New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	= 21213	28 (1.040)	3 (0.120)	3/268	3.6	10.3%	coding (33/219 nt)	yaaY	uncharacterized protein
	?	NC_000913	= 21294	26 (1.030)					coding (114/219 nt)	yaaY	uncharacterized protein
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

TTAGCCAAGGTCCAACTCCCAAATGTGTTCTATATGGACAATTCAAAGGCCGAGGAATATGCCCTTTTAGCCTTCTTTTGTCAATGGATTTGTGCAAATAAGCGCCGTTAATGTGCCGGCACTCGTTACGTAGTGATGGCGCAGGATTCTACCAGCTTGCGGGGTGTGAATACAGCTTTTCCGCGATAAAAATTGCAGCAGGCGGTCAGTTTCTTCCCGTGATTTGCGCCATGGCAATGAAAAGCCACTTCTTTCTGATTTCGGTACTCAATCGCCGGTTAACCT  >  NC_000913/21071‑21355                                                                                                                                               |                                                                                                                                               gcacccATGGTCCAACTCCCAAATGTGTGCTATATGGACAATTCAAAGGCCGAGGAATATGCCCTTTTAGCCGTCTTTTGTCAATGGATTTGTGCAAATAAGCGCCGTTAATGTGCCGGCACTCGTTACGTAGTGATGGCGCa                                                                                                                                                <  1:325567/139‑1 (MQ=255)  tAGCCAAGGTCCAACTCCCAAATGTGTTCTATATGGACAATTCAAAGGCCGAGGAATATGCCCTGTTAGCCTTCTTTTGTCAATGGATTTGTGCAAATAAGCGCCGTTAATGTGCCGGCACTCGTTACGTAGTGATGGCGCAg                                                                                                                                               >  2:386108/1‑143 (MQ=255)    gCCAGGGTCCAACTCCCAAATGTGGTCTATATGGACAAGGGAAAGGTCGAGGAATATGCTCTTTTAGCCTTCTTTTGGCAATGGATTGGTGCAAATAAGCGCCGTTAATGTGCCGGCACTCGTTACGTAGTGATGGCGCAGGa                                                                                                                                             <  1:275918/143‑1 (MQ=255)    gCCAAGGTCCAACTCCCAAATGTGTTCTATATGGACAATTCAAAGGCCGAGGAATATGCCCTTTTAGCCTTCTTTTGTCAGTGGCTTTGTGCAAATAAGCTCCGTTAATGTGCCGGCACTCGTTACGTAGTAATGGCACAAGa                                                                                                                                             >  1:242937/1‑143 (MQ=255)    gCCAAGGTCCAACTCCCAAATGTGTTCTATATGGACAATTCAAAGGCCGAGGAATATGCCCTTTTAGCCTTCTTTTGTCAATGAATTTGTGCAAATAAGCGCCGTTAATGTGCCGGCACTCGTTACGTAGTGATGGCGCAGGa                                                                                                                                             >  2:238890/1‑143 (MQ=255)     ccAAGGTCCAACTCCCAAATGTGTTCTATATGGACAATTCAAAGGCCGAGGAATATGCCCTTTTAGCCTTCTTTTGTCAATGGATTTGTGCAAATAAGCGCCGTTAATGTGCCGGCACTCGTTACGTAGTGATGGCGCAggct                                                                                                                                            >  1:5577/1‑141 (MQ=255)              aaCTCCCAAATGTGTTCTATATGGACAATTCAAAGGCCGAGGAATATGCCCTTTTAGCCTTCTTTTGTCAATGGATTGGTGCAAATAAGCGCCGTTAATGTGCCGGCCCTCGTTACGTAGGGGTGGCGCAGGATTCTACGAGc                                                                                                                                   >  2:127421/1‑143 (MQ=255)                   ccAAATGTGTTCTATATGGACAATTCAAAGGCCGAGGAATATGCCCTTTTAGCCTTCTTTTGTCAATGGATTTGTGCAAATAAGCGCCGTTAATGTGCCGGCACTCGTTACGTAGTGATGGCGCAGGATTCTACCAGCGTGCg                                                                                                                              >  2:266093/1‑143 (MQ=255)                     aaaTGTGTTCTATATGGACAATTCAAAGGCCGAGGAATATGCCCTTTTAGCCTTCTTTTGTCAATGGGATTGGGCAAATAAGCGCCGTTAATGTGCCGGCACTCGTTACGTTGTGATGGCGCAGGGTTCTACCCGCTTGgggg                                                                                                                            >  1:24876/1‑143 (MQ=255)                     aaaTGTGTGCTATATGGACAATTCAAAGGCCGAGGGATATGCCCTTTTAGCCTTCTTTTGTCAATGGATTTGTGCAAATAAGCGCCGTTAATGTGCCGGCACTCGTTACGTAGTGATGGCGCAGGATTCTACCAGCTTGCggg                                                                                                                            <  1:257750/143‑1 (MQ=255)                       aTGTGTTCTATATGGACAATTCAAAGGCCGATGAATATGCCCTTTTACCCTTCTTTTGTCAATGGATTTGTGCAAATAAGCGCCGTTAATGTGCCGGCACTCGTTACGTAGTGATGGCGCAGGATTCTACCAGCTTGCGGGgt                                                                                                                          <  2:437042/143‑1 (MQ=255)                               tataTGGACAATTCAAAGGCCGAGGAATATGCCCTTTTAGCCTTCTTTTGTCAATGGATTTGTGCAAATAAGCGCCGTTAATGTGCCGGCACTCGTTACGTAGTGATGGCGCAGGATTCTACCAGCTTGCGGGGTGTGAATAc                                                                                                                  <  1:273500/143‑1 (MQ=255)                                                     gggAATATGCCCTTTTAGCCTTCTTTTGTCAATGGATTTGTGCAAATAAGCGCCGTTAATGTGCCGGCACTCGTTACGTAGTGATGGCGCAGGATTCTACCAGCTTGCGGGGTGTGAATACAGCTTTTCCGCGATAAAAATTg                                                                                            <  2:328260/142‑1 (MQ=255)                                                     aGGAATATGCCCTTTTAGCCTTCTTTTGTCGATGGGTTTGTACAACTCGGTCGTGTGAATAGGCCGGCACTCGTTGCGTAGTGATGGCGCAGGATTCTACCAGCTTGCGGGGTGTGAATACAGCTTTTCCGCGATAAAAATTg                                                                                            <  1:222857/143‑1 (MQ=255)                                                     aGGAATATGCCCTTTTAGCCTTCTTTTGTCAATGGATTTGTGCAAATAAGCGCCGTTAATGTGCCGGCACTCGTTACGTAGTGATGGCGCAGGATTCTACCAGCTTGCGGGGTGTGAATACAGCTTTTCCGCGATAAAAATTg                                                                                            <  2:331624/143‑1 (MQ=255)                                                       gAATATGCCCTTTTAGCCTTCTTTTGTCAATGGAGTTGTGCAAATAAGCGCCGTTAATGTGCCGGCACTCGTTACGTAGTGATGGCGCAGGATTCTACCAGCTTGCGGGGTGTGAATACAGCTTTTCCGCGATAAAAATTgca                                                                                          <  1:462425/143‑1 (MQ=255)                                                            tgtccctttAGCCTTCCTTTGGCTAGGGATGTGTGCAAAGAAGCGCCGTTAATGTGCCGGCACTCGTTACGTAGTGATGGCGCATGATTCTACCAACTTGCGGGGTGTGAATACAGCTTTTCCGCGATAAAAATTGCAGCAgg                                                                                     <  2:88975/137‑1 (MQ=255)                                                                  tttAGCCTTCTTTTGTCAATGGATTTGTGCACCTACAGATCGATAGTGTGCCGTCTCTCGTTACGTAGTGATGGCGCAGGATTCTACCAGCTTGCGGGGTGTGAATACAGCTTTTCCGCGATAAACATTGCAGCAGGCGGTCa                                                                               >  1:333054/1‑143 (MQ=255)                                                                    ttggcttcttTTGTCAATGGGTTGGTGCATAGAAGCGCCTTTAATGTGCCGGCACTCGTGACGTAGTGATGGCGCAGTATTCTACCAGCTTGCGGGGTGTGAATACAGCTTTTCCGCGATAAAAATTGCAGCAGGCGGTCAGt                                                                             <  2:179060/139‑1 (MQ=255)                                                                       ccTTCTTTTGTCAATGGATTTGTGCAAATAAGCGCCGTTAATGTGCCGGCACTCGTTACGTAGTGATGGCGCAGGATTCTACCAGCTTGCGGGGTGTGAATACAGCTTTTCCGCGATAAAAATTGCAGCAGGCGGTCAGTttc                                                                          >  2:134811/1‑143 (MQ=255)                                                                          gcttGTGTCAATGGATTTGTGCCAATACGCGCCGTTAATGTGCCGGCACTCGTTACGTAGTGATGGCGCAGGATTCTACCAGCTTGCGGGGTGTGAATACAGCTTTTCCGCGATAAAAATTGCAGCAGGCGGTCAGTttcttc                                                                       <  1:127421/142‑1 (MQ=255)                                                                                gTCAATGGATTTGTGCAAATAAGCGCCGTTAATGTGCCGGCACTCGTTACGTAGTGATGGCGCAGGATTCTACCAGCTTGCGGGGTGTGAATACAGCTTTTCCGCGATAAAAATTGCAGCAGGCGGTCAGTTTCTTCCCGTGa                                                                 <  2:24876/143‑1 (MQ=255)                                                                                                 aaTAAGCGCCGTTAATGTGCCGGCACTCGTTACGTAGTGATGGCGCAGGATTCTACCAGCTTGCGGGGTGTGAATACAGCTTTTCCGCGATAAAAATTGCAGCAGGCGGTCAGTTTCTTCCCGTGATTTGCGCCATGGCAATg                                                >  1:76669/1‑143 (MQ=255)                                                                                                     ggcgcCGTTAATGTGCCGGCACTCGTTACGTAGTGATGGCGCAGGATTCTACCAGCTTGCGGGGTGTGAATACAGCTTTTCCGCGATAAAAATTGCAGCAGGCGGTCAGCTTCTTCCCGTGATTTGCGCCATGGCAATGaaaa                                            <  1:309321/142‑1 (MQ=255)                                                                                                                         aCTCGTTACGGAGTGATGGCGCAGGATTCTACCAGCTTGCGGGGTGTGAATACAGCTTTTCCGCGATAAAAATTGCAGCAGGCGGTCAGTTTCTTCCCGTGATTTGCGCCATGGCAATGAAAAGCCACTTCTTTCTGATTTCg                        <  1:340210/143‑1 (MQ=255)                                                                                                                             gTTACGTAGTGATGGCGCAGGATTCTACCAGCTTGCGGGGTGTGAATACAGCTTTTCCGCGATAAAAATTGCAGCAGGCGGTCAGTTTCTTCCCGTGATTTGCGCCATGGCAATGAAAAGCCACTTCTTTCTGATTTCGGTAc                    >  2:318565/1‑143 (MQ=255)                                                                                                                                   tAGTGATGGCGCAGGATTCTACCAGCTTGCGGGGTGTGAATACAGCTTTTCCGCGATAAAAATTGCAGCAGGCGGTCAGTTTTTTCGCGTGATTTGCGTCATGGCAATGAAAAGCCACTTCTTTGTGCTTTCGGTACTCGATc              >  1:90256/1‑143 (MQ=255)                                                                                                                                      tGATGGTGCAGGACTCTACCAGCTTGCGGGGTGTCAATACAGCTTTTCCGCGATAAAAATTGCAGCAGGCGGTCAGTTTCTTCCCGTGATTTGCGCCATGGCAATGAAAAGCCACTTCTTTCTGATTTCGGTACTCAATCGcc           <  2:362861/143‑1 (MQ=255)                                                                                                                                          ggCGCAGGATTCTACCAGCTTGCGGGGTGTGAATACAGCTTTTCCGCGATAAAAATTGCAGCAGGCGGTCAGTTTCTTCCCGTTATTTGCGCCATGGCAATGAAAAGCCACTTCTTTCTGATTTCGGTACTCAATCGCCGGtt       <  1:134811/143‑1 (MQ=255)                                                                                                                                               aGGATTCTACCAGCTTGCGGGGTGTGAATACAGCTTTTCCGCGATAAAAATTGCAGCAGGCGGTCAGTTTCTTCCCGTGATTTGCGCCATGGCAATGAAAAGCCACTTCTTTCTGATTTCGGTACTCAATCGCCGGTTAACCt  >  1:30938/1‑143 (MQ=255)                                                                                                                                               |                                                                                                                                               TTAGCCAAGGTCCAACTCCCAAATGTGTTCTATATGGACAATTCAAAGGCCGAGGAATATGCCCTTTTAGCCTTCTTTTGTCAATGGATTTGTGCAAATAAGCGCCGTTAATGTGCCGGCACTCGTTACGTAGTGATGGCGCAGGATTCTACCAGCTTGCGGGGTGTGAATACAGCTTTTCCGCGATAAAAATTGCAGCAGGCGGTCAGTTTCTTCCCGTGATTTGCGCCATGGCAATGAAAAGCCACTTCTTTCTGATTTCGGTACTCAATCGCCGGTTAACCT  >  NC_000913/21071‑21355

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.