| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 752,085 | G→A | 15.7% | L29F (CTC→TTC) | ybgQ ← | putative outer membrane protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 752,085 | 0 | G | A | 15.7% | 129.4 / 2.2 | 59 | L29F (CTC→TTC) | ybgQ | putative outer membrane protein |
| Reads supporting (aligned to +/- strand): ref base G (29/20); new base A (3/7); total (32/27) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.62e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
ATACACCGATCTATCTGTGGCAAGGACTGACGGATATCTGGTTTTAAACCAAATTTATCGACCAGTGAATCATTGATGCATGGAATGGTTTTGTCACCCTTTTTTT‑GCCAGTTAATTTTTTGCCCATTACTGATTTTGTTGTTATTCACCGC‑AACGCTAACAAAATATT‑CACCGGGAGCAATGACTCCTTTTTCCTTT‑AATAATGAAATATCAATGCGGTCGCGCATTGATTTATCGAGAACATTCAGATTGAATTCGACCGCCATTGCGCAAGGCATCGCCATGACCAGGCAGGATACAAAAGAGAGTCGATAAATATTCACGGTGTCCATACCTGATAAATATTTTATGAAAGGCGGCGATGATGCCGCCAAAATAATACTTATTTATAATCCAGCACGTAGGTTGCGTTAGCGGTTACTTCACCTGCCGTGACATCGACTGCATTATCAATTTG > NC_000913/751847‑752303 | attccccGATTTTTCTTGGGCAAGGGCTTAATGATATCTGGTGTTAAACCAAATTTATCGACCAGTGAAACATTGATGCATGGAATGGTTTTGTCGCCCTTTTTTT‑GCCAGTTAATTTTTTGCCCATTACTGATTTTGTTGTTATTCACCGC‑AACGCTAACAAAATATT‑CACCGGGAGCAATGACTCCTTTTTCCTTT‑AATAATGAAATATCAATGCGGTCGCGCATTGATTTATCgag < 2:243020/234‑1 (MQ=255) atctatctGTGGCAAGGACGGACGGATATCTGGTTTTAAACCAAATTTATCGACCAGTGCATCATTTATGCATGGAATGGTTTTGTCACCCTTTTTTT‑GCCAGTTAATTTTTTGCCCGTTACTGATTTTGTTGTTATTCACCGC‑AACGCTAACAAAATGTT‑CACCGCGAGCAATGCCTCCTTTTTCCTTT‑CATAAGGAAATGTCAATGCGGTCCGACAGTTATTTATCGGAACCATTCa > 1:886523/1‑239 (MQ=255) ctatctGGGGCAAGGACTGACGGATATCTGGTTTTAAACCAAATTTATCGACCAGTGAATCATTGATGCATGGAATGGTTTTGTCACCCTTTTTTT‑GCCAGTTAATTTTTTGCCCATTACTGATTTTGTTGTTATTCACCGC‑AACGCTAACAAAATATT‑CACCGGGAGCAATGACTCCTTTTTCCTTT‑AATAATGAAATATCAATGCGGTCGCGCATTGATTTATCGAGAACATTCAGa < 1:879420/239‑1 (MQ=255) tgtgGCAAGGACTGACGGATATCTGGTTTTAAACCAAATTTATCGACCAGTGAATCATTGATGCATGGAATGGTTTTGTCACCCTTTTTTT‑GCCAGTTAATTTTTTGCCCATTACTGATTTTGTTGTTATTCACCGC‑AACGCTAACAAAATATT‑CACCGGGAGCAATGACTCCTTTTTCCTTT‑AATAATGAAATATCAATTCGGTCGCGCATTGCTTTATCGAGAACATTCAGATTGaa > 1:429906/1‑239 (MQ=255) gtgGCAAGGACTGACGGATATCTGGTTTTAAACCAAATTTATCGACCAGTGAATCATTGATGCATGGAATGGTTTTGTCACCCTTTTTTT‑GCCAGTTAATTTTTTGCCCATTACTGATTTTGTTGTTATTCACCGC‑AACGCTAACAAAATATT‑CACCGGGAGCAATGACTCCTTTTTCCTTT‑AATAATGAAATATCAATGCGGTCGCGCATTGATTTACCGAGAACATTCAGATTGAAt > 1:791171/1‑239 (MQ=255) ggCAAGGACTGACGGATATCTGGTTTTAAACCAAATTTATCGACCAGTGAATCATTGATGCATGGAATGGTTTTGTCACCCTTTTTTT‑GCCAGTTAATTTTTTGCCCATTACTGATTTTGTTGTTATTCACCGC‑AACGCTAACAAAATATT‑CACCGGGAGCAATGACTCCTTTTTCCTTT‑AATAATGAAATATCAATGCGGTCGCGCATTGATTTATCGAAAAAATTAAAATTAAATTc > 2:53658/1‑239 (MQ=255) gCAAGGACTGACGGATATCTGGTTTTAAACCAAATTTATCGACCAGTGAATCATTGATGCATGGAATGGTTTTGTCACCCTTTTTTT‑GCCAGTTAATTTTTTGCCCATTACTGATTTTGTTGTTATTCACCGC‑AACGCTAACAAAATATT‑CACCGGGAGCAATGACTCCTTTTTCCTTT‑AATAATGAAATATCAATGCGGTCGCCCATTGATTTATCTAAAAAATTCAAATTGAAttag > 2:391064/1‑237 (MQ=255) ggACTGACGGATATCTGGTTTTAAACCAAATTTATCGACCAGTGAATCATTGATGCATGGAATGGTTTTGTCACCCTTTTTTT‑GCCAGTTAATTTTTTGCCCATTACTGATTTTGTTGTTATTCACCGC‑AACGCTAACAAAATATT‑CACCGGGAGCAATGACTCCTTTTTCCTTT‑AATAATGAAATATCAATGCGGTCGCGCATTGATTTATCGAGAACATTCAGATTGAATTCGAcc > 1:709917/1‑238 (MQ=255) tttttttAAACCAAATTTTTCGACCTGGGAATCTTTGTTGCGTGGAATGGTTTTTGCCCCTTTTTTTT‑CCCAGTTAATTTTTTCCCCATTACTGTTTTTTGTGTTAGTCCCCGC‑AACGTAAACAAAATTTT‑CCCGGGGAGCAATGACTCCTTTTTCCTTT‑AATAATAAAATATCAATGCGGTCGCGCATTGATTTATCGAGAACATTCAGATTGAATTCGACCGCCATTGCGCAAGGCa < 2:709917/236‑1 (MQ=255) tttttttAAACCAAATTTATCGGCCAGTTAACTATTGATTCATGGAATGTTTTTGTCCCCCTTTTTTT‑CCCAGTTAATTTTTTGCCCATTCCTGATTTTTTTTTTATTCCCCGC‑AACGCTAACAAAATATT‑CCCCGGGGTCAATGCCTCCTTTTTCCTTT‑AATAATGAAATATCAATGCGGTCGCGCATTGATTTATCGAGAACATTCAGATTGAATTCGACCGCCATTGCGCAAGGCa < 2:648067/236‑1 (MQ=255) tGGTTTTAACCCAAATTTATCGACCAGTGAATCATTGATGCATGGAATGTTTTTGTCACCTTTTTTTG‑GCCATTTAATTTTTTGCCAATTACTGATTTTGTTGTTATTCCCCGA‑ACAGGTAACAAAATATT‑CCCCGGGAGCAATGACTCCTTTTTCCTTT‑AATAATGAAATATCAATGCGGTCGCGCATTGATTTATCGAGAACATTCAGATTGAATTCGACCGCCATTGCGCAAGGCa < 1:65635/239‑1 (MQ=255) ttAAACCAAATTTATCGACCAGTGAATCATTGATGCATGGAATGGTTTTGTCACCCTTTTTTT‑GCCAGTTAATTTTTTGCCCATTACTGATTTTGTTGTTATTCACCGC‑AACGCTAACAAAATATT‑CACCGGGAGCAATGACTCCTTTTTCCTTT‑AATAATGAAATATCAATGCGGTCGCGCATTGATTTATCGAGAACATTCAGATTGAATTCGACCCCCATTAACCAAGGCATCGcc > 2:558211/1‑239 (MQ=255) aaaCCAAATTTATCGACCAGTGAATCATTGATGCATGGAATGGTTTTGTCACCCTTTTTTT‑GCCAGTTAATTTTTTGCCCATTACTGATTTTGTTGTTATTCACCGC‑AACGCTAACAAAATATT‑CACCGGGAGCAATGACTCCTTTTTCCTTT‑AATAATGAAATATCAATGCGGTCGCGCATTGATTTATCGAGAACATTCAGATTGAATTCGACCGCCATTGCGCAAgg > 1:419477/1‑230 (MQ=255) aTTTATCGACCAGTGAATCATGGTGGCATGGAATGGTTTTGTCCCCCTTTTTTT‑GCCAGTTAATTTTTTGCCCATTACTGATTTTGTTGTTATTCACCGC‑AACGCTAACAAAATATT‑CACCGGGAGCAATGACTCCTTTTTCCTTT‑AATAATGAAATATCAATGCGGTCGCGCATTGATTTATCGAGAACATTCAGATTGAATTCGACCGCCATTGCGCAAGGCATCGCCATGACcagg < 1:81818/239‑1 (MQ=255) ttatgagacAGTGAATCATTGATGCATGGAATGGTTTTGTCCCCCTTTTTTT‑GGCAGTTAATTTTTTGCCATTTACTTATTTTGTTGTTTTGCACCGC‑AACGCTAAAAAAATATT‑CACCGGGAGCAATGACTCCTTTTTCCTTT‑AAAAATGAAATATCAATGCGGTCGCGCAGTGATTTGTCGAGAACATGCAAATGGAATTCGACCGCCATTGCGCAAGGCATCGCCATGACcaggca < 1:215425/231‑1 (MQ=255) gACCAGTGAATCATTGTTGCATGGTATGGTTTTGTCACCCTTTTTTT‑GCCATTTAATTTTTTGCCCATTACTGATTTTGTTGTTATTCACCGC‑AACCATAACAAAATATT‑CCCCGGGAGCATTGCCTCGTTTTGCCTTT‑AAGAATGAAATATCAATGCGGCCCCGCATTGATTTATCGAGAAAATTCAGATTGAATTCGACCGCCATTGCGCAAGGCATCGCCATGACCAGGCAGGATa < 1:14102/239‑1 (MQ=255) tGAATCATTGATGCATGGAATGGTTTTGTCACCCTTTTTTT‑GCCAGTTAATTTTTTGCCCATTACTGATTTTGTTGTTATTCACCGC‑AACGCTAACAAAATATT‑CACCGGGAGCAATGACTCCTTTTTCCTTT‑AATAATGAAATATCAATGCGGTCGCACATTGATTTATCGAGAACATTCAGATTGAATTCCACCGCCATTGCGCAAGGCATCGACATTACCAGGCAGGAAACaaaaa > 2:807936/1‑238 (MQ=255) tttgaTGGATTGTTTTTGTCTCCTTTTTTTT‑CCCATTTATTTTTTTGCCTTTTATGTGTTTTGTTTTTATTACCCAC‑ACCTCTAAAAAAATATG‑CACCGGGGTCAATGACTCCTTTTTCTTTT‑AATAAGGAAATATCAATGCGGTCGCGTATTGATTTATCGAAAACATTCAGATTAAATCGGACCGCCATTGCGCAAGGCATCGCCATGACCAGGCAGGATACAAAAGAGAGTCGATa < 2:726363/235‑1 (MQ=255) ctgattGGAATGTTTTTGTCCCCCTTTTTTT‑GCAAGTTATTTTTTTGCCAATTATTGATTTTGTTGTTATTCACCGC‑AACGCTAACAAAATATT‑CACCGGGAGCAATGACTCCTTTTTCCTTT‑AATAATGAAATATCAATGCGGTCCCGCATTGATTTATCGAGAACATTCAGATTGAATTCGACCGCCATTGCGCAAGGCATCGCCATGACCAGGCAGGATACAAAAGAGAGTCGATa < 1:229598/234‑1 (MQ=255) aTGCATGGAATGGTTTTGTCACCCTTTTTTT‑GCCAGTTAATTTTTTGCCCATTACTGATTTTGTTGTTATTCACCGC‑AACGCTAACAAAATATT‑CACCGGGAGCAATGACTCCTTTTTCCTTT‑AATAATGAAATATCAATGCGGTCGCGCATTGATTTATCGAGAACATTCAGATTGAATTCGACCGCCATTGCGCAAGGCATCGCCATGACCAGGCAGGATACAAAAGAGAGTCGATa > 1:69868/1‑239 (MQ=255) aTGCATGGAATGGTTTTGTCACCCTTTTTTT‑GCCAGTTAATTTTTTGCCCATTACTGATTTTGTTGTTATTCACCGC‑AACGCTAACAAAATATT‑CACCGGGAGCAATGACTCCTTTTTCCTTT‑AATAATGAAATATCAATGCGGTCGCGCATTGATTTATCGAGAACATTCAGATTGAATTCGACCGCCATTGCGCAAGGCATCGCCATGACCAGGCAGGATACAAAAGAGAGTCGATa > 1:809337/1‑239 (MQ=255) tttgTTTTTTCTCCCTTTTTTT‑GCCATTTAATTTTTTGCCCATTCAGGTTTTTGTTGTTATCCCCCGC‑AACGCAAAAAAAATATT‑CACCGGGAGAAATGACTCTTTTTCCCTAT‑AATAATAAAATAACAATGCGGTCGCGCATTAATTTACCGAGAACATTCAGATTGAATACGACCGCCATTGCGCAAGGCATCGCCATGACCAGGCAGGATACAAAAGAGAGTCGATAAATATTCAc < 2:429906/236‑1 (MQ=255) tGGTTTTTTCCCCCTTTTTTT‑GCCAGTTATTTTTTTGCCCATTACTGATTTGGTTGTTATTCCCCGA‑AACGTTAAAAAAATATT‑CACCGGGAGCAATGCCTCCTTTTTCCTTT‑AATAATGAAATATCAATGCGGTCGCGAATTGATTTATCGAGAACATTCAGATTGAATTCGACCGCCATTGCGCAAGGCATCGCCATGACCAGGCAGGATACAAAAGAGAGTCGATAAATATTCACg < 1:391064/239‑1 (MQ=255) tGGTTTTGTCCCCTTTTTTTT‑GCCAGTTAATTTTTTGCCAATTACTGATTTTGTTGTTATTCACCGA‑AACGCTAACAAAATATT‑CACCGGGATCAATGACTCCTTTTTCCTTT‑AATAATGAAATATCAATGCGGTCGCGCATTGATTTATCGAGAACATTCAGATTGAATTCGACCGCCATTGCGCAAGGCATCGCCATGACCAGGCAGGATACAAAAGAGAGTCGATAAATATTCACg < 1:803446/239‑1 (MQ=255) tGGTTTTGTCCCCCTTTTTTT‑GCCAGTTAATTTTTTGCCATTTACTAATTTTGTTGTTATTCACCCA‑AACCCTAAAAAAAAATT‑CACCGGGAGCAATGACTCCTTTTTCCTTT‑AATAAGGAAATATCAATGCGGTCGCGCATTGATTTATCGAAAACATTAAGATTGAATTCGACCGCCATTGCGCAAGGCATCGCCATGACCAGGCAGGATACAAAAGAGAGTCGATAAATATTCACg < 1:558211/239‑1 (MQ=255) tGGTTTTGTCCCCCTTTTTTT‑GCCAGTTAATTTTTTGCCAATTACTGATTTTTTTGTTATTCCCCGC‑AACGCTAACAAAATATT‑CCCCGGGAGCAATGACTCCTTTTTCCTTT‑AATAATGAAATATCAATGCGGTCGCGCATTGATTTATCGAGAACATTCAGATTGAATTCGACCGCCATTGCGCAAGGCATCGCCATGACCAGGCAGGATACAAAAGAGAGTCGATAAATATTCACg < 1:598699/239‑1 (MQ=255) ttataggTCCCCCTTTTTTTGGCCATTTATTTTTTTCCCATTTTCTGATTTGTTTTTTTTTCACACC‑AACGCTAAAAAAATATT‑CACGGGGGACAATGACTCTTTTTTCCTTT‑AAAAAAGAAATATCAAGGCGGTCGCGCATTGATTTATCGAAAACATCCAGATTGAATTCGACCGCCATTGCGCAAGGCATCGCCATGACCAGGCAGGATACAAAAGAGAGTCGATAAATATTCACg < 2:476835/233‑1 (MQ=255) gTTTTGTCCCCTTTTTTTT‑GCCAGTTAATTTTTTGCCCATTACTGATTTTGTTGTTATTCCCCGC‑AACGCTAAAAAAATTTT‑CACCGGGAGCAATGCCTCCTTTTTCCTTT‑AATAATGAAATATCAATGCGGTCGCGCATTGATTTATCGAGAACATTCAGATTGAATTCGACCGCCATTGCGCAAGGCATCGCCATGACCAGGCAGGATACAAAAGAGAGTCGATAAATATTCACg < 1:779655/237‑1 (MQ=255) tCACCCTTTTTTT‑GCCAGTTAATTTTTTGCCCATTACTGATTTTGTTGTTATTCACCGC‑AACGCTAACAAACTATT‑CACCGGGAGCATTGAATCCTTTTTCCTTT‑AATAATGAAATATCAATGCGGTCGCGCATTGATTTATCGAGAACATTCAGATTGAATTCGACCGCCATTGAGCAAGGCATCGCCATGACCCGGCCGGGGACAAAAGCGATTCGATAAAAATTACCGGGGTCCAt > 1:410958/1‑239 (MQ=255) tCACCCTTTTTTT‑GCCAGTTAATTTTTTGCCCATTACTGATTTTGTTGTTATTCACCGC‑AACGCTAACAAAATATT‑CACCGGGAGCAATGACTCCTTTTTCCTTT‑AATAATGAAATATCAATGCGGTCGCGCATTGATTTATCGAGAACATTCAGATTGAATTCGACCGCCATTGCGCAAGGCATCGCCATGACCAGGCAGGATACAAAAGAGAGTCGATAAATATTCACGGTGTCCa > 1:627751/1‑238 (MQ=255) tCACCCTTTTTTT‑GCCAGTTAATTTTTTGCCCATTACTGATTTTGTTGTTATTCACCGC‑AACGCTAACAAAATATT‑CACCGGGAGCAATGACTCCTTTTTCCTTT‑AATAATGAAATATCAATGCGGTCGCGCATTGATTTATCGAGAACATTCAGATTGAATTCGACCGCCATTGCGCAAGGCATCGCCATGACCAGGCAGGAAACAAAAGAGAGTCGAAAAAAATTccaggggcccaa > 2:274174/1‑228 (MQ=255) tcctttttttt‑tCCTTTTTATTTTTTCCCCTTTGCATTTTTTTTTGTTTTTCCCCCA‑AACGTTAAAAAAATTTT‑AACCGGGAACAAGTCCCTCTTTTTCCTTA‑AATAATGAAATATCAATGCGGCCCACAATTGATTTACCGGGAATATTCAGATTGAATTCGACCGCCATTGCGCAAGGCATCGCCATGACCAGGCAGGATACAAAAGAGAGTCGATAAATATTCACGGTGTCCATAc < 2:791171/235‑1 (MQ=255) tttt‑GCCAGTTAATTTTTTGCCAATTACTGATTTTGTTGTTATTCACCGA‑AACGCTAACAAAATATT‑CCCCGGGAGAAATGCCTCCTTTTTCCTTT‑AATAATGAAATATCAATGCGGTCGCGAATTGATTTATCGAGAACATTCAGATTGAATTCGACCGCCATTGCGCAAGGCATCGCCATGACCAGGCAGGATACAAAAGAGAGTCGATAAATATTCACGGTGTCCATACCTGATaa < 1:236609/239‑1 (MQ=255) ccAGTTAATTTTTTGCCCATTACTGATTTTGTTGTTATTCACCGC‑AACGCTAACAAAATATT‑CACCGGGAGCAATGACTCCTTTTTCCTTT‑AATAATGAAATATCAATGCGGTCGCGCATTGATTTATCGAGAACATTCAGATTGAATTCGACCGCCATTGCGCAAGGCATCGCCATGACCAGGCAGGATACAAAAGAAAGTCGATAAATATTCACGGTGTCCATAc > 1:476835/1‑227 (MQ=255) ttAATTTTTTGCCCATTACTGATTTTGTTGTTATTCACCGC‑AACGCTAACAAAATGTT‑CACCGGGCGCATTGACTCCTTTTTCCTTA‑AATAATGAAATATCAATGCGACCGCGCATTGATTTATCGAGACATTTCAGATTGAATTCGACCGCCATTGACCAAGGCATCGCAATGACCAGGCAGGCTACAAAAGAGAGTCGATAAGACTTCACGGTGCTAATACCTGATAAATATTTTAt > 2:620334/1‑239 (MQ=255) ttggCCAATTCCTGATTTTGTTGTTATTCACCGC‑AACGCTAACAAAATATT‑CCCCGGGAACAATGACTCCGTTTTCCTTT‑AATAATGAAATATCAATGCGGTCGCGCATTGATTTATCGAGAACATTCAGATTGAATTCGACCGCCATTGCGCAAGGCATCGCCATGACCAGGCAGGATACAAAAGAGAGTCGATAAATATTCACGGTGTCCATACCTGATAAATATTTTATGAAAggc < 1:97763/236‑1 (MQ=255) ttACTGATTTTGTTGTTATTCACCGC‑AACGCTAACAAAATATT‑CACCGGGAGCAATGACTCCTTTTTCCTTT‑AATAATGAAATATCAATGCGGTCGCGCATTGATTTATCGAGAACATTCAGATTGAATTCGACCGCCATTGCGCAAGGCATCGCCATGACCAGGCAGGATACAAAAGAGAGTCGATAAATATTCACGGTGTCCATACCTGATAAATATTTTATGAAAGGCGGCgatga > 1:179109/1‑239 (MQ=255) tACTGATTTTTTTGTTATTCACCGC‑AACGAAAACAAAATATT‑CCCCGGGAGCAATGACTCCTTGTTCCTTT‑AATAATGAAATATCAATGCGGTCGCGCATTGATTTAACGAGAACATTCAGATTGAATTCGACCGCCATTGCGCAAGGCATCGCCATGACCAGGCAGGATACAAAAGAGAGTCGATAAATATTCACg < 1:474268/197‑1 (MQ=255) ttttttttttATTTCCCGCAAACTCAAAAAAAATTTG‑CCCCGGGAGAAATATCTCGTTTTCCCTTA‑AATATGAAAAAATAAACGGGGCCGCGTATTATTTTAGCGAGAAGCTACAGATTGAATTCGACCGCCATTGCGCAAGGCATCGCCATGACCAGGCAGGATACAAAAGAGAGTCGATAAATATTCACGGTGTCCATACCTGATAAATATTTTATGAAAGGCGGCGATGATgccgc < 2:809337/239‑1 (MQ=255) ttgttgTTATTCACCGC‑AACGCTAACAAAATATT‑CACCGGGAGCAATGACTCCTTTTTCCTTT‑AATAATGAAATATCAATGCGGTCGCGCATTGATTTATCGAGAACATTCAGATTGAATTCGACCGCCATTGCGCAAGGCATCGCCATGACCAGGCAGGATACAAAAGAGAGTCGATAAATATTCACGGGGTCCATACCTGATAAATATTTTATGAAAAACGGCGATGATTCCCCCaa > 2:489498/1‑239 (MQ=255) aTTCCCCGC‑AACGCTAACAAAATATT‑CCCCGGGAGCAATGCCCCCTTTTACCTTT‑AATAATGAAATATCAATGCGGTCGCGCATTGATTTATCGAAAACATTCAGATTGAATTCGACCGCCATTGCGCAAGGCATCGCCATGACCAGGCAGGATACAAAAGAGAGTCGATAAATATTCACGGTGTCCATACCTGATAAATATTTTATGAAAGGCGGCGATGATGCCGCCAAAATAATAc < 1:489498/239‑1 (MQ=255) aTTCACCGC‑AACGCTAACAAAATATT‑CACCGGGAGCAATGACTCCTTTTTCCTTT‑AATAATGAAATATCAATGCGGTCGCGCATTGATTTATCGAGAACATTCAGATTGAATTCGACCGCCATTGCGCAAGGCATCGCCATGACCAGGCAGGATACAAAAGAGAGTCGATAAATATTCACGGTGTCCATACCTGATAAATATTTTATGAAAGGCGGCGATGATGCCGCCAAaataaa > 1:400445/1‑236 (MQ=255) cGC‑AACGCTAACAAAATATT‑CACCGGGAGCAATGACTCCTTTTTCCTTT‑AATAATGAAATATCAATGCGGTCGCGCATTGATTTATCGAGAACATTCAGATTGAATTCGACCGCCATTGCGCAAGGCATCGCCATGACCAGGCAGGATACAAAAGAGAGTCGATAAATATTCACGGGGTCCATACCTGATAAATATTTTATGAAAGGCGGCGATGATGCCGCCAAAATAATACttattt > 1:353453/1‑239 (MQ=255) caacctatAAAAAAATTTT‑C‑CCGGGGGGAAAGTATCTTTTTTCCTTTAAAAAATAAAATACAAATGCGGGCCCGAATGTATTTATGGAAAAAATCCAGTTAGAATTCAACCGCCATTGCGCAAGGCATCGCCATGACCAGGCAGGATACAAAAGAGAGTCGATAAATATTCACGGTGTCCATACCTGATAAATATTTTATGAAAGGCGGCGATGATGCCGCCAAAATAATACttattta < 2:179109/232‑1 (MQ=255) c‑AACGCTAACAAAATATT‑CACCGGGAGCAATGACTCCTTTTTCCTTT‑AATAATGAAATATCAATGCGGTCGCGCATTGATTTATCGAGAACATTCAGATTGAATTCGACCGCCATTGCGCAAGGCATCGCCATGACCAGGCAGGATACAAAAGAGAGTCGATAAATATTCACGGTGTCCATACCTGATAAATATTTTATGAAAGGCGGCGATGATGCCGCCAAAATACTACttatttat > 1:347550/1‑239 (MQ=255) cgtgaaaaaaaTATT‑CACCGGGAGCAATGCCTCTTTTTTCCTTT‑AATAATGAAATATAAATGCGGTGGCGGTTTGATTTATCGAAAACTTTCAGATTGAATTCGACCGCCATTGCGCAAGGCATCGCCATGACCAGGCAGGATACAAAAGAGAGTCGATAAATATTCACGGTGTCCATACCTGATAAATATTTTATGAAAGGCGGCGATGATGCCGCCAAAATAATACTTATTTATAAt < 1:274174/232‑1 (MQ=255) tAACAAAATATT‑CACCGGGAGCAATGCCTCCTTTTTCCTTT‑AATAATGAAATATCAATGCGGTCGCGCATTGATTTACCGAGAACATTCAGATTGAATTCGACCGCCATTGCGCAAGGCATCGCCATGACCAGGCAGGATACAAAAGAGAGTCGATAAATATTCACGGTGTCCATACCTGATAAATATTTTATGAAAGGCGGCGATGATGCCGCCAAAATAATACTTATTTATAATcc < 1:53658/238‑1 (MQ=255) aCAAAATATT‑CACCGGGAGCAATGAGTCCTTTTTCCTTT‑AATAATGAAATATCAATGCGGTCGCGCATTGATTTATCGAGAACATTCAGATTGAATTCGACCGCCATTGCGCAAGGCATCGCCATGACCAGCCAGGTTGAAAAAGAGAGCCGATAAAAATTCCAGGTTTCAATACCTGATAAATATTTTTTGCAAGGCGGCAATAATGCCCCCAAAATAAAATTTATTTTAAATCCaa > 2:147174/1‑237 (MQ=255) aCAAAATATT‑CACCGGGAGCAATGACTCCTTTTTCCTTT‑AATAATGAAATATCAATGCGGTCGCGCATTGATTTATCGAGAACATTCAGATTGAATTCGACCGCCATTGCGCAAGGCATCGCCATGACCAGGCAGGATACAAAAGAGAGTCGATAAAAATTCACGGTGTCCATACCTGATAAATATTTTATGAAAGGAGGCGATGATGCCGCCAAAAAAACACtttttttaataccaac > 2:831480/1‑229 (MQ=255) aaaaTATTACACCGGGAACAATGACTCATTTTTCCTTA‑AATAATGAAAATTCAAGGCGGTCGCGATTTGATTTACCGAGAACATTCATATTGAACTCGACCGCCATTGCGCAAGGCATCGCCATGACCAGGCAGGATACAAAAGAGAGTCGATAAATATTCACGGTGTCCATACCTGATAAATAGTTTATGAAAGGCGGCGATGATGCCGCCAAAATAATACTTATTTATAATCCAGCa < 1:620334/239‑1 (MQ=255) cACCGGGAGCAATGACTCCTTTTTCCTTT‑AATAATGAAATATCAATGCGGTCGCGCATTGATTTATCGAGAACATTCAGATTGAATTCGACCGCCATTGCGCAAGGCATCGCCATGACCAGCCAGGATACAAAAGCGAGTCGATAAATATTGACGGTGTCCTTACCTGATAACTATTTTATGAAAGCCGGCGTGGATGCGCCCAAACAAATACTTTTTTTTAAACCAGCAccacgggag > 2:773454/1‑231 (MQ=255) tGACTCCTTTTTCCTTT‑AATAATGAAATATCAATGCGGTCGCGCATTGATTTATCGAGAACATTCAGATTGAATTCGACCGCCATTGCGCAAGGCATCGCCATGACCAGGCAGGATACAAAAGAGAGTCGATAAATATTCACGGTGTCCATACCTGATAAATATTTTATGAAAGGCGGCGATGAGGCCGCCAAAATAATACTTATTTATAATCCAGCACGTAGGTTGCGTTAGCGGtt > 1:168916/1‑238 (MQ=255) ccTTTTTCCTTT‑AATAATGAAATATCAATGCGGTCGCGCATTGATTTATCGAGAACATTCAGATTGAATTCGACCGCCATTGCGCAAGGCATCGCCATGACCAGGCAGGATACAAAAGAGAGTCGATAAATATTCACGGTGTCCATACCTGATAAATATTTTATGAAAGGCGGCGATGATGCCGCCAAAATAATACTTATTTATAATCCAGCACGTAGGTTGCGTTAACGGTTACTTc > 1:869137/1‑238 (MQ=255) ttttCCTTT‑AATAATGAAATATCAATGCGGTCGCGCATTGATTTATCGAGAACATTCAGATTGAATTCGACCGCCATTGCGCAAGGCATCGCCATGACCAGGCAGGATACAACAGCGAGTCGATAAATATTCACGGTGTCCATACCTGATAAATATTTTATGAAAGGCGGCGATGATGCCGCCAAAATAATACTTATTTATAATCCAGCACGTAGGTTGCGTTAGCGGTTACTTAAcc > 1:397312/1‑238 (MQ=255) tCCTTT‑AAAAAAGAAATATGAGGGCGGTCGCGCTTTTATTTACGAAAAATATTAAGTTTATTTGCGCCCGCCATTGCGCAAGGCATCGCCATGACAAGGCAGAATAAAAAAGAGGGTCGATAAATATTCACGGTGCCCATACCTGAAAAATATTTTAGGAAAGGCGGCGATGATGCCGCAAAAAAAATCCTTATTTATAATCCAGCACGTAGGTTGCTTTAGCGGTTACTTCCCCTGcc < 2:869137/239‑1 (MQ=255) t‑aataaTGAAATATCAATGCGGTCGCGCATTGATTTATCGAGAACATTCAGATTGAATTCGACCGCCATTGCGCAAGGCATCGCCATGACCAGGCAGGATACAAAAGAGAGTCGATAAATATTCACGGTGTCCATACCTGATAAATATTTTAt > 1:114083/1‑153 (MQ=255) t‑aataaTGAAATATCAATGCGGTCGCGCATTGATTTATCGAGAACATTCAGATTGAATTCGACCGCCATTGCGCAAGGCATCGCCATGACCAGGCAGGATACAAAAGAGAGTCGATAAATATTCACGGTGTCCATACCTGATAAATATTTTATGAACGTCGGCGATGATGCCGCAAAAGTAATACTTATTTATAATCCAGCACGTAGGTTGCGTTAGCGGTTACTTCCCCTGCCGCGAc > 1:502066/1‑239 (MQ=255) t‑aataaTGAAATATCAATGCGGTCGCGCATTGATTTATCGAGAACATTCAGATTGAATTCGACCGCCATTGCGCAAGGCATCGCCATGACCAGGCAGGATACAAAAGAGAGTCGATAAATATTCACGGTGTCCATACCTGATAAATATTTTATGAAAGGCGGCGATGATGCCGCCAAAATAATACTTATTTATAATCCAGCACGTAGGTTGCGTTAGCGGTTACTTCACCTGCCGTGAc > 1:716318/1‑239 (MQ=255) t‑aataaTGAAATATCAATGCGGTCGCGCATTGATTTATCGAGAACATTCAGATTGAATTCGACCGCCATTGCGCAAGGCATCGCCATGACCAGGCAGGATACAAAAGAGAGTCGATAAATATTCACGGTGTCCATACCTGATAAATATTTTATGAAAGGCGGCGATGATGCCGCACAAATAATACTTATTTATAATCCAGCCCGTAGGTTCCGTTACGGGTGACTTCACCTGCCGTGAc > 1:254211/1‑239 (MQ=255) gTCGCGCATTGATTTATCGAGAATATTCAGCTTGAATTCGACCGCCATTGCGCAAGGCATCGCCATTACCAGGCAGGATACAAAAGAGAGTCGATAACTATTCACGGTGTCCATACCTGCTAAACATTTTATGAAAGCCGGCGATGATCCCGCCAAAATCATACTTATTTTTAATCTAGACCCTAGCTTGCGTTAGCGGTTACTTACCTTGCCGTCAGACCGACTGCattttgattttg > 2:614654/1‑239 (MQ=255) agaACATTCAGATTGAATTCGACCGCCATTGCGCAAGGCATCGCCATGACCAGGCAGGATACAAAAGAGAGTCGATAAATATTCACGGTGTCCATACCTGATAAATATTTTATGAAAGGCGGCGATGATGCCGCCAAAATAATACttattta > 1:136436/1‑152 (MQ=255) | ATACACCGATCTATCTGTGGCAAGGACTGACGGATATCTGGTTTTAAACCAAATTTATCGACCAGTGAATCATTGATGCATGGAATGGTTTTGTCACCCTTTTTTT‑GCCAGTTAATTTTTTGCCCATTACTGATTTTGTTGTTATTCACCGC‑AACGCTAACAAAATATT‑CACCGGGAGCAATGACTCCTTTTTCCTTT‑AATAATGAAATATCAATGCGGTCGCGCATTGATTTATCGAGAACATTCAGATTGAATTCGACCGCCATTGCGCAAGGCATCGCCATGACCAGGCAGGATACAAAAGAGAGTCGATAAATATTCACGGTGTCCATACCTGATAAATATTTTATGAAAGGCGGCGATGATGCCGCCAAAATAATACTTATTTATAATCCAGCACGTAGGTTGCGTTAGCGGTTACTTCACCTGCCGTGACATCGACTGCATTATCAATTTG > NC_000913/751847‑752303 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |