGCAGAAGATCAGCACCTGCTCGCCGCCCATTGCGACGCCAAAGGTAAAATGTGGAGCAATTTACGTCTGTTCCGCGACGGCGATGGCTTTGCATGGATTGAACGGCGCAGCGTGCGTGAACCGCAGCTGACTGAACTGAAAAAATATGCGGTATTCTCTAAAGTGACCATCGCGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_000913/3041348‑3041643
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgaccatcgcgcACCGATTCAAAATTTTATCTCTGGTGACCTATCTGGCGATGGGCTGGCTGTCGCTGGTGGTAATTTATGAAATGGCAGTTAAGCTCGCGGCGGGCAGCGTTACCTTACTGGCGGTAGGCGGCGTGGTTTATTCGCTCGGGGTGATTTTCTACGTCTGCAAACGCATTCCATACAACCATGCCATCTGGCACGGCTTCGTGCTCGGCGGTAGTGTGTGCCACTTTCTGGCGATCTATTTGTATATTGGGCAGGCGTAATGGGTATGCCTTTGTAGGCCTGA  <  NC_000913/3042745‑3042466
                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                
GGCTTCTGCCCGTTTACCGCTGACGCTGATGACGCTTGATGACTGGGCGCTTGCCACCATTACTGGCGCGGACAGCGAAAAATATATGCAGGGTCAGGTGACAGCAGATGTCAGCCAGATGGCAGAAGATCAGCACCTGCTCGCCGCCCATTGCGACGACAAAGGTAAAATGTGGAGCAATTTCCGTCTGTTCCGCGACGGCCATGGCTTTGCCCGGATTTACCGGCCCCGAGTCCTTGAACCGACACTGACTGCACTGAAAAAACAGGAGGTATTCCCCAAAGTacc                                                                                                                                                                                                                                                                                                  >  2:1120799/1‑285
     CTGCCCGTTTACCGCTGACGCTGATGACGCTTGCTGACTGGGCGCTTGCCACCATTACTGGCGCGGACAGCGAAAAATATATGCAGGGTCAGGTGACAGCAGATGTCAGCCAGCTGGCAGAAGATCAGCACCTGCTCGCCGCCCATTGCGACGCCAAAGGTAAAATGTGGAGCAATTTCCGTCTGTTCCGCGACGGCGATGGCTTTGCATGGATTGAACGGCGCCGAGTGCGTGAACCGCAGCTGTCTGCACTGCAACAATATTCGGTATTCCTCAAAGTTACCATCG                                                                                                                                                                                                                                                                                             >  2:337371/1‑288
     CTGCCCGTTTACCGCTGACGCTGATGACGCTTGATGACTGGGCGCTTGCCACCATTACTGGCGCGGACAGCGAAAAATATATGCAGGGTCAGGTGACAGCAGATGTCAGCCAGATGGCAGAAGATCAGCACCTGCTCGCCGCCCATTGCGACGCCAAAGGTAAAATGTGGAGCAATTTACGTCTGTTCCGCGACGGCGATGGCTTTGCATGGATTGAACGGCGCAGCGTGCGTGAACCGCAGCTGACTGAACTGAAAAAATATGCGGTATTCTCTAAAGTGACCATCGC                                                                                                                                                                                                                                                                                            >  2:913624/1‑289
     CTGCCCGTTTACCGCTGACGCTGATGACGCTTGATGACTGGGCGCTTGCCACCATTACTGGCGCGGACAGCGAAAAATATATGCAGGGTCAGGTGACAGCAGATGTCAGCCAGATGGCAGAAGATCAGCACCTGCTCGCCGCCCATTGCGACGCCAAAGGTAAAATGTGGAGCAATTTACGTCTGTTCCGCGACGGCGATGGCTTTGCATGGATTGAACGGCGCAGCGTGCGTGAACCGCAGCTGACTGAACTGAAAAAATATGCGGTATTCTCTAAAGTGACCATCG                                                                                                                                                                                                                                                                                             >  2:634074/1‑288
                                                                                                                            GAAGACCAGCACCTGTTCGCCGCCCATTGCGACGCGAAAGGTAAAATGTGGAGCAATTTACGTCTGTTCCGAGACGGCGATGGATTTGCATGGATTGAACGGCGCTGCGTGCGTGAACCGCAGCTGACTGTACTGAAAAAATATGCGGTATTCTCTAAAGTGACCATCCCGCACCGATCCAAAATTTTATTTCTGGTGACCTATCTGGCGATGGGCTGGCTGTCGCTGGTGGTAATGTATGAAATGGCAGTTAAGCTGGCGGCGGGCAGAGTTCTCTTTCTGGCGGGAG                                                                                                                                                                     >  2:229446/1‑289
                                                                                                                                 TCAGCACCTGCTCGCCGCCCATTGCGACGCCAAAGGTAAAATGTGGAACAATTTACGTCTGTTCCGCGACGGCGATGGCTTTGCATGGATTGAACGGCGCAGCGTGCGTGAACCGCAGCTGACTGAACTGAAAAAATATGCGGTATTCTCTAAAGTGACCATCGCGCACCGATTCAAAATTTTATCTCTGGTGACCTATCTGGCGATGGGCTGGCTGTCGCTGGTGGTAATTTATGAAATGGCAGTTAAGCTCGCGGCGGGCAGCGTTACCTTACTGGCGGTAGGCGG                                                                                                                                                                 <  1:229446/288‑1
                                                                                                                                                                                               TCCGCGACGGCGATGGCTTTGCATGGATTGAACGGCGCAGCGTGCGTGAACCGCAGCTGACTGAACTGAAAAAATATGCGGTATTCTCTAAAGTGACCATCGCGCACCGATTCAAAATTTTATCTCTGGTGACCTATCTGGCGATGGGCTGGCTGTCGCTGGTGGTAATTTATGAAATGGCAGTTAAGCTCGCGGCGGGCAGCGTTACCTTACTGGCGGTAGGCGGCGTGGTTTATTCGCTCGGGGTGATTTTCTACGTCTGCAAACGCATTCCATACAACCATGCCA                                                                                                   >  2:372464/1‑288
                                                                                                                                                                                                                                                                                 ATTCTCTAAAGTGACCATCGCGCACCGATTCAAAATTTTATCTCTGGTGACCTATCTGGCGATGGGCTGGCTGTCGCTGGTGGTAATTTATGAAATGGCAGTTAAGCTCGCGGCGGGCAGCGTTACCTTACTGGCGGTAGGCGGCGTGGTTTATTCGCTCGGGGTGATTTTCTACGTCTGCAAACGCATTCCATACAACCATGCCATCTGGCACGGCTTCGTGCTCGGCGGTAGTGTGTGCCACTTTCTGGCGATCTATTTGTATATTGGGCAGGCGTAATGGGTATGC                <  1:372464/289‑1
                                                                                                                                                                                                                                                                                             GACCATCGCGCACCGATTCAAAATTTTATCTCTGGTGACCTATCTGGCGATGGGCTGGCTGTCGCTGGTGGTAATTTATGAAATGGCAGTTAAGCTCGCGGCGGGCAGCGTTACCTTACTGGCGGTAGGCGGCGTGGTTTATTCGCTCGGGGTGATTTTCTACGTCTGCAAACGCATTCCATACAACCATGCCATCTGGCACGGCTTCGTGCTCGGCGGTAGTGTGTGCCACTTTCTGGCGATCTCTTTGTATATTGTGCAGGCGTAAGGGGTATGCCTTTGGAGG       >  2:547783/1‑286
                                                                                                                                                                                                                                                                                             GACCATCGCGCACCGATTCAAAATTTTATCTCTGGTGACCTATCTGGCGATGGGCTGGCTGTCGCTGGTGGTAATTTATGAAATGGCAGTTAAGCTCGCGGCGGGCAGCGTTACCTTACTGGCGGTAGGCGGCGTGGTTTATTCGCTCGGGGTGATTTTCTACGTCTGCAAACGCATTCCATACAACCATGCCATCTGGCACGGCTTCGTGCTCGGCGGTAGTGTGTGCCACTTTCTGGCGATCTATTTGTATATTGGGCAGGCGTAATGGGTATGCCTTTGTAGG       >  1:238870/1‑286
                                                                                                                                                                                                                                                                                             GACCATCGCGCACCGATTCAAAATTTTATCTCTGGTGACCTATCTGGCGATGGGCTGGCTGTCGCTGGTGGTAATTTATGAAATGGCAGTTAAGCTCGCGGCGGGCAGCGTTACCTTACTGGCGGTAGGCGGCGTGGTTTATTCGCTCGGGGTGATTTTCTACGTCTGCAAACGCATTCCATACAACCATGCCATCTGGCACGGCTTCGTGCTCGGCGGTAGTGTGTGCCACTTTCTGGCGATCTATTTGTATATTGGGCAGGCGTAATGGGTATGCCTTTGTAGG       >  1:570125/1‑286
                                                                                                                                                                                                                                                                                               CCATCGCGCACCGATTCAAAATTTTATCTCTGGTGACCTATCTGGCGATGGGCTGGCTGTCGCTGGTGGTAATTTATGAAATGGCAGTTAAGCTCGCGGCGGGCAGCGTTACCTTACTGGCGGTAGGCGGCGTGGTTTATTCGCTCGGGGTGATTTTCTACGTCTGCAAACGCATTCCATACAACCATGCCATCTGGCACGGCTTCGTGCTCGGCGGTAGTGTGTGCCACTTTCTGGCGATCTATTTGTATATTGGGCAGGCGTAATGGGTATGCCTTTGTAGGCCTGA  >  1:105897/1‑289
                                                                                                                                                                                                                                                                                               CCATCGCGCACCGAATCAAAATTTTATATCTGGTGACCTATCTGGCGATGGGCTGGCTGTCGCTGGTGGTAATTTATGAAATGGCAGTTAAGCTCGCGGCGGGCAGCGTTACCTTACTGGCGGGAGGCGGCGTGGTTTATTCGCTCAGGGTGATTTTCTACGTCTGCAAAAGAATTCCATCCAACCATGCCATCTGGCACGGCCTCGTGCTAGGGGGTAGTGGGTGCCCCTGTATGGCTATCTATTTGTATATTGGGCCGGCGTACTGGGTATGCCTTTGTAGGCTTGA  >  2:766193/1‑289
                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                
GGCTTCTGCCCGTTTACCGCTGACGCTGATGACGCTTGATGACTGGGCGCTTGCCACCATTACTGGCGCGGACAGCGAAAAATATATGCAGGGTCAGGTGACAGCAGATGTCAGCCAGATGGCAGAAGATCAGCACCTGCTCGCCGCCCATTGCGACGCCAAAGGTAAAATGTGGAGCAATTTACGTCTGTTCCGCGACGGCGATGGCTTTGCATGGATTGAACGGCGCAGCGTGCGTGAACCGCAGCTGACTGAACTGAAAAAATATGCGGTATTCTCTAAAGTGACCATCGCGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_000913/3041348‑3041643
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgaccatcgcgcACCGATTCAAAATTTTATCTCTGGTGACCTATCTGGCGATGGGCTGGCTGTCGCTGGTGGTAATTTATGAAATGGCAGTTAAGCTCGCGGCGGGCAGCGTTACCTTACTGGCGGTAGGCGGCGTGGTTTATTCGCTCGGGGTGATTTTCTACGTCTGCAAACGCATTCCATACAACCATGCCATCTGGCACGGCTTCGTGCTCGGCGGTAGTGTGTGCCACTTTCTGGCGATCTATTTGTATATTGGGCAGGCGTAATGGGTATGCCTTTGTAGGCCTGA  <  NC_000913/3042745‑3042466

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 9 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.