Predicted mutation
evidence seq id position mutation freq annotation gene description
RA NC_000913 3,523,993 A→G 14.6% S375G (AGT→GGT)  mrcA → penicillin‑binding protein 1a, murein transglycosylase and transpeptidase

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009133,523,9930AG14.6% 166.6 / 2.9 72S375G (AGT→GGT) mrcApenicillin‑binding protein 1a, murein transglycosylase and transpeptidase
Reads supporting (aligned to +/- strand):  ref base A (27/33);  new base G (9/3);  total (36/36)
Fisher's exact test for biased strand distribution p-value = 1.11e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

CAGCAGGCCGCGCAGCAGGCGGTACGTAATAACGTGCTGGACTACGACATGCGCCACGGCTATCGCGGCCCGGCAAATGTGCTGTGGAAAGTGGGCGAGTCGGCGTGGGATAACAACAAGATTACCGATACGCTGAAGGCGCTGCCAACCTATGGTCCGCTGCTGCCTGCCGCAGTCACCAGCGCCAATCCTCAGCAAGCGACGGCGATGCTGGCGGACGGGTCGACCGTCGCATTGAGTATGGAAGGCGTTCGCTGGGCGCGTCCTTACCGTTCGGATACTCAGCAAGGACCGACGCCGCGTAAAGTGACCGATGTTCTGCAAACGGGTCAGCAAATCTGGGTTCGTCAGGTTGGCGATGCATGGTGGCTGGCACAAGTGCCGGAAGTGAACTCGGCGCTGGTGTCGATCAATCCGCAAAACGGTGCCGTTATGGCGCTGGTCGGTGGCTTTGATTTCAATCAGAGC  >  NC_000913/3523756‑3524223
                                                                                                                                                                                                                                             |                                                                                                                                                                                                                                       
cagcagGCCGCGCAGCAGGCGGTACGTAATAACGTGCTGGACTACGACATGCGCCACGGCTATCGCGGCCCGGCAAATGTGCTGTGGAAAGTGGGCGAGTCGGCGTGGGATAACAACAAGATTACCGATACGCTGAAGGCGCTGCCAACCTATGGTCCGCTGCTGCCTGCCGCAGTCACCAGCGCCAATCCTCAGCAAGCGACGGCGAGGCTGGCGGACGGGTCGACCGTCGCCTTGAg                                                                                                                                                                                                                                        >  1:237900/1‑239 (MQ=255)
       ccGCGGAGCAGGCGGTACGTAATAACGGGCTGGACTACGACATGCGCCACGGCTATCGCGGCCCGGCAAATGTGCTGTGGAAAGTGGGCGAGTCGGCGTGGGATAACAACAAGATTACCGATACGCTGAAGGCGCTGCCAACCTATGGTCCGCTGCTGCCTGCCGCAGTCACCAGCGCCAATCCTCAGCAAGCGACGGCGATGCTGGCGGACGGGTCGACCGTCGCATTGAGTATgg                                                                                                                                                                                                                                   <  1:164111/237‑1 (MQ=255)
           gcagaaGGCGGTACGTAATAACGGTCTGGACTAAGACATGCGCCAGGGCTATCGCGGCCCGGCAAATGTGCTGTGGAAAGGGGGCGAGTCGGCGTGGGATAACAACAAGATTACCGATACGCTGAAGGCGCTGCCAACCTATGGTCCGCTGCTGCCTGCCGCAGTCACCAGCGCCAATCCTCAGCAAGCGACGGCGATGCTGGCGGACGGGTCGACCGTCGCATTGAGTATGGAAGGCg                                                                                                                                                                                                                             <  1:863769/239‑1 (MQ=255)
                tggCGGTAGGTAATAACGTGTTGGACTACGACATGCCGCCCGGGCATCGCGGGCCGGCAAATGTGCTGTGCAAAGGGGGCGAGTCGGCGTGGGATAACAACAAGATTACCGAAACGCTGAAGGCGCTGCCAACCTATGGTCCGCTGCTGCCTGCCGCAGTCACCAGCGCCAATCCTCAGCAAGCGACGGCGATGCTGGCGGACGGGTCGACCGTCGCATTGAGTATGGAAGGCGTTCGc                                                                                                                                                                                                                        <  2:468315/238‑1 (MQ=255)
                agGCGGTTCGTAATACCGTGCTGGACGACGACAGGCGCCACGGCTAGCGCGGCCCGGCAAATGTGCTGTGGAAAGTGGGCGAGTCGGCGTGGGATAACAACAAGATTACCGATACGCTGAAGGCGCTGCCAACCTATGGTCCGCTGCTGCCTGCCGCAGTCACCAGCGCCAATCCTCAGCAAGCGACGGCGATGCTGGCGGACGGGTCGACCGTCGCATTGAGTATGGAAGGCGTTCg                                                                                                                                                                                                                         <  1:130869/238‑1 (MQ=255)
                    ggcaCGTAATAACGTGCTGGACTACCACATGCGCCACGGCTATCGCGGCCCGGCAAATGTGCTGTGGAAAGTTGGCGAGTCGGCGTGGGATAACAACAAGATTACCGATACGCTGAAGGCGCTGCCAACCTATGGTCCGCTGCTGCCTGCCGCAGTCCCCAGCGCCCATCCTCAGCAAGCGACGCCGAGGCTGGTGGCGGGGGCGGCCGTCGCATTGAGGAGGGAAGGGGttgtggggg                                                                                                                                                                                                                    >  2:577558/4‑232 (MQ=255)
                       aCGTAATAACGTGCTGGACTACGACATGCGCCACGGCTATCGCGGCCCGGCAAATGTGCTGTGGAAAGTGGGCGAGTCGGCGTGGGATAACAACAAGATTACCGATACGCTGAAGGCGCTGCCAACCTATGGTCCGCTGCTGCCTGCCGCAGTCACCAGCGCCAATCCTCAGCAAGCGACGGCGATGCTGGCGGGCGGGCCGACCGTGGCATTGGCAAGGGAAGGGGTTGGGGGGgcgc                                                                                                                                                                                                                >  2:537951/1‑239 (MQ=255)
                       aCGTAATAACGTGCTGGACTACGACATGCGCCAAGGCTATCGCGGCCCGGCAAATGTGCTGTGGAAAGTGGGCGAGTCGGCGTGGGATAACAACAAGATTACCGATACGCTGAAGGCGCTGCCAACCTATGGTCCGCTGCTGCCTGCCGCAGTCACCAGCGCCAATCCTCAGCAAGCGACGGCGATGCTGGCGGACGGGTCGACCGTCGCATTGAGTATGGAAGGCGTTCGCTGGgcg                                                                                                                                                                                                                 <  1:409090/238‑1 (MQ=255)
                         gTAATAACGTGCTGGACTACGACATGCGCCACGGCTATCGCGGCCCGGCAAATGTGCTGTGGAAAGTGGGCGAGTCGGCGTGGGATAACAACAAGATTACCGATACGCTGAAGGCGCTGCCAACCTATGGTCCGCTGCTGCCTGCCGCAGTCACCAGCGCCAATCCTCAGCAAGCGACGGCGATGCTGGCGGCCGGGTCGACCGTCGCCTTGAGTATGGAAGGCGTTCGCTGGGcgcg                                                                                                                                                                                                               >  1:553807/1‑238 (MQ=255)
                             taaCGTGCTGGACTACGACATGCGCCACGGCTATCGCGGCCCGGCAAATGTGCTGTGGAAAGTGGGCGAGTCGGCGTGGGATAACAACAAGATTACCGCTACGCTGAAGGCGCTGCCAACCTATGGTCCGCTGCTGCCTGCCGCAGTCACCAGCGCCCATCCTCAGCAAGCGACGGCGATGCCGGCGGACGGGTCGACCGTCGCATTCAGTAGTGAAGGGGTTGCCTggggcgggcct                                                                                                                                                                                                           >  1:697172/1‑230 (MQ=255)
                                cGTGCTGGACTACGACATGCGCCACGGCTATCGCGGCCCGGCAAATGTGCTGTGGAAAGTGGGCGAGTCGGCGTGGGATAACAACAAGATTACCGATACGCTGAAGGCGCTGCCAACCTATGGTCCGCTGCTGCCTGCCGCAGTCACCAGCGCCAATCCTCAGCAAGCGCCGGGCATGCTGGCGGACGGGTCGACGGTCGCCTTGAGTATGGAGGGCGTCCGCGGGGGGCGGCCTTAcg                                                                                                                                                                                                       >  2:854848/1‑238 (MQ=255)
                                cGTGCTGGACTACGACATGCGCCACGGCTATCGCGGCCCGGCAAATGTGCTGTGGAAAGTGGGCGAGTCGGCGTGGGATAACAACAAGATTACCGATACGCTGAAGGCGCTGCCAACCTATGGTCCGCTGCTGCCTGCCGCAGTCACCAGCGCCAATCCTCAGCAAGCGACGGCGATGCTGGCGGACGGGTCGACCGTCGCATTGAGTATGGAAGGCGTTCGCTGGGCGCGGCCTTAcc                                                                                                                                                                                                       >  1:474851/1‑239 (MQ=255)
                                cGTGCTGGACTACGACATGCGCCACGGCTATCGCGGCCCGGCAAATGTGCTGTGGAAAGTGGGCGAGTCGGCGTGGGATAACAACAAGATTACCGATACGCTGAAGGCGCTGCCAACCTATGGTCCGCTGCTGCCTGCCGCAATCACCAGCGCCAATCCTCCGCAAGCGACGGCGGTGCTGGCGGCAGGGGCGAACGGCCCCTTGAGAAGGGAGGGGGGCCGCTGGTGCGCGCCTTAcc                                                                                                                                                                                                       >  2:739856/1‑239 (MQ=255)
                                  tGCTGGACTACGACATGCGCCACGGCTATCGCGGCCCGGCAAATGTGCTGTGGAAAGTGGGCGAGTCGGCGTGGGATAACAACAAGATTACCGATACGCTGAAGGCGCTGCCAACCTATGGTCCGCTGCTGCCTGCCGCAGTCACCAGCGCCAATCCTCAGCAAGCGCCGGCGATGCTGGCGGACGGGTCGACCGTCGCATTGGGTATGGAAGGCGTTCCTTGGGGCCGTCCTTCCCGt                                                                                                                                                                                                     >  1:227570/1‑239 (MQ=255)
                                  tGCTGGACTACGACATGCGCCACGGCTATCGCGGCCCGGCAAATGTGCTGTGGAAAGTGGGCGAGTCGGCGTGGGATAACAACAAGATTACCGATACGCTGAAGGCGCTGCCAACCTATGGTCCGCTGCTGCCTGCCGCAGTCACCAGCGCCAATCCTCAGCAAGCGACGGCGATGCTGGCGGACGGGTCGACCGTCGCATTGGGTATGGAAGGCGTTCGCTGGGCCCGTCCTTACCGt                                                                                                                                                                                                     >  1:17239/1‑239 (MQ=255)
                                   gCTGGACTACGACATGCGCCACGGCTATCGCGGCCCGGCAAATGTGCTGTGGAAAGTGGGCGAGTCGGCGTGGGATAACAACAAGATTACCGATACGCTGAAGGCGCTGCCAACCTATGGTCCGCTGCTGCCTGCCGCAGTCACCAGCGCCAATCCTCAGCAAGCGACGGCGATGCTGGCGGACGGGTCGACCGTCGCATTGGGGATGGAAGGCGTTCCCTGGGCGCGGCCTTACCGt                                                                                                                                                                                                     >  1:433031/1‑238 (MQ=255)
                                    tggggttACGAAATGCGCCGCGGGTTGCGGGGCCCGGCAAATGTGTTGTGGAAAGTGGGCGAGTCGGCGTGGGATAACAACAAGATTCCCGATACGCTGAAGGCGCTGCCAACCTATGGGCCGCTGCTGCCTGCCGCAGTCACCAGCGCCAATCCTCAGCAAGCGACGGCGATGCTGGCGGACGGGTCGACCGTCGCATTGAGTATGGAAGGCGTTCGCTGGGCGCGTCCTTACCGTTc                                                                                                                                                                                                   <  2:237900/233‑1 (MQ=255)
                                    cTGGACTACGACATGCGCCACGGCTATCGCGGCCCGGCAAATGTGCTGTGGAAAGTGGGCGAGTCGGCGTGGGGTAACAACAAGATTACCGATACGCTGAAGGCGCTGCCAACCTATGGGCCGCTGCGGCCTGCCGCAGTCCCCAGCGCCAATCCCCACCGAGCGACGGCGCTGCGGTCGGGCGGCTCACCCGGCGCACTGGGGTCGGAACGCGGCCGCTGGGCGCGCCCCTACCGtgt                                                                                                                                                                                                   >  2:715715/1‑237 (MQ=255)
                                     tGGACTTAGAAATGCGCCACGGCTATCGCGGCCCGGCAAATGTGCTGTGGAAAGGGGGCGAGTCGGCGTGGGATAACAACAAGATTACCGATACGCTGAAGGCGCTGCCAACCTATGGTCCGCTGCTGCCTGCCGCAGTCACCAGCGCCAATCCTCAGCAAGCGACGGCGATGCTGGCGGACGGGTCGACCGTCGCATTGAGTATGGAAGGCGTTCGCTGGGCGCGTCCTTACCGTTc                                                                                                                                                                                                   <  1:556067/238‑1 (MQ=255)
                                     tGGACTACGACATGCGCCACGGCTATCGCGGCCCGGCAAATGTGCTGTGGAAAGTGGGCGAGTCGGCGTGGGATAACAACAAGATTACCGATACGCTGAAGGCGCTGCCAACCTATGGTCCGCTGCTGCCTGCCGCAGTCACCAGCGCCAATCCTCAGCAAGCGACGGCGATGCTGGCGGACGGGTCGACCGTCGCATTGAGTATGGAAGGCGTTCGCTGGGCGCGTCCTTACCGTTCg                                                                                                                                                                                                  <  1:7972/239‑1 (MQ=255)
                                           aCGACATGCGCCACGGCTAACGCGGCCCGGCAAATGTGCTGTGGAAAGTGGGCGAGTCGGCGTGGGATAACAACAAGATTACCGATACGCTGAAGGCGCTGCCAACCTATGGTCCGCTGCTGCCTGCCGCAGTCACCAGCGCCAATCCTCAGCAAGCGACGGCGATGCTGGCGGACGGGTCGACCGTCGCATTGAGTATGGAAGGCGTTCGCTGGGCGCGTCCTTACCGTTCGGATACt                                                                                                                                                                                            <  1:856642/239‑1 (MQ=255)
                                            cGACATGCGCCACGGCTATCGCGGCCCGGCAAATGTGCTGTGGAAAGTGGGCGAGTCGGCGTGGGATAACAACAAGATTACCGATACGCTGAAGGCGCTGCCAACCTATGGTCCGCTGCTGCCTGCCGCAGTCACCAGCGCCCATCCTCAGCAAGCGACGGCGATGCTGGCGGCCGGGTCTACCGTCGCCTTGGGAGTGGAAGGCGTTCGCCGGGGGCGTCCTTACCGGTCGGGAACTc                                                                                                                                                                                           >  2:774255/1‑239 (MQ=255)
                                                 tGCGCCACGGCTATCGCGGCCCGGCAAATGTGCTGTGGAAAGTGGGCGAGTCGGCGTGGGATAACAACAAGATTACCGATACGCTGAAGGCGCTGCCAACCTATGGTCCGCTGCTGCCTGCCGCAGTCACCAGCGCCAATCCTCAGCAAGCGACGGCGCTGCTGGCGGACGGGTCGCCCGTCGCATTGAGAAAGGAAGGCGTCCGCCGGCCGCGCCCTTACCGTTCGGATACCCACCaa                                                                                                                                                                                      >  2:62985/1‑239 (MQ=255)
                                                 tGCGCCACGGCTATCGCGGCCCGGCAAATGTGCTGTGGAAAGTGGGCGAGTCGGCGTGGGATAACAACAAGATTACCGATACGCTGAAGGCGCTGCCAACCTATGGTCCGCTGCTGCCTGCCGCAGTCACCAGCGCCAATCCTCAGCAAGCGACGGCGATGCTGGCGGATGGGTCGACCGTCGCATTGAGTATGGAAGGCGTTCGCTTGGCGCGTCCTTACCGTTCGGATACTCaccca                                                                                                                                                                                      >  1:440803/1‑235 (MQ=255)
                                                 tGCGCCACGGCTATCGCGGCCCGGCAAATGTGCTGTGGAAAGTGGGCGAGTCGGCGTGGGATAACAACAAGATTACCGATACGCTGAAGGCGCTGCCAACCTATGGTCCGCTGCTGCCTGCCGCAGTCACCAGCGCCAATCCTCAGCAAGCGACGGCGATGCTGGCGGACGGGTCGACCGTCGCATTGAGTATGGAAGGCGTTCGCTGGGCGCGTCCTTACCGTTCGGATACTCAGCaa                                                                                                                                                                                      >  1:625510/1‑239 (MQ=255)
                                                 tGCGCCACGGCTATCGCGGCCCGGCAAATGTGCTGTGGAAAGTGGGCGAGTCGGCGTGGGATAACAACAAGATTACCGATACGCTGAAGGCGCTGCCAACCTATGGTCCGCTGCTGCCTGCCGCAGTCACCAGCGCCAATCCTCAGCAAGCGACGGCGATGCTGGCGGACGGGTCGACCGTCGCATTGAGTATGGAAGGCGTTCGCTGGGCCCGTCCTTACCGTTCGGATACTCAGCaa                                                                                                                                                                                      >  1:791164/1‑239 (MQ=255)
                                                 tGCGCCACGGCTATCGCGGCCCGGCAAATGTGCTGTGGAAAGTGGGCGAGTCGGCGTGGGATAACAACAAGATTACCGAAACGCTGAAGGCGCTGCCAACCTATGGTCCGCTGCTGCCTGCCGCAGTCACCAGCGCCAATCCTCAGCAAGCGACGGCGATGCTGGCGGACGGGGCGGCCGGCCCATTGGGTCTGGAAGGCGGTAGCCGGGCCCGGCCTTACCGCCCGGaatccaagcaa                                                                                                                                                                                      >  2:540296/1‑229 (MQ=255)
                                                           cTATCGCGGCCCGGAAAATGTGCTGTGGAAAGTGGGCGAGTCGGCGTGGGATAACAACAAGATTACCGATACGCTGAAGGCGCTGCCAACCTATGGTCCGCTGCTGCCTGCCGCAGTCACCAGCGCCAATCCTCAGCAAGCGACGGCGATGCTGGCGGACGGGTCGACCGTCGCATTGAGTATGGAAGGCGTTCGCTGGGCGCGTCCTTACCGTTCGGATACTCAGCAAGGACCGAcg                                                                                                                                                                             <  1:887127/238‑1 (MQ=255)
                                                                   gCCCGGCAAATGTGCTGTGGAAAGTGGGCGAGTCGGCGTGGGATAACAACAAGATTACCGATACGCTGAAGGCGCTGCCAACCTATGGTCCGCTGCTGCCTGCCGCAGTCACCAGCGCCAATCCTCAGCAAGCGACGGCGATGCTGGCGGACGGGTCGACCGTCGCATTGAGTATGGAAGGCGTTAGCTGGGCCCGTCCTTACCGTTCGGATACTCAGCAAGGCCCGCCGCCGCGTaaa                                                                                                                                                                    >  1:178938/1‑239 (MQ=255)
                                                                   gCCCGGCAAATGTGCTGTGGAAAGTGGACGAGTCGGCGTGGGATAACAACCAGATTACCGATACGCTGAAGGCGCTGCCAACCTATGGTCCGCTGCTGCCTGCCGCAGTCACCAGCGCCAATCCTCAGCAAGCGACGTCGATGCTGGGGGCACGGTCGACCGGCGCATTGGGTATGGAAGGCGTTCTCTGGCCGCGGCCTTACCCGTCGGCAACCCAACAAGGGCCGaagggggcgaaa                                                                                                                                                                    >  2:879196/1‑228 (MQ=255)
                                                                                 cTGTGGAAAGTGGGCGAGTCGGCGTGGGATAACAACAAGATTACCGATACGCTGAAGGCGCTGCCAACCTATGGTCCGCTGCTGCCTGCCGCAGTCACCAGCGCCAATCCTCAGCAAGCGACGGCGATGCTGGCGGACGGGTCGACCGTCGCATTGAGAATGGAAGGCGTTCGCTGGGCGCGTCCTTACCGTTCGGATACTCAGCAAGGACCGACGCCGCTGAAAGGGACCGCTGt                                                                                                                                                         >  1:415987/1‑236 (MQ=255)
                                                                                  tgtgGAAAGTGGGCGAGTCGGCGTGGGATAACAACAAGATTACCGATACGCTGAAGGCGCTGCCAACCTATGGTCCGCTGCTGCCTGCCGCAGTCACCAGCGCCAATCCTCAGCAAGCGACGGCGATGCTGGCGGACGGGTCGACCGTCGCATTGAGTATGGAAGGCGTTCGCTGGGCGCGTCCTTACCGTTCGGATACTCAGCAAGGACCGACGCCCCGTAAAGTGACCGAGGtctt                                                                                                                                                      >  1:694734/1‑235 (MQ=255)
                                                                                               cGAGTCGGCGTGGGATAACAACAAGATTACCGATACGCTGAAGGCGCTGCCAACCTATGGTCCGCTGCTGCCTGCCGCAGTCACCAGCGCCAATCCTCAGCAAGCGACGGCGATGCTGGCGGACGGGTCGACCGTCGCATTGAGTATGGAAGGCGTTCGCTGGGCGCGTCCTTACCGTTCGGATACTCAGCAAGGACCGACGCCGCGTAAAGTGACCGATGTTCTGCAAACGGGTCAg                                                                                                                                         <  1:672889/238‑1 (MQ=255)
                                                                                                    cgggttGGGATAACAAAAAGTTTCCCGATACGCTGAAGGCGCTGCCAACCTATGGTCCGCTGCTGCCGGCCGCAGGCACCAGCGCCAAGCCTCAGCAAGCGACGGCGATGCTGGCGGACGGGTCGACCGTCGCATTGAGTATGGAAGGCGTTCGCTGGGCGCGTCCTTACCGTTCGGATACTCAGCAAGGACCGACGCCGCGTAAAGTGACCGATGTTCTGCAAACGGGTCAGCAAAt                                                                                                                                    <  2:276526/233‑1 (MQ=255)
                                                                                                                     aaGATTACCGATCCGCTGAAGGCGCTGCCAACCTATGGTCCGCTGCTGCCTGCCGCAGTCACCAGCGCCAATCCTCAGCAAGCGAGCGCGATGCCGGCGGACGGGTCGACCGTCGCATTGAGTATGGAAGGCGTTCGCTGGGCGCGTCCTTACCGTTCGGATACTCAGCAAGGACCGACGCCGCGTAAAGTGACCGATGTTCTGCAAACGGGTCAGCAAATCTGGGTTCGTCAGGTTgg                                                                                                                  <  1:858796/239‑1 (MQ=255)
                                                                                                                      aGATTACCGATACGCTGAAGGCGCTGCCAACCTATGGTCCGCTGCTGCCTGCCGCAGTCACCAGCGCCAATCCTCAGCAAGCGACGGCGATGCTGGCGGACGGGTCGACCGTCGCATTGAGTATGGAAGGCGTTCGCTGGGCGCGTCCTTACCGTTCGGAGACTCAGCAAGGACCGACGGCGCGTAAAGTGACCGATTTTCTGCAAACGGGGCCACAAATCTGGGTGCGACCGGGTggg                                                                                                                 >  2:401611/1‑238 (MQ=255)
                                                                                                                      aGATTACCGATACGCTGAAGGCGCTGCCAACCTATGGTCCGCTGCTGCCTGCCGCAGTCACCAGCGCCAATCCTCAGCAAGCGACGGCGATGCTGGCGGACGGGTCGACCGTCGCATTGAGTATGGAAGGCGTTCGCTGGGCCCGTCCTTACCGTTCGGATACTCAGCAAGGACCGACGCCGCGGAAAGGGACCAAGGTTTTGCAAACGGGTCAGAAAAACGGGGTTCGACGGGGTggg                                                                                                                 >  2:826970/1‑238 (MQ=255)
                                                                                                                        aTTACCGATACGCTGAAGGCGCTGCCAACCTATGGGCCGCTGCGGCCTGCCGCAGTCACCAGCGCCAATCCTCAGCAAGCGACGGCGATGCTGGCGGACGGGTCGACCGTCGCATTGAGTATGGAAGGCGTTCGCTGGGCGCGTCCTTACCGTTCGGATACTCAGCAAGGACCGACGCCGCGTAAAGTGACCGATGTTCTGCAAACGGGTCAGCAAATCTGGGTTCGTCAGGTTGGCGa                                                                                                               <  1:112425/239‑1 (MQ=255)
                                                                                                                          tACCGATACGCTGAAGGCGCTGCCAACCTATGGTCCGCTGCTGCCTGCCGCAGTCACCAGCGCCAATCCTCAGCAAGCGACGGCGATGCTGGCGGACGGGTCGACCGTCGCATTGAGTATGGAAGGCGTTCGCTGGGCGCGTCCTTACCGTTCGGATACTCAGCAAGGACCGACGCCGCGTAAAGTGACCGATGTTCTGCAAACGGGt                                                                                                                                            >  2:86586/1‑208 (MQ=255)
                                                                                                                          tACCGATACGCTGAAGGCGCTGCCAACCTATGGTCCGCTGCTGCCTGCCGCAGTCACCAGCGCCAATCCTCAGCAAGCGACGGCGATGCTGGCGGACGGGTCGACCGTCGCATTGAGTATGGAAGGCGTTCGCTGGGCGCGTCCTTACCGTTCGGATACTCAGCAAGGACCGACGCCGCGTAAAGTGACCGATGTTCTGCAAACGGGt                                                                                                                                            <  1:86586/208‑1 (MQ=255)
                                                                                                                              gATACGCTGAAGGCGCGTCCAACCTATGGTCCGCTGCTGCCTGCCGCAGTCACCAGGGCCAATCCTCAGCAAGCGACGGCGATGCTGGCGGACGGGTCGACCGTCGCATTGAGTATGGAAGGCGTTCGCTGGGCGCGTCCTTACCGTTCGGATACTCAGCAAGGACCGACGCCGCGTAAAGTGACCGATGTTCTGCAAACGGGTCAGCAAATCTGGGTTCGTCAGGTTGGCGATGCAtg                                                                                                         <  1:630239/239‑1 (MQ=255)
                                                                                                                              cttccccTGACGGGGCTGCCAACCTTTGGGCCGCGGCTGCCTGCCGCAGTCCCCGGCGCCAATCCCCAGCAAGTGACGGCGATGCTGGCGGCCGGGTCGACCGTCGCATTGAGTATGGAAGGCGTTCGCTGGGCGCGTCCTTACCGTTCGGATACTCAGCAAGGACCGACGCCGCGTAAAGTGACCGATGTTCTGCAAACGGGTCAGCAAATCTGGGTTCGTCAGGTTGGCGATGCAtg                                                                                                         <  2:301616/233‑1 (MQ=255)
                                                                                                                               aTACGCTGAAGGCGCTGCCAACCTATGGTCCGCTGCTGCCTGCCGCAGTCACCAGCGCCAATCCTCAGCAAGCGACGGCGATGCTGGCGGACGGGTCGACCGTCGCATTGAGTATGGAAGGCGTTCTCTGGGCGCGGCCTTTCCGTTCGGTCACTCAGGCAGGACCTGCGCCGCGGAAAGTGTCCACTGCTCGGCAAACCGGGCCACAAATTCGGGGGCGACAGGTTgggggtggcatg                                                                                                        >  2:833484/1‑229 (MQ=255)
                                                                                                                                 ccGCTGAAGGCGCTGCCAACCTATGGTCCGCTGCTGCCTGCCGCAGTCCCCAGCGCCAATCCTCAGCAAGCGACGGCGATGCTGGCGGACGGGTCGACCGTCGCATTGAGTATGGAAGGCGTTCGCTGGGCGCGTCCTTACCGTTCGGATACTCAGCAAGGACCGACGCCGCGTAAAGTGACCGATGTTCTGCAAACGGGTCAGCAAATCTGGGTTCGTCAGGTTGGCGATGCAtggtg                                                                                                      <  1:584342/238‑1 (MQ=255)
                                                                                                                                  cGCTTAGGGGGCTGCCCCCCTATGGTCCGCTGCGGCCCGGCGCAGTCCCCAGCGCCAATCCCCAGCAAGCGACGGCGATGCTGGCGGCCGGGTCGACCGTCGCATTGAGTATGGAAGGCGTTCGCTGGGCGCGTCCTTACCGTTCGGATACTCAGCAAGGACCGACGCCGCGTAAAGTGACCGATGTTCTGCAAACGGGTCAGCAAATCTGGGTTCGTCAGGTTGGCGATGCAtggtgg                                                                                                     <  2:625510/239‑1 (MQ=255)
                                                                                                                                     ggAAGGCGCTGCCAACCTATGGTCCGCTGCTGCCTGCCGGAGTCACCAGCGCCAATCCTCAGCAAGCGACGGCGATGCTGGCGGACGGGTCGACCGTCGCATTGAGTATGGAAGGCGTTCGCTGGGCGCGTCCTTACCGTTCGGATACTCAGCAAGGACCGACGCCGCGTAAAGTGACCGATGTTCTGCAAACGGGTCAGCAAATCTGGGTTCGTCAGGTTGGCGATGCATGGtggct                                                                                                   <  1:14787/237‑1 (MQ=255)
                                                                                                                                       aaGGCGCTGCGAACCTATGGTCCGCTGCTGCCTGCCGCAGTCACCAGCGCCAATCCTCAGCAAGCGACGGCGATGCTGGCGGACGGGTCGACCGTCGCATTGGGTTTGGAAGGCGTTCGCTGGGCGCGGCCTTACCGTTCGGTTACTCAGCAACGCCCGCCTCCGCGTAAAGGGACAGACGTACTGCCAACGGTGGCGCAAATCTGGGGTCGCCAGGTTGGCCATGCAtgggggggggc                                                                                                >  2:607312/1‑234 (MQ=255)
                                                                                                                                           cgcgGCCAACCTATGGTCCGCTGCTGCCTGCCGCAGTCACCAGCGCCAATCCTCAGCAAGCGACGGCGATGCTGGCGGACGGGTCGACCGTCGCATTGAGTATGGAAGGCGTTCGCTGGGCGCGTCCTTACCGTTCGGATACTCAGCAAGGACCGACGCCGCGTAAAGTGACCGATGTTCTGCAAACGGGTCAGCAAATCTGGGTTCGTCAGGTTGGCGATGCATGGTGGCTGGcaca                                                                                             <  1:778982/238‑1 (MQ=255)
                                                                                                                                                          gTCCGCTGCTGCCTGCCGCAGTCACCAGCGCCAATCCTCAGCAAGCGACGGCGATGCTGGCGGACGGGTCGACCGTCGCATTGAGTGTGGAAGGGGTTCGCTGGGCGCGTCCTTACCCTTCGGGTACTCAGCAAGGACCGACGCCCCGTAAATTGACCGAGGTTCTGCAAACGGGTCACCAATCCTGGGTTCGCCAGCTTGGCGCTGAATGGGGGCTGGGCCAAGGGCgggggagaagc                                                                             >  2:213736/1‑231 (MQ=255)
                                                                                                                                                          gTCCGCTGCTGCCTGCCGCAGTCACCAGCGCCAATCCTCAGCAAGCGACGGCGATGCTGGCGGACGGGTCGACCGTCGCATTGAGTATGGAAGGCGTTCGCTGGGCGCGTCCTTACCGTTCGGATACTCAGCAAGGACCGACGCCGCGTAAAGTGACCGATGTTCTGCAAACGGGTCAGCCAATCTGGGTTCGTCAGGGTGGCGATGGCTGGGGGCTGGCAAAAGTGCCGGAAGGGAAc                                                                             >  2:199985/1‑239 (MQ=255)
                                                                                                                                                            ccGCTGGCGCCTGGCGGAGTCACCAGCGTCAATCCTCAGCAAGCGGCGGCGATGCTGGCGGACGGGTCGACCGTCGCATTGAGTATGGAAGGCGTTCGCTGGGCGCGTCCTTACCGTTCGGATACTCAGCAAGGACCGACGCCGCGTAAAGTGACCGATGTTCTGCAAACGGGTCAGCAAATCTGGGTTCGTCAGGTTGGCGATGCATGGTGGCTGGCACAAGTGCCGGAAGTGAACt                                                                            <  1:888086/238‑1 (MQ=255)
                                                                                                                                                             cGCTGCTGCCTGCCGCAGTCACCAGCGCCAATCCTCAGCAAGCGACGGCGATGCTGGCGGACGGGTCGACCGTCGCATTGAGGATGGAAGGCGTTCGCTGGGCGCGTCCTTACCGTTCGGAGACTCAGCAAGGACCGACGCCGCGTAAAGGGACCGATGTTCTGCAAACGGGTCAGTCAATCTGGGGCCGTCAGGTTGGCGATGCATGGTGGCTGGACCAAATGCCGGAAGTGAAATca                                                                          >  2:54227/1‑238 (MQ=255)
                                                                                                                                                              cttggtccctgccGCTGTCACCAGCGCCAATCCTTAGACAGGGACGGGGATGCTGGCGGACGGGGCGACCGTCGCATTGAGTATGGAAGGCGTGCGCTGGGCGCGTCCTTACCGTTCGGATACTCAGCAAGGACCGACGCCGCGTAAAGTGACCGATGTTCTGCAAACGGGTCAGCAAATCTGGGTTCGTCAGGTTGGCGATGCATGGTGGCTGGCACAAGTGCCGGAAGTGAACTCgg                                                                         <  2:433031/232‑1 (MQ=255)
                                                                                                                                                               ctgctgCCTGCCGCAGTCACCAGCGCCAATCCTCAGCAAGCGACGGCGATGCTGGCGGACGGGTCGACCGTCGCATTGAGTATGGAAGGCGTTCGCTGGGCGCGTCCTTACCGTTCGGATACTCAGCAAGGACCGCCGCCGCGTAAAGGGACCGATGTTCTGCAAACGGGTCAGCAAACCTGGGTTCGTCAGGATGGGGCGGCATGGGGGCTGCAACAAAATCCGGAAGGAAACTCggg                                                                        >  2:31988/1‑238 (MQ=255)
                                                                                                                                                               ctgctgCCTGCCGCAGTCACCAGCGCCAATCCTCAGCAAGCGACGGCGATGCTGGCGGACGGGTCGACCGTCGCATTGAGTATGGAAGGCGTTCGCTGGGCGCGTCCTTACCGTTCGGATACTCAGCAAGGACCGACGCCGCGTAAAGTGACCGATGTTCTGCAAACGGGTCAGCAAATCTGGGTTCGTCAGGTTGTCGATGCATGGTGGCTGGCACAAGTGCCGGAAGTGAACCCGgc                                                                        >  1:672837/1‑239 (MQ=255)
                                                                                                                                                                 tctgccggcCGGCTTCCCCAGGGCAAATCCTGCGGAAGCGGCGGGGGTGCTGGGGGACGGGGCGACCGTCGCATTGAGTATGGAAGGCGTTCGGTGGGCGCGTCCTTACCGTTCGGATACTCAGCAAGGACCGACGCCGCGTAAAGTGACCGATGTTCTGCAAACGGGTTAGCAAATCTGGGTTCATCAGGTTGGCGATGCATGGTGGCTGGCACAAGTGCCGGAAGTGAACTCGgcgc                                                                      <  2:798507/238‑1 (MQ=255)
                                                                                                                                                                 gctgcCTGCCGCAGTCACCAGCGCCAATCCTCAGCAAGCGACGGCGATGCTGGCGGACGGGTCGACCGTCGCATTGAGTATGGAAGGCGTTCGCTGGGCGCGTCCTTACCGTTCGGATACTCAGCAAGGACCGACGCCGCGTAAAGTGACCGATGTTCTGCAAACGGGTCAGCAAATCTGGGTTCGTCAg                                                                                                                       <  1:718241/190‑1 (MQ=255)
                                                                                                                                                                 gctgcCTGCCGCAGTCACCAGCGCCAATCCTCAGCAAGCGACGGCGATGCTGGCGGACGGGTCGACCGTCGCATTGAGTATGGAAGGCGTTCGCTGGGCGCGTCCTTACCGTTCGGATACTCAGCAAGGACCGACGCCGCGTAAAGGGACCGATGTTCTGCAAACGGGTCAGCAAATCTGGGTTCGTCAg                                                                                                                       >  2:718241/1‑190 (MQ=255)
                                                                                                                                                                 gctgcCTGCCGCAGGCACCAGCGCCAATCCTCAGCAAGCGACGGCGATGCTGGCGGACGGGTCGACCGTTGCATTGAGTATGGAAGGCGTTCGCTGGGCGCGTCCTTACCGTTCGGATACTCAGCAAGGACCGACGCCGCGTAAAGTGACCGATGTTCTGCAAACGGGTCAGCAAATCTGGGTTCGTCAGGTTGGCGATGCATGGTGGCTGGCACAAGTGCCGGAAGTGAACTCGgcgc                                                                      <  1:526197/239‑1 (MQ=255)
                                                                                                                                                                   tgcctgccGCAGTCACCAGCCCCAATCCTCAGCAGGCGACGGCGATGCTGGCGGACGGGTCGACCGTCGCATTGAGTATGGAAGGCGTTCGCTGGGCGCGTCCTTACCGTTCGGATACTCAGCAAGGACCGACGCCGCGTAAAGTGACCGATGTTCTGCAAACGGGTCAGCAAATCTGGGTTCGTCAGGTTGGCGATGCATGGTGGCTGGCACAAGTGCCGGAAGTGAACTCGGCGCTg                                                                    <  1:616813/239‑1 (MQ=255)
                                                                                                                                                                          cGCAGTCACCAGCGCCAATCCTCAGCAAGCGACGGCGATGCTGGCGGACGGGTCGACCGTCGCATTGAGTATGGAAGGCGTTCGCTGGGCGCGTCCTTACCGTTCGGATACTCAGCAAGGACCGACGCCGCGTAAAGTGACCGATGTTCTGCAAACGGGTCAGCAAATCTGGGTTCGTCAGGTTGGCGATGCATGGTGGCGGGCACAAGGGCCGGAAGTGAACTGGGCGCTGGGGTCgt                                                             >  1:519968/1‑238 (MQ=255)
                                                                                                                                                                             aatccccAGCGCCAATCCGCAACAAGGTGCGGCGATGCTGGCGGACGGGTCGACCGTCGCATTGAGTATGGAAGGCGTTCGCTGGGCGCGTCCTTACCGTTCGGATACTCAGCAAGGACCGACGCCGCGTAAAGTGACCGATGTTCTGCAAACGGGTCAGCAAATCTGGGTTCGTCAGGTTGGCGATGCATGGTGGCTGGCACAAGTGCCGGAAGTGAACTCGGCGCTGGTGTCGATCa                                                          <  1:540296/234‑1 (MQ=255)
                                                                                                                                                                                       gcCAATCCTCAGCAAGCGACGGCGATGCTGGCGGGCGGGTCGACCGTCGCATTGAGTATGGAAGGCGTTCGCTGGGCGCGTCCTTACCGTTCGGATACTCAGCAAGGACCGACGCCGCGTAAAGTGACCGATGTTCTGCAAACGGGTCAGCAAATCTGGGTTCGTCAGGTTGGCGATGCATGGTGGCTGGCACAAGTGCCGGAAGTGAACTCGGCGCTGGTGTCGATCAATCCGCaaaa                                                <  1:66021/239‑1 (MQ=255)
                                                                                                                                                                                          aaTCCTACGCAAGGCGCGGCGGTGCCGGCGGACGGTTCGGCCGTCGCATTGAGTATGGAAGGCGTTCGCTGGGCGCGTCCTTACCGTTCGGATACTCAGCAAGGACCGACGCCGCGTAAAGTGACCGATGTTCTGCAAACGGGTCAGCAAATCTGGGTTCGTCAGGTTGGCGATGCATGGTGGCTGGCACAAGTGCCGGAAGTGAACTCGGCGCTGGTGTCGATCAATCCGCAAAACgg                                             <  1:318871/239‑1 (MQ=255)
                                                                                                                                                                                                 aGCAAGCGACGGCGATGCTGGCGGACGGGTCGACCGTCGCATTGAGTATGGAAGGCGTTCGCTGGGCGCGTCCTTACCGTTCGGATACTCAGCAAGGACCGACGCCGCGTAAAGTGACCGATGTTCTGCAAACGGGTCAGCAAATCTGGGTTCGTCAGGTTGGCGATGCATGGTGGCTGGCACAAGTGCCGGAAGTGAACTCGGCGCTGGTGTCGATCAATCCGCCAAACGGTGCCGtt                                      >  1:726627/1‑239 (MQ=255)
                                                                                                                                                                                                  gCAAGCGACGGCGATGCTGGCGGGCGGGTCGACCGTCGCATTGAGTATGGAAGGCGTTCGCTGGGCGCGTCCTTACCGTTCGGATACTCAGCAAGGACCGACGCCGCGTAAAGTGACCGATGTTCTGCAAACGGGTCAGCAAATCTGGGTTCGTCAGGTTGGCGATGCATGGTGGCTGGCACAAGTGCCGGAAGTGAACTCGGCGCTGGTGTCGATCAATCCGCAAAACGGTGCCGTTa                                     <  1:537951/239‑1 (MQ=255)
                                                                                                                                                                                                                     gggggcGGGTCGCCCTTCGCATGTGGTTTGGAGGGCGTTCTGCGGGCGCTTCCTTACCGTTCGGTTCCTCAGCAAGGACCGACGCCGGGTAAAGTGACCGATTTTCTGCAAACGGGTCAGCAAATCTGGGTTCGTCAGGTTGGCGATGCATGGTGGCTGGCACAAGTGCCGGAAGTGAACTCGGCGCTGGTGTCGATCAATCCGCAAAACGGTGCCGTTATGGCGCTGGTCGGTGGCtt                  <  2:672837/234‑1 (MQ=255)
                                                                                                                                                                                                                      gggACGGGGCGACCGTCGCATTGAGTATGGAAGGCGTTCGCTGGGCGCGTCCTTACCGTTCGGATACTCAGCAAGGACCGACGCCGCGTAAAGTGACCGATGTTCTGCAAACGGGTCAGCAAATCTGGGTTCGTCAGGTTGGCGATGCATGGTGGCTGGCACAAGTGCCGGAAGTGAACTCGGCGCTGGTGTCGATCAATCCGCAAAACGGTGCCGTTATGGCGCTGGTCGGTGGCtt                  <  1:774255/237‑1 (MQ=255)
                                                                                                                                                                                                                      cGGACGGGTCGACCGTCGCATTGAGTATGGAAGGCGTTCGCTGGGCGCGTCCTTACCGTTCGGATACTCAGCAAGGACCGACGCCGCGTAAAGTGACCGATGTTCTGCAAACGGGTCAGCAAATCTGGGTTCGTCAGGTTGGCGATGCATGGTGGCTGGCACAAGTGCCGGAAGTGAACTCGGCGCTGGTGTCGATCAATCCGCAAAACGGTGCCGTTATGGCGCTGGTCGGTGGCtt                  <  1:854848/238‑1 (MQ=255)
                                                                                                                                                                                                                                   cggtgCATTGGGTATGGAAGGCGTTCGCTGGGCGCGTCCTTACCGTTCGGATACTCAGCAAGGACCGACGCCGCGTAAAGTGACCGATGTTCTGCAAACGGGTCAGCAAATCTGGGTTCGTCAGGTTGGCGATGCATGGTGGCTGGCACAAGTGCCGGAAGTGAACTCGGCGCTGGTGTCGATCAATCCGCAAAACGGTGCCGTTATGGCGCTGGTCGGTGGCTTTGATTTCAATCaga    <  1:401611/235‑1 (MQ=255)
                                                                                                                                                                                                                                   cGTCGCATTGGGTAGGGAAGGCGTTCGCTGGGCGCGTCCTTACCGTTCGGATACTCAGCAAGGACCGACGCCGCGTAAAGTGACCGATGTTCTGCAAACGGGTCAGCAAATCTGGGTTCGTCAGGTTGGCGATGCATGGTGGCTGGCACAAGTGCCGGAAGTGAACTCGGCGCTGGTGTCGATCAATCCGCAAAACGGTGCCGTTATGGCGCTGGTCGGTGGCTTTGATTTCAATCaga    <  2:474851/239‑1 (MQ=255)
                                                                                                                                                                                                                                     tCGCATTGAGTATGGAAGGCGTTCGCTGGGCGCGTCCTTACCGTTCGGATACTCAGCAAGGACCGACGCCGCGTAAAGTGACCGATGTTCTGCAAACGGGTCAGCAAATCTGGGTTCGTCAGGTTGGCGATGCATGGTGGCTGGCACAAGTGCCGGAAGTGAACTCGGCGCTGGTGTCGTTCAATCCGCAAAACGGTGCCGTTATGGCGCTGGCCGGTGGCGTTGATTTCaacaaaaga  >  2:748215/1‑232 (MQ=255)
                                                                                                                                                                                                                                             |                                                                                                                                                                                                                                       
CAGCAGGCCGCGCAGCAGGCGGTACGTAATAACGTGCTGGACTACGACATGCGCCACGGCTATCGCGGCCCGGCAAATGTGCTGTGGAAAGTGGGCGAGTCGGCGTGGGATAACAACAAGATTACCGATACGCTGAAGGCGCTGCCAACCTATGGTCCGCTGCTGCCTGCCGCAGTCACCAGCGCCAATCCTCAGCAAGCGACGGCGATGCTGGCGGACGGGTCGACCGTCGCATTGAGTATGGAAGGCGTTCGCTGGGCGCGTCCTTACCGTTCGGATACTCAGCAAGGACCGACGCCGCGTAAAGTGACCGATGTTCTGCAAACGGGTCAGCAAATCTGGGTTCGTCAGGTTGGCGATGCATGGTGGCTGGCACAAGTGCCGGAAGTGAACTCGGCGCTGGTGTCGATCAATCCGCAAAACGGTGCCGTTATGGCGCTGGTCGGTGGCTTTGATTTCAATCAGAGC  >  NC_000913/3523756‑3524223

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: