New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 309109785 (1.040)4 (0.050) 4/266 11.3 4.8% intergenic (+43/‑37) endA/rsmE DNA‑specific endonuclease I/16S rRNA m(3)U1498 methyltransferase, SAM‑dependent
?NC_000913 = 3091103 79 (1.040)intergenic (+49/‑31) endA/rsmE DNA‑specific endonuclease I/16S rRNA m(3)U1498 methyltransferase, SAM‑dependent
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

TCCGGTTACCGACTGGGAGTGCGAGCGCGATGAACGCATCGCGAAGGTGCAGGGCAATCATAACCCGTATGTGCAACGCGCTTGCCAGGCGCGAAAGAGCTAACCTACACTAGCGGGATTCTTTTTGTTAACCCCTACCCCACGCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_000913/3090952‑3091097
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccccacgcgGTTGTACGCGTGGGGTAGGGGTTAACAAAAAGAATCCCGCTAGTGTAGGTTAGCTCTTTCGCGCCTGGCAAGCGCGTTGCACATACGGGTTATGATTGCCCTGCACCTTCGCGATGCGTTCATCGCGCTCGCACTCCCAG  <  NC_000913/3091103‑3090964
                                                                                                                                                                                                                                                                                              
TCCGGTCACCGACTGGGAGTGCGAGCGCGATGAACGCATCGCGAAGGTGCAGGGCAATCATAACCCGTATGTGCAACGCGCTTGCCAGGCGCGAAAGAGCTAACCTTCACTAGCGGGATTCTTTTTGTTAACCCCTACCCCAC                                                                                                                                                 <  2:1372452/143‑1
   GGTTACCGACTGGGAGTGCGAGCGCGATGAACGCATCGCGAAGGTGCAGGGCAATCATAACCCGTATGTGCAACGCGCTTGCCAGGCGCGAAAGAGCTAACCTACACTAGCGGGATTCTTTTTGTTAACCCCTACCCCACGCG                                                                                                                                              >  2:1073637/1‑143
                 ggtggggGCGCGTTGAACGCATCGCGAAGGTGCAGGGCCATCATAACCCGTATGTGCAACGCGCTTGCCAGGCGCGAAAGCGCTAACCTACACTAGCGGGATTCTTTTTGTTAACCCCTACCCCACGCGGTTGTACGCGTGGG                                                                                                                                <  2:420739/136‑1
                              TGAACGCATCGCGCAGGTGCAGGGCAATCATACCCCGTATGTGCAACGCGCTTGCCAGGCGCGAAAGAGCTAACCTACACTAGCGGGATTCTTTTTGTTAACCCCTACCCCACGCGGTTGTACGCGTGGGGTAGGGGTTAACA                                                                                                                   <  2:919833/143‑1
                                       CGCGAAGGTGCAGGGCAATCATAACCCGTATGTGCAACGCGCTTGCCAGGCGCGAAAGAGCTAACCTACACTAGCGGGATTCTTTTTGTTAACCCCTACCCCACGCGGTTGTACGCGTGGGGTAGGGGTTAACAAAAAGAATC                                                                                                          <  1:985432/143‑1
                                           AAGGTGCAGGGCAATCATAACCCGTATGTGCAACGCGCTTGCCAGGCGCGAAAGAGCTAACCTACACTAGCGGGATTCTTTTTGTTAACCCCTACCCCACGCGGTTGTACGCGTGGGGTAGGGGTTAACAAAAAGAATCCCGC                                                                                                      <  1:1394891/143‑1
                                                                                                                                           CCACGGGGTGGTGCGCGTGGGGCAGGGGTTAACAAGAAGAAGCCCGCTAGTGTAGGTTAGCTCTTTCGCGCCTGGCAAGCGCGTTGCACATACGGGTTATGATTGCCCTGCACCTTCGCGATGCGTTCATCGCGCTCGCACTC      <  1:867194/143‑1
                                                                                                                                           CCACGCGGTTGTACGCGTGGGGTAGGGGTTAACAAAAAGAATCCCGCTAGTGTAGGTTAGCTCTTTCGCGCCTGGCAAGCGCGTTGCACATACGGGTTATGATTGCCCTGCACCTTCGCGACGCGTTCATCGGGCTCGCACTC      >  2:658134/1‑143
                                                                                                                                            CACGCGGTTGTACGCGTGGGGTAGGGGTTAACAAAAAGAATCCCGCTAGTGTAGGTTAGCTCTTTCGCGCCTGGCAAGCGCGTTGCACATACGGGTTATGATTGCCCTGCACCTTCGCGATGCGTTCATCGCGCTCGCACTCC     >  1:357012/1‑143
                                                                                                                                               GCGGTTGTACGCGTGGGGTAGGGGTTAACAAAAAGAATCCCGCTAGTGTAGGTTAGCTCTTTCGCGCCTGGCAAGCGCGTTGCACATACGGGTTATGATTGCCCTGCACCTTCGCGATGCGTTCATCGCGCTCGCACTCCCAG  >  1:457584/1‑143
                                                                                                                                                                                                                                                                                              
TCCGGTTACCGACTGGGAGTGCGAGCGCGATGAACGCATCGCGAAGGTGCAGGGCAATCATAACCCGTATGTGCAACGCGCTTGCCAGGCGCGAAAGAGCTAACCTACACTAGCGGGATTCTTTTTGTTAACCCCTACCCCACGCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_000913/3090952‑3091097
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccccacgcgGTTGTACGCGTGGGGTAGGGGTTAACAAAAAGAATCCCGCTAGTGTAGGTTAGCTCTTTCGCGCCTGGCAAGCGCGTTGCACATACGGGTTATGATTGCCCTGCACCTTCGCGATGCGTTCATCGCGCTCGCACTCCCAG  <  NC_000913/3091103‑3090964

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.