Predicted mutation
evidence seq id position mutation annotation gene description
JC JC NC_000913 1,293,032 IS1 (–) +8 bp intergenic (‑110/‑488) hns ← / → tdk global DNA‑binding transcriptional dual regulator H‑NS/thymidine kinase/deoxyuridine kinase

New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 257908 =NA (NA)47 (1.160) 39/284 0.1 100% noncoding (768/768 nt) IS1 repeat region
?NC_000913 = 1293039 0 (0.000)intergenic (‑117/‑488) hns/tdk global DNA‑binding transcriptional dual regulator H‑NS/thymidine kinase/deoxyuridine kinase
* ? NC_000913 1293032 =0 (0.000)44 (1.090) 39/284 0.1 100% intergenic (‑110/‑495) hns/tdk global DNA‑binding transcriptional dual regulator H‑NS/thymidine kinase/deoxyuridine kinase
?NC_000913 = 1979270 NA (NA)noncoding (1/768 nt) IS1 repeat region

CAGAATTTTAAGTGCTTCGCTCATTGTAGTAATCTCAAACTTATATTGGGGTGGTTTGTTGAGGTAATAATAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCGATGATTTCGCAGCACGTGAGGTTAAAACTTCCTGATTCATGTCACATTTTATGGGGAGATTATCGTAGGC  >  NC_000913/1292899‑1293172
                                                                                                                                            |                                                                                                                                     
cAGAATTTTAAGTGCTTCGCTCATTGTAGTAATCTCAAACATATATTGGGGTGGTTTGTTGAGGTAATAATAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGgg                                                                                                                                     <  2:714086‑M2/143‑3 (MQ=255)
  cggcggtgcttttgccgttacgcaccaccccgtcagtagctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccTTGTGCCGCCaa                                                                                                                                   <  1:481151‑M1/12‑1 (MQ=255)
    tttttaAGTGCTTCGCTGATTGTAGTAATCTCAAACTTATAGTGGGGTGGTTTGTTGAGGTAATAATAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGggtaat                                                                                                                                 >  1:231388‑M2/2‑137 (MQ=255)
    aTTTTAAGTGCTTCGCGCATTGTAGTAATCTCAAACGTATATTGGGGTGGTTTGTTGAGGTAATAATAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGggtaat                                                                                                                                 >  1:235754‑M2/1‑137 (MQ=255)
       gtgcttttgccgttacgcaccaccccgtcagtagctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccTTGTGCCGCCaataaat                                                                                                                              <  1:296617‑M1/17‑1 (MQ=255)
            tGCTTCGCTCATTGTAGTAATCTCACACTTATATTGGGGTGGTTTGTTGAGGTAATAATAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGCATGTAAGGAATTCCAAGTTGTCCTTTATTTTTTGCCGggtcatgactccta                                                                                                                         <  1:340278‑M2/143‑15 (MQ=255)
              cTTCGCTCATTGTAGTAATCTCAAACTTATATTGGGGTGGTTTGTTGAGGTAATAATAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGggtaatgactccaact                                                                                                                       <  2:654886‑M2/143‑17 (MQ=255)
              cTTCGCTCATTGTAGTAATCTCAAACTTATATTGGGGTGGTTTGTTGAGGTAATAATAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGggtaatgactccaact                                                                                                                       <  1:323252‑M2/143‑17 (MQ=255)
               ttCGCTCATTGTAGTAATCTCAAACTTATATTGGGGTGGTTTGTTGAGGTAATAATAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGggtaatgactccaactt                                                                                                                      <  1:682481‑M2/143‑18 (MQ=255)
               gccgttacgcaccaccccgtcagtagctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccTTGTGCCGCCAATAAATATCTTTTc                                                                                                                      >  2:420266‑M1/119‑143 (MQ=255)
                tCGCTCATTGTAGTAATCTCAAACTTATATTGGGGTGGTTTGTTGAGGTAATAATAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGggtaatgactccaactta                                                                                                                     >  1:610063‑M2/1‑125 (MQ=255)
                  gttacgcaccaccccgtcagtagctgaacaggagggacagctgatagaaacagaagccgctggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccATGTGACGCCAATAAatatctttacaaa                                                                                                                   <  1:615466‑M1/28‑6 (MQ=255)
                  gCTCATTGTAGTAATCTCAAACTTATATTGGGGTGGTTTGTTGAGGTAATAATAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGggtaatgactccaacttatt                                                                                                                   <  1:433390‑M2/143‑21 (MQ=255)
                    tCATTGTAGTAATCTCAAACTTATATTGGGGTGGTTTGTTGAGGTAATAATAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTTTTTATTTTGTGCCGggtaatgactccaacttattga                                                                                                                 >  1:341265‑M2/1‑121 (MQ=255)
                      cgcaccaccccgtcagtagctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccTTGTGCCGCCAATAAATATCTTTTCATAAAAt                                                                                                               >  1:449652‑M1/112‑143 (MQ=255)
                       ttGTAGTAATCTCAAACTTATATTGGGGTGGTTTGTTGAGGTAATAATAGAGCCTTAAATTGAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGggtacagaccccaacttattgatag                                                                                                              <  2:699237‑M2/143‑26 (MQ=255)
                          ccaccccgtcagtagctgaacaggagggacagctgataggatcagcagccactcgagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGc                                                                                                           >  1:651365‑M1/108‑143 (MQ=255)
                           caccccgtcagtagctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccTTGTGACGCCAATAAATATCTTTTCATAAAATTAGcc                                                                                                          <  1:236989‑M1/37‑1 (MQ=255)
                              cccgtcagtagctgaacaggagggacagctgatagcaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGa                                                                                                       <  2:184563‑M1/40‑1 (MQ=255)
                               ccgtcagtagctgaacaggcgggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcaggaagttggcagcatcaccTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGaa                                                                                                      >  1:502841‑M1/103‑143 (MQ=255)
                               aTCTCAAACTTATATTGGGGTGGTTTGTTGAGGTAATAATAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGggtaatgactccaacttattgatagtgttttat                                                                                                      >  1:412018‑M2/1‑110 (MQ=255)
                                   cAAACTTATATTGGGGTGGTTTGTTGAGGTAATAATAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGCATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGggtaatgactccaacttattgatagtgttttatgtgc                                                                                                  <  2:423511‑M2/143‑38 (MQ=255)
                                   cAAACTTATAGTGGGGTGGTTTGTTGAGGTAATAATAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGggtaatgactccaacttattgatagtgttttatgttc                                                                                                  >  1:713916‑M2/1‑106 (MQ=255)
                                       agctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccTTGTGCCGCCCATAAATATCTTTTCATAAAATTACCCAGAAAAGacgcc                                                                                              <  2:594162‑M1/49‑2 (MQ=255)
                                        gctgaacaggagggacagctgatagaaacagaagctactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCgg                                                                                             <  1:636506‑M1/50‑1 (MQ=255)
                                          tgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGACAAGACGCGGCa                                                                                           <  2:462494‑M1/52‑1 (MQ=255)
                                           tatTGGGGTGGTTTGTTGAGGTAATAATAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAGTTGTTCTTTATTTTGTGCCGggtaatgactccaacttattgatagtgttttatgttcagataatg                                                                                          <  2:40013‑M2/143‑46 (MQ=255)
                                           tatTGGGGTGGTTTGTTGAGGTAATAATAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGggtaatgactccaacttattgatagtgttttatgttcagataatg                                                                                          <  2:384201‑M2/143‑46 (MQ=255)
                                            gttgGGGTGGTGTGTTGAGGCAATAATAGAGCCTTAAATTCAGTTGTGCTATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGggtaatgactccaacttattgatagtgttttatgttcagataatgc                                                                                         >  2:566656‑M2/2‑97 (MQ=255)
                                            atTGGGGTGTTTTGGGAAGGTAATAATAGACCCTTAAATTCAGTTGTGTAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGggtaatgactccaacttatggatagtgttttatgttcagataatgc                                                                                         >  2:198452‑M2/1‑97 (MQ=255)
                                             ttGGGGTGGTTTGTTGAGGTAATAATAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGggtaatgactccaacttattgctcgtgtttgattgtcagataatgcc                                                                                        <  2:284878‑M2/143‑48 (MQ=255)
                                              caggagggacagctgatagaaacacaagcctctggcgcgcctcaaaaacaccatcatacactcaatcagtaagttggcagcatcaccTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCAtata                                                                                       >  1:366794‑M1/88‑143 (MQ=255)
                                                gggTGGTTTGTTGAGGTAATAATAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGggtaatgactccaacttattgatagtgttttatgttcagataatgcccga                                                                                     <  2:721515‑M2/143‑51 (MQ=255)
                                                 ggtggtTTGTTGAGGTAATAATAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgat                                                                                    >  2:196488‑M2/1‑92 (MQ=255)
                                                     gtTTGTTGAGGTAATGATAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgact                                                                                >  2:470836‑M2/1‑88 (MQ=255)
                                                      acaacggacagcaactgaagccactggagcacctcaaaaacaccatcatccactaaatcagtaagttggcagcattaccTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTAtt                                                                               >  2:626733‑M1/80‑143 (MQ=255)
                                                       ttgttgAGGTAATAATAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgacttt                                                                              <  1:430515‑M2/143‑58 (MQ=255)
                                                          ttgAGGTAATAATAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtc                                                                           <  2:568798‑M2/143‑61 (MQ=255)
                                                          tggagGTAATAATAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtc                                                                           >  1:216144‑M2/3‑83 (MQ=255)
                                                           tgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTacac                                                                          <  2:398415‑M1/69‑1 (MQ=255)
                                                            gatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACAcc                                                                         <  2:570881‑M1/70‑1 (MQ=255)
                                                               agaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCgat                                                                      >  2:448045‑M1/71‑143 (MQ=255)
                                                                taataaTAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcag                                                                     <  1:491436‑M2/143‑67 (MQ=255)
                                                                taataaTAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcag                                                                     >  2:658879‑M2/1‑77 (MQ=255)
                                                                gaagaatgGGGCCTTAAATTCAGTTTGGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcag                                                                     >  2:280265‑M2/2‑77 (MQ=255)
                                                                   acagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCAATTTACACCGATGAtt                                                                  <  1:707673‑M1/77‑1 (MQ=255)
                                                                   acagaagacactggagcacctcaaaaacaccatcatgcactaaatcagtaagttggcagcatcaccTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCGATGAtt                                                                  >  2:49655‑M1/67‑143 (MQ=255)
                                                                      taGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccac                                                               >  1:654886‑M2/1‑71 (MQ=255)
                                                                      gaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccTTGTGCCGCCAATAACTATCTATTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCGAtgattgcg                                                               <  2:255146‑M1/80‑4 (MQ=255)
                                                                      gaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCGATGATTTCg                                                               <  2:219745‑M1/80‑1 (MQ=255)
                                                                       aagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCGATGATTTCgc                                                              <  1:471910‑M1/81‑1 (MQ=255)
                                                                         agCCTTAAATTCCGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTAGTTTGTGCAGggtagtgactccaacttattgatagtgttttatgttcagataatgcccgatcacattgtgatgcggccccgccgc                                                            <  2:442316‑M2/143‑76 (MQ=255)
                                                                           ccTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGggtaatgactccaacttattgatagtgttttatgttcagataacgcccgatgactttgtcatgcagctccaccgctt                                                          <  2:488095‑M2/143‑78 (MQ=255)
                                                                           ccTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGgggaatgactccaacttattgatagtgttttatgttcagataatgcccgatgtctttatcatgcagctccaccgatt                                                          <  2:346523‑M2/143‑78 (MQ=255)
                                                                            cTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgccgctcccccgcctt                                                         <  1:51938‑M2/143‑79 (MQ=255)
                                                                            actggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCGATGATTTCGCAGCAc                                                         <  1:542311‑M1/86‑1 (MQ=255)
                                                                               tgatgCAGTTGTGCGATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttga                                                      >  1:367622‑M2/3‑62 (MQ=255)
                                                                               gagtttagtGGTGTTATAGCCAGGATTGTAAGGAATTCAAACTTGTTTTTTATTTTGTGTCGggtaatgactccaacttattgatagtgttttatgttcggataatgcccgatgactttgtcatgcagctccaccgattttga                                                      >  2:13530‑M2/4‑62 (MQ=255)
                                                                                   tCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaac                                                  >  2:581355‑M2/1‑58 (MQ=255)
                                                                                     cctcaaaaccaccatctttctctaaatcagtaagttggcagcatcaccTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCGATGATTTCGCAGCACGTGAGGTTa                                                >  1:451475‑M1/49‑143 (MQ=255)
                                                                                     cctcaaaaacaccatcatacactaaatcagtaagttggcagcttcaccTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCGATGATTTCGCAGCACGTGAGGTTa                                                <  1:474470‑M1/95‑1 (MQ=255)
                                                                                     aGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGggtaatgaatccaactgattgatagtgttttatgttcagataaggcccgatgactttgtcatgcagctccacaggtttggagaacgg                                                <  2:333839‑M2/143‑88 (MQ=255)
                                                                                      ctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCGCTATTTACACCGATGATTTCGCAGCACGTGAGGTTaa                                               <  1:635186‑M1/96‑1 (MQ=255)
                                                                                      ctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCGATGATTTCGCAGCACGTGAGGTTaa                                               <  1:29157‑M1/96‑1 (MQ=255)
                                                                                       tcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCGATGATTTCGCAGCACGTGAGGTtaac                                              <  1:55875‑M1/97‑2 (MQ=255)
                                                                                       tcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCGATGATTTCGCAGCACGTGAGGTTaaa                                              <  1:459583‑M1/97‑1 (MQ=255)
                                                                                               accatcatacactaaatcagtaagttggcagcatcaccTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCGATGATTTCGCAGCACGTGAGGTTAAAACTTCCTg                                      <  1:15379‑M1/105‑1 (MQ=255)
                                                                                                  ccAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgt                                   <  1:30784‑M2/143‑101 (MQ=255)
                                                                                                  atcatacactaaatcagtaagttggcagcatcaccTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGACATATTTACACCGATAATATCGCAGCAAGAGAGGTTACAATTTCATGAtt                                   <  2:81536‑M1/108‑1 (MQ=255)
                                                                                                  atactacactaaatcagtaagttggcagcatcaccTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCGATGATTTCGCAGCACGTGAGGTTAAAACTTCCTGAtt                                   >  1:668538‑M1/36‑143 (MQ=255)
                                                                                                        cactaaatcagtaagttggcagcatcaccTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCGATGATTTCGCAGCACGTGAGGTTAAAACTTCCTGATTCATGTc                             >  1:184563‑M1/30‑143 (MQ=255)
                                                                                                         tGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGggtaatgactccagcgtagtgatagtgttttatgttcagataatgcccgatgacgttgtcatgcagctccaccgattttgagaacgacagcgacttccgtccccgcc                            <  1:499705‑M2/143‑108 (MQ=255)
                                                                                                         actaaatcagtaagttggcagcatcaccTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCGATGATTTCGCAGCACGTGAGGTTAAAACTTCCTGATTCATGTca                            <  1:615493‑M1/115‑1 (MQ=255)
                                                                                                           tatatcagtaagttggcagcatcaccTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCGATGATTTCGCAGCACGTGAGGTTAAAACTTCCTGATTCATGTcaca                          >  2:303170‑M1/27‑143 (MQ=255)
                                                                                                           tAAGGAATTCAAAATTTTTCTTGATTTTGTGCCGggtaatgactccaacttattgatagtgttttatgttcagataatgccccatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtcccagccgt                          >  2:32255‑M2/1‑34 (MQ=255)
                                                                                                               tcagtaagttggcagcatcaccTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCGATGATTTCGCAGCACGTGAGGTTAAAACTTCCTGATTCATGTCACAtttt                      >  1:25142‑M1/23‑143 (MQ=255)
                                                                                                                 agtaagttggcagcatcaccTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCGATGATTTCGCAGCACGTGAGGTTAAAACTTCCTGATTCATGTCACCTTTTAt                    <  2:527596‑M1/123‑1 (MQ=255)
                                                                                                                  gtaagttggcagcatcaccTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCGATGATTTCGCAGCACGTGAGGTTAAAACTTCCTGATTCATGTCACATTTTATg                   >  1:398415‑M1/20‑143 (MQ=255)
                                                                                                                   tCAAAATTGTTCTTTATTTTGTGCGGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtcccagccgtgccaggtg                  >  2:340278‑M2/1‑26 (MQ=255)
                                                                                                                     agttggcagcatcaccTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCGATGATTTCGCAGCACGTGAGGTTAAAACTTCCTGATTCATGTCACATTTTATgggg                >  1:644031‑M1/17‑143 (MQ=255)
                                                                                                                      aaaTTGTTCTTTATTTTGTGCCGggtaatgactccaacttagtgatagtggtttatgttcagataatgcccgatgactttgtcatccagctccaccgatttttagaacgacagcgacttccgtcccagccgtgccaggtgctg               <  1:731567‑M2/143‑121 (MQ=255)
                                                                                                                       aaTTGTTCTTTATTTTTGGCAGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgaggacgttgtcatacagctccaccgattttgagaacgacagcgacttccgtcccagccgtgccaggtgctgc              >  1:92070‑M2/1‑22 (MQ=255)
                                                                                                                         ggcagcatcaccTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCGATGATTTCGCAGCACGTGAGGTTAAAACTTCCTGATTCATGTCACATTTTACGGGGAGAt            <  2:302132‑M1/131‑1 (MQ=255)
                                                                                                                             gcatcaccTGGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCGATGATTTCGCAGCTCGTGAGGTTAAAACTTCCTGATTCATGTCACATTTTATGGGGAGATTATc        >  1:476828‑M1/9‑143 (MQ=255)
                                                                                                                              catcaccTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCGATGATTTCGCAGCACGTGAGGTTAAAACTTCCTGATTCATGTTACATTTTATGGGGAGATTATCg       <  1:41215‑M1/136‑1 (MQ=255)
                                                                                                                               tttATTTTGTGCCGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtcccagccgtgccaggtgctgcctcagatt      <  1:558779‑M2/143‑130 (MQ=255)
                                                                                                                               ttcATTTTGTGCCGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtcccagccgtgccaggtgctgcctcagatt      >  1:229679‑M2/1‑14 (MQ=255)
                                                                                                                               atcaccTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATCTACACCGATGATTTCGCAGCACGGGAGCGAAAAACTTCCTGATTCATGTCACATTCTATGGGGAGATTATcgc      <  1:691593‑M1/137‑2 (MQ=255)
                                                                                                                                  aTTTTGTGCCGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtcccagccgtgccaggtgctgcctcagattcag   >  1:284878‑M2/1‑11 (MQ=255)
                                                                                                                                  aTTTTGTGCCGggtaatgactccaacttattgatagtgttgtatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtcccagccgtgccaggtgctgcctcagattcag   >  1:294085‑M2/1‑11 (MQ=255)
                                                                                                                                   ccTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCGATGATTTCGCAGCACGTGAGGTTAAAACTTCCTGATTCATGTCACATTTTATGGGGAGATTATCGTAGGc  >  1:498092‑M1/3‑143 (MQ=255)
                                                                                                                                            |                                                                                                                                     
CAGAATTTTAAGTGCTTCGCTCATTGTAGTAATCTCAAACTTATATTGGGGTGGTTTGTTGAGGTAATAATAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCGATGATTTCGCAGCACGTGAGGTTAAAACTTCCTGATTCATGTCACATTTTATGGGGAGATTATCGTAGGC  >  NC_000913/1292899‑1293172

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.