| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 3,665,652 | G→A | 16.7% | F53F (TTC→TTT) | gadX ← | acid resistance regulon transcriptional activator; autoactivator |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 3,665,652 | 0 | G | A | 16.7% | 249.4 / 13.5 | 109 | F53F (TTC→TTT) | gadX | acid resistance regulon transcriptional activator; autoactivator |
| Reads supporting (aligned to +/- strand): ref base G (65/25); new base A (3/16); total (68/41) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 6.92e-06 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 109 total aligned reads displayed.
TGCTCATCCTCAAGAAAAACAGATAACAACGCAAAGATTAATGCTCTTTTACGTAG‑CATTTCTGCATAGCGAAGATTCTTATTCTGCGATAGTTGCGCAACTTCCTGAAAAACAGGAATATCTCTACTACAGTGATGAACGAGTAATGAAGAAACTTTTTTATGT‑GCATGAAGATTTAAT‑GCCTCCTCC‑TTGAGCATCGGGAGAAAT‑AATGAAAGCGTGTCCCTTGAC‑ACGAATACAAAATTTT‑C‑AACAC‑AC‑TTATCTACTCGAATTTGGCTTGCATCCGCAAAAACC‑AGGTCACCGCCATTAAAATAGCGATATT‑CACCATTAACCATGGTGAGAATATATTTATGTCTTGCATACGCAATTAGACAATTCCCATGTAGTGATTGCATAGTTGACTTAATA‑TTACATAAACATATTACTGTTTATTAATGTAGCACGCCGC > NC_000913/3665422‑3665863 | ttcacATCCTCAAGAAAAACAGATAACAACGGAAAGATTAATTCTCTTTTACGTAG‑CATTTCTGCATAGCGAAGATTCTTATTCTGCGATAGTTGCGCAACTTCCTGAAAAACAGGAATATCTCTACTACAGTGATGAACGAGTAATGAAGAAACTTTTTTATGT‑GCATGAAGATTTAAT‑GCCTCCTCC‑TTGAGCATCGGGAGAAAT‑AATGAAAGCGTGTCCCTTGAC‑ACGAATACaaa < 2:1245409/235‑1 (MQ=255)tGCTCATCCTCAAGAAAAACAGATAACAACGCCAAGATTAATGCTCTTTTACGTAG‑CATTTCTGCATAGCGAAGATTCTTATTCTGCGATAGTTGCGCAACTTCCTGAAAAACAGGAATATCTCTACTACAGTGATGAACGAGTAATGAAGAAACTTTTTTATGT‑GCATGAAGATTTAAT‑GCCTCCTCC‑TTTAGCATCGGGAGAAAT‑AATGAAAGCGGGTCCCTTTCC‑ACGAAAACaaa > 2:1255281/1‑239 (MQ=255)tGCTCATCCTCAAGAAAAACAGATAACAACGCAAAGATTAATGCTCTTTTACGTAG‑CATTTCTGCATAGCGAAGATTCTTATTCTGCGATATTTGCGCAACTTCCTGAAAAACAGGAATATCTCTACTACAGTGATGAACGAGTAATGAAGAAACTTTTATATGT‑GCATGAAGATTTAAT‑GCCTCATCC‑TTGAGCTTCTGGAGAAAT‑AATGAAAGAGGGTCCCTTGAC‑ACAaaaaaaaa > 2:1040359/1‑239 (MQ=255) cTCATCCTCAAGAAAAACAGATAACAACGCAAAGATTAATGCTCTTTTACGTAG‑CATTTCTGCATAGCGAAGATTCTTATTCTGCGATAGTTGCGCAACTTCCTGAAAAACAGGAATATCTCTACTACAGTGATGAACGAGTAATGAAGAAACTTTTTTATGT‑GCATGAAGATTTAAT‑GCCTCCTCC‑TTGAGCATCGGGAGAAAT‑AATGAAAGCGTGTCCCTTGAC‑ACGAATACAAAAt > 1:534787/1‑239 (MQ=255) cTCATCCTCAAGAAAAACAGATAACAACGCAAAGATTAATGCTCTTTTACGTAG‑CATTTCTGCATAGCGAAGATTCTTATTCTGCGATAGTTGCGCAACTTCCTGAAAAACAGGAATATCTCTACTACAGTGATGAACGAGTAATGAAGAAACTTTTTTATGT‑GCATGAAGATTTAAT‑GCCTCCTCC‑TTGAGCATCGGGAGAAAT‑AATGAAAGCGGGTCCCTTGAC‑ACGCATACAAAAt > 1:946846/1‑239 (MQ=255) cTCATCCTCAAGAAAAACAGATAACAACGCAAAGATTAATGCTCTTTTACGTAG‑CATTTCTGCATAGCGAAGATTCTTATTCTGCGATAGTTGCGCAACTTCCTGAAAAACAGGAATATCTCTACTACAGTGATGAACGAGTAATGAAGAAACTTTTTTATGT‑GCATGAAGATTTAAT‑GCCTCCTCC‑TTGAGCATCGGGAGAAAT‑AATGAAAGCGGGTCCCTTGAC‑ACGAATACAAAAt > 1:1256413/1‑239 (MQ=255) cTCATCCTCAAGAAAAACAGATAACAACGCAAAGATTAATGCTCTTTTACGTAG‑CATTTCTGCATAGCGAAGATTCTTATTCTGCGATAGTTGCGCAACTTCCTGAAAAACAGGAATATCTCTACTACAGTGATGAACGAGTAATGAAGAAACTTTTTTATGT‑GAATGAAGATTTAAT‑GCCTCCTCC‑TTGAGCATCGGGAGAAAT‑AATGAAAGCGTGTCCCTTGAC‑ACGAAAAAAAAAt > 2:1136680/1‑239 (MQ=255) tCATCCTCAAGAAAAACAGATAACAACGCAAAGATTAATGCTCTTTTACGTAG‑CATTTCTGCATAGCGAAGATTCTTATTCTGCGATAGTTGCGCAACTTCCTGAAAAACAGGAATATCTCTACTACAGTGATGAACGAGTAATGAAGAAACTTTTTTATGT‑GCATGAAGATTTAAT‑GCCTCCTCC‑TTGAGCATCGGGGGAAAT‑AATGAAAGCGTGTCCCTTGAC‑ACGAATACAAAAtt > 1:532828/1‑239 (MQ=255) tCATCCTCAAGAAAAACAGATAACAACGCAAAGATTAATGCTCTTTTACGTAG‑CATTTCTGCATAGCGAAGATTCTTATTCTGCGATAGTTGCGCAACTTCCTGAAAAACAGGAATATCTCTACTACAGTGATGAACGAGTAATGAAGAAACTTTTTTATGT‑GCATGAAGATTTAAT‑GCCTCCTCC‑TTGAGCATCGGGAGAAAT‑AATGAAAGAGGTTCCCTTGAC‑AAGAAAAAAAAAtt > 2:658009/1‑239 (MQ=255) aTCCTCAAGAAAAACAGATAACAACGCAAAGATTAATGCTCTTTTACGTAG‑CATTTCTGCATAGCGAAGATTCTTATTCTGCGATAGTTGCGCAACTTCCTGAAAAACAGGAATATCTCTACTACAGTGATGAACGAGTAATGAAGAAACTTTTTTATTT‑GCATGAAGTTTTAAT‑GCATCCTCC‑TTACGCATCGGGCGAAAT‑AATTAAAGATAGTCCCTTGCA‑CCAAAAACAAAAtttt > 2:529693/1‑239 (MQ=255) aTCCTCAAGAAAAACAGATAACAACGCAAAGATTAATGCTCTTTTACGTAG‑CATTTCTGCATAGCGAAGATTCTTATTCTGCGATAGTTGCGCAACTTCCTGAAAAACAGGAATATCTCTACTACAGTGATGAACGAGTAATGAAGAAACTTTTTTATGT‑TCATGAAGATTTAAT‑GCCTCCTCC‑TTGAGCAACGGGAGAAAT‑AATGAAAACGTGTCCCTTGAC‑ACGAAAACAAAAtttt > 2:947642/1‑239 (MQ=255) aTCCTCAAGAAAAACAGATAACAACGCAAAGATTAATGCTCTTTTACGTAG‑CATTTCTGCATAGCGAAGATTCTTATTCTGCGATAGTTGCGCAACTTCCTGAAAAACAGGAATATCTCTACTACAGTGATGAACGAGTAATGAAGAAACTTTTTTATGT‑GCATGAAGATTTAAT‑GCCTCCTCC‑TTGAGCATCGGGAGAAAT‑AATGAAAGCGTGTCCCTTGAC‑ACGAATACAAAAtttt < 1:1297100/239‑1 (MQ=255) ccTCAAGAAAAACAGATAACAACGCAAAGATTAATGCTCTTTTACGTAG‑CATTTCTGCATAGCGAAGATTCTTATTCTGCGATAGTTGCGCAACTTCCTGAAAAACAGGAATATCTCTACTACAGTGATGAACGAGTAATGAAGAAACTTTTTTATGT‑GCATGAAGATTTAAT‑GCCTCCTCC‑TTGAGCATCGGGAGAAAT‑AATGAAAGCGTGTCCCTTGAC‑ACGAAAAAAAAAttttaa > 2:655987/1‑237 (MQ=255) ccTCAAGAAAAACAGATAACAACGCAAAGATTAATGCTCGTTTACGTAG‑CATTGCTGCATAGCGAAGATTCTTATTCTGCGATAGTTGCGCAACTTCCTGAAAAACAGGAATATCTCTACTACAGTGATGAACGAGTAATGAAGAAACTTTTTTATGT‑GCATGAAGATTTAAT‑GCCTCCTCC‑TTGAGCATCGGGAGAAAT‑AATGAAAGCGTGTCCCTTGAC‑ACGAATACAAAATTTT‑C‑a < 1:556728/239‑1 (MQ=255) ccTCAAAGAAAGAAGATAAAAACGCAATGATTAGTCCTCTTTTACGTTGTCATTT‑TGCATAAGGAATATTCTTATTCCGCGCTAGTTGGTCAACTTCCTGAAAAACAGGAATATCGCTACTGCAGTGATGGACGAGTAATGAAGAAACTTTTTTATTT‑GCATGATGATCTAAT‑GCCTCCTCC‑TTGAGCATCGGGAGAAAT‑AATGAAAGCGTGAGCCTTGAG‑ACGAATGCAGAGTTTT‑C‑a < 2:468220/239‑1 (MQ=255) cttcaGAAAACCATATTACAACGCTAAGATTAATGCTCTTTTACGTAG‑CATTTCTGCATAGCGAAGATTCTTATTCTGCGATAGTTGCGCAATTTCCTGAAAAACAGGAATATCTCTACTACAGTGATGAACGAGTAATGAAGAAACTTTTTTATGT‑GCATGAAGATTTAAT‑GCCTCCTCC‑TTGAGCATCGGGAGAAAT‑AATGAAAGCGTGTCCCTTGAC‑ACGAATACAAAATTTT‑C‑aa < 2:75719/235‑1 (MQ=255) cTCAAGAAAAACTGATAACAACGGAAAGATTTATGCTCTTTTACGTAG‑CATTTCTGCATAGCGAAGATTCTTATTCTGCGATAGTTGCGCAACTTCCTGAAAAACAGGAATATCTCTACTACAGTTATGAACGAGTAATGAAGAAACTTTTTTATGT‑GCATGAAGATTTAAT‑GCCTCCTCC‑TTGAGCATCGGGAGAAAT‑AATGAAAGCGTGTCCCTTGAC‑ACGAATACAAAATTTT‑C‑aa < 2:534787/239‑1 (MQ=255) cTCAAGAAAAACAGATAACAACGCAAAGATTAATGCTCTTTTACGTAG‑CATTTCTGCATAGCGAAGATTCTTATTCTGCGATAGTTGCGCAACTTCCTGAAAAACAGGAATATCTCTACTACAGTGATGAACGAGTAATGAAGAAACTTTTTTATGT‑GCATGAAGATTTAAT‑GCCTCCTCC‑TTGAGCATCGGGAGAAAT‑AATGAAAGCGTGTCCCTTGAC‑ACGAATACAAAATTTT‑C‑aa < 1:529693/239‑1 (MQ=255) cTCAAGAAAAACAGATAACAACGAAAAGATTAATGCTCTTTTACGTAG‑CATTTCTGCATAGCGAAGATTCTTATTCTGCGATAGTTGCGCAACTTCCTGAAAAACAGGAATATCTCTACTACAGTGATGAACGAGTAATGAAGAAACTTTTTTATGT‑GCATGAAGATTTAAT‑GCCTCCTCC‑TTGAGCATCGGGAGAAAT‑AATGAAAGCGTGTCCCTTGAC‑ACGAATACAAAATTTT‑C‑aa < 1:655987/239‑1 (MQ=255) cAAGAAAAACAGATAACAACGCAAAGATTAATGCTCTTTTACGTAG‑CATTTCTGCATAGCGAAGATTCTTATTCTGCGATAGTTGCGCAACTTCCTGAAAAACAGGAATATCTCTACTACAGTGATGAACGAGTAATGAAGAAACTTTTTTATGT‑GCATGAAGATTTAAT‑GCCTCCTCC‑TTGAGCATCGGGAGAAAT‑AATGAAAGCGTGTCCCTTGAC‑ACGAATACAAAATTTT‑C‑Aaca < 1:546056/239‑1 (MQ=255) aaGAAAAACGAAAAACAAATAAAATATTAATGCGTTTTTACGTAG‑CATTTCTGCATAGCAAAGATTCTTATTCTGTGATAGGTGCGCAACTGCCTGAAAAACAAGAATATCTCTACTACAGTGATGAACGAGTAATGAAGAAACTTTTTTATGT‑GCATGAAGATTTAAT‑TCCTCCTCC‑TTGAGCATCGGGAGAAAT‑AATGAAAGCGTTTCCCTTGAC‑ACGAATACAAAATGTT‑c‑accac < 2:1024595/239‑1 (MQ=255) aGAAAAACAAATAACAACGCAAAATTTAATGCTCTTTTACGTAG‑CATTTCTGCATAGCGAAGATGCTTATTCTGCGATAGTTGCGCAACTTCCTGAAAAACAGGAATATCTCTACTACAGTGATGAACGAGTAATGAAGAAACTTTTTTATGT‑GCATGAAGATTTAAT‑GCCTCCTCC‑TTGAGCATCGGGAGAAAT‑AATGAAAGCGTGTCCCTTGAC‑ACGAATACAAAATTTT‑C‑Aacac‑a < 2:94251/239‑1 (MQ=255) aaaaCAGATAACAACGCAAAGATTAATGCTCTTTTACGTAG‑CATTTCTGCATAGCGAAGATTCTTATTCTGCGATAGTTGCGCAACTTCCTGAAAAACAGGAATATCTCTACTACAGTGATGAACGAGTAATGAAGAAACTTTTTTATGT‑GCATGAAGATTTAAT‑GCCTCCTCC‑TTGAGCATCGGGAGAAAT‑AATGAAAGCGTGTCCCTTGAC‑ACGAATACAAAATTTT‑C‑Aacac‑ac < 1:61344/237‑1 (MQ=255) aaCAGATAACAACGCAAAGATTAATGCTCTTTTACGTAG‑CATTTCTGCATAGCGAAGATTCTTATTCTGCGATAGTTGCGCAACTTCCTGAAAAACAGGAATATCTCTACTACAGTGATGAACGAGTAATGAAGAAACTTTTTTATGT‑GCATGAAGATTTAAT‑GCCTCCTCC‑TTGAGCATCGGGGGAAAT‑AATGAAAGCGTGTCCCTTGAC‑ACGAATACAAAATTTT‑C‑AAAAC‑AC‑TTAt > 1:40620/1‑239 (MQ=255) acccAAAGATTAATTCTCTTTTTCGTGA‑CCTTTTTGCAAAGCGAAGATTCTTATTCTGCAATAGTTGCGCAACTTCCTGAAAAACAGGAATATCTCTACTACAGTGATGAACGAGTAATGAAGAAACTTTTTTATGT‑GCATGAAGATTTAAT‑GCCTCCTCC‑TTGAGCACCGGGAGAAAT‑AATGAAAGCGTGTTCCTTGAC‑ACGAATACAAAATTTT‑C‑AACAC‑AC‑TTATCTACTCGAAtt < 2:507493/236‑1 (MQ=255) ttttACGTAG‑CATTTCTGCATAGCGAAGATTCTTATTCTGCGCTAGTTGCGCAAATTCCTGAAAAACAGGAATATCTCTACTACAGTGATGAACGAGTCATGAAGAAACTTTTTTATGT‑GCATGAAGATTTAAT‑GCCTCCTCC‑TTGAGCCTCGGGAGAAAT‑AATGAAAGCGTGTCCCTTGAC‑ACGAATACAAAATTTT‑C‑AACAC‑AC‑TTATCTACTCGAATTTGGCTTGCCTCCGCaaaa > 1:1070255/1‑239 (MQ=255) ttttACGTAG‑CATTTCTGCATAGCGAAGATTCTTATTCTGCGATAGTTGCGCAACTTCCTGAAAAACAGGAATATCTCTACTACAGTGATGAACGAGTAATGAAGAAACTTTTTTATGT‑GCATGAAGATTTAAT‑GCCTCCTCC‑TTGAGCATCGGGAGAAAT‑AATGAAAGCGTGTCCCTTGAC‑ACGAATACAAAATTTT‑C‑AACAC‑AC‑TTATCTACTCGAATTTGGCTTGCATCCGCaaaa > 1:974613/1‑239 (MQ=255) ttttACGTAG‑CATTTCTGCATAGCGAAGATTCTTATTCTGCGATAGTTGCGCAACTTCCTGAAAAACAGGAATATCTCTACTACAGTGATGAACGAGTAATGAAGAAACTTTTTTATGT‑GCATGAAGATTTAAT‑GCCTCCTCC‑TTGAGCATCGGGAGAAAT‑AATGAAAGCGTGTCCCTTGAC‑ACGAATACAAAATTTT‑C‑AACAC‑AC‑TTATCTACTCGAATTTGGCTTGCATCCGCaaaa > 1:1174453/1‑239 (MQ=255) ttttACGTAG‑CATTTCTGCATAGCGAAGATTCTTATTCTGCGATAGTTGCGCAACTTCCTGAAAAACAGGAATATCTCTACTACAGTGATGAACGAGTAATGAAGAAACTTTTTTATGT‑GCATGAAGATTTAAT‑GCCTCCTCC‑TTGAGCATCGGGAGAAAT‑AATGAAAGCGTGTCCCTTGAC‑ACGAATACAAAATTTT‑C‑AACAC‑AC‑TTATCTACTCGAATTTGGCTTGCATCCGCaaaa > 1:94527/1‑239 (MQ=255) ttttACGTAG‑CATTTCTGCATAGCGAAGATTCTTATTCTGCGATAGTTGCGCAACTTCCTGAAAAACAGGAATATCTCTACTACAGTGATGAACGAGTAATGAAGAAACTTTTTTATGT‑GCATGAAGATTTAAT‑GCCTCCTCC‑TTGAGCATCGGGAGAAAT‑AATGAAAGCGTGTCCCTTGAC‑ACGAATACAAAATTTT‑C‑AACAC‑AC‑TTATCTACTCGAATTTGGCTTGACTCCCCaaaa > 2:18165/1‑239 (MQ=255) ttttACGAAG‑CATATCTGCATAGCGAAGGTTCTTATTCTGCGATCGTTGCGCAACTTCCTGAAAAACAGGAATATCTCTACTAAAGTGATGAACGTGTAATGAAGCAAGTTTTTTATGT‑GCATGATGATTTATT‑GCCTCCTCC‑TTGAGCATCGGTAGAAAT‑AATGAAACCGCGTCCTTTGAT‑ATGTATCGAAAATTTC‑C‑AAAAC‑AC‑TTACCAACCCCAATTTTGCTTCAATACGCaaaa > 2:239877/1‑239 (MQ=255) tACGTAG‑CATTTCTGCATAGCGAAGATTCTTATTCTGCGATAGTTGCGCAACTTCCTGAAAAACAGGAATATCTCTACTACAGTGATGAACGAGTAATGAAGAAACTTTTTTATGT‑GCATGAAGATTTAAT‑GCCTCCTCC‑TTGAGCATCGGGAGAAAT‑AATGAAAGCGTGTCCCTTGAC‑ACGAATACAAAATTTT‑C‑AACAC‑AC‑TTATCTACTCGAATTTGGCTTGCATCCGCAAAAAcc > 1:134976/1‑239 (MQ=255) cATTTCTGCATAGCGAAGATTCTTATTCTGCGATAGTTGCGCAACTTCCTGAAAAACAGGAATATCTCTACTACAGTGATGAACGAGTAATGAAGAAACTTTTTTATGT‑GCATGAAGATTTAAT‑GCCTCCTCC‑TTGAGCATCGGGAGAAAT‑AATGAAAGCGTGTCCCTTGAC‑ACGCATACAAAATTTT‑C‑AACAC‑AC‑TTATCTACTCGAATTTGGCTTGCATCCGCAAAAACC‑AGGTCa > 1:834577/1‑238 (MQ=255) cATTTCTGCATAGCGAAGATTCTTATTCTGCGATAGTTGCGCAACTTCCTGAAAAACAGGAATATCTCTACTACAGCGATGAACGAGGAATGAAGAAACTTTTTTATGT‑GAATGAAGATTTAAT‑GCCTCCTCC‑TTGAGCATCGGGGGCAAT‑AATGACAGCGAGTCCCTTCAA‑ACGTATATAAATTTTT‑C‑AAAAC‑CA‑TTCATAACTCGATTTTGCCTTGCATCCCCAAAAACA‑Agtaac > 2:722523/1‑234 (MQ=255) cTGCATAGCGAAGATTCTTATTCTGCGATAGTTGCGCAACTTCCTGAAAAACAGGAATATCTCTACTACAGTGATGAACGAGTCATGAAGAAACTTTTTTATGT‑GCATGAAGATTTAAT‑GCCTCCTCC‑TTGAGCTTCGGGAGAAAT‑ACTGAAAGCGTGTCCCTTGCC‑ACGAATACAAAATTTT‑C‑ACCAC‑AC‑TTATCTCATCGAATTTGGCTTGCATCCGCAAAAACA‑AGGACACccccc > 2:51181/1‑238 (MQ=255) tAGCGAAGATTCTTATTCTGCGATAGTTGCGCAACTTCCTGAAAAACAGGAATATCTCTACTACAGTGATGAACGAGTAATGAAGAAACTTTTTTATGT‑GCATGAAGATTTAAT‑GCCTCCTCC‑TTGAGCATCGGGAGAAAT‑AATGAAAGCGTGTCCCTTGAC‑ACGAATACAAAATTTT‑C‑Aacac‑a > 1:328572/1‑185 (MQ=255) tAGCGAAGATTCTTATTCTGCGATAGTTGCGCAACTTCCTGAAAAACAGGAATATCTCTACTACAGTGATGAACGAGTAATGAAGAAACTTTTTTATGT‑GCATGAAGATTTAAT‑GCCTCCTCC‑TTGAGCATCGGGAGAAAT‑AATGAAAGCGTGTCCCTTGAC‑ACGAATACAAAATTTT‑C‑Aacac‑a < 2:328572/185‑1 (MQ=255) cGAAGATTCTTATTCTGCGATAGTTGCGCAACTTCCTGAAAAACAGGAATATCTCTACTACAGTGATGAACGAGTAATGAAGAAACTTTTTTATGT‑GCATGAAGATTTAAT‑GCCTCCTCC‑TTGAGCATCGGGAGAAAT‑AATGAAAGCGTGTCCCTTGAC‑ACGAATACAAAATTTT‑C‑AACAC‑AC‑TTATCTACTCGAATTTGGCTTGCATCCGCAAAACCC‑AGGCCACCGCCATTAAAATa > 1:1252337/1‑239 (MQ=255) cTTATTTGGCAATTGTTGCCAAACTTCCGAAAAAAAGGGAATATCTCTCAAAAAGTAATGAAGGAGAAATGAAG‑AACTTTTTTTTGTGGAATGAAGTTTTAAT‑CCCTCCTCC‑TTGGGAATGGGGAAAAAT‑AATGAAAGCTTGTCCCTTGAC‑AAAAATACAAAATTTA‑C‑ACCAC‑AC‑TTATCTACTAGATTTTGGCTTGCACCCGAAAAACCC‑AGGTCACCGCCATTAAAATAGCGATAtt < 1:357177/239‑1 (MQ=255) tATTCTGCGATAGTTGCGCAACTTCCTGAAAAACAGGAATATCTCTACTACAGTGATGAACGAGTAATGAGGAAACTTTTTTATGT‑GCATGAAGATTTAAT‑GCCTCCTCC‑TTGAGCATCGGGAGAAAT‑AATGAAAGCGAGTCCCTTGAC‑ACGAATACAAAATTTT‑C‑AACAC‑AC‑TTATCTACTCGAATTTGGCTTGCATCCGCAAAAACC‑CGGCCAACGCCATTAAAATAGCGaaaaaca > 2:498476/1‑233 (MQ=255) tGCGATAGTTGCGCAACTTCCTGAAAAACAGGAATATCTCTCCTACAGTGATGAACGAGTAATGAAGAAACTTTTTTATGT‑GCATGAAGATTTAAT‑GCCTCCTCC‑TTGAGCATCGGGAGAAAT‑AATGAAAGCGTGTCCCTTGAC‑ACGAATACAAAATTTT‑C‑AACAC‑AC‑TTATCTACTCGAATTTGGCTTGAATCCGCACAAACC‑AGGTCACCGCCATTAAAATAGCGATCtttcccttt > 1:182347/1‑232 (MQ=255) tGCGATAGTTGCGCAACTTCCTGAAAAACAGGAATATCTCTACTACAGTGATGAACGAGTAATGAAGAAACTTTTTTATGT‑GCATGAAGATTTAAT‑GCCTCCTCC‑TTGAGCATCGGGAGAAAT‑AATGAAAGCGTGTCCCTTGAC‑ACGATTACAAAATTTT‑C‑AACAC‑AC‑TTATCTACTCGAATTTGGCTTGCATCGGCAAAAACC‑AGGTCACCCCAATTAAAAAAGGGAAAttaaacctt > 2:543555/1‑232 (MQ=255) tGCGATAGTTGCGCAACTTCCTGAAAAACAGGAATATCTCTACTACAGTGATGAACGAGTAATGAAGAAACTTTTTTATGT‑GCATGAAGATTTAAT‑GCCTCCTCC‑TTGAGCATCGGGAGAAAT‑AATGAAAGCGTGTCCCTTGAC‑ACGAATACACAATTTT‑C‑AACAC‑AC‑TTATCTACTCGAATTTGGCTTGCATCCGCAACAACC‑AGGTCACCGCCATTAAAATAGCGATATT‑CACCAtt > 1:1018220/1‑239 (MQ=255) tGCGATAGTTGCGCAACTTCCTGAAAAACAGGAATATCTCTACTACAGTGATGAACGAGTAATGAAGAAACTTTTTTATGT‑GCATGAAGATTTAAT‑GCCTCCACC‑TTGATCATCGGGAGAAAT‑AATGAAAGCTTGTCCCTTGAC‑CCGATTa > 2:726584/1‑151 (MQ=255) cGATAGTTGCGCAACTTCCTGAAAAACAGGAATATCTCTACTCCAGTGATGAACGAGTAATGAAGAAACTTTTTTATGT‑GCATGAAGATTTAAT‑GCCTCCTCC‑TTGAGCATCGGGAGAAAT‑AATGAAAGCGTGTCCCTTGAC‑ACGAATACAAAATTTT‑C‑ac > 2:879100/1‑160 (MQ=255) cGATAGTTGCGCAACTTCCTGAAAAACAGGAATATCTCTACTACAGTGATGAACGAGTAATGAAGAAACTTTTTTATGT‑GCATGAAGATTTAAT‑GCCTCCTCC‑TTGAGCATCGGGAGAAAT‑AATGAAAGCGTGTCCCTTGAC‑ACGAATACAAAATTTT‑C‑aa < 1:879100/161‑1 (MQ=255) cGATAGTTGCGCAACTTCCTGAAAAACAGGAATATCTCTACTACAGTGATGAACGAGTAATGAAGAAACTTTTTTATGT‑GCATGAAGATTTAAT‑GCCTCCTCC‑TTGAGCATCGGGAGAAAT‑AATGAAAGCGTGTCCCTTGAC‑ACGAATACAAAATTTT‑C‑AACAC‑AC‑TTATCTACTCGAATTTGGCTTGCATCCGCAAAAACC‑AGGTCACCGCCATTAAAATAGCGATATT‑CACCATTa > 1:733632/1‑238 (MQ=255) cGATAGTTGCGCAACTTCCTGAAAAACAGGAATATCTCTACTACAGTGATGAACGAGTAATGAAGAAACTTTTTTATGT‑GCATGAAGATTTAAT‑GCCTCCTCC‑TTGAGCATCGGGAGAAAT‑AATGAAAGCGTGTCCCTTGAC‑ACGAATACAAAATTTT‑C‑AACAC‑AC‑TTATCTACTCGAATTTGGCTTGCATCCGCAAAAACC‑AGGTCACCGCCATTAAAATAGCGAATTT‑CACATTTaa > 1:464688/1‑239 (MQ=255) ttGCGCAACTTCCTGAAAAACAGGAATATCTCTACTACAGTGATGAACGAGTAATGAAGAAACTTTTTTATGT‑GCATGAAGATTTAAT‑GCCTCCTCC‑TTGAGCATCGGGAGAAAT‑AATGAAAGCGTGTCCCTTGAC‑ACGAATACAAAATTTT‑C‑AACAC‑AC‑TTATCTACTCGAATTTGGCTTGCATCCGCAAAAACC‑AGGTCACCGCCATTAAAATAGCGATATT‑CACCATTAAc > 1:365936/1‑234 (MQ=255) tGCGCACTTTCCTGAAAAACGGTAATTTCTCTACAAAAGTGATGAACGAGTAATGAATAATCTTTTTTATGG‑TAATGAAGATTTAAT‑CCCTCCTCC‑TTGAGCATCGGGAAAAAT‑AATGAAAGCTTTTCCCTTGAA‑AAAAATAAAAAATTTT‑C‑AACAC‑TT‑TTATCTACTCAATTTTGGTTTGCACCCGAAAAACCC‑AGGTCACCGCCATTAAAATAGCGATATT‑CACCATTAACCATGGt < 1:247198/239‑1 (MQ=255) gcgcAACTTCCTGAAAAACAGGAATATCTCTACTACAGTGATGAACGAGTAATGAAGAAACTTTTTTATGT‑GCATGAAGATTTAAT‑GCCTCCTCC‑TTGAGCATCGGGAGAAAT‑AATGAAAGCGTGTCCCTTGAC‑ACGAATACAAAATTTT‑C‑AACAC‑AC‑TTATCTACTCGAATTTGGCTTGCATCCGCAAAAACC‑AGGCCACCGCCATTAAAATAGCGAAATT‑AACCATAAACCAAggga > 2:1010255/1‑237 (MQ=255) gcgcAACTTCCTGAAAAACAGGAATATCTCTACTACAGTGATGAAAGAGTAATGAAGAAACTTTTTTATGT‑GCATGAAGATTTAAT‑GCCTCCTCC‑TTGAGCATCGGGAGAAAT‑AATGAAAGCGTGTCCCTTGAC‑ACGAATACAAAATTTT‑C‑AACAC‑AC‑TTATCTACTCGAATTTGGCTTGCATCCGCAAAAACC‑AGGTCACCGCCATTAAAAAAGCACTATT‑AACCATTAACCATgggg > 1:641902/1‑237 (MQ=255) cgcaattgtatGAAAAACGGGAATTTTCTTACTAAGTTTATGAACGAGTAATAAAGAAACTTTTTAATGG‑CCAAAAAATTTTAAG‑CCCTCCACC‑TGGAGCAGCGGGAAAAAT‑AATGAAGGGGTGCCCCCAAAC‑ACAAATAAAAAATTTA‑A‑AACAC‑AT‑TTATCTACCCAATTTTGGCTTGAATCCGAAAAAACC‑AGGTCACCGCCATTAAAATAGCGATATT‑CACCATTAACCATGGTga < 1:943548/229‑1 (MQ=255) gcAACTTCCTGAAAAACAGGAATATCTCTACTACAGTGATGAACGAGTAATGAAGAAACTTTTTTATGT‑GCATGAAGATTTAAT‑GCCTCCTCC‑TTGAGCATCGGGAGAAAT‑AATGAAAGCGTGTCCCTTGCA‑CCGAATACAAAATTTT‑C‑AACAC‑AA‑TTCACTACTCGAATTTGGCTTGCATCCGCAAAAACC‑AGGTAACCCCCATTAAAATAGCGATATT‑CACCATTAACCAGGGGgaa > 2:1254492/1‑238 (MQ=255) gcAACTTCCTGAAAAACAGGAATATCTCTACTACAGTGATGAACGAGTAATGAAGAAACTTTTTTATGT‑GCATGAAGATTTAAT‑GCCTCCTCC‑TTGAGCATCGGGAGAAAT‑AATGAAAGCGTGTCCCTTGAC‑ACGAATACAAAATTTT‑C‑AACAC‑AC‑TTATCTACTCGAATTTGGCTTGCATCCGCAAAAACC‑AGGTCACCGCCATTAAAATAGCGATATT‑CACCATTAACCATGGTgag > 1:987784/1‑239 (MQ=255) acatttctaaaaaaaGAGATATATCTCTCATAAAGGAATG‑ACGAGAAAAGAAAAAACTTTTTTATGT‑GGAATAAAATTTTAT‑GCCCCCCCCTTTGAGCATGGGAAAAAAA‑AAGAAAAGCGTGTCCCTTGCC‑A‑GAAAAAAAAATTTT‑C‑AACCC‑CCTTTATCTACCCAATTTGGGCTTGCATCCGAAAAACCC‑AGGTCACCGCCATTAAAATAGCGATATT‑CACCATTAACCATGGTgaga < 1:543555/229‑1 (MQ=255) aatttccaaaaaaaCAAGAATACCTCTACTCAGGGGAAGAAAGAATAAGAAAAAAATTTTTTTATGT‑AAAATAAGATTTAAT‑CCCCCCTCC‑TTGACCATGGGAAAAAAT‑AATAAAGGCGTGTCCCTTGAC‑ACGAATAAAAATTTTA‑C‑ACCCC‑AC‑TTATCTACTCGATTTTGGTTTGCACCCACAAAACCC‑GGTTCACCGCCATTAAAATAGCGATATT‑CACCATTAACCATGGTGAGaa < 1:358150/230‑1 (MQ=255) tttccaaaaaaaCAGGAATATCTCTACTGAAGTAAGAAACGAGTAATGAAAAAATTTTTTTATGG‑GAAGAAAGTTTTAAT‑GCCTCCTCC‑TTGGGCAGCGGGAGAAAA‑AATAAAGGGGTGTCCCTTGAC‑CCAAATA‑AAAATTTT‑CAAACCC‑TC‑TTATCTACCCAAATTTGGCTTGCACCCGAAAAAACC‑AGGCCACCGCCATTAAAATAGCGATATT‑CACCATTAACCATGGTGAGAata < 1:1136680/232‑1 (MQ=255) cTGAAAAACAGGAATATCTCTACTACAGTGATGAACGAGTAATGAAGAAACTTTTTTATGT‑GCATGAAGATTTAAT‑GCCTCCTCC‑TTGAGCATCGGGAGAAAT‑AATGAAAGCGTGTCCCTTGAC‑ACGAATACAAAATTTT‑C‑AACAC‑AC‑TTATCTACTCGAATTTGGCTTGCATCCGCAAAAACC‑AGGTCACCGCCATTAAAATAGCGATATT‑CACCATTAACCATGGTGAGAATATAtt > 1:44077/1‑239 (MQ=255) aaaCAGGAATCTCTCTACTACAGTTAAGAAAGAAAAATAAAAAAATTTTTTTAGGT‑GCATGAAGATTAAAT‑CCCCCCCCC‑TTGAACATGGGGAAAAAT‑AATGAAAGCGTTCCCTTTGAC‑ACAAATAAAAAATTTC‑C‑AACAC‑AC‑TTATCTACTCAATTTTGGCTTGCACCCGCAAAACCC‑GGGTCACCGCCATTAAAATAGCGATATT‑CACCATTAACCATGGTGAGAATATATTTATGt < 1:1010255/239‑1 (MQ=255) aGGAATATCTCTACTACAGTGATGAACGAGTAATGAAGAAACTTTTTTATGT‑GCATGAAGATTTAAT‑GCCTCCTCC‑TTGAGCATCGGGAGAAAT‑AATGAAAGCGTGTCCCTTGAC‑ACGAATACAAAATTTT‑C‑AACAC‑AC‑TTATCTACTCGAATTTGGCTTGCATCCGCAAAAACC‑AGGTCACCGCCATTAAAATAGCGATATT‑CACCATTAACCATGGTGAGAATATATTTATGTCtt > 1:12461/1‑238 (MQ=255) gAATATCTCTACTACAGTGATGAACGAGTAATGAAGAAACTTTTTTATGT‑GCATGAAGATTTAAT‑GCCTCCTCC‑TTGAGCATCGGGAGAAAT‑AATGAAAGCGTGTCCCTTGAC‑ACGAATACAAAATTTT‑C‑AACAC‑AC‑TTATCTACTCGAATTTGGCTTGCATCCGCAAAAACC‑AGGTCACCGCCATTAAAATAGCGATATT‑CACCATTAACCATGGTGAGAATATATTTATGTCTTGCa > 1:236023/1‑239 (MQ=255) atatCTCTACTACAGTGATGAACGAGTAATGAAGAAACTTTTTTATGT‑GCATGAAGATTTAAT‑GCCTCCTCC‑TTGAGCATCGGGAGAAAT‑AATGAAAGCGTGTCCCTTGAC‑ACGAATACAAAATTTT‑C‑AACAC‑AC‑TTATCTACTCGAATTTGGCTTGCATCCGCAAAAACC‑AGGTCACCGCCATTAAAATAGCGATATT‑AACCATTAACCATGTTGAGAATATATTTATGCCTTGCAt > 1:170549/1‑238 (MQ=255) atatCTCTACTACAGTGATGAACGAGTAATGAAGAAACTTTTTTATGT‑GCATGAAGATTTAAT‑GCCTCCTCC‑TTGAGCATCGGGAGAAAT‑AATGAAAGCGTGTCCCTTGAC‑ACGAATAAAAAATTTT‑A‑AACAC‑AC‑TTATCTACTCGAATTTGGCTTGAATCCGCAAAAACC‑AGGTCACCGCCATTAAAATAGCGATATT‑CACCATTACACATGGTGAAAAAACATTTATGTCttcaaa > 2:1104902/1‑234 (MQ=255) tctACTACAGGGATGAACGAGTAATAAAGAATCTTTTTAATGT‑GAAAGAAATTTTAAC‑CCCTCCCCC‑TTGAGCATCGGAAAAAAT‑AATAAAAGCGTTCCCCTTGAC‑ACAAATACAAATTTTC‑C‑AACAC‑AT‑TTATCTACTCAATTTGGGCTTGCACCCAAAAAAACC‑AGGTCCCCGCCATTAAAATAGCGATATT‑CACCATTAACCATGGTGAGaa < 1:665917/215‑1 (MQ=255) cAGTGATGAACGAGTAATGAAGAAACTTTTTTATGT‑GCATGAAGATTTAAT‑GCCTCCTCC‑TTGAGCATCGGGAGAAAT‑AATGAAAGCGTGTCCCTTGAC‑ACGAATACAAAATTTT‑C‑aa > 1:385069/1‑118 (MQ=255) cAGTGATGAACGAGTAATGAAGAAACTTTTTTATGT‑GCATGAAGATTTAAT‑GCATCCTCC‑TTGAGCATCGGGAGAAAT‑AATGAAAGCGTGTCCCTTGAC‑ACGAATACAAAATTTT‑C‑AACAC‑AC‑TTATCTACTCGAATTTGTCTTGCATCCGCAAAAACC‑AGGTCCCCGCCATTACAATCGCGATATT‑CACCATTAACCATGGTGAGAATATATATATGTCTGGCAAAGGCAAATAGACa > 2:650116/1‑239 (MQ=255) tgatgaACGAGTAATGAAGAAACTTTTTTATGT‑GCATGAAGATTTAAT‑GCCTCCTCC‑TTGAGCATCGGGAGAAAT‑AATGAAAGCGTGTCCCTTGAC‑ACGAATACaaa < 2:889179/107‑1 (MQ=255) tgatgaACGAGTAATGAAGAAACTTTTTTATGT‑GCATGAAGATTTAAT‑GCCTCCTCC‑TTGAGCATCGGGAGAAAT‑AATGAAAGCGTGTCCCTTGAC‑ACGAATACaaa > 1:889179/1‑107 (MQ=255) tgatgaACGAGTAATGAAGAAACTTTTTTATGT‑GCATGAAGATTTAAT‑GCCTCCTCC‑TTGAGCATCGGGAGAAAT‑AATGAAAGCGTGTCCCTTGAC‑ACGAATACAAAATTTT‑C‑a > 1:519621/1‑114 (MQ=255) tgatgaACGAGTAATGAAGAAACTTTTTTATGT‑GCATGAAGATTTAAT‑GCCTCCTCC‑TTGAGCATCGGGAGAAAT‑AATGAAAGCGTGTCCCTTGAC‑ACGAATACAAAATTTT‑C‑a < 2:519621/114‑1 (MQ=255) atgaACGAGTAATGAAGAAACTTTTTTATGT‑GCATGAAGATTTAAT‑GCCTCCTCC‑TTGAGCATCGGGAGAAAT‑AATGAAAGCGTGTCCCTTGAC‑ACGAATACAAAATTTT‑C‑aa > 2:886748/1‑113 (MQ=255) atgaACGAGTAATGAAGAAACTTTTTTATGT‑GCATGAAGATTTAAT‑GCCTCCTCC‑TTGAGCATCGGGAGAAAT‑AATGAAAGCGTGTCCCTTGAC‑ACGAATACAAAATTTT‑C‑aa < 1:886748/113‑1 (MQ=255) atgaACGAGTAATGAAGAAACTTTTTTATGT‑GCATGAAGATTTAAT‑GCCTCCTCC‑TTGAGCATCGGGAGAAAT‑AATGAAAGCGTGTCCCTTGAC‑ACGAATACAAAATTTT‑C‑AACAC‑AC‑TTATCTACTCGAATTTGGCTTGCATCCGCAAAAACC‑AGGTCACCTCCATTAAAATAGCGCTATT‑CACCATGAACAATTGTGAGAATAAATTTATGTCTTGCAATCGCAATTAGTCAATTc > 1:706516/1‑238 (MQ=255) atgaACGAGTAATGAAGAAACTTTTTTATGT‑GCATGAAGATTTAAT‑GCCTCCTCC‑TTGAGCATCGGGAGAAAT‑AATGAAAGCGTGTCCCTTGAC‑ACGAATACAAAATTTT‑C‑AACAC‑AC‑TTATCTACTCGAATTTGGCTTGCATCCGCAAAAACC‑AGGTCACCGCCATTAAAATAGCGATATT‑CACCATTAACCATGGTGAGAATATATTTATg > 1:410580/1‑213 (MQ=255) atgaACGAGTAATGAAGAAACTTTTTTATGT‑GCATGAAGATTTAAT‑GCCTCCTCC‑TTGAGCATCGGGAGAAAT‑AATGAAAGCGTGTCCCTTGAC‑ACGAATACAAAATTTT‑C‑AACAC‑AC‑TTATCTACTCGAATTTGGCTTGCATCCGCAAAAACC‑AGGTCACCGCCATTAAAATAGCGATATT‑CACCATTAACCATGGTGAGAATATATTTATGTCTTGCATACGCAATTAGAcctgtct > 1:859175/1‑233 (MQ=255) atgaACGAGTAATGAAGAAACTTTTTTATGT‑GCATGAAGATTTAAT‑GCCTCCTCC‑TTGAGCATCGGGAGAAAT‑AATGAAAGCGTGTCCCTTGAC‑ACGAATACAAAATTTT‑C‑AACAC‑AC‑TTATCTACTCGAATTTGGCTTGCATCCGCAAAAACC‑AGGTCACCGCCATTAAAATAGCGATATT‑CACCATTAACCATGGTGAGAATATATTTATGTCTTGCATACGCAATTAGACAATTc > 1:1285586/1‑238 (MQ=255) atgaACGAGTAATGAAGAAACTTTTTTATGT‑GCATGAAGATTTAAT‑GCCTCCTCC‑TTGAGCATCGGGAGAAAT‑AATGAAAGCGTGTCCCTTGAC‑ACGAATACAAAATTTT‑C‑AACAC‑AC‑TTATCTACTCGAATTTGGCTTGCATCCGCAAAAACC‑AGGTCACCGCCATTAAAATAGCGATATT‑CACCATTAACCATGGTGAGAATATATTTATGTCTTGCATACGCAATTAGACAATTc > 1:1110994/1‑238 (MQ=255) atgaACGAGTAATGAAGAAACTTTTTTATGT‑GCATGAAGATTTAAT‑GCCTCCTCC‑TTGAGCATCGGGAGAAAT‑AATGAAAGCGTGTCCCTTGAC‑ACGAATACAAAATTTT‑C‑AACAC‑AC‑TTATCTACTCGAATTTGGCTTGCATCCGCAAAAACC‑AGGTCACCGCCATTAAAATAGCGATATT‑CACCATTAACCATGGTGAGAATATATTTATGTCTTGCATACGCAATTAGACAATTc > 1:608394/1‑238 (MQ=255) atgaACGAGAAATGAAGAAACTTTTTTATGT‑GCATGAAGATTTAAT‑GCCTCCTCC‑TTGAGCATCGGGAGAAAT‑AATGAAAGCGTGTCCCTTGAC‑ACAAATACAAAATTTT‑C‑AACAC‑AC‑TTATCTACTCAAATTTGGCTTGCATCCTCAAAAACC‑AGGTCACCGCCATTAAAAAAGCGATATT‑CACCATTAACCATGCTGGTAATATATTTATGTCTTTCATACGAAATTAGACAATTc > 1:754674/1‑238 (MQ=255) aaCGAGTAATGAAGAAACTTTTTTATGT‑GCATGAAGATTTAAT‑GCCTCCTCC‑TTGAGCATCGGGAGAAAT‑AATGAAAGCGTGTCCCTTGAC‑ACGAATACAAAATTTT‑C‑AACAC‑AC‑TTATCTACTCGAATTTGGCTTGCATCCGCAAAAACC‑AGGTCACCGCCATTAAAAAAGCGCTATT‑CACCATTAACCATGGTGAGAATCTATTTATATCTTTCATACGCAATTAAACAATTCCCaa > 2:1280265/1‑238 (MQ=255) cGAGTAATGAAGAAACTTTTTTATGT‑GCATGAAGATTTAAT‑GCCTCCTCC‑TTGAGCATCGGGAGAAAT‑AATGAAAGCGTGTCCCTTGAC‑ACGAATACAAAATTTT‑C‑AACAC‑AC‑TTATCTACTCGAATTTGGCTTGCATCCGCAAAACCC‑AGGTCACGGCCCTTAAAATAGCGCTATT‑CCCCATTAACACTGGTGAGAAAATATTCATTTCTTGCTAAAGAAATTAGACAATTCCAATga > 2:913389/1‑238 (MQ=255) gTAATGAAGAAACTTTTTTATGT‑GCATGAAGATTTAAT‑GCCTCCTCC‑TTGAGCATCGGGAGAAAT‑AATGAAAGCGTGTCCCTTGAC‑ACGAATACAAAATTTT‑C‑AACAC‑AC‑TTATCTACTCGAATTTGGCTTGCATCCGCAAAAACC‑AGGTCACCGCCATTAAAATAGCGATATT‑CACCATTAACCATGGTGAGAATATATTTATGTCTTGCATACGCAATTAGACAATTCCCATGTAGt > 1:1149030/1‑239 (MQ=255) taaaaatttttttttATTT‑ACATGATTATTTACC‑CCCCCCCTC‑TTCAGCATGGGGAAAAAT‑AAT‑AAGATGTTCTCCATGACTACAAAAAAAAATTTTA‑C‑AACAC‑AC‑TTATATACAGTATTTTTGTTTCCATCAAAAAAACCC‑AGGTCACCGCCATTAAAATAGCGATATT‑CACCATTAACCATGGTGAGAATATATTTATGTCTTGCATACGCAATTAGACAATTCCCATGTAGTGAtt < 2:1285586/230‑1 (MQ=255) ttttttttATTG‑GCATGAATTTTTAAC‑CCCTCCTCT‑TGGAGCATGGGAAAAAAT‑AAGGAAAGCGTGTCCCTTGAC‑ACGAATACAAAATTCT‑C‑AACAC‑TT‑TTATCTCCTCGAATTTGGCTTGCATCCACAAAAACC‑AGGTCACCGCCATTAAAATAGCGATATT‑CACCATTAACCATGGTGAGAATATATTTATGTCTTGCATACGCAATTAGACAATTCCCATGTAGTGATTGCATAGt < 1:699988/237‑1 (MQ=255) ttttttttATGT‑GATTGAAGTTTCACT‑CCCTCCCCC‑TTGAACATAGAGAAAAAA‑AAGAAACGTTTGTCCTGTGAT‑CAAAATAAAAAAATTA‑A‑AACAC‑AC‑TTATCATGTAGATTTTGTATGTGACCCGCAAAACCC‑AGTGCACCGCCATTAAAATAGCGATATT‑CACCATTAACCATGGTGAGAATATATTTATGTCTTGCATACGCAATTAGACAATTCCCATGTAGTGATTGCATAGt < 2:134976/237‑1 (MQ=255) aCTTTTTTATGT‑GCATGAAGATTTAAT‑GCCTCCTCC‑TTGAGCATCGGGAGAAAT‑AATGAAAGCGTGTCCCTTGAC‑ACGAATACAAAATTTT‑C‑AACAC‑AC‑TTATCTACTCGAATTTGGCTTGCATCCGCAAAAACC‑AGGTCACCGCCATTAAAATAGCGATATT‑CACCATTAACCATGGTGAGCATATATTTATGTCTTGAATAGGCAATTATACAATTCCAATGTACGAATTCCATAGt > 1:1014665/1‑239 (MQ=255) tttattgacATAAATATTTAAT‑GTCCCCTCC‑TTGAGCAGCGGGAAAAAT‑AAGGAACGCTTCCCCTTTGAC‑ACAAATAAAAATTTTA‑C‑AACAA‑TC‑TTATTTACACAAATTTGCCTTCACCCCGCAAACACA‑AGTTCACCGCCATTAAAATAGCGATATT‑CACCATTAACCATGGTGAGAATATATTTATGTCTTGCATACGCAATTAGACAATTCCCATGTAGTGATTGCATAGTTGACt < 1:401604/231‑1 (MQ=255) gt‑gCATGCAGATTTAAT‑GCCTCCTCC‑TTGAGCATCGGGAGAAAT‑AATGAAAGCGTGTCGCTTGAC‑AAGAATACAAACTTTT‑T‑AACAC‑AC‑TTATCTACTCGAGTTTGGCTTGCATCCGCATAAAAC‑TGGTAACCCCCATTAACATAGCGCCATTACACC‑TTAACCATGGTGGCGATATATTCATGTCATCCATACGCAATACAACCATTGCAAAGTACTGTTTGCATAGTTGACTaaaaa > 2:271075/1‑237 (MQ=255) ggcaggaaaTTTAATCGCCTCTCCT‑TTGACCAT‑GGGAAAAATAAATAAAGGCGTGTCCTTTGAC‑ACAAATA‑AAAATTTT‑C‑AAAACTAT‑TTATC‑ACCTGAATTTTGGTTGCCACCCAAAAAACCAAGGTCACCGCCATTAAAATAGCGATATT‑CACCATTAACCATGGTGAGAATATATTTATGTCTTGCATACGCAATTAGACAATTCCCATGTAGTGATTGCATAGTTGACTTAata‑t < 1:947642/231‑1 (MQ=255) taaattttAAT‑GCCCCCTCC‑TGGAGAACGGGAAAAAAA‑AATGAAAGGGGGCCCCTTGAC‑AAAAATAAAAAATTTA‑C‑AACAC‑TC‑TTATCTACCCGAATTTGGCTTGCACCCAAAAAACCC‑AGGTCACCGCCATTAAAATAGCGATATT‑CACCATTAACCATGGTGAGAATATATTTATGTCTTGCATACGCAATTAGACAATTCCCATGTAGTGATTGCATAGTTGACTTAATA‑TTACAt < 1:138100/234‑1 (MQ=255) gaatttttAAT‑CCCCCCTAC‑TTGAACAGGGGGAAAAAT‑AAAGAAGGCGTCTCCCTT‑AC‑AAAAAAAAAAAATTTTAC‑AACCC‑TT‑TTATCTCCTAAAATTTGGCTTGCACCCAAAAAACCC‑AGGTCACCGCCATTAAAATAGCGATATT‑CACCATTAACCATGGTGAGAATATATTTATGTCTTGCATACGCAATTAGACAATTCCCATGTAGTGATTGCATAGTTGACTTAATA‑TTACAt < 1:1226981/234‑1 (MQ=255) agagTTAAC‑GCCTCGTCC‑TGGAGCATGGGGAAAAAT‑AAGAAAAGTGGCTCCTTAGAC‑A‑GAAAACAAAATTTTCC‑AACAT‑AT‑TTATCTACTAGATTTTGGCTTCCTCCCAAAAAAACC‑AGGTAGCCGCCATTAAAATAGCGATATT‑CACCATTAACCATGGTGAGAATATATTTATGTCTTGCATACGCAATTAGACAATTCCCATGTAGTGATTGCATAGTTGACTTAATA‑TTACATaa < 1:239877/239‑1 (MQ=255) tttAAG‑CCCCCCGCC‑GTGAACAACGGGAAAAAA‑AAGAAAGGCTTCTCCCTTGAC‑ACAAAAAAAAATTTTC‑C‑AACAC‑AC‑TTATCTACCCAATTTGGGCTTGCACCCGAAAAAACA‑AGGTCACCGCCATTAAAATAGCGATATT‑CACCATTAACCATGGTGAGAATATATTTATGTCTTGCATACGCAATTAGACAATTCCCATGTAGTGATTGCATAGTTGACTTAATA‑TTACATAAACa < 1:18165/239‑1 (MQ=255) cctcc‑tTGAGCATCGGGAGAAAT‑AATGAAAGCGTGTCCCTTGAC‑ACGAATACAAAATTTT‑C‑aa > 2:725862/1‑63 (MQ=255) cctcc‑tTGAGCATCGGGAGAAAT‑AATGAAAGCGTGTCCCTTGAC‑ACGAATACAAAATTTT‑C‑aa < 1:725862/63‑1 (MQ=255) ctcc‑tTGAGCATCGGGAGAAAT‑AATGAAAGCGTGTCCCTTGAC‑ACGAATACAAAATTTT‑C‑AACAC‑AC‑TTATCTACTCGAATTTGGCTTGCATCCGCAAAAACC‑AGGTCACCGCCATTAAAATAGCGATATT‑CACCATTAACCATGGTGAGAATATATTTATGTCTTGCATACGCAATTAGACAATTCCCATGTAGt > 1:1230571/1‑196 (MQ=255) cGGGAGAAAT‑AATAACAGCCTGTCCCTTGAC‑ACGCATACAAAATTTT‑C‑AACAC‑AC‑TTATCTACTCGACTTTGGCTTGCATCCGCCAAACCC‑AGGTCACCGCCATTAAAATAGCGATATT‑CACCATCATCCATGTTGAGCATTTATTCATGTCTTGCATACGCAATTATACAATTCCCATGCAGTGATTGAATTGTTGATTTAAAA‑TTACATAAAAAAATACCTGTTATTTAAtatacc > 2:218223/1‑236 (MQ=255) gggAGAAAT‑AATGAAAGCGTGTCCCTTGAC‑ACGAATACAAAATTTT‑C‑AACAC‑AC‑TTATCTACTCGAATTTGGCTTGCATCCGCAAAAACC‑AGGTCACCGCCATTAAAATAGCGATATT‑CACCATTAACCCTGGTGAGAATCACTTTATGTCTTGCATACTCAATTAGACAATTCCCATGGAGTGATTGCATAGTTGAATTAATATTTACA‑AAAAAAATTTCTTTTTTTTAATGTAACa > 2:868180/1‑238 (MQ=255) aaaT‑AAAGAAAGCTTTCCATTTCAC‑ACAAAAACAAATTTCA‑C‑AACTC‑CC‑TTACCCACTCAAATTTGCCTTGCCACCCAAAAAACC‑AGGTCACCGCCATTAAAATAGCGATATT‑CACCATTAACCATGGTGAGAATATATTTATGTCTTGCATACTCAATTAGACAATTCCCATGTAGTGATTGCATAGTTGACTTAATA‑TTACATAAACATATTACTGTTTATTAATGTAGCAcgccgc < 1:315135/239‑1 (MQ=255) | TGCTCATCCTCAAGAAAAACAGATAACAACGCAAAGATTAATGCTCTTTTACGTAG‑CATTTCTGCATAGCGAAGATTCTTATTCTGCGATAGTTGCGCAACTTCCTGAAAAACAGGAATATCTCTACTACAGTGATGAACGAGTAATGAAGAAACTTTTTTATGT‑GCATGAAGATTTAAT‑GCCTCCTCC‑TTGAGCATCGGGAGAAAT‑AATGAAAGCGTGTCCCTTGAC‑ACGAATACAAAATTTT‑C‑AACAC‑AC‑TTATCTACTCGAATTTGGCTTGCATCCGCAAAAACC‑AGGTCACCGCCATTAAAATAGCGATATT‑CACCATTAACCATGGTGAGAATATATTTATGTCTTGCATACGCAATTAGACAATTCCCATGTAGTGATTGCATAGTTGACTTAATA‑TTACATAAACATATTACTGTTTATTAATGTAGCACGCCGC > NC_000913/3665422‑3665863 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |